BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00008878
         (1937 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010250454.1| PREDICTED: DNA repair protein recA homolog 3...   559   e-156
ref|XP_010909692.1| PREDICTED: DNA repair protein recA homolog 3...   549   e-153
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   543   e-151
ref|XP_011623481.1| PREDICTED: DNA repair protein recA homolog 3...   521   e-144
ref|XP_011077996.1| PREDICTED: DNA repair protein recA homolog 3...   519   e-144
gb|KHG09097.1| hypothetical protein F383_14543 [Gossypium arboreum]   517   e-143
gb|KJB83056.1| hypothetical protein B456_013G227300 [Gossypium r...   516   e-143
ref|XP_012464696.1| PREDICTED: DNA repair protein recA homolog 3...   516   e-143
ref|XP_006645183.1| PREDICTED: DNA repair protein recA homolog 3...   516   e-143
ref|XP_009393776.1| PREDICTED: DNA repair protein recA homolog 3...   514   e-143
ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group] g...   514   e-142
ref|XP_009393777.1| PREDICTED: DNA repair protein recA homolog 3...   512   e-142
ref|XP_009631927.1| PREDICTED: DNA repair protein recA homolog 3...   511   e-142
ref|XP_009352672.1| PREDICTED: DNA repair protein recA homolog 3...   507   e-140
ref|XP_007012807.1| RecA DNA recombination family protein [Theob...   507   e-140
ref|XP_010909693.1| PREDICTED: DNA repair protein recA homolog 3...   506   e-140
ref|XP_009785381.1| PREDICTED: DNA repair protein recA homolog 3...   506   e-140
ref|XP_008337714.1| PREDICTED: DNA repair protein recA homolog 3...   506   e-140
ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3...   506   e-140
gb|ERN06347.1| hypothetical protein AMTR_s00016p00242650 [Ambore...   505   e-140

>ref|XP_010250454.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Nelumbo
            nucifera]
          Length = 425

 Score =  559 bits (1441), Expect = e-156
 Identities = 300/412 (72%), Positives = 331/412 (80%), Gaps = 4/412 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAEC--FTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXX 1558
            MA+ L     +++SL  AE   + +GILG +    NFS KG+R                 
Sbjct: 1    MAKLLRNVYTLRRSLMIAEIQNYRQGILGISSQCCNFSSKGKRKSRSDGSDSGEENISKK 60

Query: 1557 ELALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIY 1378
            +LALQQA+DQITTSFGKG+IMWLGRS+ PR+VPVVSTGSF+LD+ALGIGGLPKGRV+EIY
Sbjct: 61   DLALQQALDQITTSFGKGAIMWLGRSVSPRHVPVVSTGSFALDMALGIGGLPKGRVIEIY 120

Query: 1377 GPEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQA 1198
            GPEASGKTTL LHVIAESQKHGGYCVFVDAEHALDPALAEA+GVKT+NLLL+QPDCGEQA
Sbjct: 121  GPEASGKTTLALHVIAESQKHGGYCVFVDAEHALDPALAEAVGVKTENLLLSQPDCGEQA 180

Query: 1197 LSLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLS 1018
            LSLVDTLIRSG           ALVPKSELDGEMGDAHMA+QARLMSQALRKL HSLSLS
Sbjct: 181  LSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 1017 QTILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQV 841
            QTILIFINQVRSKLSTF GFGGP EVTSGGNALKFYASVRL+IKR GLVKKGEE +GSQV
Sbjct: 241  QTILIFINQVRSKLSTFGGFGGPIEVTSGGNALKFYASVRLNIKRTGLVKKGEETIGSQV 300

Query: 840  LVKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGR 661
            LVKIVKNKH+PPFKTAQFELEFGKGICR SEIIELGCKHK+ITKAGGAFY+ NGQ+FRG+
Sbjct: 301  LVKIVKNKHAPPFKTAQFELEFGKGICRYSEIIELGCKHKFITKAGGAFYNFNGQNFRGK 360

Query: 660  DAIKRYFAENEGAXXXXXXXXXXXLVHHGTE-KKDPDTETPETPDASESEEI 508
            DAIKRY +ENE             L+H  T  +KD +T    TPD   SEEI
Sbjct: 361  DAIKRYLSENEDCLEELMAKLREKLMHIETNIEKDSET---GTPDGDASEEI 409


>ref|XP_010909692.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X1 [Elaeis guineensis]
          Length = 417

 Score =  549 bits (1414), Expect = e-153
 Identities = 287/389 (73%), Positives = 314/389 (80%), Gaps = 1/389 (0%)
 Frame = -3

Query: 1671 FTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXELALQQAIDQITTSFGKGSIMW 1492
            + +G +G+ F   NFS  GRR                 ++ALQQA+DQIT SFGKG+IMW
Sbjct: 16   YRQGFVGSTFQFCNFSAGGRRKSKSDGSESSEESLSKKDVALQQALDQITASFGKGAIMW 75

Query: 1491 LGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGPEASGKTTLGLHVIAESQKHG 1312
            LGRS   R VPVVSTGSFSLD+ALGIGGLPKGRVVEIYGPEASGKTTL LHVIAE+QK G
Sbjct: 76   LGRSHSRREVPVVSTGSFSLDLALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKAG 135

