BLASTX nr result
ID: Cinnamomum25_contig00006874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00006874
(1227 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 196 4e-47
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 196 4e-47
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 183 3e-43
ref|XP_006852230.1| PREDICTED: cleavage and polyadenylation spec... 181 8e-43
ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation spec... 179 4e-42
ref|XP_010929959.1| PREDICTED: cleavage and polyadenylation spec... 177 1e-41
ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation spec... 177 1e-41
gb|KHG22501.1| Cleavage and polyadenylation specificity factor s... 177 1e-41
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 177 2e-41
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec... 176 2e-41
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 176 2e-41
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 176 4e-41
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 175 7e-41
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 175 7e-41
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 174 9e-41
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 174 1e-40
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec... 174 2e-40
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 172 4e-40
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 171 1e-39
ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation spec... 170 2e-39
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185 isoform
X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 196 bits (497), Expect = 4e-47
Identities = 112/218 (51%), Positives = 126/218 (57%), Gaps = 3/218 (1%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +NT+ L GVAPHVNPAFF
Sbjct: 436 TYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATG 495
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHER-GRSNV-S 872
GH++GMW DTSM GWGG +EHGRRTRESSYGGDD SDYGYGE HE+ GRSN S
Sbjct: 496 MDGHHAGMWTDTSMGGWGG---EEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTAS 552
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR-YREEKDGHRDHXXXXXXXXXXXXXX 695
REK+RGSE YREEKDG+RDH
Sbjct: 553 REKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWD 612
Query: 694 RGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSRS+SR + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 613 RGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 650
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Vitis vinifera]
Length = 656
Score = 196 bits (497), Expect = 4e-47
Identities = 112/218 (51%), Positives = 126/218 (57%), Gaps = 3/218 (1%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +NT+ L GVAPHVNPAFF
Sbjct: 442 TYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATG 501
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHER-GRSNV-S 872
GH++GMW DTSM GWGG +EHGRRTRESSYGGDD SDYGYGE HE+ GRSN S
Sbjct: 502 MDGHHAGMWTDTSMGGWGG---EEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTAS 558
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR-YREEKDGHRDHXXXXXXXXXXXXXX 695
REK+RGSE YREEKDG+RDH
Sbjct: 559 REKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWD 618
Query: 694 RGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSRS+SR + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 619 RGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 656
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 183 bits (464), Expect = 3e-43
Identities = 108/222 (48%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+ SFP +NT+ L GVAPHVNPAFF
Sbjct: 412 TYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSG 471
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERG-RSNV-S 872
GH++GMW D SM GWGG DEHGRRTRESSYGGDD S+YGYGE HE+G RSN S
