BLASTX nr result
ID: Cinnamomum25_contig00006385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00006385
(1654 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009398771.1| PREDICTED: DNA topoisomerase 1-like [Musa ac... 200 2e-48
ref|XP_010266803.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo... 197 2e-47
ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo... 197 2e-47
ref|XP_009407901.1| PREDICTED: DNA topoisomerase 1-like isoform ... 164 2e-37
ref|XP_009411876.1| PREDICTED: DNA topoisomerase 1-like [Musa ac... 161 1e-36
ref|XP_008782916.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 157 3e-35
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like [Setaria... 156 4e-35
ref|XP_008798752.1| PREDICTED: DNA topoisomerase 1-like isoform ... 154 3e-34
ref|XP_010913964.1| PREDICTED: DNA topoisomerase 1-like isoform ... 153 3e-34
ref|XP_010913963.1| PREDICTED: DNA topoisomerase 1-like isoform ... 153 3e-34
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A... 152 6e-34
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like isoform ... 149 6e-33
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S... 148 1e-32
ref|XP_006857525.2| PREDICTED: DNA topoisomerase 1 [Amborella tr... 147 2e-32
gb|ERN18992.1| hypothetical protein AMTR_s00061p00026580, partia... 147 2e-32
ref|XP_010928876.1| PREDICTED: DNA topoisomerase 1-like [Elaeis ... 147 2e-32
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b... 142 6e-31
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 142 8e-31
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g... 141 1e-30
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi... 140 4e-30
>ref|XP_009398771.1| PREDICTED: DNA topoisomerase 1-like [Musa acuminata subsp.
malaccensis]
Length = 948
Score = 200 bits (509), Expect = 2e-48
Identities = 170/499 (34%), Positives = 214/499 (42%), Gaps = 13/499 (2%)
Frame = -3
Query: 1460 IAFYGFINPNNFSMGDDDDDGPVVFKR-NITSSKNHQSKSALMNTSSHRHDGASSRHATN 1284
++ +G IN G+DD+ GP++FKR N +S ++H S ++ T H S
Sbjct: 1 MSVHGCINQVMNDSGEDDE-GPIIFKRPNSSSKQSHLSSTSKKTTQKHDGSNLVSGQIAR 59
Query: 1283 NGXXXXXXDEPLVFRRASKEKLLNSAAMKSPPHKHDASSGKRASDAIMKSPHKHDTSS-- 1110
NG R S E L + + P H SS S I S HK T+
Sbjct: 60 NGENS---------RLQSAEVLPTAKTLNEKPISHSQSSVSVQSKHI--SYHKSTTNDVR 108
Query: 1109 GKHASDARAFDRQNSDSLKGKVVLSGKALTENRSVASPKTSTSTAEKSKNSSECNLVTGI 930
K+ + R++ DS GK + L + K + + + +SS+ V
Sbjct: 109 PKYQDVSSLEVRESDDSDDGKPL--SHRLNSPPAAVQKKNTMGSEKTHMHSSDHKFVNKS 166
Query: 929 MEK----KPLKARAXXXXXXXXDKPLSARVSSFTATVKKSNASHVSKEHITSEKGVLSIK 762
+K KP+ R KPLS + SS T V K SH K + S+K
Sbjct: 167 TDKMNLDKPIIKREDSDDSDDE-KPLSLKFSSSTV-VNKGGPSHAMKTQSAKPTLLPSLK 224
Query: 761 -----KSC-DDSEDEKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQNGSGKGDPN 600
K C DDSEDEKPL NGS K + N
Sbjct: 225 INSDIKGCSDDSEDEKPLLSRFQSKAIGSSSMKSSTSDDKPLSSKLKL---NGSSKKEGN 281
Query: 599 CKQXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLAGSVPNKIKAEHEVKKEAKMDVANKIX 420
+ + SV K+K E VKKE K D N
Sbjct: 282 SENRSSGGGQKRPLGDPDPTGSSSVKKAKVSETSASV--KVKHEVAVKKEIKADDTN--- 336
Query: 419 XXXXXXXXXXXXXXXDHIPISQRVKKSVSSDNQSLSKKPTXXXXXXXXXXXXXXXXXXXX 240
H+ ISQR+KKSVSS++ S SK +
Sbjct: 337 ----------------HVSISQRIKKSVSSNSASTSKNVSQKNHSLFKKDIKKMKKKDKD 380
Query: 239 XXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMF 60