Query: 1311 GYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXX 1132
            GYC FVDAEHALDP+LAE IGVKTDNLLL+QPDCGEQALSLVDTLIRSG           
Sbjct: 136  GYCAFVDAEHALDPSLAETIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 195

Query: 1131 ALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQTILIFINQVRSKLSTF-GFGG 955
            ALVPKSELDGEMGDAHMALQARLMSQALRKL HSLSLSQTILIFINQVRSKLSTF GFGG
Sbjct: 196  ALVPKSELDGEMGDAHMALQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGG 255

Query: 954  PTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVKIVKNKHSPPFKTAQFELEF 775
            PTEVTSGGNALKFYASVRL+IKRIGLVKKGEE VGSQVLVKIVKNKH+PPFKT QFELEF
Sbjct: 256  PTEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTVQFELEF 315

Query: 774  GKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAIKRYFAENEGAXXXXXXXXX 595
            GKGI RDSE+IELGCKHK+ITK GGAFY +NG SFRG+DAIKRYF ENEGA         
Sbjct: 316  GKGISRDSEVIELGCKHKFITKGGGAFYSLNGHSFRGKDAIKRYFVENEGAREELMMKLK 375

Query: 594  XXLVHHGTEKKDPDTETPETPDASESEEI 508
              ++H   +K++P++   + PD   +EEI
Sbjct: 376  EKILHGTEKKQEPES---QVPDGDPTEEI 401


>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Vitis
            vinifera] gi|297738654|emb|CBI27899.3| unnamed protein
            product [Vitis vinifera]
          Length = 421

 Score =  543 bits (1398), Expect = e-151
 Identities = 286/415 (68%), Positives = 323/415 (77%), Gaps = 9/415 (2%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MAR L   + ++ SL++ E F +G+LGT+    NFS KGRR                 EL
Sbjct: 1    MARLLRNASSLRHSLFAVEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKEL 60

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+QA+DQITTSFGKGSIMWLGRS+  ++VPVVSTGSF+LDI LGIGGLPKGRVVEIYGP
Sbjct: 61   ALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGP 120

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAE+QK GGYCVFVDAEHALDPALAEAIGV T NLLL+QPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALS 180

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 1011 ILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLV 835
            ILIFINQVR+KLSTF GFGGPTEVT GGNALKFYASVRL+IKRIGLVKKGEE +GSQVLV
Sbjct: 241  ILIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQVLV 300

Query: 834  KIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDA 655
            K+VKNKH+PPFKTAQFELEFGKGICR+SEI+ELGCKHK+I K GGA Y  NGQSFRG+DA
Sbjct: 301  KVVKNKHAPPFKTAQFELEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDA 360

Query: 654  IKRYFAENEGAXXXXXXXXXXXLVHHGTEKKDPDTETPE--------TPDASESE 514
            IK++ ++NE             LV    ++K+ + E  +         PD ++ E
Sbjct: 361  IKQFLSQNESEREELMRKLREKLVGETNKEKELEAEAVDEDIAEGTVPPDTTDEE 415


>ref|XP_011623481.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X1 [Amborella trichopoda]
          Length = 434

 Score =  521 bits (1341), Expect = e-144
 Identities = 276/406 (67%), Positives = 319/406 (78%), Gaps = 1/406 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MAR LLRNA  K SL+S E    GI+G  F +RNF+ KG++                 E+
Sbjct: 1    MAR-LLRNAWYKYSLFSHEASVRGIVGGTFQLRNFAAKGKKKSKSDGSDSSEDKLSDKEV 59

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+ A+DQIT+SFG  +IMWLGR  GPR VPVVSTGSFSLD+ALGIGGLPKGRVVEIYGP
Sbjct: 60   ALKAALDQITSSFGNEAIMWLGRCTGPRYVPVVSTGSFSLDLALGIGGLPKGRVVEIYGP 119

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAE+QK+G YCVFVDAEHALDPALAE+IGVKT+NLLL+QPDCGEQALS
Sbjct: 120  EASGKTTLALHVIAEAQKYGAYCVFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALS 179

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPKSEL+GEMGDAHMA+QARLMSQALRKL HSLS SQT
Sbjct: 180  LVDTLIRSGSVDVVVVDSVAALVPKSELEGEMGDAHMAVQARLMSQALRKLSHSLSRSQT 239

Query: 1011 ILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLV 835
            ILIFINQVR+KLSTF GFGGPTEVTSGGNALKFYASVRL+IKRIG +KKGEE +GSQVLV
Sbjct: 240  ILIFINQVRAKLSTFGGFGGPTEVTSGGNALKFYASVRLNIKRIGFIKKGEEIIGSQVLV 299

Query: 834  KIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDA 655
            K+VKNKH+PPFKTA+FELEFGKGI RD+EI++LGCKH++ITKA G+F+ +NGQ+F G+DA
Sbjct: 300  KVVKNKHAPPFKTAEFELEFGKGISRDAEILDLGCKHRFITKA-GSFFRLNGQTFHGKDA 358

Query: 654  IKRYFAENEGAXXXXXXXXXXXLVHHGTEKKDPDTETPETPDASES 517
            IK Y  EN              L+ H  +++  +  + E    +ES
Sbjct: 359  IKTYLRENLDVSEDLCTKLKEKLLQHEHDEESEEPTSQEGVSPAES 404


>ref|XP_011077996.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Sesamum
            indicum]
          Length = 423

