BLASTX nr result

ID: Cinnamomum25_contig00007929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00007929
         (1002 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo n...   274   8e-71
ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isofo...   269   3e-69
ref|XP_006846043.1| PREDICTED: THO complex subunit 4A isoform X1...   268   6e-69
ref|XP_011624054.1| PREDICTED: THO complex subunit 4A isoform X2...   265   3e-68
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin...   259   3e-66
ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]...   254   5e-65
ref|XP_010907063.1| PREDICTED: THO complex subunit 4A-like [Elae...   250   1e-63
ref|XP_002531375.1| RNA and export factor binding protein, putat...   248   5e-63
ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha ...   246   2e-62
ref|XP_010922376.1| PREDICTED: THO complex subunit 4A-like [Elae...   243   1e-61
ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptu...   242   3e-61
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr...   242   3e-61
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss...   241   5e-61
ref|XP_010253244.1| PREDICTED: THO complex subunit 4A-like isofo...   241   5e-61
ref|XP_008776568.1| PREDICTED: THO complex subunit 4A-like [Phoe...   241   5e-61
ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]...   241   8e-61
ref|XP_010092777.1| RNA and export factor-binding protein 2 [Mor...   240   1e-60
gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]             239   2e-60
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor...   239   2e-60
ref|XP_004149042.2| PREDICTED: THO complex subunit 4A [Cucumis s...   238   4e-60

>ref|XP_010260105.1| PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
          Length = 244

 Score =  274 bits (700), Expect = 8e-71
 Identities = 149/252 (59%), Positives = 166/252 (65%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSALDM+LEDLI                        +RRF NRG+NR  PYS GKP+QA
Sbjct: 1   MSSALDMTLEDLIKNNKKSGGGNFRGRGRGSGPGP--SRRFPNRGANRTAPYSTGKPVQA 58

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           P++ WQHD+F DQ              IETGTKLYISNL+YGVSNEDIKELFSEVGDLKR
Sbjct: 59  PDSAWQHDMFTDQAAAYPAQAARTSA-IETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 117

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y++HYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIE+VGTN+ TP ++P  
Sbjct: 118 YTVHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEVVGTNIATPVAVPPA 177

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG FGNP+ VPRS Q                                GE +SAEDLDAD
Sbjct: 178 ANGGFGNPNGVPRSGQ-----GRGGAMGRSRGGGGRGFGRGRGRRRDRGEQISAEDLDAD 232

Query: 114 LEKYHSEAMQIN 79
           LEKYHSEAMQIN
Sbjct: 233 LEKYHSEAMQIN 244


>ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo
           nucifera]
          Length = 241

 Score =  269 bits (687), Expect = 3e-69
 Identities = 149/252 (59%), Positives = 163/252 (64%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSS+LDMSL+DLI                         RR  NRG+NR TPYSMGK +QA
Sbjct: 1   MSSSLDMSLDDLIKNNKKSGGSNFRGRGRGSGPGP--ARRAPNRGANRTTPYSMGKSVQA 58

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           P++ WQHD+F DQ              IETGTKLYISNLDYGVSN+DIKELFSEVGDLKR
Sbjct: 59  PDSAWQHDMFTDQAAAYPAQASRASA-IETGTKLYISNLDYGVSNDDIKELFSEVGDLKR 117

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y+IHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVGTNV TP   P  
Sbjct: 118 YTIHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNVTTPAVAPAA 177

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG FGNP++VPRS Q                                 E ++AEDLDAD
Sbjct: 178 TNGKFGNPNSVPRSGQ--------GRGGAIGRPRGRGFGRGRGRGRGRAEQITAEDLDAD 229

