BLASTX nr result
ID: Cinnamomum25_contig00008846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00008846
(858 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, ... 244 4e-62
ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, ... 244 7e-62
ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, ... 243 9e-62
ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, ... 241 3e-61
ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II a... 240 8e-61
gb|AIZ74344.1| polymerase subunit [Pinus massoniana] 228 4e-57
gb|ABK26380.1| unknown [Picea sitchensis] 225 3e-56
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 219 2e-54
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 216 1e-53
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 216 1e-53
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 213 2e-52
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi... 209 2e-51
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g... 209 2e-51
ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II a... 207 9e-51
ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II a... 206 1e-50
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases II a... 206 2e-50
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 205 3e-50
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 204 5e-50
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases II a... 204 5e-50
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 204 8e-50
>ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
[Amborella trichopoda] gi|769794061|ref|XP_011628851.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B [Amborella trichopoda]
Length = 144
Score = 244 bits (624), Expect = 4e-62
Identities = 126/145 (86%), Positives = 133/145 (91%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVELLFEDIFTL L+PDGKK DKVSRIEARSEQFDM++QLDVNTE YPLNVGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTKLNPDGKKFDKVSRIEARSEQFDMFMQLDVNTEVYPLNVGDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTLSLDGTPD+ YFTQGGR+SLADKFEY MHGKLYKIS E SG NVKVEIYASFGGLLM
Sbjct: 61 APTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYKIS-EDSGTNVKVEIYASFGGLLM 119
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+NA NFELDQRLFLLMRKV
Sbjct: 120 LLRGDPSNAVNFELDQRLFLLMRKV 144
>ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Musa acuminata subsp. malaccensis]
Length = 146
Score = 244 bits (622), Expect = 7e-62
Identities = 127/146 (86%), Positives = 131/146 (89%), Gaps = 2/146 (1%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVELLFEDIFTL LDPDGKK DKVSRIEARSEQFDMY+QLDVNTE YPLNVGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNVGDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGA-NVKVEIYASFGGLL 480
PTLSLDGTPDS YFTQ GR+SLADKFEY MHGKLYKIS E SG NVKVEIYASFGGLL
Sbjct: 61 TPTLSLDGTPDSGYFTQAGRKSLADKFEYVMHGKLYKISEEASGGPNVKVEIYASFGGLL 120
Query: 481 MVLTGYPANAANFELDQRLFLLMRKV 558
M+L G P+NAA FELDQRLFLLMRKV
Sbjct: 121 MMLKGDPSNAAQFELDQRLFLLMRKV 146
>ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Elaeis guineensis]
Length = 145
Score = 243 bits (621), Expect = 9e-62
Identities = 124/145 (85%), Positives = 131/145 (90%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVELLFEDIFTL +DPDGKK DKVSRIEARSEQFDMY+QLDVNTE YPL+VGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTLSLDGTPDS Y+ QG R+SLADKFEY MHGKLYKIS E SG NVKVEIYASFGGLLM
Sbjct: 61 APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+NA NFELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145
>ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Phoenix dactylifera]
Length = 145
Score = 241 bits (616), Expect = 3e-61
Identities = 123/145 (84%), Positives = 131/145 (90%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVELLFEDIFTL LDPDGKK DKV+RIEARSEQFDM +QLDVNTE YPL+VGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTRLDPDGKKFDKVTRIEARSEQFDMSMQLDVNTEVYPLHVGDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTLSLDGTPDS Y+TQG R+SLADKFEY MHGKLYKIS E SG NVKVE+YASFGGLLM
Sbjct: 61 APTLSLDGTPDSGYYTQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVELYASFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+NA NFELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145
>ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nelumbo nucifera] gi|720039239|ref|XP_010268241.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Nelumbo nucifera]
Length = 145
Score = 240 bits (613), Expect = 8e-61
Identities = 122/145 (84%), Positives = 132/145 (91%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MV+LLFEDIFT++ +DPDGKK DKVSRI A SEQFDMY+QLDVNTE YPL V DKFTMVL