Sbjct: 472 MDGHHAGMWNDPSMGGWGG---DEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPS 528
Query: 871 REKDRGSE-----HXXXXXXXXXXXXXXXXXXXXXXXXRYREEKDGHRDHXXXXXXXXXX 707
RE++RGSE + RY+EEKD +RDH
Sbjct: 529 RERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYE 588
Query: 706 XXXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SR RS+S+ + EDDHRSRSRD DYGKRRRLPSE
Sbjct: 589 DDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630
>ref|XP_006852230.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Amborella trichopoda] gi|548855834|gb|ERN13697.1|
hypothetical protein AMTR_s00049p00146760 [Amborella
trichopoda]
Length = 659
Score = 181 bits (460), Expect = 8e-43
Identities = 102/198 (51%), Positives = 117/198 (59%), Gaps = 2/198 (1%)
Frame = -3
Query: 1168 MMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHNSGMWADTSMAGWGG 989
M+PSF M TV LPGVAPHVNPAFF GH+ GMW D+SM G G
Sbjct: 465 MLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGAMDGHHGGMWGDSSMGGGVG 524
Query: 988 SAGDEHGRRTRESSYGGDDVTSDYGYGETGHERG--RSNVSREKDRGSEHXXXXXXXXXX 815
+EHGRRTRESSYG DD SDYGYG+ GHERG RSN REKDRGSE
Sbjct: 525 WGNEEHGRRTRESSYG-DDGASDYGYGDGGHERGGGRSNPGREKDRGSERDWSSGPERRH 583
Query: 814 XXXXXXXXXXXXXXRYREEKDGHRDHXXXXXXXXXXXXXXRGQSASRSRSKSRMIQEDDH 635
Y++EKDG+ DH RG+++SRSRSKSRM+QE+D
Sbjct: 584 RDDRDSDWDRDPR--YKDEKDGYSDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQ 641
Query: 634 RSRSRDADYGKRRRLPSE 581
RSRS+D DYGKRRR+PSE
Sbjct: 642 RSRSKDVDYGKRRRVPSE 659
>ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Phoenix dactylifera]
Length = 630
Score = 179 bits (454), Expect = 4e-42
Identities = 101/216 (46%), Positives = 119/216 (55%), Gaps = 1/216 (0%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GMMP F +++V LPGVAPHVNPAFF
Sbjct: 418 TYMGGGGPYGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFFGRGMSGNAMGMMGGNG 477
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHER-GRSNVSR 869
GH++GMW D + GW G++HGRRTRESSYGGDDV +DYGYGE +ER RSN SR
Sbjct: 478 MEGHSAGMWTDMGIGGW---TGEDHGRRTRESSYGGDDVAADYGYGEVNNERVERSNASR 534
Query: 868 EKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXRYREEKDGHRDHXXXXXXXXXXXXXXRG 689
EK+RGSE RYREEKD + DH G
Sbjct: 535 EKERGSERDWSGSSERRYRDEREKERDRSDKERYREEKDRYMDHRQRDRDWDNEGDWDGG 594
Query: 688 QSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
S+SRSR+KSR +QE+ +RS SRDADYGKRRRLPS+
Sbjct: 595 HSSSRSRNKSRTVQEEYYRSHSRDADYGKRRRLPSD 630
>ref|XP_010929959.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Elaeis guineensis]
Length = 630
Score = 177 bits (450), Expect = 1e-41
Identities = 101/216 (46%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GMMP F +++V LPGVAPHVNPAFF
Sbjct: 418 TYMGGGGPFGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFFGRGMSGNAMGMMGSNG 477
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHER-GRSNVSR 869
GH+ GMW DT MAGW G++HGRRT ESSYGGDDV +DYGYGE +E+ GRSN SR
Sbjct: 478 MEGHSVGMWTDTGMAGW---TGEDHGRRTGESSYGGDDVAADYGYGEVNNEKVGRSNASR 534
Query: 868 EKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXRYREEKDGHRDHXXXXXXXXXXXXXXRG 689
EK+RGSE RYREEKD +RD G
Sbjct: 535 EKERGSERDWSGSSERRYRDEREKERDRSDRERYREEKDRYRDQRQRDRDWDNESDWDGG 594
Query: 688 QSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
S+SRSR+KSRM+ E+ +RS SRD DYGKRRRL S+
Sbjct: 595 HSSSRSRNKSRMVPEEHYRSHSRDPDYGKRRRLSSD 630
>ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium raimondii]
gi|823252908|ref|XP_012459071.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
[Gossypium raimondii] gi|763811133|gb|KJB78035.1|
hypothetical protein B456_012G173800 [Gossypium
raimondii]
Length = 648
Score = 177 bits (449), Expect = 1e-41
Identities = 101/220 (45%), Positives = 121/220 (55%), Gaps = 5/220 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +NT+ L GVAPHVNPAFF
Sbjct: 432 TYMGRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGLGMMGVAG 491