Query: 114 LEKYHSEAMQIN 79
           LEKYHSEAMQIN
Sbjct: 230 LEKYHSEAMQIN 241


>ref|XP_006846043.1| PREDICTED: THO complex subunit 4A isoform X1 [Amborella trichopoda]
           gi|769809515|ref|XP_011624053.1| PREDICTED: THO complex
           subunit 4A isoform X1 [Amborella trichopoda]
           gi|548848813|gb|ERN07718.1| hypothetical protein
           AMTR_s00012p00035940 [Amborella trichopoda]
          Length = 253

 Score =  268 bits (684), Expect = 6e-69
 Identities = 156/255 (61%), Positives = 163/255 (63%), Gaps = 3/255 (1%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXP--TRRFQNRGSNRPTPYSMGKPI 661
           MSSALDMSL+DLI                           RR QNR +NR  PYSMGK  
Sbjct: 1   MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAF 60

Query: 660 QA-PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGD 484
           QA PET WQHDLFAD VG            IETGTKLYISNLDYGVSNEDIKELFSEVGD
Sbjct: 61  QAAPETTWQHDLFADPVGPYGVQAARPSA-IETGTKLYISNLDYGVSNEDIKELFSEVGD 119

Query: 483 LKRYSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSM 304
           LKRYSIHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVGTN+VTP  +
Sbjct: 120 LKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPI 179

Query: 303 PQVSNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDL 124
           PQV+NG    P+ +PRS Q                                GE VSA DL
Sbjct: 180 PQVANGLLATPNGIPRSVQ-PRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADL 238

Query: 123 DADLEKYHSEAMQIN 79
           DADLEKYHSEAMQIN
Sbjct: 239 DADLEKYHSEAMQIN 253


>ref|XP_011624054.1| PREDICTED: THO complex subunit 4A isoform X2 [Amborella trichopoda]
          Length = 250

 Score =  265 bits (678), Expect = 3e-68
 Identities = 155/254 (61%), Positives = 162/254 (63%), Gaps = 2/254 (0%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXP--TRRFQNRGSNRPTPYSMGKPI 661
           MSSALDMSL+DLI                           RR QNR +NR  PYSMGK  
Sbjct: 1   MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKA- 59

Query: 660 QAPETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDL 481
            APET WQHDLFAD VG            IETGTKLYISNLDYGVSNEDIKELFSEVGDL
Sbjct: 60  -APETTWQHDLFADPVGPYGVQAARPSA-IETGTKLYISNLDYGVSNEDIKELFSEVGDL 117

Query: 480 KRYSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMP 301
           KRYSIHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVGTN+VTP  +P
Sbjct: 118 KRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPIP 177

Query: 300 QVSNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLD 121
           QV+NG    P+ +PRS Q                                GE VSA DLD
Sbjct: 178 QVANGLLATPNGIPRSVQ-PRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADLD 236

Query: 120 ADLEKYHSEAMQIN 79
           ADLEKYHSEAMQIN
Sbjct: 237 ADLEKYHSEAMQIN 250


>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  259 bits (661), Expect = 3e-66
 Identities = 151/252 (59%), Positives = 161/252 (63%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MS+ALDMSL+DLI                         RR  NRG+NR TPYS+ K   A
Sbjct: 1   MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGP-ARRLPNRGANRITPYSVSK---A 56

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD+FADQ              IETGTKLYISNLDYGVSNEDIKELFSEVGDLKR
Sbjct: 57  PETTWQHDMFADQAAAYPAQAGRTSA-IETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YSIHYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKPMKIEIVGTN+ TP ++P V
Sbjct: 116 YSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPV 175

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG FGN +   RSAQ                                GE VSAEDLDAD
Sbjct: 176 TNGTFGNSNGGLRSAQ----GRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDAD 231

Query: 114 LEKYHSEAMQIN 79
           LEKYHSEAMQIN
Sbjct: 232 LEKYHSEAMQIN 243


>ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]
           gi|508715675|gb|EOY07572.1| RNA-binding family protein
           [Theobroma cacao]
          Length = 240