 Score =  519 bits (1337), Expect = e-144
 Identities = 270/372 (72%), Positives = 310/372 (83%), Gaps = 2/372 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLY-SAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXE 1555
            MAR L  ++ +++SL+   +   +G+L T+  +R+FS KGRR                 +
Sbjct: 1    MARLLRSSSCLRRSLFPQLQESRKGVLETSTQLRDFSTKGRRKSKSDASDSGEENMSKKD 60

Query: 1554 LALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYG 1375
            LAL+ A+DQIT SFGKGSIMWLGRS+ PR  PVVSTGSF+LDIALGIGGLPKGRVVEIYG
Sbjct: 61   LALKLALDQITASFGKGSIMWLGRSVAPRQTPVVSTGSFALDIALGIGGLPKGRVVEIYG 120

Query: 1374 PEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQAL 1195
            PEASGKTTL LHVIAE+QK GGYCVFVDAEHALDPALAEAIGV T+NLLL+QPDCGEQAL
Sbjct: 121  PEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTENLLLSQPDCGEQAL 180

Query: 1194 SLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQ 1015
            SLVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQ
Sbjct: 181  SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 1014 TILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVL 838
            TILIF NQVRSKLSTF GFGGPTEVT GGNALKFYASVRL+IKR GLVKKGEE VGSQV+
Sbjct: 241  TILIFTNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRTGLVKKGEETVGSQVV 300

Query: 837  VKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRD 658
            VKIVKNKH+PPFKTA+FELEFG+GICR++E+I+LGCKHK+ITKA GA+++M+ QSF+G+D
Sbjct: 301  VKIVKNKHAPPFKTAEFELEFGRGICREAELIDLGCKHKFITKA-GAYFYMDNQSFQGKD 359

Query: 657  AIKRYFAENEGA 622
            A+KR+ A+N  A
Sbjct: 360  ALKRFLADNVSA 371


>gb|KHG09097.1| hypothetical protein F383_14543 [Gossypium arboreum]
          Length = 419

 Score =  517 bits (1332), Expect = e-143
 Identities = 267/370 (72%), Positives = 298/370 (80%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MARFL   + +K S ++ +    G+LG+   + NFS KGRR                 +L
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENISKKDL 60

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+QA+DQIT+SFGKGSIMWLGRS  PRNVPVVSTGSF+LD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAE+QK GGYCVFVDAEHALDPALAE IGV T+NLLL+QPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 1011 ILIFINQVRSKLSTFGFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVK 832
            ILIFINQVRSKLSTFGFGGPTEVT GGNALKFYASVRL+I+R GLVKKGEE +GSQVLVK
Sbjct: 241  ILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 831  IVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAI 652
            +VKNKH+PPFK A+FELEFGKGICR+ EII L  KHK++TKA G+FY  N Q   G++A 
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKA-GSFYTFNDQKIHGKEAF 359

Query: 651  KRYFAENEGA 622
            K +  ENE A
Sbjct: 360  KNFLVENESA 369


>gb|KJB83056.1| hypothetical protein B456_013G227300 [Gossypium raimondii]
          Length = 419

 Score =  516 bits (1329), Expect = e-143
 Identities = 266/370 (71%), Positives = 298/370 (80%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MARFL   + +K S ++ +    G+LG+   + NFS KGRR                 +L
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDL 60

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+QA+DQIT+SFGKGSIMWLGRS  PRNVPVVSTGSF+LD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAE+QK GGYCVFVDAEHALDPALAE IGV T+NLLL+QPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVTALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 1011 ILIFINQVRSKLSTFGFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVK 832
            ILIFINQVRSKLSTFGFGGPTEVT GGNALKFYASVRL+I+R GLVKKGEE +GSQVLVK
Sbjct: 241  ILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 831  IVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAI 652
            +VKNKH+PPFK A+FELEFGKGICR+ EII L  KHK++TKA G+FY  N Q   G++A 
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKA-GSFYTFNDQKIHGKEAF 359

Query: 651  KRYFAENEGA 622
            K +  +NE A
Sbjct: 360  KNFLVQNESA 369


>ref|XP_012464696.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Gossypium raimondii] gi|763816203|gb|KJB83055.1|
            hypothetical protein B456_013G227300 [Gossypium
            raimondii]
          Length = 419

 Score =  516 bits (1329), Expect = e-143
 Identities = 266/370 (71%), Positives = 298/370 (80%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MARFL   + +K S ++ +    G+LG+   + NFS KGRR                 +L
Sbjct: 1    MARFLRNISHLKHSFHAPQICRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDL 60

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+QA+DQIT+SFGKGSIMWLGRS  PRNVPVVSTGSF+LD+ALGIGGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 120

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAE+QK GGYCVFVDAEHALDPALAE IGV T+NLLL+QPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALS 180

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 1011 ILIFINQVRSKLSTFGFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVK 832
            ILIFINQVRSKLSTFGFGGPTEVT GGNALKFYASVRL+I+R GLVKKGEE +GSQVLVK
Sbjct: 241  ILIFINQVRSKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVK 300

Query: 831  IVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAI 652
            +VKNKH+PPFK A+FELEFGKGICR+ EII L  KHK++TKA G+FY  N Q   G++A 
Sbjct: 301  VVKNKHAPPFKNAEFELEFGKGICREGEIINLATKHKFVTKA-GSFYTFNDQKIHGKEAF 359