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSN-VSR 869
G +SGMW DT+M GWGG DEH RRTRESSYGG+D S+YGYG+ HE+GRS+ +R
Sbjct: 492 MDGPHSGMWTDTNMGGWGG---DEHDRRTRESSYGGEDGASEYGYGDANHEKGRSSGATR 548
Query: 868 EKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXXX 701
EKDR SE YREEKD +R+H
Sbjct: 549 EKDRASEREWSGNSERRHHDEKERESDRPEREHREHRYREEKDSYREHRHRGRDVDYDDD 608
Query: 700 XXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSR++S +E++HRSRSRD DYGK+RRLPSE
Sbjct: 609 WDRGQSSSRSRNRSHATREEEHRSRSRDVDYGKKRRLPSE 648
>gb|KHG22501.1| Cleavage and polyadenylation specificity factor subunit [Gossypium
arboreum]
Length = 648
Score = 177 bits (449), Expect = 1e-41
Identities = 101/220 (45%), Positives = 121/220 (55%), Gaps = 5/220 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +NT+ L GVAPHVNPAFF
Sbjct: 432 TYMGRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGLGMMGVAG 491
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSN-VSR 869
G +SGMW DT+M GWGG DEH RRTRESSYGG+D S+YGYG+ HE+GRS+ +R
Sbjct: 492 MDGPHSGMWTDTNMGGWGG---DEHDRRTRESSYGGEDGASEYGYGDANHEKGRSSGATR 548
Query: 868 EKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXXX 701
EKDR SE YREEKD +R+H
Sbjct: 549 EKDRASEREWSGNSERRHHDEKERESDRPEREHREHRYREEKDSYREHRHRGRDLDYDDD 608
Query: 700 XXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSR++S +E++HRSRSRD DYGK+RRLPSE
Sbjct: 609 WDRGQSSSRSRNRSHATREEEHRSRSRDVDYGKKRRLPSE 648
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 177 bits (448), Expect = 2e-41
Identities = 100/199 (50%), Positives = 115/199 (57%), Gaps = 3/199 (1%)
Frame = -3
Query: 1168 MMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHNSGMWADTSMAGWGG 989
MMP F +N + LPGVAPHVNPAFF G + GMW DTS GWGG
Sbjct: 453 MMPPFQAVNPMGLPGVAPHVNPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGG 512
Query: 988 SAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGR--SNVSREKDRGSEHXXXXXXXXXX 815
+EHGRRTRESSYGG+D S+YGYGE H++G S VSREK+RGSE
Sbjct: 513 ---EEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRH 569
Query: 814 XXXXXXXXXXXXXXR-YREEKDGHRDHXXXXXXXXXXXXXXRGQSASRSRSKSRMIQEDD 638
YREE+DG+RD+ RGQS+SRSRSKSR QE+D
Sbjct: 570 RDEREHDRDRHDKEHRYREERDGYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEED 629
Query: 637 HRSRSRDADYGKRRRLPSE 581
HRSRSRD +YGKRRR PSE
Sbjct: 630 HRSRSRDTNYGKRRRAPSE 648
>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Nicotiana sylvestris]
Length = 648
Score = 176 bits (447), Expect = 2e-41
Identities = 98/199 (49%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Frame = -3
Query: 1168 MMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHNSGMWADTSMAGWGG 989
M+P FP +N + LPGVAPHVNPAFF G + GMW DTS GWGG
Sbjct: 453 MIPQFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGG 512
Query: 988 SAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGR--SNVSREKDRGSEHXXXXXXXXXX 815
+EHGRRTRESSYGG+D S+YGYGE H++G S VSREK+RGSE
Sbjct: 513 ---EEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSERRH 569
Query: 814 XXXXXXXXXXXXXXR-YREEKDGHRDHXXXXXXXXXXXXXXRGQSASRSRSKSRMIQEDD 638
Y+EE+DG+RD+ RGQS+SRSRS+SR QE+D
Sbjct: 570 RDEREHDRERYDREHRYKEERDGYRDYRQKERESEYEDDYDRGQSSSRSRSRSRAAQEED 629
Query: 637 HRSRSRDADYGKRRRLPSE 581
HRSRSRD +YGKRRR PSE
Sbjct: 630 HRSRSRDTNYGKRRRAPSE 648
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 176 bits (447), Expect = 2e-41
Identities = 104/221 (47%), Positives = 120/221 (54%), Gaps = 6/221 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +N + L GVAPHVNPAFF
Sbjct: 428 TYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGPSG 487
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGR--SNVS 872
G N+GMW+DTSM GWG +E GRRTRESSYGGDD S+YGYGE HE+G S S
Sbjct: 488 MDGPNAGMWSDTSMGGWG----EEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAAS 543
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXX 704