 Score =  254 bits (650), Expect = 5e-65
 Identities = 143/250 (57%), Positives = 158/250 (63%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           M++ LDMSL+DLI                        +RRF NR +NR  PYS  KP+QA
Sbjct: 1   MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGNGP---SRRFPNRAANRTAPYS--KPVQA 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           P+T WQHD+F D  G           +IETGTKLYISNLDYGVSNEDIKELFSEVGD+KR
Sbjct: 56  PDTTWQHDMFVDD-GAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKR 114

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YS+HYDRSGRSKGTAEVVFSRR DAA AFKRYN VQLDGKPMKIEIVGTNV TP ++P  
Sbjct: 115 YSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPA 174

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG F NP+ VPRS Q                                GE VSAEDLDAD
Sbjct: 175 TNGKFANPNGVPRSGQ------GRGSFSGRSRGPGRGARRGRGQGRGQGEKVSAEDLDAD 228

Query: 114 LEKYHSEAMQ 85
           LE YH EAMQ
Sbjct: 229 LENYHKEAMQ 238


>ref|XP_010907063.1| PREDICTED: THO complex subunit 4A-like [Elaeis guineensis]
          Length = 241

 Score =  250 bits (639), Expect = 1e-63
 Identities = 143/252 (56%), Positives = 161/252 (63%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           M+S+LDMSL+DLI                        TRRF NR  NRP PYSMGK   A
Sbjct: 1   MTSSLDMSLDDLIKNNKKSTAASGGRGRGRGSGGP--TRRFPNRSGNRPGPYSMGK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           P++ W HD++A+Q G            IETGTKLYISNLDYGVSNEDIKELFSEVGDLKR
Sbjct: 56  PDSAWPHDMYANQTGGYSAPAARVSS-IETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 114

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YSIHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVG N+ TP + PQ+
Sbjct: 115 YSIHYDRSGRSKGTAEVVFSRRADALAAIKRYNNVQLDGKPMKIEIVGMNIETPAAAPQI 174

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
            NGAFG+ +  P+SA                                 G+ ++A DLDAD
Sbjct: 175 INGAFGSLNGPPKSA-----PGRGGSTGWPRGGGGRGRARGRGRGRGRGDQIAAADLDAD 229

Query: 114 LEKYHSEAMQIN 79
           LEKYH+EAMQIN
Sbjct: 230 LEKYHAEAMQIN 241


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  248 bits (633), Expect = 5e-63
 Identities = 146/256 (57%), Positives = 158/256 (61%), Gaps = 4/256 (1%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSALDMSL+D+I                        TRRF NRG+NR  PY+  K   A
Sbjct: 1   MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGP--TRRFNNRGTNRAAPYAAAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXA----IETGTKLYISNLDYGVSNEDIKELFSEVG 487
           PE+ WQHD+F DQ G           +    IETGTKLYISNL+YGVSNEDIKELFSEVG
Sbjct: 56  PESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVG 115

Query: 486 DLKRYSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTS 307
           DLKRYSIHYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKPMKIEIVGTN+ TP +
Sbjct: 116 DLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA 175

Query: 306 MPQVSNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAED 127
            P  +NG FGN +  PR  Q                                GE VSAED
Sbjct: 176 TP-AANGNFGNSNGAPRGGQ---GRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAED 231

Query: 126 LDADLEKYHSEAMQIN 79
           LDADLEKYHSEAMQ N
Sbjct: 232 LDADLEKYHSEAMQTN 247


>ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha curcas]
           gi|643738220|gb|KDP44208.1| hypothetical protein
           JCGZ_05675 [Jatropha curcas]
          Length = 248

 Score =  246 bits (628), Expect = 2e-62
 Identities = 147/255 (57%), Positives = 158/255 (61%), Gaps = 3/255 (1%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSALDMSL+D+I                        TRRF NR +NR  PYS  K   A
Sbjct: 1   MSSALDMSLDDIIKSNKKPGSGNSRGRGRASGPGP--TRRFTNRVANRAAPYSTAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD+F DQ G           AIETGTKLYISNL+YGVSNEDIKELFSEVGDLKR
Sbjct: 56  PETTWQHDMFTDQ-GMGYAGQGGRASAIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 114