Query: 651  KRYFAENEGA 622
            K +  +NE A
Sbjct: 360  KNFLVQNESA 369


>ref|XP_006645183.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Oryza brachyantha]
          Length = 426

 Score =  516 bits (1329), Expect = e-143
 Identities = 265/370 (71%), Positives = 304/370 (82%), Gaps = 6/370 (1%)
 Frame = -3

Query: 1719 LLRNAPIKQSLYSA-----ECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXE 1555
            LLR A +++++ +A     E + +G+ G+ FH R FS K ++                 +
Sbjct: 4    LLRRASLRRAIAAAAVSCPESYKQGVCGSTFHCRYFSSKAKKKVKPSGTDSGEENLSKKD 63

Query: 1554 LALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYG 1375
            LAL QAIDQIT++FGKG+IMWLGRS G R VPVVSTGSFSLD+ALGIGGLPKGRV+E+YG
Sbjct: 64   LALHQAIDQITSAFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPKGRVIEVYG 123

Query: 1374 PEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQAL 1195
            PEASGKTTL LHVIAE+QK+GGYC FVDAEHALDPALAE+IGV T+NLLL+QPDCGEQAL
Sbjct: 124  PEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVNTNNLLLSQPDCGEQAL 183

Query: 1194 SLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQ 1015
            SLVDTLIRSG           ALVPKSELDGEMGDAH+ALQARLMSQALRKL HSLSLSQ
Sbjct: 184  SLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLSLSQ 243

Query: 1014 TILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVL 838
            TIL+FINQ+RSK++TF GFGGP EVTSGGNALKFYASVR++IKRIGLVKKGEE +GSQVL
Sbjct: 244  TILLFINQIRSKVTTFGGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETIGSQVL 303

Query: 837  VKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRD 658
            VKIVKNKH+PPFKTAQFELEFGKGICR SE+IELG KHK + K GGAFY  N +S+RG+D
Sbjct: 304  VKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYRGKD 363

Query: 657  AIKRYFAENE 628
            A+K Y  ENE
Sbjct: 364  ALKSYLNENE 373


>ref|XP_009393776.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X1 [Musa acuminata subsp. malaccensis]
          Length = 426

 Score =  514 bits (1325), Expect = e-143
 Identities = 267/369 (72%), Positives = 301/369 (81%), Gaps = 1/369 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MARFL R A  K+ L+S E + +G+LGT F + NFS KG                   +L
Sbjct: 1    MARFL-RIASPKRCLFSTEVYKQGVLGTLFQLCNFSSKGGGKSKSNGSGSGEDNISKKDL 59

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            ALQQA+DQIT  FG G+IMWLGRS  PR VPVVSTGSF+LDIALGIGGLPKGRVVEIYG 
Sbjct: 60   ALQQALDQITAQFGTGAIMWLGRSHAPREVPVVSTGSFALDIALGIGGLPKGRVVEIYGS 119

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAESQK+GGYC FVDAEHALDP+LAE+IGVKT+NLLL+QPDCGEQAL+
Sbjct: 120  EASGKTTLALHVIAESQKNGGYCAFVDAEHALDPSLAESIGVKTENLLLSQPDCGEQALN 179

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPKSELDG+MGD HMALQARLMSQALRKL HSLSLSQT
Sbjct: 180  LVDTLIRSGAVDVVVVDSVAALVPKSELDGDMGDVHMALQARLMSQALRKLSHSLSLSQT 239

Query: 1011 ILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLV 835
            IL+F+NQVRSKLSTF GF GPTEVT GGNALKFYASVRL+ K  GL+KKGEE +G+Q++V
Sbjct: 240  ILLFVNQVRSKLSTFGGFKGPTEVTCGGNALKFYASVRLNTKIAGLIKKGEEVLGTQIMV 299

Query: 834  KIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDA 655
            KIVKNKH+PPFK  Q ELEFGKGI RDSE+IELGCKH++ITK G A+Y +NGQ+F G+DA
Sbjct: 300  KIVKNKHAPPFKEVQLELEFGKGISRDSEVIELGCKHQFITKTGVAYYCLNGQNFHGKDA 359

Query: 654  IKRYFAENE 628
            +KRYFAENE
Sbjct: 360  LKRYFAENE 368


>ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
            gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza
            sativa Japonica Group] gi|56784869|dbj|BAD82109.1|
            putative recA protein [Oryza sativa Japonica Group]
            gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa
            Japonica Group] gi|222619696|gb|EEE55828.1| hypothetical
            protein OsJ_04434 [Oryza sativa Japonica Group]
          Length = 429

 Score =  514 bits (1323), Expect = e-142
 Identities = 265/373 (71%), Positives = 301/373 (80%), Gaps = 9/373 (2%)
 Frame = -3

Query: 1719 LLRNAPIKQSLYSA--------ECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXX 1564
            LLR A +++++ +         E + +GI G+ FH R FS K ++               
Sbjct: 4    LLRRASLRRAVAAVAAAAAPCPESYKQGICGSTFHCRYFSSKAKKKTKSSGTDSGEENLS 63

Query: 1563 XXELALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVE 1384
              +LAL QAIDQIT++FGKG+IMWLGRS G R VPVVSTGSFSLD+ALG GGLPKGRV+E
Sbjct: 64   KKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVSTGSFSLDLALGTGGLPKGRVIE 123