REK+R SE YREEK+ +RDH
Sbjct: 544 REKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYED 603
Query: 703 XXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSRS+SR + E+D+RSRSRDADYGKRRRLPSE
Sbjct: 604 DWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 176 bits (445), Expect = 4e-41
Identities = 101/220 (45%), Positives = 120/220 (54%), Gaps = 5/220 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +NT+ L GVAPHVNPAFF
Sbjct: 436 TYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASG 495
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSN-VSR 869
G ++GMW D SM GWGG DEHGRRTRESSYGG+D S+YGYG+ HE+GRS+ SR
Sbjct: 496 MDGPHAGMWTDASMGGWGG---DEHGRRTRESSYGGEDGASEYGYGDANHEKGRSSGASR 552
Query: 868 EKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXXX 701
EK+R SE YREEKD +R+H
Sbjct: 553 EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612
Query: 700 XXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSR +S + E++HRSRSRD DYGK+RRLPSE
Sbjct: 613 WDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 175 bits (443), Expect = 7e-41
Identities = 103/221 (46%), Positives = 117/221 (52%), Gaps = 6/221 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +N + L GVAPHVNPAFF
Sbjct: 438 TYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSG 497
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGR--SNVS 872
G + GMW D+SM GW G+EHGRRTRESSYGGDD SDYGYGE HE+G + S
Sbjct: 498 MDGPHPGMWTDSSMGGW---VGEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTAS 554
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXX 704
REKDRGSE +REEKD +RD
Sbjct: 555 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 614
Query: 703 XXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSRS+S I ++DHRSRSRD DYGKRRRLPSE
Sbjct: 615 NWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 175 bits (443), Expect = 7e-41
Identities = 103/221 (46%), Positives = 117/221 (52%), Gaps = 6/221 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +N + L GVAPHVNPAFF
Sbjct: 441 TYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSG 500
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSNV--S 872
G + GMW D+SM GW G+EHGRRTRESSYGGDD SDYGYGE HE+G + S
Sbjct: 501 MDGPHPGMWTDSSMGGW---VGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAAS 557
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXX 704
REKDRGSE +REEKD +RD
Sbjct: 558 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 617
Query: 703 XXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RG S+SRSRS+SR I ++DHRSRSRD DYGKRRRLPSE
Sbjct: 618 NWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 174 bits (442), Expect = 9e-41
Identities = 103/221 (46%), Positives = 117/221 (52%), Gaps = 6/221 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +N + L GVAPHVNPAFF
Sbjct: 441 TYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSG 500
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSNV--S 872
G + GMW D+SM GW G+EHGRRTRESSYGGDD SDYGYGE HE+G + S
Sbjct: 501 MDGPHPGMWTDSSMGGW---LGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAAS 557
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXX 704
REKDRGSE +REEKD +RD
Sbjct: 558 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 617
Query: 703 XXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RG S+SRSRS+SR I ++DHRSRSRD DYGKRRRLPSE
Sbjct: 618 NWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 174 bits (441), Expect = 1e-40
Identities = 103/221 (46%), Positives = 117/221 (52%), Gaps = 6/221 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +N + L GVAPHVNPAFF
Sbjct: 438 TYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGSSG 497
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSNV--S 872
G + GMW D+SM GW G+EHGRRTRESSYGGDD SDYGYGE HE+G + S
Sbjct: 498 MDGPHPGMWTDSSMGGW---LGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAAS 554
