BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00006768
         (2256 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X...   489   e-135
ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X...   489   e-135
ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X...   489   e-135
ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g...   474   e-130
ref|XP_008797066.1| PREDICTED: DNA repair protein UVH3 [Phoenix ...   473   e-130
ref|XP_008230638.1| PREDICTED: DNA repair protein UVH3 isoform X...   452   e-124
ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X...   452   e-124
ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X...   432   e-118
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X...   432   e-118
ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X...   431   e-117
ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X...   431   e-117
ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X...   429   e-117
ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X...   429   e-117
ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X...   429   e-117
ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X...   429   e-117
ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X...   429   e-117
ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X...   429   e-117
gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium r...   429   e-117
gb|KJB11470.1| hypothetical protein B456_001G260400 [Gossypium r...   429   e-117
gb|KJB11469.1| hypothetical protein B456_001G260400 [Gossypium r...   429   e-117

>ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Nelumbo nucifera]
          Length = 1430

 Score =  489 bits (1258), Expect = e-135
 Identities = 338/757 (44%), Positives = 415/757 (54%), Gaps = 19/757 (2%)
 Frame = -2

Query: 2219 STNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNL 2040
            S NC SS A  +S +G+ V ++   F+ DVETY DE            GI MTRDLQRNL
Sbjct: 200  SVNC-SSAAHCNSAMGSAVGDSERGFEDDVETYLDERGCVRVSRLRAMGIRMTRDLQRNL 258

Query: 2039 DXXXXXXXXXXXENTPTNAEAIRKSILG--SPMAAENSHRLEVSAGDGGDETSLMRRKNG 1866
            D           E     +++I   +L         N H      G+  +  + +  + G
Sbjct: 259  DLMKEIEQEKMREKNFAKSDSIVNEVLRIQENTVKNNQH------GEASNVGNNLIGEKG 312

Query: 1865 PTIQGENSDLQETSMLAGKTAMEISFEDD-SGFHATD-EDDGLFAHLVAGXXXXXXXXXX 1692
               QG+N  L E S+L     M ISFEDD    HA D  DD +FA LV G          
Sbjct: 313  ILPQGDNHHLHEHSILGNGNTMVISFEDDVREEHAGDANDDDVFARLVVGDSVMIPYTAI 372

Query: 1691 XXSGKHSSDFASQCSKEKVMLGRNSSSFSIDV-EDNQPSFVNGNNSDEGEVDWEEGVCDV 1515
              S K   D  S CS E+  +         DV + +   F   N +D+ E+DWE GVC+ 
Sbjct: 373  TSSEKQPCDVDSDCSWEEGNVK--------DVNKGSHECFSESNINDDSELDWE-GVCNY 423

Query: 1514 PGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRS 1335
            P   SP PTE+ +TVS+G LEE A+IQEAI+R+LEDF  EK   M     E        +
Sbjct: 424  PENVSPPPTENKKTVSKGCLEEAAEIQEAIKRNLEDFRKEKPTGMHPANIEI-------T 476

Query: 1334 GQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDG-VKRPETVVQKDTLQIND 1158
             Q+    F  +V  L KD   S  +PL              G  ++   VV KD    ND
Sbjct: 477  TQDTAFEFPAQVLDLVKDTVDSLKLPLESNNQQIQSSYGAAGEFEKLNNVVSKDVPPSND 536

Query: 1157 SPEKHSGSFT--------ETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLM 1002
            +P     S          ET  D  Y    L     E  E     LE S++   + ++  
Sbjct: 537  TPMGQLSSSMALGETNEKETLTDELYLVPGLQSLSQEESEKRRFSLEKSNIGPVSPIEPK 596

Query: 1001 EVKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLT----DVLVDAHTNN 834
            E+     +K  D  +  G  A++ E   GS++  SH S   A++L     D LV A  + 
Sbjct: 597  EIHLASDKK-FDAFDDGGALASVTEAMDGSSRDDSHVS---ATELXVMPDDSLVGAAQH- 651

Query: 833  SEAAPLRLSSEITNENFNFQEGAYIDQTTNNVS-KQELVKDQTCGMPPDEGWQYRDEIAS 657
             E  P+  SS   NEN   +E   +++  N+V  K   V D+      D    YRD+   
Sbjct: 652  -ECGPVPCSSHEVNENIIPREEISVEKMENDVEIKNNPVTDEKYDAFSDGRTPYRDKSVI 710

Query: 656  HGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGL 477
              N+E  +E S A LD+EM  L QERM LG+EQRKLERNAESVS EMFAECQELLQMFGL
Sbjct: 711  EDNMEVHIEASRAILDDEMQTLSQERMHLGEEQRKLERNAESVSGEMFAECQELLQMFGL 770

Query: 476  PYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE 297
            PYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE
Sbjct: 771  PYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE 830

Query: 296  TELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSI 117
            +ELGLTREKL  MALLLGSDYTEG+SGIGIVNAIEVV+AFPEEDGLQKF+EWLESPDPSI
Sbjct: 831  SELGLTREKLIHMALLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPSI 890

Query: 116  LGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAE 6
            L K +AH+  ++ K+ LK   N      NY++G   E
Sbjct: 891  LEKFDAHSESSSRKKLLKVNKND----VNYLEGRVQE 923


>ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Nelumbo nucifera]
          Length = 1264

 Score =  489 bits (1258), Expect = e-135
 Identities = 338/757 (44%), Positives = 415/757 (54%), Gaps = 19/757 (2%)
 Frame = -2

Query: 2219 STNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNL 2040
            S NC SS A  +S +G+ V ++   F+ DVETY DE            GI MTRDLQRNL
Sbjct: 34   SVNC-SSAAHCNSAMGSAVGDSERGFEDDVETYLDERGCVRVSRLRAMGIRMTRDLQRNL 92

Query: 2039 DXXXXXXXXXXXENTPTNAEAIRKSILG--SPMAAENSHRLEVSAGDGGDETSLMRRKNG 1866
            D           E     +++I   +L         N H      G+  +  + +  + G
Sbjct: 93   DLMKEIEQEKMREKNFAKSDSIVNEVLRIQENTVKNNQH------GEASNVGNNLIGEKG 146

Query: 1865 PTIQGENSDLQETSMLAGKTAMEISFEDD-SGFHATD-EDDGLFAHLVAGXXXXXXXXXX 1692
               QG+N  L E S+L     M ISFEDD    HA D  DD +FA LV G          
Sbjct: 147  ILPQGDNHHLHEHSILGNGNTMVISFEDDVREEHAGDANDDDVFARLVVGDSVMIPYTAI 206