Query: 1383 IYGPEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGE 1204
            +YGPEASGKTTL LHVIAE+QKHGGYC FVDAEHALDPALAE+IGV T NLLL+QPDCGE
Sbjct: 124  VYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALDPALAESIGVNTSNLLLSQPDCGE 183

Query: 1203 QALSLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLS 1024
            QALSLVDTLIRSG           ALVPKSELDGEMGDAH+ALQARLMSQALRKL HSLS
Sbjct: 184  QALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLS 243

Query: 1023 LSQTILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGS 847
            LSQTIL+FINQ+RSK++TF GFGGP EVTSGGNALKFYASVR++IKRIGLVKKGEE +GS
Sbjct: 244  LSQTILLFINQIRSKVTTFGGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETIGS 303

Query: 846  QVLVKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFR 667
            QVLVKIVKNKH+PPFKTAQFELEFGKGICR SE+IELG KHK + K GGAFY  N +S+R
Sbjct: 304  QVLVKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYR 363

Query: 666  GRDAIKRYFAENE 628
            G+DA+K Y  ENE
Sbjct: 364  GKDALKSYLNENE 376


>ref|XP_009393777.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X2 [Musa acuminata subsp. malaccensis]
          Length = 425

 Score =  512 bits (1318), Expect = e-142
 Identities = 267/369 (72%), Positives = 301/369 (81%), Gaps = 1/369 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MARFL R A  K+ L+S E + +G+LGT F + NFS KG +                  L
Sbjct: 1    MARFL-RIASPKRCLFSTEVYKQGVLGTLFQLCNFSSKGGKSKSNGSGSGEDNISKKD-L 58

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            ALQQA+DQIT  FG G+IMWLGRS  PR VPVVSTGSF+LDIALGIGGLPKGRVVEIYG 
Sbjct: 59   ALQQALDQITAQFGTGAIMWLGRSHAPREVPVVSTGSFALDIALGIGGLPKGRVVEIYGS 118

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAESQK+GGYC FVDAEHALDP+LAE+IGVKT+NLLL+QPDCGEQAL+
Sbjct: 119  EASGKTTLALHVIAESQKNGGYCAFVDAEHALDPSLAESIGVKTENLLLSQPDCGEQALN 178

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPKSELDG+MGD HMALQARLMSQALRKL HSLSLSQT
Sbjct: 179  LVDTLIRSGAVDVVVVDSVAALVPKSELDGDMGDVHMALQARLMSQALRKLSHSLSLSQT 238

Query: 1011 ILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLV 835
            IL+F+NQVRSKLSTF GF GPTEVT GGNALKFYASVRL+ K  GL+KKGEE +G+Q++V
Sbjct: 239  ILLFVNQVRSKLSTFGGFKGPTEVTCGGNALKFYASVRLNTKIAGLIKKGEEVLGTQIMV 298

Query: 834  KIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDA 655
            KIVKNKH+PPFK  Q ELEFGKGI RDSE+IELGCKH++ITK G A+Y +NGQ+F G+DA
Sbjct: 299  KIVKNKHAPPFKEVQLELEFGKGISRDSEVIELGCKHQFITKTGVAYYCLNGQNFHGKDA 358

Query: 654  IKRYFAENE 628
            +KRYFAENE
Sbjct: 359  LKRYFAENE 367


>ref|XP_009631927.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial
            [Nicotiana tomentosiformis]
          Length = 423

 Score =  511 bits (1317), Expect = e-142
 Identities = 271/408 (66%), Positives = 312/408 (76%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAE--CFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXX 1558
            MAR LLR A   ++  S++  C    + G    +  FS +G++                 
Sbjct: 1    MAR-LLRTATSLRTYLSSQPHCLRRSLFGALDQLCYFSSRGKKKSNSDGSDSGEENLSKK 59

Query: 1557 ELALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIY 1378
            +LAL+QA+DQITTSFGKGSIMWLGR++ P+ VPVVSTGSFSLD ALGIGGLPKGRV+EIY
Sbjct: 60   DLALKQALDQITTSFGKGSIMWLGRAVSPKQVPVVSTGSFSLDTALGIGGLPKGRVIEIY 119

Query: 1377 GPEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQA 1198
            GPEASGKTTL LHVIAE+QK GGYC FVDAEHAL+PALAEAIGV T+NLLL+QPDCGEQA
Sbjct: 120  GPEASGKTTLALHVIAEAQKQGGYCCFVDAEHALNPALAEAIGVNTENLLLSQPDCGEQA 179

Query: 1197 LSLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLS 1018
            LSLVDT+IRSG           ALVPK EL+GEMGDAHMA+QARLMSQALRKL HSLSLS
Sbjct: 180  LSLVDTIIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS 239

Query: 1017 QTILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQV 841
            QTILIFINQVRSKLSTF GFGGPTEVT GGNALKFYASVRL+IKRIGLVKKGEE +GSQV
Sbjct: 240  QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQV 299

Query: 840  LVKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGR 661
            LVKIVKNKH+PPF+TA+FELEFGKGI R++E+I+LG KHK ITK GG +Y +N QS RGR
Sbjct: 300  LVKIVKNKHAPPFRTAEFELEFGKGISREAELIDLGVKHKLITKGGGGYYSINNQSLRGR 359