Query: 871 REKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXX 704
REKDRGSE +REEKD +RD
Sbjct: 555 REKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDD 614
Query: 703 XXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSRS+S I ++DHRSRSRD DYGKRRRLPSE
Sbjct: 615 NWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Nicotiana tomentosiformis]
Length = 648
Score = 174 bits (440), Expect = 2e-40
Identities = 97/199 (48%), Positives = 115/199 (57%), Gaps = 3/199 (1%)
Frame = -3
Query: 1168 MMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGHNSGMWADTSMAGWGG 989
M+P FP +N + LPGVAPHVNPAFF G + GMW DTS GWGG
Sbjct: 453 MIPQFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGG 512
Query: 988 SAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGR--SNVSREKDRGSEHXXXXXXXXXX 815
+EHGRRTRESSYGG+D S+YGYGE H++G S VSREK+RGSE
Sbjct: 513 ---EEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSERRH 569
Query: 814 XXXXXXXXXXXXXXR-YREEKDGHRDHXXXXXXXXXXXXXXRGQSASRSRSKSRMIQEDD 638
Y+EE+DG+R + RGQS+SRSRS+SR QE+D
Sbjct: 570 RDEREHDRERYDREHRYKEERDGYRHYRHKEREAEYEDDYDRGQSSSRSRSRSRAAQEED 629
Query: 637 HRSRSRDADYGKRRRLPSE 581
HRSRSRD +YGKRRR PSE
Sbjct: 630 HRSRSRDTNYGKRRRAPSE 648
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 172 bits (437), Expect = 4e-40
Identities = 101/220 (45%), Positives = 118/220 (53%), Gaps = 5/220 (2%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+PSFP +NT+ L GVAPHVNPAFF
Sbjct: 437 TYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGGPG 496
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERGRSN-VSR 869
G + GMW DTSM GWGG DEHGRRTRESSYGG+D S+YGYG+ HE+GRS+ SR
Sbjct: 497 MDGPHVGMWTDTSMGGWGG---DEHGRRTRESSYGGEDGASEYGYGDANHEKGRSSGASR 553
Query: 868 EKDRGSEHXXXXXXXXXXXXXXXXXXXXXXXXR----YREEKDGHRDHXXXXXXXXXXXX 701
EK+R S+ YREEKD +R+H
Sbjct: 554 EKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 613
Query: 700 XXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SRSR +S + E+ RSRSRD DYGKRRRLPSE
Sbjct: 614 LDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Pyrus x bretschneideri]
Length = 656
Score = 171 bits (432), Expect = 1e-39
Identities = 102/222 (45%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+P FP +NT+ L GVAPHVNPAFF
Sbjct: 439 TYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFARGMATNGMGMMGSSG 498
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERG--RSNVS 872
GH++GMW D SM WGG +EHGRRTRESSYGGDD S+YGYG+T +E+G S S
Sbjct: 499 MEGHHAGMWNDPSMGAWGG---EEHGRRTRESSYGGDDNASEYGYGDTNNEKGPRSSAAS 555
Query: 871 REKDRGSE-----HXXXXXXXXXXXXXXXXXXXXXXXXRYREEKDGHRDHXXXXXXXXXX 707
RE++RGSE + RY+EEKD +RDH
Sbjct: 556 RERERGSERDWSGNSERRHRDDREQDYERSERGEHREHRYKEEKDSYRDHRQRDRDGGYE 615
Query: 706 XXXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SR RS+S+ + EDDHRSRSRD DY KRRRLPSE
Sbjct: 616 DDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-KRRRLPSE 656
>ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 656
Score = 170 bits (430), Expect = 2e-39
Identities = 102/222 (45%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Frame = -3
Query: 1225 TYMXXXXXXXXXXXXXXXGMMPSFPTMNTVALPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1046
TYM GM+P FP +NT+ L GVAPHVNPAFF
Sbjct: 439 TYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSG 498
Query: 1045 XXGHNSGMWADTSMAGWGGSAGDEHGRRTRESSYGGDDVTSDYGYGETGHERG--RSNVS 872
GH++GMW D SM WGG +EHGRRTRESSYGGDD S+YGYG+T +E+G S S
Sbjct: 499 MEGHHAGMWNDPSMGTWGG---EEHGRRTRESSYGGDDNASEYGYGDTNNEKGPRSSAAS 555
Query: 871 REKDRGSE-----HXXXXXXXXXXXXXXXXXXXXXXXXRYREEKDGHRDHXXXXXXXXXX 707
RE++RGSE + RY+EEKD +RDH
Sbjct: 556 RERERGSERDWSGNSERRHRDDREQDYERSERGEQREHRYKEEKDSYRDHRQRDRDGGYE 615
Query: 706 XXXXRGQSASRSRSKSRMIQEDDHRSRSRDADYGKRRRLPSE 581
RGQS+SR RS+S+ + EDDHRSRSRD DY KRRRLPSE
Sbjct: 616 DDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-KRRRLPSE 656