BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00008667
         (2537 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloropl...  1041   0.0  
ref|XP_008807186.1| PREDICTED: twinkle homolog protein, chloropl...  1018   0.0  
ref|XP_008808520.1| PREDICTED: twinkle homolog protein, chloropl...  1014   0.0  
ref|XP_006853301.1| PREDICTED: twinkle homolog protein, chloropl...   970   0.0  
ref|XP_009779935.1| PREDICTED: twinkle homolog protein, chloropl...   957   0.0  
ref|XP_011096707.1| PREDICTED: twinkle homolog protein, chloropl...   956   0.0  
ref|XP_012827508.1| PREDICTED: twinkle homolog protein, chloropl...   949   0.0  
ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloropl...   948   0.0  
ref|XP_007023031.1| Toprim domain-containing protein isoform 1 [...   939   0.0  
ref|XP_009353864.1| PREDICTED: twinkle homolog protein, chloropl...   937   0.0  
emb|CDP12599.1| unnamed protein product [Coffea canephora]            936   0.0  
ref|XP_008383370.1| PREDICTED: twinkle homolog protein, chloropl...   936   0.0  
ref|XP_002268852.1| PREDICTED: twinkle homolog protein, chloropl...   936   0.0  
ref|XP_004231556.1| PREDICTED: twinkle homolog protein, chloropl...   932   0.0  
ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloropl...   932   0.0  
ref|XP_009353863.1| PREDICTED: twinkle homolog protein, chloropl...   931   0.0  
ref|XP_010315626.1| PREDICTED: twinkle homolog protein, chloropl...   929   0.0  
ref|XP_011039292.1| PREDICTED: twinkle homolog protein, chloropl...   927   0.0  
ref|XP_007023033.1| Toprim domain-containing protein isoform 3 [...   927   0.0  
ref|XP_006468363.1| PREDICTED: twinkle homolog protein, chloropl...   927   0.0  

>ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Nelumbo nucifera]
          Length = 769

 Score = 1041 bits (2691), Expect = 0.0
 Identities = 499/702 (71%), Positives = 571/702 (81%), Gaps = 17/702 (2%)
 Frame = -2

Query: 2302 YRLLSHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHG 2123
            + LLS N+LMGSK++L+ +P TI +S     HFHT+  LFST+P KP S   H+ +KK G
Sbjct: 67   HTLLSSNILMGSKNLLRSAPFTIPISFSRLHHFHTYRLLFSTSPPKPISIFHHLIVKKSG 126

Query: 2122 FCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGG 1943
            FC  +     R VH+   E E  D  +L  LK +LE  GI C SC+PGQY+ ++CP+C G
Sbjct: 127  FCYMSYARVPRPVHMDYPEEETIDSIRLNALKKRLEMIGIDCTSCRPGQYNHLICPKCEG 186

Query: 1942 GESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYSSLEKSSKGKPYRVITE 1763
            G+S ERS S+ I +DG  AMW+CFRAKCGWRG  +A  +G+ +       K  P R I+E
Sbjct: 187  GDSMERSLSLLITQDGGSAMWTCFRAKCGWRGGAQAFPDGRAFGGANLIPKVMPKREISE 246

Query: 1762 ESLELQPLCDELIAYFAERMISGETLRRNAVMQRS-----------------YLGDQIVI 1634
            ESL L+PLCDEL+AYFAERMISGETLRRNAVMQ+S                 +   +I I
Sbjct: 247  ESLGLEPLCDELLAYFAERMISGETLRRNAVMQKSGKQVCGAIDGKKLSLSSHGNTKIAI 306

Query: 1633 AFTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAG 1454
            AFTYR+NG+L+SCKYRG++K FWQEKDTEKILYG+DDIKQ SDIIIVEGE+DKLSMEEAG
Sbjct: 307  AFTYRQNGKLVSCKYRGVDKVFWQEKDTEKILYGLDDIKQTSDIIIVEGEIDKLSMEEAG 366

Query: 1453 YFNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXX 1274
            + NCVSVPDGAP++VS KELP+  +DTKYQYLWNCKEY++KASRIILATDAD PGQ    
Sbjct: 367  FRNCVSVPDGAPAKVSTKELPSIEKDTKYQYLWNCKEYLDKASRIILATDADPPGQALAE 426

Query: 1273 XXXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSD 1094
                     RCWRV+WPKK+  +VCKDANEVL + GP+AL+EVIENAELYPI+GLF F D
Sbjct: 427  ELARRLGRERCWRVRWPKKDGGNVCKDANEVLSYYGPDALKEVIENAELYPIRGLFNFKD 486

Query: 1093 YFDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNIN 914
            YFDE+D+YYH S G+E GVSTGW ALN LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N
Sbjct: 487  YFDEIDSYYHCSFGYELGVSTGWRALNNLYNVVPGELTIVTGVPNSGKSEWIDALLCNLN 546

Query: 913  RSVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTF 734
             S GWKF LCSMENKVREHARKLLEKH++KPFF+ARYGES+ERMSVEE E GK+WLNDTF
Sbjct: 547  ESDGWKFALCSMENKVREHARKLLEKHLKKPFFSARYGESMERMSVEELELGKEWLNDTF 606

Query: 733  HLIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK 554
            +LIRCEDDCLPS+KWVLELAKA VLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK
Sbjct: 607  YLIRCEDDCLPSVKWVLELAKAVVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK 666

Query: 553  IKRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGP 374
            IKRFAQHHACHVWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD  AGP
Sbjct: 667  IKRFAQHHACHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPQAGP 726

Query: 373  LDRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASR 248
            LD+VQIC+RK+RNKVIGNIGDAFLSYNRTTGEF DID+  S+
Sbjct: 727  LDQVQICVRKIRNKVIGNIGDAFLSYNRTTGEFKDIDETPSK 768


>ref|XP_008807186.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            [Phoenix dactylifera]
          Length = 698

 Score = 1018 bits (2633), Expect = 0.0
 Identities = 499/699 (71%), Positives = 571/699 (81%), Gaps = 8/699 (1%)
 Frame = -2

Query: 2317 MPSLSYR----LLSHNVLMG-SKHM-LKCSPGT-IHLSSIHSRHFHTHLHLFSTNPEKPT 2159
            MP L  R    LL  + LMG SKH+ ++CS    +  S     H HTH  L   +P  P 
Sbjct: 2    MPPLPRRSLHTLLPSSFLMGGSKHIPMRCSAAAAVPGSPYRLLHLHTHRRLVLQSPRSPN 61

Query: 2158 SKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPG 1979
            SK     LK   F S  P+M ++TVHL   + +  D ++LA LK KL + GI CGSC+PG
Sbjct: 62   SKYLPSCLKSARFFSVGPLMVNKTVHLPKPDDKMVDTERLARLKSKLAEVGIRCGSCQPG 121

Query: 1978 QYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYS-SLE 1802
            +YSRM CPQC GG S+E+SFS+FIRED +LAMWSCFRAKCGWRG  + S   K ++   +
Sbjct: 122  KYSRMTCPQCKGGSSEEKSFSLFIREDLQLAMWSCFRAKCGWRGTAKVSEEVKAHNLRSD 181

Query: 1801 KSSKGKPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTY 1622
            +  + K +R I+E  L+L+PLC+EL+AYF+ERMIS ETLRRNAVMQR Y  DQIVIAFTY
Sbjct: 182  EPLQVKGHRKISERELQLEPLCEELVAYFSERMISAETLRRNAVMQRKY-NDQIVIAFTY 240

Query: 1621 RRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNC 1442
            RRNG L+ CKYR ++KKFWQE+DTEKI YG+DDIKQA+DIIIVEGE+DKLSMEEAGY NC
Sbjct: 241  RRNGTLVGCKYREVSKKFWQERDTEKIFYGLDDIKQANDIIIVEGEVDKLSMEEAGYRNC 300

Query: 1441 VSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXX 1262
            VSVPDGAP++VS+ E+P E ED K+QYLW CKEY++KASRIILATD D PGQ        
Sbjct: 301  VSVPDGAPAKVSE-EIPNEKEDKKFQYLWTCKEYLDKASRIILATDVDPPGQALAEEIAR 359

Query: 1261 XXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDE 1082
                 RCWRVKWPKKN TDVCKDANEVLM+LGP+ALR+V+ENAELYPI+GLF FSD+F E
Sbjct: 360  RIGKERCWRVKWPKKNSTDVCKDANEVLMYLGPDALRKVVENAELYPIRGLFTFSDFFHE 419

Query: 1081 VDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVG 902
            +DAYYH   GFE GVSTGW AL+ELYNVVPGELT++TGVPNSGKSEWIDALLCNIN S G
Sbjct: 420  IDAYYHCHHGFELGVSTGWKALDELYNVVPGELTVITGVPNSGKSEWIDALLCNINESHG 479

Query: 901  WKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIR 722
            WKFVLCSMENKVR+HARKLLEKHI+KPFFNARYG S+ERMSVEE EQGK+WLND FHLIR
Sbjct: 480  WKFVLCSMENKVRDHARKLLEKHIKKPFFNARYGGSLERMSVEELEQGKEWLNDAFHLIR 539

Query: 721  CEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRF 542
            CEDDCLPSIKWVL LAKAAVLR+GVRGLVIDPYNELDHQRP NQTETEYVSQMLT+IKRF
Sbjct: 540  CEDDCLPSIKWVLTLAKAAVLRYGVRGLVIDPYNELDHQRPANQTETEYVSQMLTRIKRF 599

Query: 541  AQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRV 362
            AQHH+CHVWFVAHPRQLQHW G PPN+YDISGSAHFINKCDNGIV+HRNRD+ AGPLDRV
Sbjct: 600  AQHHSCHVWFVAHPRQLQHWDGCPPNIYDISGSAHFINKCDNGIVIHRNRDKKAGPLDRV 659