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y+IHYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKPMKIEIVGTN+ TP + P  
Sbjct: 115 YTIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA-PSA 173

Query: 294 SNGAFGNPSAVPRSAQ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDL 124
           +NG FG+ +AV R  Q                                   GE VSAEDL
Sbjct: 174 ANGTFGSSNAVSRGGQGRGGAVGRQRGGSGGGRGFGRGRGRGRGGGGGGGRGEKVSAEDL 233

Query: 123 DADLEKYHSEAMQIN 79
           DADLEKYHSEAMQ N
Sbjct: 234 DADLEKYHSEAMQTN 248


>ref|XP_010922376.1| PREDICTED: THO complex subunit 4A-like [Elaeis guineensis]
          Length = 245

 Score =  243 bits (621), Expect = 1e-61
 Identities = 138/254 (54%), Positives = 158/254 (62%), Gaps = 2/254 (0%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXP--TRRFQNRGSNRPTPYSMGKPI 661
           M+S+LDMSL+DLI                           RRF NR  NRPTPYSM K  
Sbjct: 1   MTSSLDMSLDDLIKKNKKPATGGSSSSSGRGRGRGSGGPARRFPNRSGNRPTPYSMAK-- 58

Query: 660 QAPETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDL 481
            AP++ WQHD++A+Q G            IETGTKLYISNLDYGVS EDIKELFSEVGDL
Sbjct: 59  -APDSAWQHDMYANQTGGYSAPAARVSA-IETGTKLYISNLDYGVSTEDIKELFSEVGDL 116

Query: 480 KRYSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMP 301
           KRY+IHYDRSGRSKGTAEV FSRR DA AA KRYNNVQLDGKPMKIEIVGTN+ TP ++P
Sbjct: 117 KRYAIHYDRSGRSKGTAEVFFSRRVDALAAVKRYNNVQLDGKPMKIEIVGTNIETPATVP 176

Query: 300 QVSNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLD 121
           Q+SNG FG+ +  P+S                                  G  +++ DLD
Sbjct: 177 QISNGTFGSINGAPKSG-----AGSGGSTGWPRGGGGRRRARGRGRGRGRGSQMTSADLD 231

Query: 120 ADLEKYHSEAMQIN 79
           ADLEKYH+EAMQIN
Sbjct: 232 ADLEKYHAEAMQIN 245


>ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptus grandis]
           gi|629121108|gb|KCW85598.1| hypothetical protein
           EUGRSUZ_B02389 [Eucalyptus grandis]
           gi|629121109|gb|KCW85599.1| hypothetical protein
           EUGRSUZ_B02389 [Eucalyptus grandis]
           gi|629121110|gb|KCW85600.1| hypothetical protein
           EUGRSUZ_B02389 [Eucalyptus grandis]
          Length = 252

 Score =  242 bits (617), Expect = 3e-61
 Identities = 142/256 (55%), Positives = 156/256 (60%), Gaps = 6/256 (2%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXP------TRRFQNRGSNRPTPYSM 673
           MSSALDMSL+D+I                              TRR  NR + R  PY+ 
Sbjct: 1   MSSALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTRRPPNRAAARANPYAA 60

Query: 672 GKPIQAPETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSE 493
            K   APET WQHD+FADQ G           AIETGTKLYISNLDYGVSNEDIKELFSE
Sbjct: 61  PK---APETTWQHDMFADQ-GLTFQGQPGRASAIETGTKLYISNLDYGVSNEDIKELFSE 116

Query: 492 VGDLKRYSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTP 313
           VGDLKR+++HYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKPMKIEIVGTN+ TP
Sbjct: 117 VGDLKRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATP 176