Query: 660  DAIKRYFAENEGAXXXXXXXXXXXLVHHGTEKKDPDTETPETPDASES 517
            DA+K + AEN+ A           L  HG ++K  D E+       E+
Sbjct: 360  DAVKHFLAENDSAREDLMMKLREKLWDHGDKEKGSDVESIHVDPVEEA 407


>ref|XP_009352672.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Pyrus x bretschneideri]
          Length = 420

 Score =  507 bits (1305), Expect = e-140
 Identities = 268/371 (72%), Positives = 300/371 (80%), Gaps = 1/371 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MAR L     +K+ L+  +    GILGT+    NFS KGR+                 EL
Sbjct: 1    MARLLRNGFSMKRFLFPPQVNQRGILGTSTQFCNFSSKGRKKSKSDGSDSCDENLSKKEL 60

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+QA+DQIT+SFGKGSIMWLGRS+ PR VPVVSTGSFSLDIALGIGG PKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSVSPRQVPVVSTGSFSLDIALGIGGFPKGRVVEIYGP 120

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAESQK GG CVFVDAEHALDP LA++IGV T+NLLL+QPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAESQKQGGTCVFVDAEHALDPTLAQSIGVNTENLLLSQPDCGEQALS 180

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVIDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 1011 ILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLV 835
            ILIF NQVR+KLSTF GFGGPTEVT GGNALKFYASVRL+++RIGLVKKGEE +GSQV V
Sbjct: 241  ILIFTNQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNMRRIGLVKKGEETLGSQVQV 300

Query: 834  KIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDA 655
            KIVKNK +PPF+T Q ELEFGKGICR+SEII+LG K+K+ITKA GA Y +NGQ+FRG+DA
Sbjct: 301  KIVKNKLAPPFRTVQIELEFGKGICRESEIIDLGLKNKFITKA-GAMYDLNGQNFRGKDA 359

Query: 654  IKRYFAENEGA 622
            +KR+ +EN  A
Sbjct: 360  LKRFLSENSTA 370


>ref|XP_007012807.1| RecA DNA recombination family protein [Theobroma cacao]
            gi|508783170|gb|EOY30426.1| RecA DNA recombination family
            protein [Theobroma cacao]
          Length = 420

 Score =  507 bits (1305), Expect = e-140
 Identities = 266/371 (71%), Positives = 302/371 (81%), Gaps = 1/371 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXEL 1552
            MARFL   + +K+SL + E    G+LG++  + +FS KGRR                 EL
Sbjct: 1    MARFLRNISSLKRSLIAPEVCRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKEL 60

Query: 1551 ALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGP 1372
            AL+QA+DQIT+SFGKGSIMWLGRS+ P++VPVVSTGSF+LDIALG GGLPKGRVVEIYGP
Sbjct: 61   ALKQALDQITSSFGKGSIMWLGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 120

Query: 1371 EASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALS 1192
            EASGKTTL LHVIAE+QK GGYCVFVDAEHALD ALAEAIGV T+NLLL+QPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALS 180

Query: 1191 LVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQT 1012
            LVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 1011 ILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLV 835
            ILIF+NQVRSKLSTF GFGGPTEVT GGNALKFYASVRL+I+R GLVKKGEE +GSQVLV
Sbjct: 241  ILIFVNQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLV 300

Query: 834  KIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDA 655
            KIVKNK +PPFKTAQFELEFG+GI R+ EII+L  KHK++TK+ GAFY  N +   G++A
Sbjct: 301  KIVKNKLAPPFKTAQFELEFGRGISREGEIIDLALKHKFVTKS-GAFYSFNDKKIHGKEA 359

Query: 654  IKRYFAENEGA 622
             K++ AENE A
Sbjct: 360  FKKFLAENESA 370


>ref|XP_010909693.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X2 [Elaeis guineensis]
          Length = 344

 Score =  506 bits (1304), Expect = e-140
 Identities = 263/331 (79%), Positives = 282/331 (85%), Gaps = 1/331 (0%)
 Frame = -3

Query: 1497 MWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGPEASGKTTLGLHVIAESQK 1318
            MWLGRS   R VPVVSTGSFSLD+ALGIGGLPKGRVVEIYGPEASGKTTL LHVIAE+QK
Sbjct: 1    MWLGRSHSRREVPVVSTGSFSLDLALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK 60

Query: 1317 HGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXX 1138
             GGYC FVDAEHALDP+LAE IGVKTDNLLL+QPDCGEQALSLVDTLIRSG         
Sbjct: 61   AGGYCAFVDAEHALDPSLAETIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 120

Query: 1137 XXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQTILIFINQVRSKLSTF-GF 961
              ALVPKSELDGEMGDAHMALQARLMSQALRKL HSLSLSQTILIFINQVRSKLSTF GF
Sbjct: 121  VAALVPKSELDGEMGDAHMALQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGF 180

Query: 960  GGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVKIVKNKHSPPFKTAQFEL 781
            GGPTEVTSGGNALKFYASVRL+IKRIGLVKKGEE VGSQVLVKIVKNKH+PPFKT QFEL
Sbjct: 181  GGPTEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTVQFEL 240

Query: 780  EFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAIKRYFAENEGAXXXXXXX 601
            EFGKGI RDSE+IELGCKHK+ITK GGAFY +NG SFRG+DAIKRYF ENEGA       
Sbjct: 241  EFGKGISRDSEVIELGCKHKFITKGGGAFYSLNGHSFRGKDAIKRYFVENEGAREELMMK 300