Query: 361  QICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASRK 245
            Q+C+RKVRNKVIGNIG+AFLSYNR TGEF+DIDD   +K
Sbjct: 660  QVCVRKVRNKVIGNIGEAFLSYNRITGEFLDIDDKDQKK 698


>ref|XP_008808520.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            isoform X1 [Phoenix dactylifera]
          Length = 699

 Score = 1014 bits (2621), Expect = 0.0
 Identities = 493/694 (71%), Positives = 569/694 (81%), Gaps = 3/694 (0%)
 Frame = -2

Query: 2332 PESKRMPSLSYRLLSHNVLMGSKHM-LKCSPGT-IHLSSIHSRHFHTHLHLFSTNPEKPT 2159
            P+  R P L   L S +++ GSKH+ ++CS    + +S     H HT   L   +  +P 
Sbjct: 2    PQLPRCP-LDNLLHSSSLMGGSKHLTVRCSTSAAVPVSPYRLLHLHTRRGLLFQSARRPI 60

Query: 2158 SKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPG 1979
            SK    SLK   F S  PV  S+ VHL   +    D ++LA LK+KLE+ GI CGSC+PG
Sbjct: 61   SKYQPSSLKSARFFSVGPVTQSKAVHLPELDDRMIDTERLARLKLKLEEQGIKCGSCQPG 120

Query: 1978 QYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYS-SLE 1802
            QY+ M CPQC GG S+++SFS+FIRED ELA+WSCFRAKCGWRG  +AS   K  +  ++
Sbjct: 121  QYTHMTCPQCKGGPSEDKSFSLFIREDLELAVWSCFRAKCGWRGVAKASGEAKASNLGVD 180

Query: 1801 KSSKGKPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTY 1622
            +  + K YR I+E  L+L+PLC+EL+AYF+ERMIS ETLRRNAVMQR Y  +QIVIAF+Y
Sbjct: 181  QPLQVKEYRKISERDLQLEPLCEELVAYFSERMISAETLRRNAVMQRIY-NNQIVIAFSY 239

Query: 1621 RRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNC 1442
            RRNG L+ CKYR ++K+FWQE+DTEK  YG+DDIKQ +DIIIVEGEMDKLSMEEAGY NC
Sbjct: 240  RRNGTLVGCKYRAVSKQFWQERDTEKFFYGLDDIKQGNDIIIVEGEMDKLSMEEAGYRNC 299

Query: 1441 VSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXX 1262
            VSVPDGAP++VS  ++P E ED K+QYLW CKEY+EKASRIILATDAD PGQ        
Sbjct: 300  VSVPDGAPAKVSD-DMPVEKEDKKFQYLWTCKEYLEKASRIILATDADPPGQALAEEIAR 358

Query: 1261 XXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDE 1082
                 RCWRVKWPKKN TDVCKDANEVLM+LGP+ALR+VIENAELYPI+GL  FSD+F E
Sbjct: 359  RVGKERCWRVKWPKKNSTDVCKDANEVLMYLGPDALRKVIENAELYPIRGLLSFSDFFHE 418

Query: 1081 VDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVG 902
            +DAYYH + GFE GVSTGW AL+ELYNVVPGELT++TGVPNSGKSEWIDALLCNI+ S G
Sbjct: 419  IDAYYHCNYGFELGVSTGWKALDELYNVVPGELTVITGVPNSGKSEWIDALLCNISESHG 478

Query: 901  WKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIR 722
            WKFVLCSMENKVREHARKLLEKH++KPFFNARYG SVERMSVEE EQGKKWL+DTFHLIR
Sbjct: 479  WKFVLCSMENKVREHARKLLEKHVKKPFFNARYGGSVERMSVEELEQGKKWLDDTFHLIR 538

Query: 721  CEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRF 542
            CED CLPSIKWVL LAKAAVLR+GVRGLVIDPYNELDHQRP NQTETEYVSQMLT+IKRF
Sbjct: 539  CEDACLPSIKWVLTLAKAAVLRYGVRGLVIDPYNELDHQRPANQTETEYVSQMLTRIKRF 598

Query: 541  AQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRV 362
            AQHH+CHVWFVAHPRQLQHW GGPPN+YDISGSAHFINKCDNGIV+HRNRD+NAGPLD V
Sbjct: 599  AQHHSCHVWFVAHPRQLQHWGGGPPNMYDISGSAHFINKCDNGIVIHRNRDKNAGPLDLV 658

Query: 361  QICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDD 260
            Q+C+RKVRNKVIG+IG+AFLSYNR TGEF+DIDD
Sbjct: 659  QVCVRKVRNKVIGHIGEAFLSYNRVTGEFMDIDD 692


>ref|XP_006853301.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Amborella trichopoda] gi|548856954|gb|ERN14768.1|
            hypothetical protein AMTR_s00032p00034370 [Amborella
            trichopoda]
          Length = 689

 Score =  970 bits (2507), Expect = 0.0
 Identities = 475/687 (69%), Positives = 551/687 (80%), Gaps = 17/687 (2%)
 Frame = -2

Query: 2275 MGSKHML---KCSPGTIHL---SSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCS 2114
            MGSKH L   + SPG+  L     I   H  +   L   NP KP S +  +SLK+    S
Sbjct: 1    MGSKHFLSNPQVSPGSSRLLFFCLIRPLHTGSSAGLLFGNPTKPISTLRLVSLKRPRLAS 60

Query: 2113 FAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGES 1934
              PVM  R VH++  E +    ++L++L+ KL+  GI C SC PGQYS MLCP+C GG +
Sbjct: 61   LRPVMIKRAVHVERQEVDNVVPERLSLLREKLKNEGIICDSCTPGQYSNMLCPKCEGGST 120

Query: 1933 KERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYSSLEKS----------SKGK 1784
            +ERSFS+FIREDG +A+W+CFR KCGWRGH++AS N   Y+  E++          SK K
Sbjct: 121  RERSFSLFIREDGSMALWTCFRGKCGWRGHIQASSNAS-YAPAERNEKKQINGDLNSKKK 179

Query: 1783 PYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQL 1604
            P RV+TE+SL L+PLC E++AYF+ERMIS ETLRRN VMQR  + DQ VIAF YRR+G++
Sbjct: 180  PSRVLTEKSLGLEPLCPEILAYFSERMISPETLRRNGVMQRK-MSDQNVIAFPYRRDGRI 238

Query: 1603 ISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDG 1424
            ++CKYR I K F+QE+DTE++LYG+DDIK ASDIIIVEGEMDKLSMEE GY NCVSVPDG
Sbjct: 239  VNCKYRDIEKNFFQERDTERVLYGLDDIKNASDIIIVEGEMDKLSMEEVGYLNCVSVPDG 298

Query: 1423 APSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXR 1244
            AP++VS+KELP   +DTKYQ+LW  KEY +KASRIILATDAD PGQ             R
Sbjct: 299  APAKVSEKELPPIEKDTKYQFLWKYKEYFQKASRIILATDADVPGQSLAEELARRVGRER 358

Query: 1243 CWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYH 1064
            CWRV WPKKN+ +VCKDANEVLM LGP+ALR+VIENAELYPI+GLFRF DYFDE+DAYYH
Sbjct: 359  CWRVSWPKKNEIEVCKDANEVLMHLGPQALRDVIENAELYPIRGLFRFDDYFDEIDAYYH 418

Query: 1063 RSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLC 884
            R LG E GVSTGW +L++LYNVVPGELTIVTGVPNSGKSEWIDAL+CNIN   GW F LC
Sbjct: 419  RILGNELGVSTGWRSLDDLYNVVPGELTIVTGVPNSGKSEWIDALICNINAREGWTFALC 478

Query: 883  SMENKVREHARKLLEKHIRKPFF-NARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDC 707
            SMENKVREHARKLLEKHI+KPFF N+RYG+S+ RMS +E  +GK+WL+DTFHLIR EDD 
Sbjct: 479  SMENKVREHARKLLEKHIKKPFFENSRYGDSIPRMSRDELREGKQWLSDTFHLIRYEDDS 538

Query: 706  LPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHA 527
            LPSIKWV++LAKAAVLR+GVRGLVIDPYNELDHQRPPNQTETEYVSQMLT +KRFAQHH 
Sbjct: 539  LPSIKWVIDLAKAAVLRYGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTLVKRFAQHHQ 598

Query: 526  CHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIR 347
            CHVWFVAHPRQLQ+W GG PNLYDISGSAHFINKCDNGIVVHRNRD +AGPLDRVQIC+R
Sbjct: 599  CHVWFVAHPRQLQNWNGGAPNLYDISGSAHFINKCDNGIVVHRNRDPDAGPLDRVQICVR 658

Query: 346  KVRNKVIGNIGDAFLSYNRTTGEFVDI 266
            KVRNKV GNIGDAFLSY RTTGEF D+
Sbjct: 659  KVRNKVSGNIGDAFLSYRRTTGEFKDV 685


>ref|XP_009779935.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Nicotiana sylvestris]
          Length = 699

 Score =  957 bits (2475), Expect = 0.0
 Identities = 481/701 (68%), Positives = 550/701 (78%), Gaps = 14/701 (1%)
 Frame = -2

Query: 2308 LSYRLL----SHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLH-----LFSTNPEKPTS 2156
            L YR L    S+N  MGSK+ L     TIH + I      THL      +FST   KP S
Sbjct: 4    LPYRRLVLNNSNNFAMGSKYFLHKPSITIHKTIIPVLSSKTHLFQNQRLIFSTFASKPIS 63

Query: 2155 KI---PHISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCK 1985
             I    ++S + H      P   S  V   P EG   + + +  LK KL + GI  GSC 
Sbjct: 64   PIRGTSNLSYRPHRI----PPPVSGVVLEDPVEGI-AESEHVKALKEKLSQVGIDIGSCG 118

