BLASTX nr result

ID: Cinnamomum25_contig00006840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00006840
         (474 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDX73219.1| BnaC06g36670D [Brassica napus]                         58   3e-06
ref|XP_009106253.1| PREDICTED: calcium-dependent protein kinase ...    57   4e-06
gb|AGG35971.1| calcium-dependent protein kinase 29 [Brassica napus]    57   4e-06

>emb|CDX73219.1| BnaC06g36670D [Brassica napus]
          Length = 552

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -1

Query: 306 SSRTENQTHQMGNYFTR--TQDIPIASASDNSPPHXXXXXXXXXXXQHXXXXXXXXXXXX 133
           ++RT++  ++MG  F++  TQ+IPI+S+SD++PPH           Q             
Sbjct: 16  NTRTKHFFNRMGFCFSKSQTQEIPISSSSDSTPPHRYQPLPKPTNPQTQTSTFPTNPKPK 75

Query: 132 XXXXXXXXXXPVITILDKPMSDVASYYVLEKELGKGRFGTTYLC 1
                      +  IL++PM D+++ Y L KELG+G+FG TY C
Sbjct: 76  PAPPPSSSGSQIGPILNRPMIDLSALYDLHKELGRGQFGVTYRC 119


>ref|XP_009106253.1| PREDICTED: calcium-dependent protein kinase 29 [Brassica rapa]
           gi|674867201|emb|CDY66815.1| BnaCnng52460D [Brassica
           napus]
          Length = 552

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -1

Query: 306 SSRTENQTHQMGNYFTR--TQDIPIASASDNSPPHXXXXXXXXXXXQHXXXXXXXXXXXX 133
           ++RT++  ++MG  F++  TQ+IPI+S+SD++PPH           Q             
Sbjct: 16  NTRTKHFFNRMGFCFSKSQTQEIPISSSSDSTPPHRYQPLPKPTNPQTQTSTFPTTPKPK 75

Query: 132 XXXXXXXXXXPVITILDKPMSDVASYYVLEKELGKGRFGTTYLC 1
                      +  IL++PM D+++ Y L KELG+G+FG TY C
Sbjct: 76  PAPPPSSSGSQIGPILNRPMIDLSALYDLHKELGRGQFGITYRC 119


>gb|AGG35971.1| calcium-dependent protein kinase 29 [Brassica napus]
          Length = 538

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 SRTENQTHQMGNYFTR--TQDIPIASASDNSPPHXXXXXXXXXXXQHXXXXXXXXXXXXX 130
           +RT++  ++MG  F++  TQ+IPI+S+SD++PPH           Q              
Sbjct: 3   TRTKHFFNRMGFCFSKSQTQEIPISSSSDSTPPHRYQPLPKPTNPQTQTSTFPTNPKPKP 62

Query: 129 XXXXXXXXXPVITILDKPMSDVASYYVLEKELGKGRFGTTYLC 1
                     +  IL++PM D+++ Y L KELG+G+FG TY C
Sbjct: 63  APPPSSSGSQIGPILNRPMIDLSALYDLHKELGRGQFGVTYRC 105


Top