Query: 312 TSMPQVSNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSA 133
            + P +SNG+FGN +  PR  Q                                 E VSA
Sbjct: 177 AATPVISNGSFGNLNGFPRGGQ-ARGGAIGRPRGGASGSGRRPAARGRGRGRGRSEKVSA 235

Query: 132 EDLDADLEKYHSEAMQ 85
           EDLDADLEKYHSEAM+
Sbjct: 236 EDLDADLEKYHSEAME 251


>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
           gi|567864256|ref|XP_006424777.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|567864258|ref|XP_006424778.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|567864260|ref|XP_006424779.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526710|gb|ESR38016.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526711|gb|ESR38017.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526712|gb|ESR38018.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
           gi|557526713|gb|ESR38019.1| hypothetical protein
           CICLE_v10029160mg [Citrus clementina]
          Length = 247

 Score =  242 bits (617), Expect = 3e-61
 Identities = 141/250 (56%), Positives = 155/250 (62%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSALDMSL+D+I                         RR  NRG+NR  PY+  K   A
Sbjct: 1   MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGP--ARRIPNRGANRVAPYTTAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD+FADQV            AIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR
Sbjct: 56  PETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YSIHYDRSGRSKGTAEVV+SRRADA AA KRYNNVQLDGKPMKIEIVGTN+ T T+ P  
Sbjct: 116 YSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAP-A 174

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +N  FGN + VPR  Q                                 E +SAEDLDAD
Sbjct: 175 ANVNFGNSNGVPRGGQ--GRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDAD 232

Query: 114 LEKYHSEAMQ 85
           L+KY+SEA +
Sbjct: 233 LDKYYSEASE 242


>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
           gi|763741358|gb|KJB08857.1| hypothetical protein
           B456_001G108500 [Gossypium raimondii]
           gi|763741359|gb|KJB08858.1| hypothetical protein
           B456_001G108500 [Gossypium raimondii]
           gi|763741360|gb|KJB08859.1| hypothetical protein
           B456_001G108500 [Gossypium raimondii]
           gi|763741362|gb|KJB08861.1| hypothetical protein
           B456_001G108500 [Gossypium raimondii]
           gi|763741363|gb|KJB08862.1| hypothetical protein
           B456_001G108500 [Gossypium raimondii]
          Length = 241

 Score =  241 bits (616), Expect = 5e-61
 Identities = 142/252 (56%), Positives = 157/252 (62%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSAL+MSL+DLI                         RR  NR +NR  PY+  K   A
Sbjct: 1   MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGP--ARRIPNRRANRSAPYTAAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET+WQHD+++D+ G           AIETGTKLYISNLDYGVSN+DIKELFSEVGDLKR
Sbjct: 56  PETMWQHDMYSDK-GSALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKR 114

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y IHYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKPMKIEIVGTN+ TPT+ P  
Sbjct: 115 YGIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNIATPTA-PSA 173

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG FG+ +  PR  Q                                GE VSAEDLDAD
Sbjct: 174 ANGTFGSSNGAPRGGQ----GRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDLDAD 229

Query: 114 LEKYHSEAMQIN 79
           LEKYHSEAMQ N
Sbjct: 230 LEKYHSEAMQTN 241


>ref|XP_010253244.1| PREDICTED: THO complex subunit 4A-like isoform X2 [Nelumbo
           nucifera]
          Length = 224

 Score =  241 bits (616), Expect = 5e-61
 Identities = 127/193 (65%), Positives = 139/193 (72%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSS+LDMSL+DLI                         RR  NRG+NR TPYSMGK +QA
Sbjct: 1   MSSSLDMSLDDLIKNNKKSGGSNFRGRGRGSGPGP--ARRAPNRGANRTTPYSMGKSVQA 58

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           P++ WQHD+F DQ              IETGTKLYISNLDYGVSN+DIKELFSEVGDLKR
Sbjct: 59  PDSAWQHDMFTDQAAAYPAQASRASA-IETGTKLYISNLDYGVSNDDIKELFSEVGDLKR 117