Query: 1984 PGQYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGK-GYSS 1808
            PGQYS +LCP C GG+S E+S S+FI +DG  A W+CFRAKCGWRG  RA  + K  ++ 
Sbjct: 119  PGQYSGLLCPMCTGGDSNEKSLSLFITQDGHAATWTCFRAKCGWRGGTRAFADVKTAFAD 178

Query: 1807 LEKSSK-GKPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIA 1631
            +++  K  K YR ITEESL L+PLCD L++YF+ERMIS ETLRRNAVMQR Y GDQIVIA
Sbjct: 179  MKRIGKVTKKYRQITEESLGLEPLCDVLLSYFSERMISRETLRRNAVMQRRY-GDQIVIA 237

Query: 1630 FTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGY 1451
            FTYRR+G L+SCKYR I KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+
Sbjct: 238  FTYRRDGALVSCKYRDITKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGF 297

Query: 1450 FNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXX 1271
             NCVSVPDGAP  VS KELP   +DTKYQYLWNCKEY+EKASRIILATD D PGQ     
Sbjct: 298  RNCVSVPDGAPPVVSDKELPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQALAEE 357

Query: 1270 XXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDY 1091
                    RCWRV WPKK+  D  KDANEVLM+LGP ALREVIE AELYPI+GLF F DY
Sbjct: 358  LARRLGRERCWRVTWPKKSTKDRFKDANEVLMYLGPGALREVIEGAELYPIQGLFNFKDY 417

Query: 1090 FDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINR 911
            F E+DAYYH+++G+E GVSTGW +LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N+
Sbjct: 418  FTEIDAYYHQTIGYELGVSTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNQ 477

Query: 910  SVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFH 731
            SVGWKF LCSMENKVR+HARKLLEKHI+KPFF+ RYGESV+RMS +EFE+GK+WL+DTF 
Sbjct: 478  SVGWKFALCSMENKVRDHARKLLEKHIKKPFFDVRYGESVQRMSAQEFEEGKQWLSDTFF 537

Query: 730  LIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKI 551
            LIRCE+DCLP+I WVL LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKI
Sbjct: 538  LIRCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKI 597

Query: 550  KRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPL 371
            KRFAQHH+CHVWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+
Sbjct: 598  KRFAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPV 657

Query: 370  DRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASR 248
            D+VQ+C+RKVRNKV G IGDAFLSY+R TGEF+D+D+  S+
Sbjct: 658  DQVQVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDLDEHPSK 698


>ref|XP_011096707.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 628

 Score =  956 bits (2470), Expect = 0.0
 Identities = 456/613 (74%), Positives = 520/613 (84%), Gaps = 2/613 (0%)
 Frame = -2

Query: 2086 VHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESKERSFSIFI 1907
            V ++  E +  D   L +L+ KL++ G    +C PGQY+ +LCP C GG+S+E+S S+ I
Sbjct: 10   VDVETLEKQLVDEKLLIMLRKKLQEIGFDGNACMPGQYNGLLCPSCKGGDSEEKSLSLHI 69

Query: 1906 REDGELAMWSCFRAKCGWRGHMRASVNGKG-YSSLEKSSKGKPY-RVITEESLELQPLCD 1733
             EDG  A+W+CFRAKCGW+G  RA  + +  + ++ K ++ K   R+ITEESL L+PLC+
Sbjct: 70   TEDGSAAVWTCFRAKCGWKGTTRAYADVRSTFETMSKITRIKQATRIITEESLGLEPLCN 129

Query: 1732 ELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKKFWQEKD 1553
            EL+AYFAERMISGETLRRNAV+Q+   G+QIVIAFTYRRNG+L+SCKYR I KKFWQE D
Sbjct: 130  ELLAYFAERMISGETLRRNAVLQKR-TGNQIVIAFTYRRNGELVSCKYRDITKKFWQEAD 188

Query: 1552 TEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELPAEGEDT 1373
            TEKI YG+DDIK+ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP +VS K LP+E EDT
Sbjct: 189  TEKIFYGLDDIKEASDIIIVEGEMDKLAMEEAGFKNCVSVPDGAPPKVSNKALPSEEEDT 248

Query: 1372 KYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKNDTDVCKD 1193
            KY+YLWNCK+Y  KASRIILATD D PGQ             RCWRVKWPKKND++  KD
Sbjct: 249  KYKYLWNCKDYTAKASRIILATDGDPPGQALAEELARRLGRERCWRVKWPKKNDSESFKD 308

Query: 1192 ANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVSTGWMALN 1013
            ANEVLM++GP+ALREVIENAELYPI+GLF F DYFDE+D YYH+SLGFE GVSTGW ALN
Sbjct: 309  ANEVLMYMGPDALREVIENAELYPIRGLFNFKDYFDEIDDYYHQSLGFELGVSTGWRALN 368

Query: 1012 ELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHARKLLEKH 833
            ELYNVVPGELTIVTGVPNSGKSEWIDALLCNIN SVGWKF LCSMENKVREHARKLLEKH
Sbjct: 369  ELYNVVPGELTIVTGVPNSGKSEWIDALLCNINHSVGWKFALCSMENKVREHARKLLEKH 428

Query: 832  IRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAKAAVLRH 653
            IRKPFF+ RYGESVERMSVEE EQGKKWL+D+F LIRCE+DCLPSI WVL+LA+ AVLRH
Sbjct: 429  IRKPFFDVRYGESVERMSVEELEQGKKWLSDSFSLIRCENDCLPSINWVLDLARIAVLRH 488

Query: 652  GVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQLQHWVGG 473
            GV GLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH CHVWFVAHPRQL +W+GG
Sbjct: 489  GVNGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHGCHVWFVAHPRQLHNWIGG 548

Query: 472  PPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGDAFLSYN 293
            PPN+YDISGSAHFINKCDNGIV+HRNRD  AGP+D VQ+C+RKVRNKVIG IGDA+LSYN
Sbjct: 549  PPNMYDISGSAHFINKCDNGIVIHRNRDPEAGPVDLVQVCVRKVRNKVIGTIGDAYLSYN 608

Query: 292  RTTGEFVDIDDAA 254
            R TGE+ DID AA
Sbjct: 609  RVTGEYSDIDAAA 621


>ref|XP_012827508.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Erythranthe guttatus]
            gi|848927528|ref|XP_012827509.1| PREDICTED: twinkle
            homolog protein, chloroplastic/mitochondrial isoform X2
            [Erythranthe guttatus] gi|604299158|gb|EYU19093.1|
            hypothetical protein MIMGU_mgv1a002055mg [Erythranthe
            guttata]
          Length = 721

 Score =  949 bits (2453), Expect = 0.0
 Identities = 467/716 (65%), Positives = 556/716 (77%), Gaps = 18/716 (2%)
 Frame = -2

Query: 2341 LTTPESKRMPSLSYRLLSHNVLMGSKH--MLKCSPGTI---HLSSIHSRHFHTHLHLFST 2177
            L  P+ K + S         + MGSK+  +LK SP  +   H+ S+ SR  ++ +H F +
Sbjct: 2    LLLPQRKLLFSPHSNSTRRIIFMGSKNFLLLKFSPTPVTHAHIHSLDSRSCYSQIHFFRS 61

Query: 2176 NPEK--------PTSKIPHISLKKHGFCSFAPV----MHSRTVHLQPHEGERTDMDKLAV 2033
               +        P    P    +  G+ SF P     +      ++  E +  D  +L +
Sbjct: 62   RSNRKNPLLFPSPKHFSPIYQQRSSGY-SFTPSAAIPIPRPIAGVETLEKQSVDKKQLKL 120

Query: 2032 LKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGW 1853
            L+ KL++ GI    C PGQY+ ++CP C GG+S+E+S S+ I +DG  A+W+CFRAKCGW
Sbjct: 121  LRQKLQEIGIDGTDCLPGQYNGLVCPSCKGGDSQEKSLSLHITDDGGAAVWTCFRAKCGW 180

Query: 1852 RGHMRASVNGKG-YSSLEKSSKGKPYRVITEESLELQPLCDELIAYFAERMISGETLRRN 1676
            +G  RA  + K  Y+ +  + K K  RVITEESL L+PLC+EL+AYFAERMISGETLRRN
Sbjct: 181  KGTTRAFADVKSTYAKMNTTQKVKQPRVITEESLGLEPLCNELLAYFAERMISGETLRRN 240

Query: 1675 AVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIII 1496
             VMQ+   G+QIVIAFTYRRN +LISCKYR I KKFWQE +TEKI YG+DDIK+ASD+II
Sbjct: 241  YVMQKR-TGNQIVIAFTYRRNKELISCKYRDITKKFWQEANTEKIFYGLDDIKEASDVII 299

Query: 1495 VEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRII 1316
            VEGEMDKL+MEEAG+ NCVSVPDGAP +VS K L +E EDTKY YLWNCK+Y  KASRII
Sbjct: 300  VEGEMDKLAMEEAGFKNCVSVPDGAPPKVSNKSLASEEEDTKYTYLWNCKDYTAKASRII 359

Query: 1315 LATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEN 1136
            LATD D PGQ             RCWRVKWPKKNDT+  KDANEVLM++GP+ALR VIEN
Sbjct: 360  LATDGDPPGQALAEELARRLGRERCWRVKWPKKNDTESFKDANEVLMYMGPDALRGVIEN 419

Query: 1135 AELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNS 956
            AELYPIKGLF F DYFDE++ YYH++LGFE GVSTGW +LN+LYNVVPGELTIVTGVPNS
Sbjct: 420  AELYPIKGLFNFKDYFDEINDYYHQTLGFELGVSTGWTSLNDLYNVVPGELTIVTGVPNS 479

Query: 955  GKSEWIDALLCNINRSVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSV 776
            GKSEWIDALLCN+N SVGWKF LCSMENKVREHARKLLEKHI+KPFF+ RYGESVERMS 
Sbjct: 480  GKSEWIDALLCNLNHSVGWKFALCSMENKVREHARKLLEKHIKKPFFDVRYGESVERMST 539

Query: 775  EEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPP 596
            +EFE+GKKWL D+F LIRCE+DCLPSI WVL+LA+ AVLRHGV GLVIDPYNE+DHQRPP
Sbjct: 540  KEFERGKKWLGDSFSLIRCENDCLPSITWVLDLARIAVLRHGVNGLVIDPYNEIDHQRPP 599

Query: 595  NQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDN 416
            +QTETEYVSQMLTKIKRFAQHH+CHVWFVAHPRQLQ+WVG PPNLYDISGSAHFINKCDN
Sbjct: 600  SQTETEYVSQMLTKIKRFAQHHSCHVWFVAHPRQLQNWVGSPPNLYDISGSAHFINKCDN 659

Query: 415  GIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASR 248
            GIV+HRNRD  AGP+D VQ+C+RKVRNKV+G IGDA+LSYNR TGE++DI++ + +
Sbjct: 660  GIVIHRNRDPEAGPVDIVQVCVRKVRNKVVGTIGDAYLSYNRVTGEYMDINNTSGQ 715


>ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Prunus mume]
          Length = 698

 Score =  948 bits (2450), Expect = 0.0
 Identities = 457/682 (67%), Positives = 540/682 (79%), Gaps = 1/682 (0%)
 Frame = -2

Query: 2308 LSYRLLSHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKK 2129
            LS+   S  +LMG+  + K +P    L+      FH+H  +FS    KP SK   + L+ 
Sbjct: 12   LSFLTSSAGLLMGTVQLFKSTPCPNPLTPSQRHSFHSHRLVFSPLSPKPMSKTRPLCLRT 71

Query: 2128 HGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQC 1949
            +G+   +    +    L+  E +R D ++L+ LK+KLE  GI  G C PGQY+ ++CP C
Sbjct: 72   NGYSYVSHANGAAPAELENAEEKRVDFNQLSRLKLKLEMLGIDYGICMPGQYNHLICPIC 131

Query: 1948 GGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGK-GYSSLEKSSKGKPYRV 1772
             GG+S+E+S S++I ED   A W CFR KCGW+G   A  + K    +  + +K K  R 
Sbjct: 132  KGGDSEEKSLSVYISEDWGSAFWCCFRGKCGWQGRTTAVGDNKLSRETSNQIAKVKKKRE 191

Query: 1771 ITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCK 1592
            IT ESL L+PLC+EL+AYF+ER IS ETLRRNAVMQ++  G QI IAF Y R+G L+SCK
Sbjct: 192  ITVESLGLEPLCEELVAYFSERSISTETLRRNAVMQKT-TGVQICIAFPYWRDGMLVSCK 250

Query: 1591 YRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQ 1412
            YR I KKFWQEKDTE+I YG+DDIK  +DIIIVEGE+DKL+MEEAG+ NCVSVPDGAP++
Sbjct: 251  YRDIEKKFWQEKDTERIFYGLDDIKGTNDIIIVEGEIDKLAMEEAGFHNCVSVPDGAPAK 310

Query: 1411 VSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRV 1232
            VS K+LPAE +DTKYQYLWNCKEY++KASRIILATD D PGQ             RCWRV
Sbjct: 311  VSSKDLPAEEQDTKYQYLWNCKEYLKKASRIILATDGDEPGQALAEELARRLGRERCWRV 370

Query: 1231 KWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLG 1052
            +WP KND +  KDANEVLM+LGP+ L+EVIENAELYPI+GLF F++YFDE+DAYY+R+LG
Sbjct: 371  RWPMKNDNEHFKDANEVLMYLGPDVLKEVIENAELYPIRGLFNFANYFDELDAYYYRTLG 430

Query: 1051 FEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMEN 872
            +E+GVSTGW  LNELYN+VPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKF LCSMEN
Sbjct: 431  YEYGVSTGWKGLNELYNIVPGELTIVTGVPNSGKSEWIDALLCNLSESVGWKFALCSMEN 490

Query: 871  KVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIK 692
            KVREHARKLLEKHI+KPFF+ RYG S ERMS EEFEQGK+WLNDTF+LIRCEDD LPSI 
Sbjct: 491  KVREHARKLLEKHIKKPFFDKRYGGSAERMSAEEFEQGKQWLNDTFYLIRCEDDSLPSIS 550

Query: 691  WVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWF 512
            WVLELA+AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK+KRFAQHH CHVWF
Sbjct: 551  WVLELAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKVKRFAQHHCCHVWF 610

Query: 511  VAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNK 332
            VAHPRQL  WVGGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG LD+VQ+C+RKVRNK
Sbjct: 611  VAHPRQLHQWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPGAGVLDQVQVCVRKVRNK 670

Query: 331  VIGNIGDAFLSYNRTTGEFVDI 266
            V G IGDA+L+Y+R TG+F DI
Sbjct: 671  VAGTIGDAYLTYDRATGQFKDI 692


>ref|XP_007023031.1| Toprim domain-containing protein isoform 1 [Theobroma cacao]
            gi|508778397|gb|EOY25653.1| Toprim domain-containing
            protein isoform 1 [Theobroma cacao]
          Length = 705

 Score =  939 bits (2426), Expect = 0.0
 Identities = 461/707 (65%), Positives = 545/707 (77%), Gaps = 7/707 (0%)
 Frame = -2

Query: 2344 HLTTPESKRMPSLSYRLLSHNVLMGSK------HMLKCSPGTIHLSSIHSRHFHTHLHLF 2183
            H+      R+  LS    +   LM SK       +L  +P    LS+   R       L 
Sbjct: 7    HIRNNPRLRLHKLSLFSCNSAALMASKTFSSSFSLLPLTPSPKRLSTPCKR-------LV 59

Query: 2182 STNPEKPTSKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGI 2003
                 KP SK   +SL+ +GF S      S  V+ +  E    +M  L +LK KL++ GI
Sbjct: 60   PYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGI 119

Query: 2002 ACGSCKPGQYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNG 1823
               +C PG+ +R+LCP C GGES+E S S+FI +DG  A W CFRAKCGW+G  +A  +G
Sbjct: 120  DISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADG 179

Query: 1822 K-GYSSLEKSSKGKPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGD 1646
            K  Y++L + +K K  R IT ESL+L+PLC++LIAYFAERMIS ETL+RNAVMQ+   G+
Sbjct: 180  KPSYANLSRVNKVKVKREITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKS-GE 238

Query: 1645 QIVIAFTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSM 1466
            +I IAF Y R G L++CKYR I K+FWQEKDTEKI YG+DDI+ ASDIIIVEGE+DKL+M
Sbjct: 239  EIAIAFPYWRKGSLVNCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAM 298

Query: 1465 EEAGYFNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQ 1286
            EEAG+ NCVSVPDGAP  VS KE+PAE +DTKYQYLWNCKEY++KASRIILATD D PGQ
Sbjct: 299  EEAGFRNCVSVPDGAPPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQ 358

Query: 1285 XXXXXXXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLF 1106
                         RCWRVKWPKKN+ D  KDANEVLM+LGP  L++VIENAELYPI+GLF
Sbjct: 359  ALAEELARRLGRERCWRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLF 418

Query: 1105 RFSDYFDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALL 926
             F D+FDE+D YYHR+LG+EFGV TGW AL+ LYNVVPGELT+VTGVPNSGKSEWIDALL
Sbjct: 419  NFRDFFDEIDRYYHRTLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALL 478

Query: 925  CNINRSVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWL 746
            CN+N SVGWKF LCSMENKVR+HARKLLEK IRKPFF+  YG SVERMSVEE E+GKKWL
Sbjct: 479  CNLNESVGWKFALCSMENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWL 538

Query: 745  NDTFHLIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQ 566
            +DTF+L+RCE+D LPSIKWVL+LAKAAVLRHGVRGL+IDPYNELDHQRP +QTETEYVSQ
Sbjct: 539  SDTFYLVRCENDSLPSIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQ 598

Query: 565  MLTKIKRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDE 386
            MLTKIKRFAQHH+CHVWFVAHPRQL HW+G PPNLYDISGSAHFINKCDNGIV+HRNRD 
Sbjct: 599  MLTKIKRFAQHHSCHVWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDP 658

Query: 385  NAGPLDRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASRK 245
             AGP+D+VQ+C+RKVRNKV+G IGDAFLSY+R TG + DID+   ++
Sbjct: 659  EAGPVDQVQVCVRKVRNKVVGTIGDAFLSYDRVTGVYTDIDEPQKKQ 705


>ref|XP_009353864.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X2 [Pyrus x bretschneideri]
          Length = 698

 Score =  937 bits (2421), Expect = 0.0
 Identities = 459/677 (67%), Positives = 542/677 (80%), Gaps = 3/677 (0%)
 Frame = -2

Query: 2281 VLMGSKHMLKCSPGTIHLS-SIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAP 2105
            +LM SK +L  +P    L+ S H   FH+   +FS    KP  KI  + L+ +G+ S +P
Sbjct: 22   LLMASKQLLNSAPFPNPLTPSAHRHPFHSRSLVFSPISSKPVLKIRPLCLRTNGYSSLSP 81

Query: 2104 VMHSRTVHLQ-PHEGERTDMDKLAVLKMKLEKAGIACGSCK-PGQYSRMLCPQCGGGESK 1931
               +  V ++ P E   + M ++ +LK KLE  GI   +   PGQY+ ++CP C GG+S+
Sbjct: 82   AHVAEPVEVEAPKENGMSSM-QMRILKEKLENLGIDGETISVPGQYNHLICPMCKGGDSE 140