Query: 600  XXXXLVHHGTEKKDPDTETPETPDASESEEI 508
                ++H   +K++P++   + PD   +EEI
Sbjct: 301  LKEKILHGTEKKQEPES---QVPDGDPTEEI 328


>ref|XP_009785381.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial
            [Nicotiana sylvestris]
          Length = 423

 Score =  506 bits (1304), Expect = e-140
 Identities = 268/408 (65%), Positives = 309/408 (75%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1731 MARFLLRNAPIKQSLYSAE--CFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXX 1558
            MAR LLR A   ++  S +  C    + G    +  FS +G++                 
Sbjct: 1    MAR-LLRTATSLRTYLSPQPQCLRRSLFGALDQLCYFSSRGKKKSNSDGSDSGEENLSKK 59

Query: 1557 ELALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIY 1378
            +LAL+QA+DQITTSFGKGSIMWLGR++ P+ VPVVSTGSFSLD ALGIGGLPKGRV+EIY
Sbjct: 60   DLALKQALDQITTSFGKGSIMWLGRTVSPKQVPVVSTGSFSLDTALGIGGLPKGRVIEIY 119

Query: 1377 GPEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQA 1198
            GPEASGKTTL LHVIAE+Q+ GGYC FVDAEHAL+PALAE IGV T+NLLL+QPDCGEQA
Sbjct: 120  GPEASGKTTLALHVIAEAQRQGGYCCFVDAEHALNPALAETIGVNTENLLLSQPDCGEQA 179

Query: 1197 LSLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLS 1018
            LSLVDT+IRSG           ALVPK EL+GEMGDAHMA+QARLMSQALRKL HSLSLS
Sbjct: 180  LSLVDTIIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLS 239

Query: 1017 QTILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQV 841
            QTILIFINQVRSKLSTF GFGGPTEVT GGNALKFYASVRL+IKRIGLVKKGEE +GSQV
Sbjct: 240  QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQV 299

Query: 840  LVKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGR 661
            LVKIVKNKH+PPF+TA+FELEFGKGI R++E+I+LG KHK ITK GG +Y +N QS RGR
Sbjct: 300  LVKIVKNKHAPPFRTAEFELEFGKGISREAELIDLGVKHKLITKGGGGYYSINNQSLRGR 359

Query: 660  DAIKRYFAENEGAXXXXXXXXXXXLVHHGTEKKDPDTETPETPDASES 517
            DA+K + AEN+             L  HG ++K  D E+       E+
Sbjct: 360  DAVKHFLAENDSVREDLMMKLREKLWDHGDKEKGSDVESIHVDPVEEA 407


>ref|XP_008337714.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Malus
            domestica]
          Length = 420

 Score =  506 bits (1304), Expect = e-140
 Identities = 272/372 (73%), Positives = 304/372 (81%), Gaps = 2/372 (0%)
 Frame = -3

Query: 1731 MARFLLRNA-PIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXE 1555
            MAR LLRNA  +K+ L+  +    G+LGT+    NFS KGR+                 E
Sbjct: 1    MAR-LLRNAFSMKRFLFPPQVNQRGMLGTSTQFCNFSSKGRKKSKSDGSDSCDENLSKKE 59

Query: 1554 LALQQAIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYG 1375
            LAL+QA+DQIT+SFGKGSIMWLGRS+ PR VPVVSTGSFSLDIALGIGG PKGRVVEIYG
Sbjct: 60   LALKQALDQITSSFGKGSIMWLGRSVSPRQVPVVSTGSFSLDIALGIGGFPKGRVVEIYG 119

Query: 1374 PEASGKTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQAL 1195
            PEASGKTTL LHVIAESQK GG CVFVDAEHALDP LA++IGV T+NLLL+QPDCGEQAL
Sbjct: 120  PEASGKTTLALHVIAESQKQGGTCVFVDAEHALDPTLAQSIGVNTENLLLSQPDCGEQAL 179

Query: 1194 SLVDTLIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQ 1015
            SLVDTLIRSG           ALVPK ELDGEMGDAHMA+QARLMSQALRKL HSLSLSQ
Sbjct: 180  SLVDTLIRSGSVDVVVIDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 239

Query: 1014 TILIFINQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVL 838
            TILIF NQVR+KLSTF GFGGPTEVT GGNALKFYASVRL+++RIGLVKKGEE +GSQV 
Sbjct: 240  TILIFTNQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNMRRIGLVKKGEETLGSQVQ 299

Query: 837  VKIVKNKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRD 658
            VKIVKNK +PPF+T Q ELEFGKGICR+SEII+LG K+K+ITKA GA Y +NGQSFRG+D
Sbjct: 300  VKIVKNKLAPPFRTVQIELEFGKGICRESEIIDLGLKNKFITKA-GAMYDLNGQSFRGKD 358

Query: 657  AIKRYFAENEGA 622
            A+KR+ +EN  A
Sbjct: 359  ALKRFLSENSTA 370


>ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X2 [Solanum lycopersicum]
          Length = 418

 Score =  506 bits (1302), Expect = e-140
 Identities = 260/395 (65%), Positives = 304/395 (76%), Gaps = 1/395 (0%)
 Frame = -3