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y+IHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVGTNV TP   P  
Sbjct: 118 YTIHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNVTTPAVAPAA 177

Query: 294 SNGAFGNPSAVPR 256
           +NG FGNP++VPR
Sbjct: 178 TNGKFGNPNSVPR 190


>ref|XP_008776568.1| PREDICTED: THO complex subunit 4A-like [Phoenix dactylifera]
          Length = 242

 Score =  241 bits (616), Expect = 5e-61
 Identities = 139/252 (55%), Positives = 161/252 (63%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           M+S+LDMSL+DLI                         RR  NR  NR  PYSMGK   A
Sbjct: 1   MASSLDMSLDDLIKNNKKSASAASGGRGRGRGTGGA-ARRVPNRAGNRLGPYSMGK---A 56

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           P++ WQHD++A+Q             AIETGTKLYISNLD+GVSNED+KELF+EVGDLKR
Sbjct: 57  PDSAWQHDMYANQT-EGSLPPAVRVSAIETGTKLYISNLDFGVSNEDVKELFAEVGDLKR 115

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YSIHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVGTN+ TP ++PQ+
Sbjct: 116 YSIHYDRSGRSKGTAEVVFSRRADAVAAIKRYNNVQLDGKPMKIEIVGTNIATPAAVPQI 175

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NGAF + +  P+SA                                 G+ +SA DLDAD
Sbjct: 176 TNGAFRSLNGPPKSA-----PGRGGSTGWPRGGGGRGRARGRGRGRGRGDQLSASDLDAD 230

Query: 114 LEKYHSEAMQIN 79
           LEKYH+EAMQIN
Sbjct: 231 LEKYHAEAMQIN 242


>ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]
           gi|508786853|gb|EOY34109.1| RNA-binding family protein
           [Theobroma cacao]
          Length = 241

 Score =  241 bits (614), Expect = 8e-61
 Identities = 142/252 (56%), Positives = 156/252 (61%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSAL+MSL+DLI                         RRF NRG+NR  PY+  K   A
Sbjct: 1   MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGP--ARRFPNRGANRSGPYTAAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD+++D+ G           AIETGTKLYISNLDYGVSN+DIKELF+EVGDLKR
Sbjct: 56  PETTWQHDMYSDK-GAAFQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKR 114

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           ++IHYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKPMKIEIVGTNV TP   P  
Sbjct: 115 FTIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATP-GAPSA 173

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
            NGAFGN +  PR                                   GE VSAEDLDA+
Sbjct: 174 GNGAFGNSNGAPRGGH----GRGGGFGKQRGGGGGRGFGRGRGRGKGRGEKVSAEDLDAE 229

Query: 114 LEKYHSEAMQIN 79
           LEKYHSEAMQ N
Sbjct: 230 LEKYHSEAMQTN 241


>ref|XP_010092777.1| RNA and export factor-binding protein 2 [Morus notabilis]
           gi|587862438|gb|EXB52242.1| RNA and export
           factor-binding protein 2 [Morus notabilis]
          Length = 248

 Score =  240 bits (613), Expect = 1e-60
 Identities = 137/252 (54%), Positives = 154/252 (61%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MS  L MSL+D+I                         RR  NR  NR  PY+     +A
Sbjct: 1   MSDPLSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGP-ARRVPNRAPNRAAPYAAAP--KA 57

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD++ DQ G           AI+TGTKLYISNL+YGVSNEDIKELFSEVGDLKR
Sbjct: 58  PETTWQHDMYMDQ-GTAFAAQAGRASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKR 116

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y+IHYDRSGRSKGTAEVVFSRRADA AA KRYNNVQLDGKPMKIEIVGTNV TP + P  
Sbjct: 117 YAIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPP 176

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG+FGN + +PR  Q                                GE +SA+DLDAD
Sbjct: 177 ANGSFGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRGTGEKISADDLDAD 236

Query: 114 LEKYHSEAMQIN 79
           LEKYH+EAMQ N
Sbjct: 237 LEKYHAEAMQEN 248


>gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]
          Length = 241

 Score =  239 bits (611), Expect = 2e-60
 Identities = 141/252 (55%), Positives = 156/252 (61%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSAL+MSL+DLI                         RR  NR +NR  PY+  K   A
Sbjct: 1   MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGP--ARRIPNRRANRSAPYTAAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD+++D+ G           AIETGTKLYISNLDYGVSN+DIKELFSEVGDLKR
Sbjct: 56  PETTWQHDMYSDK-GAALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKR 114

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           Y IHYDRSGRSKGTAEVVFSRR DA AA KRYNNVQLDGKP+KIEIVGTN+ TPT+ P  
Sbjct: 115 YGIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPIKIEIVGTNIATPTA-PSA 173

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +NG FG+ +  PR  Q                                GE VSAEDLDAD
Sbjct: 174 ANGTFGSSNGAPRGGQ----GRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDLDAD 229

Query: 114 LEKYHSEAMQIN 79
           LEKYHSEAMQ N
Sbjct: 230 LEKYHSEAMQTN 241


>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
          Length = 247

 Score =  239 bits (611), Expect = 2e-60
 Identities = 140/250 (56%), Positives = 154/250 (61%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           MSSALDMSL+D+I                         RR  NRG+NR  PY+  K   A
Sbjct: 1   MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGP--ARRIPNRGANRVAPYTTAK---A 55

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET WQHD+FADQV            AIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR
Sbjct: 56  PETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YSIHYDRSGRSKGTAEVV+SRRADA AA KRYN VQLDGKPMKIEIVGTN+ T T+ P  
Sbjct: 116 YSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAAP-A 174

Query: 294 SNGAFGNPSAVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAEDLDAD 115
           +N  FGN + VPR  Q                                 E +SAEDLDAD
Sbjct: 175 ANVNFGNSNGVPRGGQ--GRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDAD 232

Query: 114 LEKYHSEAMQ 85
           L+KY+SEA +
Sbjct: 233 LDKYYSEASE 242


>ref|XP_004149042.2| PREDICTED: THO complex subunit 4A [Cucumis sativus]
           gi|700210569|gb|KGN65665.1| hypothetical protein
           Csa_1G480690 [Cucumis sativus]
          Length = 250

 Score =  238 bits (608), Expect = 4e-60
 Identities = 138/256 (53%), Positives = 159/256 (62%), Gaps = 4/256 (1%)
 Frame = -1

Query: 834 MSSALDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXPTRRFQNRGSNRPTPYSMGKPIQA 655
           M+  LDMSL+D+I                        +RRF+NRG NR TPYS  K   A
Sbjct: 1   MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSGPGP-SRRFRNRGLNRATPYSTSK---A 56

Query: 654 PETVWQHDLFADQVGXXXXXXXXXXXAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 475
           PET W HD+F D  G           AIETGTKLY+SNLDYGVSNEDIKELFSEVGD+KR
Sbjct: 57  PETAWSHDMFVDH-GAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKR 115

Query: 474 YSIHYDRSGRSKGTAEVVFSRRADAAAAFKRYNNVQLDGKPMKIEIVGTNVVTPTSMPQV 295
           YSI+YD+SGRSKGTAE+VFSR+ADA AA KRYNNVQLDGKPMK+EIVGTN+VTP ++P  
Sbjct: 116 YSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTP-AVPAP 174

Query: 294 SNGAFGNPSAVPRS----AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENVSAED 127
           SN +FGNP+  PR      +                                GE +SAED
Sbjct: 175 SNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGSGRGHGEKLSAED 234

Query: 126 LDADLEKYHSEAMQIN 79
           LDADL+KYH EAMQIN
Sbjct: 235 LDADLDKYHEEAMQIN 250


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