Query: 1930 ERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYSSLEKSSKGKPYRVITEESLE 1751
            E+S S+ I E+ + A+W CFR KCGW G  RA V   G     ++SK K  R ITEESL 
Sbjct: 141  EKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFV---GNRLPPETSKLKKKREITEESLG 197

Query: 1750 LQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKK 1571
            L+PLC+E++ YF+ERMIS  TL RNAVMQ+S  GDQI IAF YRR+G+L+SCKYR I+KK
Sbjct: 198  LEPLCEEIVDYFSERMISRGTLMRNAVMQKS-TGDQIAIAFPYRRDGKLVSCKYRDIDKK 256

Query: 1570 FWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELP 1391
            FWQEKDTEKI YG+DDIK  +DIIIVEGE+DKLSMEEAG+ NCVSVPDGAP +VS KELP
Sbjct: 257  FWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLSMEEAGFCNCVSVPDGAPPKVSSKELP 316

Query: 1390 AEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKND 1211
             E +DTKYQYLWNCKEY++KASRI+LATD D PGQ             RCWRVKWPKKND
Sbjct: 317  PEEKDTKYQYLWNCKEYLKKASRIVLATDGDGPGQALAEELARRLGRERCWRVKWPKKND 376

Query: 1210 TDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVST 1031
             +  KDANEVLM+LG + L+ VIE+AEL+PI+GLF F++YFDE+DAYYHR+LG+E+GVST
Sbjct: 377  KENFKDANEVLMYLGSDVLKGVIEDAELFPIRGLFNFANYFDELDAYYHRTLGYEYGVST 436

Query: 1030 GWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHAR 851
            GW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKFVLCSMENKVREHAR
Sbjct: 437  GWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLSASVGWKFVLCSMENKVREHAR 496

Query: 850  KLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAK 671
            KLLEKHI+KPFF+ RYG S ERMSVEEFEQGKKWLNDTF+LIRCEDD LP+I WVL+LA+
Sbjct: 497  KLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKWLNDTFYLIRCEDDSLPNISWVLDLAQ 556

Query: 670  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQL 491
            AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH CHVWFVAHPRQL
Sbjct: 557  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHCCHVWFVAHPRQL 616

Query: 490  QHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGD 311
              W GGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG +D+VQ+C+RKVRNKV G IGD
Sbjct: 617  HQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGEMDQVQVCVRKVRNKVAGTIGD 676

Query: 310  AFLSYNRTTGEFVDIDD 260
            AFLSY+R TG+F+D+++
Sbjct: 677  AFLSYDRATGQFMDVEN 693


>emb|CDP12599.1| unnamed protein product [Coffea canephora]
          Length = 699

 Score =  936 bits (2418), Expect = 0.0
 Identities = 462/689 (67%), Positives = 547/689 (79%), Gaps = 12/689 (1%)
 Frame = -2

Query: 2293 LSHNVLM-GSKHM--LKCSPGTIHLSSIHSRHFHTHLH-------LFSTNPEKPTSKIPH 2144
            +S+N +M GSKH+  LK S     L+   + +F++  +       LFST   KP S I  
Sbjct: 13   ISNNFIMAGSKHLVFLKSSLFFPTLTPPKAANFYSQTYPFTAKKLLFSTILAKPRSPI-F 71

Query: 2143 ISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRM 1964
                +  +   AP+   R V L+  E +  D  +L  L++KLEK G+   SC PGQY+ +
Sbjct: 72   CRKSRLSYTPLAPI--PRPVSLETGEEDVIDSAELRFLRVKLEKLGLNAESCMPGQYNGL 129

Query: 1963 LCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKG-YSSLEKSSKG 1787
            +CP C GG+S E+S S+FI ++G+ AMW+CFRAKCGW+G  RA  +GK  Y +L   S  
Sbjct: 130  ICPMCKGGDSMEKSLSLFITQEGDAAMWNCFRAKCGWKGSTRAFADGKSTYGNLSMISIV 189

Query: 1786 K-PYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNG 1610
            K P+R I+EESL L+PL +EL  YF+ERMISGETLRRN+VMQR Y  +Q VIAFTY R G
Sbjct: 190  KQPHREISEESLGLEPLSNELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWREG 249

Query: 1609 QLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVP 1430
             L+SCKYR   K FWQE +TEKI YG+DDIK ASDIIIVEGEMDKLSMEEAG+ NCVSVP
Sbjct: 250  VLVSCKYRDSTKNFWQEINTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVSVP 309

Query: 1429 DGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXX 1250
            DGAP +VS K+LPAE +DTKYQYLWNCKEY++KASRIILATD D PGQ            
Sbjct: 310  DGAPPKVSDKDLPAEEKDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEELARRLGR 369

Query: 1249 XRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAY 1070
             RCWRV+WPKKND +  KDANEVLMFLGP  LREVIENAELYPI+GLF F ++F ++DAY
Sbjct: 370  ERCWRVRWPKKNDVEHFKDANEVLMFLGPGVLREVIENAELYPIRGLFDFKNFFVDIDAY 429

Query: 1069 YHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFV 890
            YH++LG+E GVSTGW AL++LYNVVPGELT+VTGVPNSGKSEWIDALLCN+NR VGWKF 
Sbjct: 430  YHQTLGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNRRVGWKFA 489

Query: 889  LCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDD 710
             CSMEN+VREHARKLLEKH+RKPFF+ RYG+S+ERMS EE E+GK WLN+TF+LIRCE+D
Sbjct: 490  FCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMSREELEEGKVWLNETFYLIRCEND 549

Query: 709  CLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH 530
            CLP+I WVL+LA+AAVLRHG+ GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH
Sbjct: 550  CLPNINWVLDLARAAVLRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQHH 609

Query: 529  ACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICI 350
            +CHVWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIVVHRNRD   GP+D+VQ+C+
Sbjct: 610  SCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDPGVGPIDQVQVCV 669

Query: 349  RKVRNKVIGNIGDAFLSYNRTTGEFVDID 263
            RKVRNKVIG IG+A+LSYNR TGE++DID
Sbjct: 670  RKVRNKVIGTIGEAWLSYNRVTGEYMDID 698


>ref|XP_008383370.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Malus domestica]
          Length = 698

 Score =  936 bits (2418), Expect = 0.0
 Identities = 459/677 (67%), Positives = 542/677 (80%), Gaps = 3/677 (0%)
 Frame = -2

Query: 2281 VLMGSKHMLKCSPGTIHLS-SIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAP 2105
            +LM SK +LK +P    L+ S H   FH+   +FS    KP  KI  + L+ +G+ S +P
Sbjct: 22   LLMASKQLLKSAPFPNPLTPSAHRHPFHSRSLVFSPISSKPVLKIRPLCLRTNGYSSLSP 81

Query: 2104 VMHSRTVHLQ-PHEGERTDMDKLAVLKMKLEKAGIACGSCK-PGQYSRMLCPQCGGGESK 1931
               +  V ++ P E   + M ++ +LK KLE  GI   +   PGQY+ ++CP C GG+S+
Sbjct: 82   AHVAEPVEVETPKENGMSSM-QMRILKEKLENLGIDGETISVPGQYNHLICPMCKGGDSE 140

Query: 1930 ERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYSSLEKSSKGKPYRVITEESLE 1751
            E+S S+ I E+ + A+W CFR KCGW G  RA V   G     ++SK K    ITEESL 
Sbjct: 141  EKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFV---GNRLPPETSKLKKKXXITEESLG 197

Query: 1750 LQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKK 1571
            L+PLC+E+I YF+ERMIS  TL RNAVMQ+S  GDQI IAF YRR+G+L+SCKYR I+KK
Sbjct: 198  LEPLCEEIIDYFSERMISRGTLMRNAVMQKS-TGDQIAIAFPYRRDGKLVSCKYRDIDKK 256

Query: 1570 FWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELP 1391
            FWQEKDTEKI YG+DDIK  +DIIIVEGE+DKL+MEEAG+ NCVSVPDGAP +VS KELP
Sbjct: 257  FWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLAMEEAGFRNCVSVPDGAPPKVSSKELP 316

Query: 1390 AEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKND 1211
             E +DTKYQYLWNCKEY++KASRI+LATD D PGQ             RCWRVKWPKKND
Sbjct: 317  PEEKDTKYQYLWNCKEYLKKASRIVLATDGDVPGQALAEELARRLGRERCWRVKWPKKND 376

Query: 1210 TDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVST 1031
             +  KDANEVLM+LG + L+ VIE+AEL+PI+GLF F++YFDE+DAYYHR+LG+E+GVST
Sbjct: 377  KENFKDANEVLMYLGSDVLKGVIEDAELFPIRGLFNFANYFDELDAYYHRTLGYEYGVST 436

Query: 1030 GWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHAR 851
            GW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKFVLCSMENKVREHAR
Sbjct: 437  GWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLSASVGWKFVLCSMENKVREHAR 496

Query: 850  KLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAK 671
            KLLEKHI+KPFF+ RYG S ERMSVEEFEQGKKWLNDTF+LIRCEDD LP+I WVL+LA+
Sbjct: 497  KLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKWLNDTFYLIRCEDDSLPNISWVLDLAQ 556

Query: 670  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQL 491
            AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH CHVWFVAHPRQL
Sbjct: 557  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHCCHVWFVAHPRQL 616

Query: 490  QHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGD 311
              W GGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG +D+VQ+C+RKVRNKV G IGD
Sbjct: 617  HQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGEIDQVQVCVRKVRNKVAGTIGD 676