Query: 1691 XXSGKHSSDFASQCSKEKVMLGRNSSSFSIDV-EDNQPSFVNGNNSDEGEVDWEEGVCDV 1515
              S K   D  S CS E+  +         DV + +   F   N +D+ E+DWE GVC+ 
Sbjct: 207  TSSEKQPCDVDSDCSWEEGNVK--------DVNKGSHECFSESNINDDSELDWE-GVCNY 257

Query: 1514 PGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRS 1335
            P   SP PTE+ +TVS+G LEE A+IQEAI+R+LEDF  EK   M     E        +
Sbjct: 258  PENVSPPPTENKKTVSKGCLEEAAEIQEAIKRNLEDFRKEKPTGMHPANIEI-------T 310

Query: 1334 GQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDG-VKRPETVVQKDTLQIND 1158
             Q+    F  +V  L KD   S  +PL              G  ++   VV KD    ND
Sbjct: 311  TQDTAFEFPAQVLDLVKDTVDSLKLPLESNNQQIQSSYGAAGEFEKLNNVVSKDVPPSND 370

Query: 1157 SPEKHSGSFT--------ETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLM 1002
            +P     S          ET  D  Y    L     E  E     LE S++   + ++  
Sbjct: 371  TPMGQLSSSMALGETNEKETLTDELYLVPGLQSLSQEESEKRRFSLEKSNIGPVSPIEPK 430

Query: 1001 EVKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLT----DVLVDAHTNN 834
            E+     +K  D  +  G  A++ E   GS++  SH S   A++L     D LV A  + 
Sbjct: 431  EIHLASDKK-FDAFDDGGALASVTEAMDGSSRDDSHVS---ATELXVMPDDSLVGAAQH- 485

Query: 833  SEAAPLRLSSEITNENFNFQEGAYIDQTTNNVS-KQELVKDQTCGMPPDEGWQYRDEIAS 657
             E  P+  SS   NEN   +E   +++  N+V  K   V D+      D    YRD+   
Sbjct: 486  -ECGPVPCSSHEVNENIIPREEISVEKMENDVEIKNNPVTDEKYDAFSDGRTPYRDKSVI 544

Query: 656  HGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGL 477
              N+E  +E S A LD+EM  L QERM LG+EQRKLERNAESVS EMFAECQELLQMFGL
Sbjct: 545  EDNMEVHIEASRAILDDEMQTLSQERMHLGEEQRKLERNAESVSGEMFAECQELLQMFGL 604

Query: 476  PYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE 297
            PYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE
Sbjct: 605  PYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE 664

Query: 296  TELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSI 117
            +ELGLTREKL  MALLLGSDYTEG+SGIGIVNAIEVV+AFPEEDGLQKF+EWLESPDPSI
Sbjct: 665  SELGLTREKLIHMALLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPSI 724

Query: 116  LGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAE 6
            L K +AH+  ++ K+ LK   N      NY++G   E
Sbjct: 725  LEKFDAHSESSSRKKLLKVNKND----VNYLEGRVQE 757


>ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Nelumbo nucifera]
          Length = 1571

 Score =  489 bits (1258), Expect = e-135
 Identities = 338/757 (44%), Positives = 415/757 (54%), Gaps = 19/757 (2%)
 Frame = -2

Query: 2219 STNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNL 2040
            S NC SS A  +S +G+ V ++   F+ DVETY DE            GI MTRDLQRNL
Sbjct: 341  SVNC-SSAAHCNSAMGSAVGDSERGFEDDVETYLDERGCVRVSRLRAMGIRMTRDLQRNL 399

Query: 2039 DXXXXXXXXXXXENTPTNAEAIRKSILG--SPMAAENSHRLEVSAGDGGDETSLMRRKNG 1866
            D           E     +++I   +L         N H      G+  +  + +  + G
Sbjct: 400  DLMKEIEQEKMREKNFAKSDSIVNEVLRIQENTVKNNQH------GEASNVGNNLIGEKG 453

Query: 1865 PTIQGENSDLQETSMLAGKTAMEISFEDD-SGFHATD-EDDGLFAHLVAGXXXXXXXXXX 1692
               QG+N  L E S+L     M ISFEDD    HA D  DD +FA LV G          
Sbjct: 454  ILPQGDNHHLHEHSILGNGNTMVISFEDDVREEHAGDANDDDVFARLVVGDSVMIPYTAI 513

Query: 1691 XXSGKHSSDFASQCSKEKVMLGRNSSSFSIDV-EDNQPSFVNGNNSDEGEVDWEEGVCDV 1515
              S K   D  S CS E+  +         DV + +   F   N +D+ E+DWE GVC+ 
Sbjct: 514  TSSEKQPCDVDSDCSWEEGNVK--------DVNKGSHECFSESNINDDSELDWE-GVCNY 564

Query: 1514 PGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRS 1335
            P   SP PTE+ +TVS+G LEE A+IQEAI+R+LEDF  EK   M     E        +
Sbjct: 565  PENVSPPPTENKKTVSKGCLEEAAEIQEAIKRNLEDFRKEKPTGMHPANIEI-------T 617

Query: 1334 GQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDG-VKRPETVVQKDTLQIND 1158
             Q+    F  +V  L KD   S  +PL              G  ++   VV KD    ND
Sbjct: 618  TQDTAFEFPAQVLDLVKDTVDSLKLPLESNNQQIQSSYGAAGEFEKLNNVVSKDVPPSND 677

Query: 1157 SPEKHSGSFT--------ETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLM 1002
            +P     S          ET  D  Y    L     E  E     LE S++   + ++  
Sbjct: 678  TPMGQLSSSMALGETNEKETLTDELYLVPGLQSLSQEESEKRRFSLEKSNIGPVSPIEPK 737

Query: 1001 EVKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLT----DVLVDAHTNN 834
            E+     +K  D  +  G  A++ E   GS++  SH S   A++L     D LV A  + 
Sbjct: 738  EIHLASDKK-FDAFDDGGALASVTEAMDGSSRDDSHVS---ATELXVMPDDSLVGAAQH- 792

Query: 833  SEAAPLRLSSEITNENFNFQEGAYIDQTTNNVS-KQELVKDQTCGMPPDEGWQYRDEIAS 657
             E  P+  SS   NEN   +E   +++  N+V  K   V D+      D    YRD+   
Sbjct: 793  -ECGPVPCSSHEVNENIIPREEISVEKMENDVEIKNNPVTDEKYDAFSDGRTPYRDKSVI 851