Sbjct: 1 MVDLLFEDIFTVKQIDPDGKKFDKVSRIVATSEQFDMYMQLDVNTEIYPLRVDDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTLSLDGTPDS Y+TQ GR+SLADKFEY MHGKLYKIS EGSGANVKVEIYAS+GGLLM
Sbjct: 61 APTLSLDGTPDSGYYTQVGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASYGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+NAANFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAANFELDQRLFLLMRKV 145
>gb|AIZ74344.1| polymerase subunit [Pinus massoniana]
Length = 145
Score = 228 bits (581), Expect = 4e-57
Identities = 114/145 (78%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVELLFEDIFT+ +DPDGKK DKVSRIEARSEQFDMY+ LDVN + YP++VG+KF + L
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTL+LDGTPD+ YF QGGR+SLADK+EY M+GKLYKIS EGSGANVKVEI ASFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYKISEEGSGANVKVEINASFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+NA NFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 225 bits (574), Expect = 3e-56
Identities = 112/145 (77%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVELLFEDIFT+ +DPDGKK DKVSRIEARSEQFDMY+ LDVN + YP++VG+KF + L
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTL+LDGTPD+ YF QGGR+SLADK+EY M+GKLY +S EGSGANVKVEI ASFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+NA NFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 219 bits (558), Expect = 2e-54
Identities = 111/146 (76%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVE LFEDIFT+ LDPDGKK D+VSRIEARSEQFDMY+QLDV TE YP+ GDKFTMVL
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 307 APTLSLDGTPD-SYFTQGGRESLADKFEYAMHGKLYKISVEGSGAN-VKVEIYASFGGLL 480
APTL+LDGTPD ++TQ GR++LADK++Y MHGKLYKIS +GSG KVEIYASFGGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 481 MVLTGYPANAANFELDQRLFLLMRKV 558
M+L G P+ AANFELDQRLFLL+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 216 bits (551), Expect = 1e-53
Identities = 110/150 (73%), Positives = 129/150 (86%), Gaps = 2/150 (1%)
Frame = +1
Query: 115 PLCRMVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKF 294
P +MVE LFEDIFT+ LDPDGKK D+VSRIEARSEQFDMY+QLDV TE YP+ GD+F
Sbjct: 247 PPRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRF 306
Query: 295 TMVLAPTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVE-GSGANVKVEIYASF 468
TMVLAPTL+LDGTPD+ ++TQ GR++LADKF+Y MHGKLYKIS + SG KVEIYASF
Sbjct: 307 TMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASF 366
Query: 469 GGLLMVLTGYPANAANFELDQRLFLLMRKV 558
GGLLM+L G P++AA+FELDQRLFLL+RKV
Sbjct: 367 GGLLMMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 216 bits (551), Expect = 1e-53
Identities = 110/150 (73%), Positives = 129/150 (86%), Gaps = 2/150 (1%)
Frame = +1
Query: 115 PLCRMVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKF 294
P +MVE LFEDIFT+ LDPDGKK D+VSRIEARSEQFDMY+QLDV TE YP+ GD+F
Sbjct: 42 PPRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRF 101
Query: 295 TMVLAPTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVE-GSGANVKVEIYASF 468
TMVLAPTL+LDGTPD+ ++TQ GR++LADKF+Y MHGKLYKIS + SG KVEIYASF
Sbjct: 102 TMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASF 161
Query: 469 GGLLMVLTGYPANAANFELDQRLFLLMRKV 558
GGLLM+L G P++AA+FELDQRLFLL+RKV
Sbjct: 162 GGLLMMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 213 bits (541), Expect = 2e-52
Identities = 107/147 (72%), Positives = 126/147 (85%), Gaps = 3/147 (2%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
M E LFEDIFT+ LDPDGKK D+VSRIEAR+EQ ++Y+QLDV T+ YP++ GDKFTMVL
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKIS--VEGSGANVKVEIYASFGGL 477
PTL+LDGTPD+ +FTQ GR++LADK+EY MHGKLYKIS E SG N KVE+YASFGGL
Sbjct: 61 VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120
Query: 478 LMVLTGYPANAANFELDQRLFLLMRKV 558
LM+L G P++AANFELDQRLFLLMRKV
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147
>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
Length = 215
Score = 209 bits (531), Expect = 2e-51
Identities = 105/148 (70%), Positives = 126/148 (85%), Gaps = 4/148 (2%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
M E LFEDIFT+ LDPDGKK D+VSRIEARS+QFDMY+QLDV T+ YP++ GD+FTMVL
Sbjct: 68 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGAN---VKVEIYASFGG 474
PTL+LDGTPDS +FTQ GR++LADK+EY MHGKLYKIS + ++ KVE+YASFGG
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187
Query: 475 LLMVLTGYPANAANFELDQRLFLLMRKV 558
LL++L G P++AANFELDQRLFLLMRKV
Sbjct: 188 LLVMLKGDPSSAANFELDQRLFLLMRKV 215
>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
gi|29244685|gb|AAO73277.1| putative RNA polymerase
[Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
putative RNA polymerase [Oryza sativa Japonica Group]
gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
protein OsJ_13351 [Oryza sativa Japonica Group]