Query: 310  AFLSYNRTTGEFVDIDD 260
            AFLSY+R TG+F+D+++
Sbjct: 677  AFLSYDRATGQFMDVEN 693


>ref|XP_002268852.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Vitis vinifera] gi|297740887|emb|CBI31069.3| unnamed
            protein product [Vitis vinifera]
          Length = 705

 Score =  936 bits (2418), Expect = 0.0
 Identities = 460/680 (67%), Positives = 529/680 (77%), Gaps = 1/680 (0%)
 Frame = -2

Query: 2290 SHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSF 2111
            S  +LM SKH+LK +P T+ L    S        + S  P KP S+I  ISLK       
Sbjct: 30   SRTILMASKHLLKPTPSTLPLKLNLSSP-----GIISAFPLKPNSRILPISLKTFALPYT 84

Query: 2110 APVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESK 1931
            +       V+ +  E       +L VLK KLE  G      K GQYS + CP C GG+S 
Sbjct: 85   SHSNVPGPVYSENPEDTSNSSARLNVLKKKLEVIGFDTQMLKTGQYSHLTCPTCKGGDSM 144

Query: 1930 ERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVN-GKGYSSLEKSSKGKPYRVITEESL 1754
            E+S S+FI  DG+ A+W C R KCG RG++RA VN    Y  L + +K KP R ITEESL
Sbjct: 145  EKSLSLFITLDGDHAVWMCHRGKCGSRGNIRAFVNDSSSYGRLNQITKIKPKREITEESL 204

Query: 1753 ELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINK 1574
             L+PLC EL+AYF ERMIS +TL RN+VMQ+SY GDQ +IAFTYRRNG L+SCKYR +NK
Sbjct: 205  GLKPLCSELVAYFGERMISEKTLARNSVMQKSY-GDQFIIAFTYRRNGVLVSCKYRDVNK 263

Query: 1573 KFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKEL 1394
             FWQEKDTEKI YGVDDIK+ASDIIIVEGE+DKLSMEEAG++NCVSVPDGAP  VS K  
Sbjct: 264  NFWQEKDTEKIFYGVDDIKEASDIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVSTKVF 323

Query: 1393 PAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKN 1214
             +  +D KYQYLWNCKEY+EKASRIILATD DAPG              RCWRVKWPKKN
Sbjct: 324  ESAEKDIKYQYLWNCKEYLEKASRIILATDGDAPGLALAEELARRLGRERCWRVKWPKKN 383

Query: 1213 DTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVS 1034
            + +  KDANEVLM+LGP+ L+EVIENAE+YPI+GLF FS YF+E+D YYH +LGFE GVS
Sbjct: 384  EVEHFKDANEVLMYLGPDVLKEVIENAEIYPIQGLFNFSHYFNEIDGYYHHTLGFELGVS 443

Query: 1033 TGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHA 854
            TGW  LN LYNVVPGELT+VTGVPNSGKSEWIDALLCNINRSVGW F LCSMENKVREHA
Sbjct: 444  TGWRGLNGLYNVVPGELTVVTGVPNSGKSEWIDALLCNINRSVGWSFALCSMENKVREHA 503

Query: 853  RKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELA 674
            RKLLEKHI+KPFF A YGES+ERM+VEEFE GKKWL++TF+LIRCE D LP+IKWVL+LA
Sbjct: 504  RKLLEKHIKKPFFKAGYGESIERMTVEEFELGKKWLSETFYLIRCEKDSLPNIKWVLDLA 563

Query: 673  KAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQ 494
            K+AVLRHGVRGLVIDPYNELDHQRPP QTETEYVSQMLT IKRFAQHH+CHVWFVAHPRQ
Sbjct: 564  KSAVLRHGVRGLVIDPYNELDHQRPPGQTETEYVSQMLTMIKRFAQHHSCHVWFVAHPRQ 623

Query: 493  LQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIG 314
            L  W GGPPN+YDISGSAHFINKCDNGIV+HRNR+  AGP+D+VQ+C+RKVRNKV+G IG
Sbjct: 624  LHQWNGGPPNMYDISGSAHFINKCDNGIVIHRNRNPEAGPVDQVQVCVRKVRNKVVGTIG 683

Query: 313  DAFLSYNRTTGEFVDIDDAA 254
            DAFLSY+R +G + DID+ +
Sbjct: 684  DAFLSYDRISGVYTDIDETS 703


>ref|XP_004231556.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Solanum lycopersicum]
          Length = 697

 Score =  932 bits (2410), Expect = 0.0
 Identities = 461/682 (67%), Positives = 534/682 (78%), Gaps = 5/682 (0%)
 Frame = -2

Query: 2290 SHNVLMGSKHMLKCSPGTIHLSSIHSRH---FHTHLHLFSTNPEKPTSKIPHISLKKHGF 2120
            S+N +MGSK+ L     +I L +I+      F T   +FS    KP S     S   +  
Sbjct: 14   SNNFVMGSKYFLH--KPSITLPTIYKSIPVLFKTQRLIFSAFASKPISPNRGTSSFSYRP 71

Query: 2119 CSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGG 1940
                P +    V L+  + + T+ D    LK KL + GI  GSC PGQY+ +LCP C GG
Sbjct: 72   QRIPPPVSVSGVMLEDPKEDITESDHEKALKQKLSQVGIDIGSCGPGQYNGLLCPMCKGG 131

Query: 1939 ESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGK-GYSSLEKSSK-GKPYRVIT 1766
             S E+S S+FI  DG  A W+CFRAKCGWRG  RA  + +  ++ +++  K  K YR IT
Sbjct: 132  GSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFADVRTAFADMKRIGKVNKKYRQIT 191

Query: 1765 EESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYR 1586
            EESL L+PLCD L+ YF+ERMIS ETLRRNAVMQ+ + GDQ+VIAFTYRR+G L+SCKYR
Sbjct: 192  EESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRH-GDQVVIAFTYRRDGALVSCKYR 250

Query: 1585 GINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVS 1406
             + KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP  +S
Sbjct: 251  NMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSIS 310

Query: 1405 KKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKW 1226
             K+LP   +DTKYQYLWNCKEY+EK SRIILATD D PGQ             RCWRV W
Sbjct: 311  DKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPPGQALAEELARRLGRERCWRVTW 370

Query: 1225 PKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFE 1046
            PKK+  D  KDANEVLM LGP ALREVIE AELYPI+GLF F++YF E+DAYYH+++G+E
Sbjct: 371  PKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLFNFNNYFTEIDAYYHQTIGYE 430

Query: 1045 FGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKV 866
             GV TGW +LN LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SVGWKF LCSMEN+V
Sbjct: 431  LGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNYSVGWKFALCSMENRV 490

Query: 865  REHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWV 686
            REHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GK+WL+DTF LIRCE+DCLP+I WV
Sbjct: 491  REHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWLSDTFFLIRCENDCLPNIDWV 550

Query: 685  LELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVA 506
            L LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CHVWFVA
Sbjct: 551  LSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRFAQHHSCHVWFVA 610

Query: 505  HPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVI 326
            HPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+VQ+C+RKVRNKV 
Sbjct: 611  HPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVS 670

Query: 325  GNIGDAFLSYNRTTGEFVDIDD 260
            G IGDAFLSY+R TGEF+DID+
Sbjct: 671  GTIGDAFLSYDRVTGEFMDIDE 692


>ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            [Solanum tuberosum]
          Length = 695

 Score =  932 bits (2409), Expect = 0.0
 Identities = 466/695 (67%), Positives = 539/695 (77%), Gaps = 9/695 (1%)
 Frame = -2

Query: 2317 MPSLSYRLL----SHNVLMGSKHMLKCSPGTIHLSSIHSRH---FHTHLHLFSTNPEKPT 2159
            M  L YR +    S+N +MGSK+ L     +I L +I+      F T   +FS    KP 
Sbjct: 1    MKFLPYRRIVVNNSNNFVMGSKYFLH--KPSITLPTIYKSIPVLFQTQRLIFSAFASKPI 58

Query: 2158 SKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPG 1979
            S     S   +      P +    V L+  + E  + D    LK KL + GI  GSC PG
Sbjct: 59   SPNRGTSSFSYRPQRIPPPVSG--VMLEDPKEEIAESDHEKALKQKLSQVGIDIGSCGPG 116

Query: 1978 QYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGK-GYSSLE 1802
            QY+ +LCP C GG S E+S S+FI  DG  A W+CFRAKCGWRG  RA  + +  ++ ++
Sbjct: 117  QYNGLLCPMCKGGGSNEKSLSLFITPDGHAATWTCFRAKCGWRGGTRAFADVRTAFADMK 176

Query: 1801 KSSK-GKPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFT 1625
            +  K  K YR ITEESL L+PLCD L+ YF+ERMIS ETLRRNAVMQ+ + GDQ+VIAFT
Sbjct: 177  RIGKVKKKYRQITEESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRH-GDQVVIAFT 235

Query: 1624 YRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFN 1445
            YRR+G L+SCKYR + KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ N
Sbjct: 236  YRRDGALVSCKYRNMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRN 295

Query: 1444 CVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXX 1265
            CVSVPDGAP  +S K+LP   +DTKYQYLWNCKEY+EKASRIILATD D PGQ       
Sbjct: 296  CVSVPDGAPPSISDKDLPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQALAEELA 355

Query: 1264 XXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFD 1085
                  RCWRV WPKK+  D  KDANEVLM LGP ALREVIE AELYPI+GLF F +YF 
Sbjct: 356  RRLGRERCWRVTWPKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLFDFKNYFT 415

Query: 1084 EVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSV 905
            E+DAYYH+++G+E GV TGW +LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SV
Sbjct: 416  EIDAYYHQTIGYELGVPTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNHSV 475

Query: 904  GWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLI 725
            GWKF LCSMEN+VREHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GK+WL+DTF LI
Sbjct: 476  GWKFALCSMENRVREHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWLSDTFFLI 535