Query: 656  HGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGL 477
              N+E  +E S A LD+EM  L QERM LG+EQRKLERNAESVS EMFAECQELLQMFGL
Sbjct: 852  EDNMEVHIEASRAILDDEMQTLSQERMHLGEEQRKLERNAESVSGEMFAECQELLQMFGL 911

Query: 476  PYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE 297
            PYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE
Sbjct: 912  PYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE 971

Query: 296  TELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSI 117
            +ELGLTREKL  MALLLGSDYTEG+SGIGIVNAIEVV+AFPEEDGLQKF+EWLESPDPSI
Sbjct: 972  SELGLTREKLIHMALLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPSI 1031

Query: 116  LGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAE 6
            L K +AH+  ++ K+ LK   N      NY++G   E
Sbjct: 1032 LEKFDAHSESSSRKKLLKVNKND----VNYLEGRVQE 1064


>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
          Length = 1567

 Score =  474 bits (1219), Expect = e-130
 Identities = 325/735 (44%), Positives = 416/735 (56%), Gaps = 21/735 (2%)
 Frame = -2

Query: 2165 VNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENT--- 1995
            V+E   +F  DVETY DE            G+ MTRDLQRNLD                 
Sbjct: 369  VSELIREFGPDVETYCDERGRVRVSRVRGLGLRMTRDLQRNLDLMKEYEQEKVWGQICKD 428

Query: 1994 --PTNAEAIRKSILGSPMAAENSHRLE--VSAGDGGDETSLMRRKNGPTI-QGENSDLQE 1830
              PTNA+ +      S   +ENS  L   +S    G+ TS    KNG  I +GEN    E
Sbjct: 429  PEPTNAKEVPNV---SKSLSENSLTLNARISNEKTGENTST---KNGALILEGENHHFDE 482

Query: 1829 TSMLAGKTAMEISF-EDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKHSSDFASQ 1653
            + +L  K A+EISF EDDSG    D DD LF HLV+G              + +S+   +
Sbjct: 483  SPILGNKNAIEISFLEDDSGMK--DIDDNLFLHLVSGSPTSKFDQSSHPD-RSTSESELE 539

Query: 1652 CSKEKVMLGRNSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGASPCPTEHAET 1473
            C  E+ M+  NS S     +++Q      N++ E EVDWE+GVC VP  ASP   +  + 
Sbjct: 540  CIWEEGMVEGNSGSQKSGHKESQSFLAERNSNVEDEVDWEDGVCHVPKVASPKQAKPEKA 599

Query: 1472 VSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENRSGFSLEVPA 1293
            VS G LEEEADIQEAIRRSL+DF  +KS  M SE +      +G S ++     SL   +
Sbjct: 600  VSIGLLEEEADIQEAIRRSLDDFEKQKSSIMTSENQ-----ILGESSEDRSFARSLFNNS 654

Query: 1292 LEKDMSVSSNMPLNDVL-HSEALCMTVDGVKRPETVVQKDTLQINDSPEKHSGSFTETRV 1116
                    +N+PL   +  S  LC TV    + +       L++ DS +KH    T + V
Sbjct: 655  TLSKSIGDTNVPLESHIGRSLPLCATVAEHGQHDNA---GVLRMTDSGKKHLSPSTSSGV 711

Query: 1115 DTKYRHQDLTLGHHEVIEDGY-VCLETSHMEGTTNLKLMEVKTTGQEKCLDKSNQQGKEA 939
            +   +   +     +  E G  +C   +      +  L ++K    + CLD S     E 
Sbjct: 712  EVDRKSSVMNDSKDD--ESGRTLCQINAPSAEPVDDHLSQIK----QCCLDTSEVAKNEC 765

Query: 938  TL---GEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNENFNFQEG 768
            +L    E+   S  IS + S    +    VL  AH ++  A+   LS    N +   Q+ 
Sbjct: 766  SLISTNEFAETSYDISVNTSSVPDA----VLSAAHHDDCAASQSSLSFGNGNNDVYSQKS 821

Query: 767  AYIDQTTNN-------VSKQELVKDQTCGMPPDEGWQYRDEIASHGNVEQQLERSEASLD 609
            + +++  +N       V  Q  + D   G    +  +Y D+          +E  EA+LD
Sbjct: 822  SLVEEAVDNDGEEPEQVIAQNSIPDSVRGKTTIQ--EYPDD---------HMELFEANLD 870

Query: 608  EEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 429
            +E+ LLRQE  DLG+EQRKLERNAE+VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM
Sbjct: 871  DEISLLRQECFDLGNEQRKLERNAETVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 930

Query: 428  ELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALL 249
            E+ NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE+ELGL REK+ RMALL
Sbjct: 931  EMTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLNREKIIRMALL 990

Query: 248  LGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRK 69
            LGSDYTEGVSGIGIVNAIEVV+AFPEEDGL+KF+EW+ESPDP+IL KL++H G ++  R 
Sbjct: 991  LGSDYTEGVSGIGIVNAIEVVHAFPEEDGLKKFKEWIESPDPAILEKLDSHTGGSSRNRS 1050

Query: 68   LKACSNGADGLTNYV 24
             KA  + ADG+   V
Sbjct: 1051 SKASKDNADGMRKNV 1065


>ref|XP_008797066.1| PREDICTED: DNA repair protein UVH3 [Phoenix dactylifera]
          Length = 1467

 Score =  473 bits (1218), Expect = e-130
 Identities = 321/734 (43%), Positives = 412/734 (56%), Gaps = 13/734 (1%)
 Frame = -2

Query: 2183 SVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXX 2004
            S     V+E   DF  DVETY DE            G+HMTRDLQRNLD           
Sbjct: 360  SATDVSVSELIRDFGPDVETYCDERGHVRVSRVRGLGMHMTRDLQRNLDLMKEYEQEKVW 419

Query: 2003 ENT-----PTNAEAIRKSILGSPMAAENSHRLE--VSAGDGGDETSLMRRKNGPTI-QGE 1848
              +     PTNA+ +      S   +ENS  L   +S    G+ TS    KNG  I + E
Sbjct: 420  GGSCKDPEPTNAKEVPNV---SKSLSENSLTLSACISNERNGETTST---KNGALILEDE 473

Query: 1847 NSDLQETSMLAGKTAMEISF-EDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKHS 1671
            N    E+ +L  K A+EISF EDDSG    D DD LF HLV+G              + +
Sbjct: 474  NHRFHESPILGNKNAIEISFSEDDSGMK--DIDDNLFHHLVSGSPTAKLFDRNSHPDRST 531