gi|215692970|dbj|BAG88390.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 148
Score = 209 bits (531), Expect = 2e-51
Identities = 105/148 (70%), Positives = 126/148 (85%), Gaps = 4/148 (2%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
M E LFEDIFT+ LDPDGKK D+VSRIEARS+QFDMY+QLDV T+ YP++ GD+FTMVL
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGAN---VKVEIYASFGG 474
PTL+LDGTPDS +FTQ GR++LADK+EY MHGKLYKIS + ++ KVE+YASFGG
Sbjct: 61 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120
Query: 475 LLMVLTGYPANAANFELDQRLFLLMRKV 558
LL++L G P++AANFELDQRLFLLMRKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148
>ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana tomentosiformis]
gi|697124414|ref|XP_009616201.1| PREDICTED: DNA-directed
RNA polymerases II and V subunit 8A-like [Nicotiana
tomentosiformis] gi|697124416|ref|XP_009616202.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Nicotiana tomentosiformis]
Length = 145
Score = 207 bits (526), Expect = 9e-51
Identities = 104/145 (71%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVE LFEDIFT+ DPDGKK D+V+RIEARSEQFDMY+ LDVNTE YP+ V +KF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
A TL+LDGTPD+ YF QG ++SLADKFEY MHGKLY+IS EGSG +VK +I+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
L G P+ AA FELDQ+LFLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKLFLLLRKV 145
>ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana sylvestris]
Length = 145
Score = 206 bits (525), Expect = 1e-50
Identities = 104/145 (71%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVE LFEDIFT+ DPDGKK D+V+RIEARSEQFDMY+ LDVNTE YP+ V +KF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
A TL+LDGTPD+ YF QG ++SLADKFEY MHGKLY+IS EGSG +VK +I+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYIMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
L G P+ AA FELDQ+LFLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKLFLLLRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Solanum lycopersicum] gi|460377396|ref|XP_004234479.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Solanum lycopersicum]
Length = 145
Score = 206 bits (523), Expect = 2e-50
Identities = 103/145 (71%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVE LFEDIFT+ DPDGKK D+V+RIEARSEQFDM++ LDVNTE YP+ V DKF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
A TL+LDGTPD+ YF QG ++SLADKFEY MHGKLY+IS EGSG +VK +I+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
L G P+ AA FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 205 bits (522), Expect = 3e-50
Identities = 102/145 (70%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
MVE LFEDIFT+ DPDGKK D+V+RIEARSEQFDM++ LD+NTE YP+ V DKF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
A TL+LDGTPD+ YF QG ++SLADKFEY MHGKLY+IS EGSG +VK +I+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
L G P+ AA FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 204 bits (520), Expect = 5e-50
Identities = 103/145 (71%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
M E LFED F + LDPDGKK DKVSR+EARSEQ MY+QLDV T+ YPL G+KF MVL
Sbjct: 1 MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
APTL+LDGTPD+ Y+TQ GR++LAD +EY M GKLYKIS + S N KVEIYASFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L G P+ AA+FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A [Vitis
vinifera] gi|731391203|ref|XP_010650676.1| PREDICTED:
DNA-directed RNA polymerases II and V subunit 8A [Vitis
vinifera] gi|296084252|emb|CBI24640.3| unnamed protein
product [Vitis vinifera]
Length = 145
Score = 204 bits (520), Expect = 5e-50
Identities = 103/145 (71%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
M LF DIF + +DPDGKK DKVSRIEA+SEQ DMY+QLDVNTE YP++ G+KF M L
Sbjct: 1 MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGANVKVEIYASFGGLLM 483
A TL LDGTPD+ Y+TQ GR+SLADKFEY MHGKLYKIS EGSG NVK IY SFGGLLM
Sbjct: 61 ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120
Query: 484 VLTGYPANAANFELDQRLFLLMRKV 558
+L+G PAN A +LDQR+FLL+RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 204 bits (518), Expect = 8e-50
Identities = 102/162 (62%), Positives = 131/162 (80%), Gaps = 4/162 (2%)
Frame = +1
Query: 127 MVELLFEDIFTLEALDPDGKKLDKVSRIEARSEQFDMYLQLDVNTEAYPLNVGDKFTMVL 306
M E LFEDIF + +DPDGKK D+V+RIEARSEQ +MY+QLD+ T+ YP+++GDKFTMVL
Sbjct: 1 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60
Query: 307 APTLSLDGTPDS-YFTQGGRESLADKFEYAMHGKLYKISVEGSGAN---VKVEIYASFGG 474
APTL+LDGTPD+ Y+TQ GR++LADK++Y MHGKLYKIS + S + KVEIYASFGG
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120
Query: 475 LLMVLTGYPANAANFELDQRLFLLMRKV*SLYSVCQAERISL 600
LLM+L G P++AAN ELDQ+LFLL+RK VC+ E++ +
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRK------VCKDEKVGM 156