Query: 724  RCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKR 545
            RCE+DCLP+I WVL LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKR
Sbjct: 536  RCENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKR 595

Query: 544  FAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDR 365
            FAQHH+CHVWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+
Sbjct: 596  FAQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQ 655

Query: 364  VQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDD 260
            VQ+C+RKVRNKV G IGDAFLSY+R TGEF+DID+
Sbjct: 656  VQVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDIDE 690


>ref|XP_009353863.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Pyrus x bretschneideri]
          Length = 710

 Score =  931 bits (2406), Expect = 0.0
 Identities = 460/689 (66%), Positives = 544/689 (78%), Gaps = 15/689 (2%)
 Frame = -2

Query: 2281 VLMGSKHMLKCSPGTIHLS-SIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAP 2105
            +LM SK +L  +P    L+ S H   FH+   +FS    KP  KI  + L+ +G+ S +P
Sbjct: 22   LLMASKQLLNSAPFPNPLTPSAHRHPFHSRSLVFSPISSKPVLKIRPLCLRTNGYSSLSP 81

Query: 2104 V------------MHSRTVHLQ-PHEGERTDMDKLAVLKMKLEKAGIACGSCK-PGQYSR 1967
                         + S+ V ++ P E   + M ++ +LK KLE  GI   +   PGQY+ 
Sbjct: 82   AHVAEPGKFRRKFVLSKEVEVEAPKENGMSSM-QMRILKEKLENLGIDGETISVPGQYNH 140

Query: 1966 MLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKGYSSLEKSSKG 1787
            ++CP C GG+S+E+S S+ I E+ + A+W CFR KCGW G  RA V   G     ++SK 
Sbjct: 141  LICPMCKGGDSEEKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFV---GNRLPPETSKL 197

Query: 1786 KPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQ 1607
            K  R ITEESL L+PLC+E++ YF+ERMIS  TL RNAVMQ+S  GDQI IAF YRR+G+
Sbjct: 198  KKKREITEESLGLEPLCEEIVDYFSERMISRGTLMRNAVMQKS-TGDQIAIAFPYRRDGK 256

Query: 1606 LISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPD 1427
            L+SCKYR I+KKFWQEKDTEKI YG+DDIK  +DIIIVEGE+DKLSMEEAG+ NCVSVPD
Sbjct: 257  LVSCKYRDIDKKFWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLSMEEAGFCNCVSVPD 316

Query: 1426 GAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXX 1247
            GAP +VS KELP E +DTKYQYLWNCKEY++KASRI+LATD D PGQ             
Sbjct: 317  GAPPKVSSKELPPEEKDTKYQYLWNCKEYLKKASRIVLATDGDGPGQALAEELARRLGRE 376

Query: 1246 RCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYY 1067
            RCWRVKWPKKND +  KDANEVLM+LG + L+ VIE+AEL+PI+GLF F++YFDE+DAYY
Sbjct: 377  RCWRVKWPKKNDKENFKDANEVLMYLGSDVLKGVIEDAELFPIRGLFNFANYFDELDAYY 436

Query: 1066 HRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVL 887
            HR+LG+E+GVSTGW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKFVL
Sbjct: 437  HRTLGYEYGVSTGWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLSASVGWKFVL 496

Query: 886  CSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDC 707
            CSMENKVREHARKLLEKHI+KPFF+ RYG S ERMSVEEFEQGKKWLNDTF+LIRCEDD 
Sbjct: 497  CSMENKVREHARKLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKWLNDTFYLIRCEDDS 556

Query: 706  LPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHA 527
            LP+I WVL+LA+AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH 
Sbjct: 557  LPNISWVLDLAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHC 616

Query: 526  CHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIR 347
            CHVWFVAHPRQL  W GGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG +D+VQ+C+R
Sbjct: 617  CHVWFVAHPRQLHQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGEMDQVQVCVR 676

Query: 346  KVRNKVIGNIGDAFLSYNRTTGEFVDIDD 260
            KVRNKV G IGDAFLSY+R TG+F+D+++
Sbjct: 677  KVRNKVAGTIGDAFLSYDRATGQFMDVEN 705


>ref|XP_010315626.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X2 [Solanum lycopersicum]
          Length = 695

 Score =  929 bits (2402), Expect = 0.0
 Identities = 461/682 (67%), Positives = 534/682 (78%), Gaps = 5/682 (0%)
 Frame = -2

Query: 2290 SHNVLMGSKHMLKCSPGTIHLSSIHSRH---FHTHLHLFSTNPEKPTSKIPHISLKKHGF 2120
            S+N +MGSK+ L     +I L +I+      F T   +FS    KP S     S   +  
Sbjct: 14   SNNFVMGSKYFLH--KPSITLPTIYKSIPVLFKTQRLIFSAFASKPISPNRGTSSFSYRP 71

Query: 2119 CSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGG 1940
                P +    V L+  + + T+ D    LK KL + GI  GSC PGQY+ +LCP C GG
Sbjct: 72   QRIPPPVSG--VMLEDPKEDITESDHEKALKQKLSQVGIDIGSCGPGQYNGLLCPMCKGG 129

Query: 1939 ESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGK-GYSSLEKSSK-GKPYRVIT 1766
             S E+S S+FI  DG  A W+CFRAKCGWRG  RA  + +  ++ +++  K  K YR IT
Sbjct: 130  GSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFADVRTAFADMKRIGKVNKKYRQIT 189

Query: 1765 EESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYR 1586
            EESL L+PLCD L+ YF+ERMIS ETLRRNAVMQ+ + GDQ+VIAFTYRR+G L+SCKYR
Sbjct: 190  EESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRH-GDQVVIAFTYRRDGALVSCKYR 248

Query: 1585 GINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVS 1406
             + KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP  +S
Sbjct: 249  NMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSIS 308

Query: 1405 KKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKW 1226
             K+LP   +DTKYQYLWNCKEY+EK SRIILATD D PGQ             RCWRV W
Sbjct: 309  DKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPPGQALAEELARRLGRERCWRVTW 368

Query: 1225 PKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFE 1046
            PKK+  D  KDANEVLM LGP ALREVIE AELYPI+GLF F++YF E+DAYYH+++G+E
Sbjct: 369  PKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLFNFNNYFTEIDAYYHQTIGYE 428

Query: 1045 FGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKV 866
             GV TGW +LN LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SVGWKF LCSMEN+V
Sbjct: 429  LGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNYSVGWKFALCSMENRV 488

Query: 865  REHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWV 686
            REHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GK+WL+DTF LIRCE+DCLP+I WV
Sbjct: 489  REHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWLSDTFFLIRCENDCLPNIDWV 548

Query: 685  LELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVA 506
            L LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CHVWFVA
Sbjct: 549  LSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRFAQHHSCHVWFVA 608

Query: 505  HPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVI 326
            HPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+VQ+C+RKVRNKV 
Sbjct: 609  HPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVS 668

Query: 325  GNIGDAFLSYNRTTGEFVDIDD 260
            G IGDAFLSY+R TGEF+DID+
Sbjct: 669  GTIGDAFLSYDRVTGEFMDIDE 690


>ref|XP_011039292.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Populus euphratica]
          Length = 715

 Score =  927 bits (2396), Expect = 0.0
 Identities = 459/687 (66%), Positives = 531/687 (77%), Gaps = 9/687 (1%)
 Frame = -2

Query: 2296 LLSHNVLMGSKHMLKCSPGTIH-----LSSIHSRHFHTHLHLFSTN-PEKPTSKIPHISL 2135
            L S +  MGSK +LK +  T       L S + + + T   L       KPTSK     L
Sbjct: 20   LSSFHYYMGSKFLLKPTTSTFPTPLPLLPSSNKQQYRTFKRLSPVFCSSKPTSKFSRSLL 79

Query: 2134 KKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCP 1955
             +     F+P+  S  V+    E +++   KL +L+ KL + GI      PGQY+ + CP
Sbjct: 80   TQTNGLPFSPL--SAPVYGLDPEVKKS---KLEILRFKLAEVGIELDHFAPGQYNALTCP 134

Query: 1954 QCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNGKG-YSSLEKSSKGKPY 1778
             C GG SKE+SFS+FI  DG  A W+CFRAKCGW G  +     K  Y +  K SK K  
Sbjct: 135  MCKGGGSKEKSFSLFISADGGNASWNCFRAKCGWNGGTKPFAGSKSTYGTSLKLSKVKEI 194

Query: 1777 RVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGD--QIVIAFTYRRNGQL 1604
            R ITE+SLEL+PLCDEL+ YF ER+IS ETL RN VMQ+ Y GD  Q+ IAFTYRRNG L
Sbjct: 195  REITEQSLELEPLCDELVCYFKERLISAETLARNQVMQKGY-GDRGQVAIAFTYRRNGVL 253

Query: 1603 ISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDG 1424
            +SCKYR INK+FWQEKDTEK+ YG+DDIK A +IIIVEGEMDKL+MEEAG+ NCVSVPDG
Sbjct: 254  VSCKYRDINKRFWQEKDTEKVFYGLDDIKGADEIIIVEGEMDKLAMEEAGFRNCVSVPDG 313

Query: 1423 APSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXR 1244
            AP  VS KELP   EDTKYQYLWNCKEY++K SRIILATD D PGQ             R
Sbjct: 314  APPSVSPKELPPNQEDTKYQYLWNCKEYLDKVSRIILATDGDPPGQALAEELARRLGRER 373

Query: 1243 CWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYH 1064
            CWRVKWPKKN  +  KDANEVLMF GP ALR++IENAELYPI+GLF FSDYF E+DAYY+
Sbjct: 374  CWRVKWPKKNTDEHFKDANEVLMFSGPLALRDIIENAELYPIRGLFHFSDYFPEIDAYYN 433