Query: 1670 SDFASQCSKEKVMLGRNSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGASPCP 1491
             +  S+C  E+ M+  N+ S     +++Q      N+ +E EVDWE+GVC VP  ASP  
Sbjct: 532  CESESECIWEEGMVEGNAGSQKSGHKESQSFLAERNSYEEDEVDWEDGVCHVPRVASPRQ 591

Query: 1490 TEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENRSGF 1311
             +  ++VS G LEEEAD+QEAIRRSLEDF   KS  M SE +      +G+S ++     
Sbjct: 592  AKPEKSVSIGLLEEEADMQEAIRRSLEDFEKRKSSIMTSENQ-----ILGKSSEDRGFVG 646

Query: 1310 SLEVPALEKDMSVSSNMPL-NDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHSGS 1134
            SL   +     S  +N+ L + +  S  L  T+D   + +   ++D LQ+ DS +KH   
Sbjct: 647  SLFNNSTLSKSSRDTNVHLESHIGRSLPLSATMDEHGQHDNASRQDVLQMTDSGKKHLSP 706

Query: 1133 FTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKTTGQEKCLDKSNQ 954
             T + VD   +   +     +        +     E      L ++    ++ CLD S  
Sbjct: 707  STSSGVDVDRKSSPMNDSKDDESGRALYQINVPSAEPVDG-HLGQI----EQCCLDTSEV 761

Query: 953  QGKEATL---GEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNENF 783
               E  L    E+   S  IS++ S    +    VL  AH ++  A+   L+    N + 
Sbjct: 762  AKNEHNLISTNEFAETSYDISANTSSVPDA----VLSAAHHDDRAASQSSLAFGKGNNDE 817

Query: 782  NFQEGAYIDQTTNNVSKQELVKDQTCGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEE 603
              Q+ + +++  +N  K+     +   +P  +  + +  I    N    L   EA LD E
Sbjct: 818  YSQKSSLVEEAVDNNGKEPEQVTEKNSIP--DSVRVKTTIQECPNDHTDL--FEAHLDNE 873

Query: 602  MLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 423
            + LLRQE  DLG+EQRKLERNAE+VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+
Sbjct: 874  ISLLRQECFDLGNEQRKLERNAETVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEM 933

Query: 422  VNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLG 243
              LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE+ELGL R  + RMALLLG
Sbjct: 934  TKLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLNRGNIIRMALLLG 993

Query: 242  SDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLK 63
            SDYTEGVSGIGIVNAIEVV+AF EEDGL KFREW+ESPDPSIL KL++H G ++ KR  K
Sbjct: 994  SDYTEGVSGIGIVNAIEVVHAFAEEDGLNKFREWIESPDPSILEKLDSHTGCSSRKRSSK 1053

Query: 62   ACSNGADGLTNYVD 21
            A    ADG+   V+
Sbjct: 1054 ASKEDADGMRKNVE 1067


>ref|XP_008230638.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Prunus mume]
          Length = 1480

 Score =  452 bits (1163), Expect = e-124
 Identities = 315/733 (42%), Positives = 397/733 (54%), Gaps = 12/733 (1%)
 Frame = -2

Query: 2225 SESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQR 2046
            S S N + ST   ++V G   +E+ + FD ++ETY DE            GI MTRDLQR
Sbjct: 452  SNSRNSVPST---NNVTGATPDESTSVFDDNIETYLDERGHLRVSRVRAMGIRMTRDLQR 508

Query: 2045 NLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGD--ETSLMR 1878
            NLD            N   N   +   + I  S  +  N   +E S GD GD  +T ++R
Sbjct: 509  NLDLMKEIEQEKTNTNKIINTRDMLNERDIDISKSSFSNRKVIETSCGDNGDSIDTGVLR 568

Query: 1877 -----RKNGPTIQGENS--DLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGX 1719
                 +K   +  G+NS  D      L  +T +EIS ED     + D DD LFA LVAG 
Sbjct: 569  SHPDQKKVLESSIGDNSLNDRNNQCTLKLETPIEISIEDGGESKSFDGDDDLFASLVAGN 628

Query: 1718 XXXXXXXXXXXSGKHSSDFASQCSKEKVMLGRNSSSFSIDVEDNQPSFVNGNNSDEGEVD 1539
                         K SS   S C  E+          +++V+   P  V GN SD+ EV+
Sbjct: 629  AVTTNANDILR--KQSSGSDSDCDWEEG---------TVEVKSKVPR-VEGNMSDDSEVE 676

Query: 1538 WEEGVCDVPGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEA 1359
            WEEGVC +    S  P E  ETVS+G  EEEA+ QEAIRRSLED    K     S  E+ 
Sbjct: 677  WEEGVCGITENTSSFPRECGETVSKGYFEEEANFQEAIRRSLEDIGDVKCAYASSAEEK- 735

Query: 1358 DLAAVGRSGQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQK 1179
             L   G    +       E   +E  +        N     E+ C  VDGVK+ ++V   
Sbjct: 736  -LQCFGGEAYKGADFIDRETKIVEAVLVGKIGKRQN-----ESSCDIVDGVKKMKSVTDL 789

Query: 1178 DTLQINDSPEKHSGSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLME 999
            D+      P +   + +E                 E    G  C E+    GT  + ++ 
Sbjct: 790  DS-----PPAQTMQNVSE----------------RENFCGGMQCAESVTPSGTKEVHMIT 828

Query: 998  VKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAP 819
                  E+ L   N+    +TL        K  +H+ DA++ D TD  VD   N  EA P
Sbjct: 829  ------EQVLGTFNEDDSLSTLPNTLE---KNKAHSFDALSCDATD-WVDDQKNEIEAEP 878

Query: 818  LRLSSEITNENFNFQEGAYIDQTTNNVSKQEL-VKDQTCGMPPDEGWQYRDEIASHGNVE 642
                 E+ N       G+   + TN+    +  VK+++      E     D+ + + +  
Sbjct: 879  SCHIVEMANPAA--LTGSLTGKLTNDCDVDKTWVKEKSHDNFFQESEHSWDKSSLNSDAN 936

Query: 641  QQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIA 462
             ++E +EA+L+EEML+L QE M+LGDEQR+LERN ESVSSEMF ECQELLQMFG+PYIIA
Sbjct: 937  ARVEATEANLEEEMLILGQECMNLGDEQRRLERNVESVSSEMFTECQELLQMFGIPYIIA 996

