BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00007693
         (344 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010257605.1| PREDICTED: splicing factor 3B subunit 3 [Nel...    58   2e-06
ref|XP_007029118.1| Cleavage and polyadenylation specificity fac...    57   4e-06
ref|XP_007029116.1| Cleavage and polyadenylation specificity fac...    57   4e-06
ref|XP_008443005.1| PREDICTED: pre-mRNA-splicing factor RSE1 iso...    57   6e-06
ref|XP_004136549.1| PREDICTED: splicing factor 3B subunit 3 [Cuc...    57   6e-06

>ref|XP_010257605.1| PREDICTED: splicing factor 3B subunit 3 [Nelumbo nucifera]
          Length = 1396

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 3/46 (6%)
 Frame = -2

Query: 130 IDEE-PRAQSQPD--GIHYLAKCVLRGSVVLQVVYGHIRSPCSLDI 2
           +DE+ P +QS+P+  G+HYLAKCVLRGS VLQ V+GH RS  S D+
Sbjct: 4   VDEDLPSSQSRPEPKGVHYLAKCVLRGSAVLQAVHGHFRSSSSFDV 49


>ref|XP_007029118.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein isoform 3 [Theobroma cacao]
           gi|508717723|gb|EOY09620.1| Cleavage and polyadenylation
           specificity factor (CPSF) A subunit protein isoform 3
           [Theobroma cacao]
          Length = 1254

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 112 AQSQPDGIHYLAKCVLRGSVVLQVVYGHIRSPCSLDI 2
           A +   G++YLAKCVLRGSVVLQV YGH+RSP S D+
Sbjct: 23  ATASSQGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDV 59


>ref|XP_007029116.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein isoform 1 [Theobroma cacao]
           gi|508717721|gb|EOY09618.1| Cleavage and polyadenylation
           specificity factor (CPSF) A subunit protein isoform 1
           [Theobroma cacao]
          Length = 1391

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 112 AQSQPDGIHYLAKCVLRGSVVLQVVYGHIRSPCSLDI 2
           A +   G++YLAKCVLRGSVVLQV YGH+RSP S D+
Sbjct: 23  ATASSQGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDV 59


>ref|XP_008443005.1| PREDICTED: pre-mRNA-splicing factor RSE1 isoform X1 [Cucumis melo]
          Length = 1376

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -2

Query: 112 AQSQPDGIHYLAKCVLRGSVVLQVVYGHIRSPCSLDI 2
           + S     +YLAKCVLRGSVVLQV+YGHIRSP SLD+
Sbjct: 16  SSSTSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDV 52


>ref|XP_004136549.1| PREDICTED: splicing factor 3B subunit 3 [Cucumis sativus]
           gi|700204131|gb|KGN59264.1| hypothetical protein
           Csa_3G792040 [Cucumis sativus]
          Length = 1376

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -2

Query: 112 AQSQPDGIHYLAKCVLRGSVVLQVVYGHIRSPCSLDI 2
           + S     +YLAKCVLRGSVVLQV+YGHIRSP SLD+
Sbjct: 16  SSSTSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDV 52