Query: 1719 LLRNAPIKQSLYSAECFTEGILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXELALQQ 1540
            L+    +  S Y   C ++ + G +  +  FS +G++                 +LAL+ 
Sbjct: 7    LINRRELASSAYK-NCLSKSLFGVSDQLCYFSSRGKKKSNSDGSDSGEENLSKKDLALKH 65

Query: 1539 AIDQITTSFGKGSIMWLGRSIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGPEASG 1360
            A+DQITTSFGKGSIMWLGR++ P+ VPVVSTGSFSLDIALGIGGLPKGRV+EIYGPEASG
Sbjct: 66   ALDQITTSFGKGSIMWLGRTVSPKQVPVVSTGSFSLDIALGIGGLPKGRVIEIYGPEASG 125

Query: 1359 KTTLGLHVIAESQKHGGYCVFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALSLVDT 1180
            KTTL LHVIAE+QK GGYC FVDAEHAL+P LAE IGV T NLLL+QPDCGEQALSLVDT
Sbjct: 126  KTTLALHVIAEAQKQGGYCCFVDAEHALNPTLAETIGVNTSNLLLSQPDCGEQALSLVDT 185

Query: 1179 LIRSGXXXXXXXXXXXALVPKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQTILIF 1000
            +IRSG           ALVPK EL+GEMGDAHMA+QARLMSQALRKL HSLSLSQTILIF
Sbjct: 186  IIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 245

Query: 999  INQVRSKLSTF-GFGGPTEVTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVKIVK 823
            INQVRSKLSTF GFGGP+EVT GGNALKFYASVRL+IKRIG VKKGEE +GSQVLVKIVK
Sbjct: 246  INQVRSKLSTFGGFGGPSEVTCGGNALKFYASVRLNIKRIGFVKKGEETIGSQVLVKIVK 305

Query: 822  NKHSPPFKTAQFELEFGKGICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAIKRY 643
            NKH+PPF+TA+FELEFGKGI R++E+I+LG KHK+ITK GG +Y++N Q+FRGRDA+K +
Sbjct: 306  NKHAPPFRTAEFELEFGKGISREAELIDLGVKHKFITKGGGGYYNINNQNFRGRDAVKLF 365

Query: 642  FAENEGAXXXXXXXXXXXLVHHGTEKKDPDTETPE 538
             +EN  A           L+  G  +K PD +  E
Sbjct: 366  LSENTSAREDLMMKLREKLIDQGDNEKGPDVDPVE 400


>gb|ERN06347.1| hypothetical protein AMTR_s00016p00242650 [Amborella trichopoda]
          Length = 417

 Score =  505 bits (1301), Expect = e-140
 Identities = 263/383 (68%), Positives = 305/383 (79%), Gaps = 1/383 (0%)
 Frame = -3

Query: 1662 GILGTAFHIRNFSVKGRRXXXXXXXXXXXXXXXXXELALQQAIDQITTSFGKGSIMWLGR 1483
            GI+G  F +RNF+ KG++                 E+AL+ A+DQIT+SFG  +IMWLGR
Sbjct: 6    GIVGGTFQLRNFAAKGKKKSKSDGSDSSEDKLSDKEVALKAALDQITSSFGNEAIMWLGR 65

Query: 1482 SIGPRNVPVVSTGSFSLDIALGIGGLPKGRVVEIYGPEASGKTTLGLHVIAESQKHGGYC 1303
              GPR VPVVSTGSFSLD+ALGIGGLPKGRVVEIYGPEASGKTTL LHVIAE+QK+G YC
Sbjct: 66   CTGPRYVPVVSTGSFSLDLALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKYGAYC 125

Query: 1302 VFVDAEHALDPALAEAIGVKTDNLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXALV 1123
            VFVDAEHALDPALAE+IGVKT+NLLL+QPDCGEQALSLVDTLIRSG           ALV
Sbjct: 126  VFVDAEHALDPALAESIGVKTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 185

Query: 1122 PKSELDGEMGDAHMALQARLMSQALRKLCHSLSLSQTILIFINQVRSKLSTF-GFGGPTE 946
            PKSEL+GEMGDAHMA+QARLMSQALRKL HSLS SQTILIFINQVR+KLSTF GFGGPTE
Sbjct: 186  PKSELEGEMGDAHMAVQARLMSQALRKLSHSLSRSQTILIFINQVRAKLSTFGGFGGPTE 245

Query: 945  VTSGGNALKFYASVRLHIKRIGLVKKGEEAVGSQVLVKIVKNKHSPPFKTAQFELEFGKG 766
            VTSGGNALKFYASVRL+IKRIG +KKGEE +GSQVLVK+VKNKH+PPFKTA+FELEFGKG
Sbjct: 246  VTSGGNALKFYASVRLNIKRIGFIKKGEEIIGSQVLVKVVKNKHAPPFKTAEFELEFGKG 305

Query: 765  ICRDSEIIELGCKHKYITKAGGAFYHMNGQSFRGRDAIKRYFAENEGAXXXXXXXXXXXL 586
            I RD+EI++LGCKH++ITKA G+F+ +NGQ+F G+DAIK Y  EN              L
Sbjct: 306  ISRDAEILDLGCKHRFITKA-GSFFRLNGQTFHGKDAIKTYLRENLDVSEDLCTKLKEKL 364

Query: 585  VHHGTEKKDPDTETPETPDASES 517
            + H  +++  +  + E    +ES
Sbjct: 365  LQHEHDEESEEPTSQEGVSPAES 387