Query: 461  PMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGL 282
            PMEAEAQCAYMEL NLVDGVVTDDSDVFLFGA+SVYKNIFDDRKYVETYFMKD+E ELGL
Sbjct: 997  PMEAEAQCAYMELANLVDGVVTDDSDVFLFGAQSVYKNIFDDRKYVETYFMKDVEKELGL 1056

Query: 281  TREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLN 102
            +REKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL KFR+W+ESPDP+ILGK +
Sbjct: 1057 SREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFRDWIESPDPTILGKFD 1116

Query: 101  AHAGHNAGKRKLK 63
               G  A KR  K
Sbjct: 1117 GETGSGAKKRGSK 1129


>ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Prunus mume]
          Length = 1681

 Score =  452 bits (1163), Expect = e-124
 Identities = 315/733 (42%), Positives = 397/733 (54%), Gaps = 12/733 (1%)
 Frame = -2

Query: 2225 SESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQR 2046
            S S N + ST   ++V G   +E+ + FD ++ETY DE            GI MTRDLQR
Sbjct: 452  SNSRNSVPST---NNVTGATPDESTSVFDDNIETYLDERGHLRVSRVRAMGIRMTRDLQR 508

Query: 2045 NLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGD--ETSLMR 1878
            NLD            N   N   +   + I  S  +  N   +E S GD GD  +T ++R
Sbjct: 509  NLDLMKEIEQEKTNTNKIINTRDMLNERDIDISKSSFSNRKVIETSCGDNGDSIDTGVLR 568

Query: 1877 -----RKNGPTIQGENS--DLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGX 1719
                 +K   +  G+NS  D      L  +T +EIS ED     + D DD LFA LVAG 
Sbjct: 569  SHPDQKKVLESSIGDNSLNDRNNQCTLKLETPIEISIEDGGESKSFDGDDDLFASLVAGN 628

Query: 1718 XXXXXXXXXXXSGKHSSDFASQCSKEKVMLGRNSSSFSIDVEDNQPSFVNGNNSDEGEVD 1539
                         K SS   S C  E+          +++V+   P  V GN SD+ EV+
Sbjct: 629  AVTTNANDILR--KQSSGSDSDCDWEEG---------TVEVKSKVPR-VEGNMSDDSEVE 676

Query: 1538 WEEGVCDVPGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEA 1359
            WEEGVC +    S  P E  ETVS+G  EEEA+ QEAIRRSLED    K     S  E+ 
Sbjct: 677  WEEGVCGITENTSSFPRECGETVSKGYFEEEANFQEAIRRSLEDIGDVKCAYASSAEEK- 735

Query: 1358 DLAAVGRSGQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQK 1179
             L   G    +       E   +E  +        N     E+ C  VDGVK+ ++V   
Sbjct: 736  -LQCFGGEAYKGADFIDRETKIVEAVLVGKIGKRQN-----ESSCDIVDGVKKMKSVTDL 789

Query: 1178 DTLQINDSPEKHSGSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLME 999
            D+      P +   + +E                 E    G  C E+    GT  + ++ 
Sbjct: 790  DS-----PPAQTMQNVSE----------------RENFCGGMQCAESVTPSGTKEVHMIT 828

Query: 998  VKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAP 819
                  E+ L   N+    +TL        K  +H+ DA++ D TD  VD   N  EA P
Sbjct: 829  ------EQVLGTFNEDDSLSTLPNTLE---KNKAHSFDALSCDATD-WVDDQKNEIEAEP 878

Query: 818  LRLSSEITNENFNFQEGAYIDQTTNNVSKQEL-VKDQTCGMPPDEGWQYRDEIASHGNVE 642
                 E+ N       G+   + TN+    +  VK+++      E     D+ + + +  
Sbjct: 879  SCHIVEMANPAA--LTGSLTGKLTNDCDVDKTWVKEKSHDNFFQESEHSWDKSSLNSDAN 936

Query: 641  QQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIA 462
             ++E +EA+L+EEML+L QE M+LGDEQR+LERN ESVSSEMF ECQELLQMFG+PYIIA
Sbjct: 937  ARVEATEANLEEEMLILGQECMNLGDEQRRLERNVESVSSEMFTECQELLQMFGIPYIIA 996

Query: 461  PMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGL 282
            PMEAEAQCAYMEL NLVDGVVTDDSDVFLFGA+SVYKNIFDDRKYVETYFMKD+E ELGL
Sbjct: 997  PMEAEAQCAYMELANLVDGVVTDDSDVFLFGAQSVYKNIFDDRKYVETYFMKDVEKELGL 1056

Query: 281  TREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLN 102
            +REKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL KFR+W+ESPDP+ILGK +
Sbjct: 1057 SREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFRDWIESPDPTILGKFD 1116

Query: 101  AHAGHNAGKRKLK 63
               G  A KR  K
Sbjct: 1117 GETGSGAKKRGSK 1129


>ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Vitis vinifera]
          Length = 1343

 Score =  432 bits (1112), Expect = e-118
 Identities = 310/763 (40%), Positives = 402/763 (52%), Gaps = 18/763 (2%)
 Frame = -2

Query: 2255 GDTQHQLPATS--ESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXX 2082
            GD Q+Q+P     +S N ++ST++ ++   +   E  + F+ DVETY DE          
Sbjct: 152  GDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASVFNDDVETYLDERGRVRVSRVR 211

Query: 2081 XXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMAAENSHRLEVSAGDG 1902
              GI MTRDLQRNLD                    + K I       +N           
Sbjct: 212  AMGIRMTRDLQRNLD--------------------LMKEIEQDRTNEDN----------- 240

Query: 1901 GDETSLMRRKNGPTIQGENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAG 1722
                      NG     + +   E S+     ++EISFEDD   +  + DD LFA LVAG
Sbjct: 241  ----------NGIVTLNKTN---EQSIPDNGASIEISFEDDGEHNCLNGDDELFASLVAG 287

Query: 1721 XXXXXXXXXXXXSGKHSSDFASQCSKEKVMLGRNSSSFSIDVE-DNQPSFVNGNNSDEGE 1545
                        S +  +D AS    E+ ++     S   +V  + +PS +    SD+ E
Sbjct: 288  NPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVSDDSE 347

Query: 1544 VDWEEGVCDVPGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETE 1365
            V+WEEG CDV    S CP++     S+G LEEE D+QEAIRRSLED   EK+V      +
Sbjct: 348  VEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGEKAVG--ESFK 405

Query: 1364 EADLAAVGRSGQENR-SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETV 1188
            ++D+        E +   F  +    E+D  +  N+P      + + C  VD V++ ++V
Sbjct: 406  DSDIKEYDEKVHEVKDDAFHKKNDKAEQDFPL-ENLP----EQNGSFCKIVDVVEKLDSV 460