Query: 1063 RSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLC 884
            R+LG+EFG STGW ALNE+YNV+PGELT+VTGVPNSGKSEWIDALLCN+N SVGWKF LC
Sbjct: 434  RTLGYEFGASTGWTALNEIYNVMPGELTLVTGVPNSGKSEWIDALLCNLNESVGWKFALC 493

Query: 883  SMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCL 704
            SMEN VR+HARKLLEKH++KPFF+ARYGES ERMS EE E+GK+WL+DTF+LIRCEDD L
Sbjct: 494  SMENNVRQHARKLLEKHMKKPFFDARYGESAERMSAEELEEGKQWLSDTFYLIRCEDDAL 553

Query: 703  PSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHAC 524
            P+IKWVL+LA+AAVLRHGVRGLVIDPYNELDHQRPPN TETEYVSQMLT IKRFAQHHAC
Sbjct: 554  PNIKWVLDLARAAVLRHGVRGLVIDPYNELDHQRPPNMTETEYVSQMLTLIKRFAQHHAC 613

Query: 523  HVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRK 344
            HVW VAHPRQLQ+W G PPNLYDISGSAHF+NKCDNGIV+HRNR+ NAGP+D+VQ+ +RK
Sbjct: 614  HVWLVAHPRQLQNWTGQPPNLYDISGSAHFVNKCDNGIVIHRNRNPNAGPIDQVQVLVRK 673

Query: 343  VRNKVIGNIGDAFLSYNRTTGEFVDID 263
            VRNKV G IGDAFLSYNR TGEF+++D
Sbjct: 674  VRNKVAGTIGDAFLSYNRVTGEFMNVD 700


>ref|XP_007023033.1| Toprim domain-containing protein isoform 3 [Theobroma cacao]
            gi|508778399|gb|EOY25655.1| Toprim domain-containing
            protein isoform 3 [Theobroma cacao]
          Length = 712

 Score =  927 bits (2396), Expect = 0.0
 Identities = 456/693 (65%), Positives = 537/693 (77%), Gaps = 7/693 (1%)
 Frame = -2

Query: 2344 HLTTPESKRMPSLSYRLLSHNVLMGSK------HMLKCSPGTIHLSSIHSRHFHTHLHLF 2183
            H+      R+  LS    +   LM SK       +L  +P    LS+   R       L 
Sbjct: 7    HIRNNPRLRLHKLSLFSCNSAALMASKTFSSSFSLLPLTPSPKRLSTPCKR-------LV 59

Query: 2182 STNPEKPTSKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGERTDMDKLAVLKMKLEKAGI 2003
                 KP SK   +SL+ +GF S      S  V+ +  E    +M  L +LK KL++ GI
Sbjct: 60   PYLSSKPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGI 119

Query: 2002 ACGSCKPGQYSRMLCPQCGGGESKERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVNG 1823
               +C PG+ +R+LCP C GGES+E S S+FI +DG  A W CFRAKCGW+G  +A  +G
Sbjct: 120  DISACVPGRENRLLCPSCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADG 179

Query: 1822 K-GYSSLEKSSKGKPYRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGD 1646
            K  Y++L + +K K  R IT ESL+L+PLC++LIAYFAERMIS ETL+RNAVMQ+   G+
Sbjct: 180  KPSYANLSRVNKVKVKREITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKS-GE 238

Query: 1645 QIVIAFTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSM 1466
            +I IAF Y R G L++CKYR I K+FWQEKDTEKI YG+DDI+ ASDIIIVEGE+DKL+M
Sbjct: 239  EIAIAFPYWRKGSLVNCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAM 298

Query: 1465 EEAGYFNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYIEKASRIILATDADAPGQ 1286
            EEAG+ NCVSVPDGAP  VS KE+PAE +DTKYQYLWNCKEY++KASRIILATD D PGQ
Sbjct: 299  EEAGFRNCVSVPDGAPPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQ 358

Query: 1285 XXXXXXXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIENAELYPIKGLF 1106
                         RCWRVKWPKKN+ D  KDANEVLM+LGP  L++VIENAELYPI+GLF
Sbjct: 359  ALAEELARRLGRERCWRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLF 418

Query: 1105 RFSDYFDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALL 926
             F D+FDE+D YYHR+LG+EFGV TGW AL+ LYNVVPGELT+VTGVPNSGKSEWIDALL
Sbjct: 419  NFRDFFDEIDRYYHRTLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALL 478

Query: 925  CNINRSVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSVEEFEQGKKWL 746
            CN+N SVGWKF LCSMENKVR+HARKLLEK IRKPFF+  YG SVERMSVEE E+GKKWL
Sbjct: 479  CNLNESVGWKFALCSMENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWL 538

Query: 745  NDTFHLIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQ 566
            +DTF+L+RCE+D LPSIKWVL+LAKAAVLRHGVRGL+IDPYNELDHQRP +QTETEYVSQ
Sbjct: 539  SDTFYLVRCENDSLPSIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQ 598

Query: 565  MLTKIKRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDE 386
            MLTKIKRFAQHH+CHVWFVAHPRQL HW+G PPNLYDISGSAHFINKCDNGIV+HRNRD 
Sbjct: 599  MLTKIKRFAQHHSCHVWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDP 658

Query: 385  NAGPLDRVQICIRKVRNKVIGNIGDAFLSYNRT 287
             AGP+D+VQ+C+RKVRNKV+G IGDAFLSY+R+
Sbjct: 659  EAGPVDQVQVCVRKVRNKVVGTIGDAFLSYDRS 691


>ref|XP_006468363.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            [Citrus sinensis] gi|641858869|gb|KDO77591.1|
            hypothetical protein CISIN_1g005204mg [Citrus sinensis]
            gi|641858870|gb|KDO77592.1| hypothetical protein
            CISIN_1g005204mg [Citrus sinensis]
          Length = 709

 Score =  927 bits (2395), Expect = 0.0
 Identities = 442/602 (73%), Positives = 505/602 (83%), Gaps = 1/602 (0%)
 Frame = -2

Query: 2068 EGERTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESKERSFSIFIREDGEL 1889
            E +  D     +LK+KL++ G+  G C PG  +RMLCP+C GG+S+E S S+F+ EDG  
Sbjct: 108  EEKMLDSRSWEILKIKLKQLGLDIGRCAPGVENRMLCPKCNGGDSEELSLSLFLDEDGFS 167

Query: 1888 AMWSCFRAKCGWRGHMRASV-NGKGYSSLEKSSKGKPYRVITEESLELQPLCDELIAYFA 1712
            A+W CFRAKCGW+G   A V N +  SSL+K SK K  R ITE+SLEL+PL +EL AYFA
Sbjct: 168  AVWMCFRAKCGWKGSTSALVDNNRSQSSLKKFSKMKTIREITEDSLELEPLGNELRAYFA 227

Query: 1711 ERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKKFWQEKDTEKILYG 1532
            ER+IS ETLRRN VMQ+ + G ++VIAF Y RNG+L++CKYR  NKKFWQEKDTEK+ YG
Sbjct: 228  ERLISAETLRRNRVMQKRH-GHEVVIAFPYWRNGKLVNCKYRDFNKKFWQEKDTEKVFYG 286

Query: 1531 VDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWN 1352
            +DDI+  SDIIIVEGEMDKLSMEEAG+ NCVSVPDGAPS VSKK +P+E +DTKYQYLWN
Sbjct: 287  LDDIEGESDIIIVEGEMDKLSMEEAGFLNCVSVPDGAPSSVSKKNVPSEEQDTKYQYLWN 346

Query: 1351 CKEYIEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMF 1172
            CK Y+++ASRIILATD D PGQ             RCWRV+WPKKND D  KDANEVLM+
Sbjct: 347  CKMYLKQASRIILATDGDPPGQALAEELARRVGRERCWRVRWPKKNDVDHFKDANEVLMY 406

Query: 1171 LGPEALREVIENAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVSTGWMALNELYNVVP 992
            LGP AL+EV+ENAELYPI GLF F DYFDE+DAYYHR+ G EFG+STGW ALNELYNV+P
Sbjct: 407  LGPGALKEVVENAELYPIMGLFNFRDYFDEIDAYYHRTSGDEFGISTGWRALNELYNVLP 466

Query: 991  GELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHARKLLEKHIRKPFFN 812
            GELTIVTGVPNSGKSEWIDAL+CNIN   GWKFVLCSMENKVREHARKLLEKHI+KPFF 
Sbjct: 467  GELTIVTGVPNSGKSEWIDALICNINEHAGWKFVLCSMENKVREHARKLLEKHIKKPFFE 526

Query: 811  ARYGESVERMSVEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVI 632
            A YG S ERM+VEEFEQGK WL++TF LIRCE+D LPSIKWVL+LAKAAVLRHGVRGLVI
Sbjct: 527  ANYGGSAERMTVEEFEQGKAWLSNTFSLIRCENDSLPSIKWVLDLAKAAVLRHGVRGLVI 586

Query: 631  DPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDI 452
            DPYNELDHQRP +QTETEYVSQMLT +KRFAQHHACHVWFVAHPRQL +WVG PPNLYDI
Sbjct: 587  DPYNELDHQRPVSQTETEYVSQMLTMVKRFAQHHACHVWFVAHPRQLHNWVGEPPNLYDI 646

Query: 451  SGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFV 272
            SGSAHFINKCDNGIV+HRNRD  AGP+DRVQ+C+RKVRNKV+G IG+AFLSYNR TGE++
Sbjct: 647  SGSAHFINKCDNGIVIHRNRDPEAGPIDRVQVCVRKVRNKVVGTIGEAFLSYNRVTGEYM 706

Query: 271  DI 266
            DI
Sbjct: 707  DI 708