Query: 1187 VQKDTLQINDSPEKHSGSFTETRVDTKYRHQDLTLG-----HHEVIEDGYVCLETSHMEG 1023
               +T Q  D+  +   S  E   D  ++ + L          +V E G V  ET+ +  
Sbjct: 461  DGMNTSQSIDASGRQLTSLLE---DNPHKMEVLNNELCEEYQKDVGESGNVGRETNEV-- 515

Query: 1022 TTNLKLMEVKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVL-VDA 846
                 + E  +   +K +D S       TL     G     SH SDA+  ++ D    D+
Sbjct: 516  ---YMIREQLSHASKKSVDTS-------TLANSCSGD---GSHISDAMLGNMPDATPADS 562

Query: 845  HTNNSEAAPLRLSSEITNENFNFQEGAYIDQTT--------NNVSKQELVKDQTCGMPPD 690
               +SEAAP   S+E T+      E     +T         NN     + K++  G    
Sbjct: 563  SKYDSEAAPTWHSNETTDPAIPPGETCIKGKTAVEQKLAEGNNHVNFFMEKERNMGNSVT 622

Query: 689  EGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFA 510
            E      +    G  E  L        EEM++L QE ++LGDEQRKLERNA+ VSSEMFA
Sbjct: 623  ED----KKNVQFGVTEDVL--------EEMMILDQECLNLGDEQRKLERNADCVSSEMFA 670

Query: 509  ECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 330
            ECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFD+RK
Sbjct: 671  ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERK 730

Query: 329  YVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKF 150
            YVETYFMKDIETELGL REK+ RMALLLGSDYTEGVSGIGIVNAIEV+N+FPEEDGL KF
Sbjct: 731  YVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKF 790

Query: 149  REWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVD 21
            REW+ESPDP+ILGK+N   G ++ KR  K  S       N +D
Sbjct: 791  REWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMD 833


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Vitis vinifera]
          Length = 1513

 Score =  432 bits (1112), Expect = e-118
 Identities = 310/763 (40%), Positives = 402/763 (52%), Gaps = 18/763 (2%)
 Frame = -2

Query: 2255 GDTQHQLPATS--ESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXX 2082
            GD Q+Q+P     +S N ++ST++ ++   +   E  + F+ DVETY DE          
Sbjct: 322  GDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASVFNDDVETYLDERGRVRVSRVR 381

Query: 2081 XXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMAAENSHRLEVSAGDG 1902
              GI MTRDLQRNLD                    + K I       +N           
Sbjct: 382  AMGIRMTRDLQRNLD--------------------LMKEIEQDRTNEDN----------- 410

Query: 1901 GDETSLMRRKNGPTIQGENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAG 1722
                      NG     + +   E S+     ++EISFEDD   +  + DD LFA LVAG
Sbjct: 411  ----------NGIVTLNKTN---EQSIPDNGASIEISFEDDGEHNCLNGDDELFASLVAG 457

Query: 1721 XXXXXXXXXXXXSGKHSSDFASQCSKEKVMLGRNSSSFSIDVE-DNQPSFVNGNNSDEGE 1545
                        S +  +D AS    E+ ++     S   +V  + +PS +    SD+ E
Sbjct: 458  NPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVSDDSE 517

Query: 1544 VDWEEGVCDVPGGASPCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETE 1365
            V+WEEG CDV    S CP++     S+G LEEE D+QEAIRRSLED   EK+V      +
Sbjct: 518  VEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGEKAVG--ESFK 575

Query: 1364 EADLAAVGRSGQENR-SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETV 1188
            ++D+        E +   F  +    E+D  +  N+P      + + C  VD V++ ++V
Sbjct: 576  DSDIKEYDEKVHEVKDDAFHKKNDKAEQDFPL-ENLP----EQNGSFCKIVDVVEKLDSV 630

Query: 1187 VQKDTLQINDSPEKHSGSFTETRVDTKYRHQDLTLG-----HHEVIEDGYVCLETSHMEG 1023
               +T Q  D+  +   S  E   D  ++ + L          +V E G V  ET+ +  
Sbjct: 631  DGMNTSQSIDASGRQLTSLLE---DNPHKMEVLNNELCEEYQKDVGESGNVGRETNEV-- 685

Query: 1022 TTNLKLMEVKTTGQEKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVL-VDA 846
                 + E  +   +K +D S       TL     G     SH SDA+  ++ D    D+
Sbjct: 686  ---YMIREQLSHASKKSVDTS-------TLANSCSGD---GSHISDAMLGNMPDATPADS 732

Query: 845  HTNNSEAAPLRLSSEITNENFNFQEGAYIDQTT--------NNVSKQELVKDQTCGMPPD 690
               +SEAAP   S+E T+      E     +T         NN     + K++  G    
Sbjct: 733  SKYDSEAAPTWHSNETTDPAIPPGETCIKGKTAVEQKLAEGNNHVNFFMEKERNMGNSVT 792

Query: 689  EGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFA 510
            E      +    G  E  L        EEM++L QE ++LGDEQRKLERNA+ VSSEMFA
Sbjct: 793  ED----KKNVQFGVTEDVL--------EEMMILDQECLNLGDEQRKLERNADCVSSEMFA 840

Query: 509  ECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 330
            ECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFD+RK
Sbjct: 841  ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERK 900

Query: 329  YVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKF 150
            YVETYFMKDIETELGL REK+ RMALLLGSDYTEGVSGIGIVNAIEV+N+FPEEDGL KF
Sbjct: 901  YVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKF 960

Query: 149  REWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVD 21
            REW+ESPDP+ILGK+N   G ++ KR  K  S       N +D
Sbjct: 961  REWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMD 1003


>ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Solanum lycopersicum]
          Length = 1333

 Score =  431 bits (1109), Expect = e-117
 Identities = 299/748 (39%), Positives = 404/748 (54%), Gaps = 16/748 (2%)
 Frame = -2

Query: 2204 SSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXX 2025
            +ST +  SV+ + V+E    F+ DVETY DE            G+ MTRDLQRNLD    
Sbjct: 139  ASTRKSSSVLESIVSEPETAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKE 198

Query: 2024 XXXXXXXENTP-TNAEAIRKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQGE 1848
                    N   ++   +  + + +P+   ++     S+    D  + +  KN       
Sbjct: 199  IEEENVSRNKDFSDVPTVSDTDVHTPVIVSDTISHLNSSNPDDDGKACLNNKN------- 251

Query: 1847 NSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKHSS 1668
                 E S L   T ++ISFED+      ++DD +FA LVAG            S K S 
Sbjct: 252  -----EQSELRSGTTIQISFEDNFEHDCANDDDDIFASLVAGDPTMEFLMDHSPSKKQSL 306

Query: 1667 DFASQCSKEKVMLGRNSSSFSIDVEDNQ--PSFVNGNNSDEGEVDWEEGVCDVPGGASPC 1494
            D AS    E+ ++ +     S + +  +  P  ++G + DE EV+WEEG  D+       
Sbjct: 307  DSASDVEWEEGVIEKKGDLLSNNSQGERQAPLEIDGMD-DEAEVEWEEGCVDICEDPPLL 365

Query: 1493 PTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEAD----LAAVGRS--- 1335
            P++ +++  +G+LEEEA+ QEA+RRSLED    + +    E E ++    +AA G S   
Sbjct: 366  PSD-SKSAYKGALEEEANYQEAVRRSLEDMKDHRYIDKSHEKEMSEEAIQIAAQGISSES 424

Query: 1334 -GQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQIND 1158
             GQEN        P + K            +L  + L   +      +TV + D    N 
Sbjct: 425  FGQENYC------PTVHK------------ILQQKDLPSEIQTADLHDTVHEMDIAGSNK 466

Query: 1157 SPEKHSGSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKL-MEVKTTGQ 981
            S   H G   + + ++ Y +  +   +     +  +   TSH     +  + ME      
Sbjct: 467  SLGSHMGE--QFQANSGYGNMQIEKANSHADRNLQIEKATSHTNRNLHCDIHMEPTIPLD 524

Query: 980  EKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVL----VDAHTNNSEAAPLR 813
               +D + ++  + T+G   + + + +S  +    S L + +     DA    SEAA   
Sbjct: 525  GSEVDMTKKKIADTTVGVSCNNNTQSASDVTSIEQSTLNESMNARTTDAQEYESEAAAHH 584

Query: 812  LSSEITNENFNFQEGAYIDQTTNNVSKQELVKDQTCGMPPDEGWQYRDEIASHGNVEQQL 633
             + E T     F EG     TT+  S Q L ++  C  P  E     D  ++  + +  +
Sbjct: 585  YTHETTEITKAFTEGF----TTDINSAQNLDEEGACDDPLFERIGNLDSASTKEDQKVMM 640

Query: 632  ERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 453
                ASL+EEM +L +ER  LGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPME
Sbjct: 641  ----ASLEEEMHVLDKEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 696

Query: 452  AEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTRE 273
            AEAQCAYMEL +LVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFMKD+E+ELGL RE
Sbjct: 697  AEAQCAYMELTDLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDVESELGLDRE 756

Query: 272  KLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHA 93
            K+ RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREW+ESPDPSILG L++  
Sbjct: 757  KIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWVESPDPSILGGLDSQV 816

Query: 92   GHNAGKRKLKACSNGADGLTNYVDGESA 9
            G N+ KR  K         T+ ++G +A
Sbjct: 817  GSNSRKRGCKGGDPDMSCSTSNLEGNAA 844


>ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Solanum lycopersicum]
          Length = 1539

 Score =  431 bits (1109), Expect = e-117
 Identities = 299/748 (39%), Positives = 404/748 (54%), Gaps = 16/748 (2%)
 Frame = -2

Query: 2204 SSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXX 2025
            +ST +  SV+ + V+E    F+ DVETY DE            G+ MTRDLQRNLD    
Sbjct: 345  ASTRKSSSVLESIVSEPETAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKE 404

Query: 2024 XXXXXXXENTP-TNAEAIRKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQGE 1848
                    N   ++   +  + + +P+   ++     S+    D  + +  KN       
Sbjct: 405  IEEENVSRNKDFSDVPTVSDTDVHTPVIVSDTISHLNSSNPDDDGKACLNNKN------- 457

Query: 1847 NSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKHSS 1668
                 E S L   T ++ISFED+      ++DD +FA LVAG            S K S 
Sbjct: 458  -----EQSELRSGTTIQISFEDNFEHDCANDDDDIFASLVAGDPTMEFLMDHSPSKKQSL 512

Query: 1667 DFASQCSKEKVMLGRNSSSFSIDVEDNQ--PSFVNGNNSDEGEVDWEEGVCDVPGGASPC 1494
            D AS    E+ ++ +     S + +  +  P  ++G + DE EV+WEEG  D+       
Sbjct: 513  DSASDVEWEEGVIEKKGDLLSNNSQGERQAPLEIDGMD-DEAEVEWEEGCVDICEDPPLL 571

Query: 1493 PTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEAD----LAAVGRS--- 1335
            P++ +++  +G+LEEEA+ QEA+RRSLED    + +    E E ++    +AA G S   
Sbjct: 572  PSD-SKSAYKGALEEEANYQEAVRRSLEDMKDHRYIDKSHEKEMSEEAIQIAAQGISSES 630

Query: 1334 -GQENRSGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQIND 1158
             GQEN        P + K            +L  + L   +      +TV + D    N 
Sbjct: 631  FGQENYC------PTVHK------------ILQQKDLPSEIQTADLHDTVHEMDIAGSNK 672

Query: 1157 SPEKHSGSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKL-MEVKTTGQ 981
            S   H G   + + ++ Y +  +   +     +  +   TSH     +  + ME      
Sbjct: 673  SLGSHMGE--QFQANSGYGNMQIEKANSHADRNLQIEKATSHTNRNLHCDIHMEPTIPLD 730

Query: 980  EKCLDKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVL----VDAHTNNSEAAPLR 813
               +D + ++  + T+G   + + + +S  +    S L + +     DA    SEAA   
Sbjct: 731  GSEVDMTKKKIADTTVGVSCNNNTQSASDVTSIEQSTLNESMNARTTDAQEYESEAAAHH 790

Query: 812  LSSEITNENFNFQEGAYIDQTTNNVSKQELVKDQTCGMPPDEGWQYRDEIASHGNVEQQL 633
             + E T     F EG     TT+  S Q L ++  C  P  E     D  ++  + +  +
Sbjct: 791  YTHETTEITKAFTEGF----TTDINSAQNLDEEGACDDPLFERIGNLDSASTKEDQKVMM 846

Query: 632  ERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 453
                ASL+EEM +L +ER  LGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPME
Sbjct: 847  ----ASLEEEMHVLDKEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 902

Query: 452  AEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTRE 273
            AEAQCAYMEL +LVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFMKD+E+ELGL RE
Sbjct: 903  AEAQCAYMELTDLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDVESELGLDRE 962

Query: 272  KLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHA 93
            K+ RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREW+ESPDPSILG L++  
Sbjct: 963  KIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWVESPDPSILGGLDSQV 1022

Query: 92   GHNAGKRKLKACSNGADGLTNYVDGESA 9
            G N+ KR  K         T+ ++G +A
Sbjct: 1023 GSNSRKRGCKGGDPDMSCSTSNLEGNAA 1050


>ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X6 [Gossypium raimondii]
          Length = 1401

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 133  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 192

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 193  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 242

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 243  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 298

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 299  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 357

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 358  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 414

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 415  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 468

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 469  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 519

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 520  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 572

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 573  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 632

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 633  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 692

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 693  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 752

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 753  FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 812

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 813  GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 866


>ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X5 [Gossypium raimondii]
          Length = 1440

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 172  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 231

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 232  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 281

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 282  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 337

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 338  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 396

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 397  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 453

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 454  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 507

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 508  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 558

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 559  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 611

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 612  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 671

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 672  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 731

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 732  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 791

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 792  FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 851

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 852  GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 905


>ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 323  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 382

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 383  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 432

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 433  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 488

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 489  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 547

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 548  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 604

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 605  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 658

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 659  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 709

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 710  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 762

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 763  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 822

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 823  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 882

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 883  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 942

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 943  FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1002

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1003 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1056


>ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium raimondii]
          Length = 1706

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 438  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 497

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 498  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 547

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 548  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 603

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 604  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 662

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 663  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 719

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 720  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 773

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 774  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 824

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 825  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 877

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 878  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 937

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 938  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 997

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 998  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1057

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 1058 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1117

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1118 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1171


>ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium raimondii]
          Length = 1707

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 439  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 498

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 499  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 548

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 549  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 604

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 605  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 663

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 664  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 720

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 721  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 774

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 775  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 825

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 826  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 878

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 879  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 938

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 939  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 998

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 999  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1058

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 1059 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1118

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1119 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1172


>ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Gossypium raimondii]
          Length = 1710

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 442  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 501

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 502  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 551

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 552  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 607

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 608  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 666

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 667  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 723

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 724  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 777

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 778  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 828

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 829  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 881

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 882  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 941

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 942  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 1001

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 1002 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1061

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 1062 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1121

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1122 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1175


>gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1635

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 401  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 460

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 461  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 510

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 511  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 566

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 567  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 625

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 626  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 682

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 683  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 736

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 737  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 787

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 788  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 840

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 841  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 900

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 901  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 960

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 961  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1020

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 1021 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1080

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1081 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1134


>gb|KJB11470.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1696

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 428  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 487

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 488  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 537

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 538  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 593

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 594  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 652

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 653  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 709

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 710  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 763

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 764  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 814

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 815  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 867

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 868  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 927

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 928  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 987

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 988  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1047

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 1048 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1107

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1108 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1161


>gb|KJB11469.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1700

 Score =  429 bits (1103), Expect = e-117
 Identities = 307/774 (39%), Positives = 407/774 (52%), Gaps = 39/774 (5%)
 Frame = -2

Query: 2207 ISSTARFHSVIGTCVNEARNDFDKDVETYTDEXXXXXXXXXXXXGIHMTRDLQRNLDXXX 2028
            + S+ + +    +  +E+ +  D+DV TY D             GI MTRDLQRNLD   
Sbjct: 432  VKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMK 491

Query: 2027 XXXXXXXXENTPTNAEAI--RKSILGSPMAAENSHRLEVSAGDGGDETSLMRRKNGPTIQ 1854
                     N   N +++  +  I  S   +  +  +E S  D G+  ++          
Sbjct: 492  EIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNV---------- 541

Query: 1853 GENSDLQETSMLAGKTAMEISFEDDSGFHATDEDDGLFAHLVAGXXXXXXXXXXXXSGKH 1674
               ++  + S    ++ MEI+FEDD      D+DD +FA L AG              K 
Sbjct: 542  ---NESNQQSAFETESCMEITFEDDGKTEYFDDDD-IFARLAAGEPVTLPSPEEKSLRKQ 597

Query: 1673 SSDFASQCS-KEKVMLGR-NSSSFSIDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGGAS 1500
             S   S    +E V+ G+ +  +  ++ E N  +    N +D+ EV+WEE   D P  +S
Sbjct: 598  PSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN-KESNITDDSEVEWEEEPSDAPKSSS 656

Query: 1499 PCPTEHAETVSRGSLEEEADIQEAIRRSLEDFTAEKSVPMCSETEEADLAAVGRSGQENR 1320
              P E    +S+G  EEE+D+QEAIRRSL D   EKS    S+  E+    +G +  E+ 
Sbjct: 657  G-PVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESK--NLGENLDEDF 713

Query: 1319 SGFSLEVPALEKDMSVSSNMPLNDVLHSEALCMTVDGVKRPETVVQKDTLQINDSPEKHS 1140
                      EK  + +S+ P + V      C  +D  ++P TV +    +  +SPE  S
Sbjct: 714  GSLH------EKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPS 767

Query: 1139 GSFTETRVDTKYRHQDLTLGHHEVIEDGYVCLETSHMEGTTNLKLMEVKT---TGQEKCL 969
                  +  T        L       DG    ++ H E    +  +E +    TG  K L
Sbjct: 768  PVHNSDKNMT-------ILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTG--KHL 818

Query: 968  DKSNQQGKEATLGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPLRLSSEITNE 789
            D S +    +T+ +      K +SH+ DA   D+ D +       SE  P    S + ++
Sbjct: 819  DVSKEVDGLSTISDSWF---KDNSHSFDAAHGDIPDTIQVDKKTGSEDEP----SNLVSD 871

Query: 788  NFNFQEGAYIDQT---------------TNNVS-----------------KQELVKDQTC 705
            N +  E   +DQ                T N+S                 +QEL  D T 
Sbjct: 872  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 931

Query: 704  GMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVS 525
                ++  Q+ D     GN  ++++ S+ASLDEE+L+L QE +++ DEQRKLERNAESVS
Sbjct: 932  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 991

Query: 524  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELVNLVDGVVTDDSDVFLFGARSVYKNI 345
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 992  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1051

Query: 344  FDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 165
            FDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED
Sbjct: 1052 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1111

Query: 164  GLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGADGLTNYVDGESAES 3
            GL KFREW+ESPDP+ILGKLN   G +A KR  K+     +G      G  + +
Sbjct: 1112 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNN 1165