KVPPGSGGGQKWTTL+HNGVIFPPPY PHGIKMLY GQPVDLTPEQEEVATMF
Sbjct: 381 SKFSKILKVPPGSGGGQKWTTLEHNGVIFPPPYNPHGIKMLYKGQPVDLTPEQEEVATMF 440
Query: 59 AVMKETEYATKQKFIDNFM 3
AVMK+TEYATK +FI+NFM
Sbjct: 441 AVMKDTEYATKNQFIENFM 459
>ref|XP_010266803.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
Length = 890
Score = 197 bits (502), Expect = 2e-47
Identities = 157/407 (38%), Positives = 195/407 (47%), Gaps = 13/407 (3%)
Frame = -3
Query: 1184 KHDASSGKRASDAIMK--SPHKHDTSSGKHASDARAFDRQNSDSLKGKVVLSGKALTENR 1011
+++ASS K + +K S K D SSGK SD+ + + QNS KGK V S KA T
Sbjct: 27 RNNASSKKNQLNKELKKVSSRKRDGSSGKCVSDSFSPNGQNSSLQKGKAVQSSKASTGKS 86
Query: 1010 SVASPKTSTSTAEKSKNSSECNLVTGIMEK---KPLKARAXXXXXXXXDKPLSARVSSFT 840
+ S K STS +K K S + N MEK KP DKPLS R+ + +
Sbjct: 87 TETSSKASTSITDKLKCSPQKNSSIDNMEKQLKKPCNEPYTDSVDSDDDKPLSIRLPT-S 145
Query: 839 ATVKKSNASHVSK-------EHITSEKGVLSIKKSCDDSEDEKPLXXXXXXXXXXXXXXX 681
A++ K +S VSK SEK ++ KKS +DSEDE PL
Sbjct: 146 ASLLKCKSSPVSKGLSSPVASSSQSEKTNVTNKKSSEDSEDELPLSLKLKLKPSVGLSGK 205
Query: 680 XXXXXXXXXXXXXXXXKQNGSGKGDPNCKQXXXXXXXXXXXXXXXXXXXXXXXXXXXKLL 501
QNGS K D + K+
Sbjct: 206 KFYDSGEEKPLVSKLQ-QNGSSKRD---NEPLKSPKNLNKRPLSGANSSGQSLVKKLKVS 261
Query: 500 AGSVPNKIKAEHEVKKEAKMDVANKIXXXXXXXXXXXXXXXXDHIPISQRVKKSVSSDNQ 321
SVP K+K + +K E K + + I PISQR+KKS SSD++
Sbjct: 262 EVSVPTKVK-QTSIKSEPKEEDEDDI-------------------PISQRLKKSASSDDK 301
Query: 320 SLS-KKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPP 144
SLS KK T K+PP SG GQKWTTL+HNGVIFPP
Sbjct: 302 SLSLKKTTKVVSSSFKKTTNKLKKAAKNSKYSKSTKMPPSSGEGQKWTTLEHNGVIFPPL 361
Query: 143 YKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFIDNFM 3
YKPHG+KMLYNG+PVDLTPEQEEVATMFAVMK+T+YATK +FI+NFM
Sbjct: 362 YKPHGVKMLYNGKPVDLTPEQEEVATMFAVMKDTDYATKSRFIENFM 408
>ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
Length = 883
Score = 197 bits (501), Expect = 2e-47
Identities = 150/407 (36%), Positives = 193/407 (47%), Gaps = 13/407 (3%)
Frame = -3
Query: 1184 KHDASSGKRASDAIMK--SPHKHDTSSGKHASDARAFDRQNSDSLKGKVVLSGKALTENR 1011
+++ +S K ++ +K S ++D SSGKH S + + + QNS KGK V K
Sbjct: 26 RNNTASRKNQVNSELKKASSQRNDGSSGKHVSGSLSPNGQNSSLQKGKAV--SKTSAGKP 83
Query: 1010 SVASPKTSTSTAEKSKNSSECNLVTGIMEK----KPLKARAXXXXXXXXDKPLSARVSSF 843
+ AS STS A+KS+ S + NL M+K KP DKPLS R+++
Sbjct: 84 TAASSNASTSIADKSRCSPQKNLAINNMQKQQLNKPCNGPKEDPDDSDDDKPLSFRLATS 143
Query: 842 TATVK-------KSNASHVSKEHITSEKGVLSIKKSCDDSEDEKPLXXXXXXXXXXXXXX 684
+++K K + S V + +K ++ KKS DSEDE PL
Sbjct: 144 GSSLKIKSQPGTKGHGSPVPSS-LQMDKTKITCKKSSADSEDEIPLSSKFQLKTNVGSSV 202
Query: 683 XXXXXXXXXXXXXXXXXKQNGSGKGDPNCKQXXXXXXXXXXXXXXXXXXXXXXXXXXXKL 504
QNGS K D +
Sbjct: 203 KKYDSDEEKPLIFKFQ--QNGSSKKDNELSKSLKSLNKRPMSDVNTSGQSLVKKPK---- 256
Query: 503 LAGSVPNKIKAEHEVKKEAKMDVANKIXXXXXXXXXXXXXXXXDHIPISQRVKKSVSSDN 324
L+ S+P K+K + +K E K D + +IPISQR+KKS SDN
Sbjct: 257 LSESIPAKVK-QAPIKSEPKEDDED-------------------NIPISQRLKKSAPSDN 296
Query: 323 QSLSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPP 144
+S S K T VPP SG GQKWTTL+HNGVIFPPP
Sbjct: 297 KSSSTKKTTTKVVSSSFKKTSKKLKKDKYSKSTK--VPPSSGEGQKWTTLEHNGVIFPPP 354
Query: 143 YKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFIDNFM 3
YKPHG+KMLYNGQPVDLTPEQEEVATMFAVMK+TEYATKQKF++NFM
Sbjct: 355 YKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKQKFVENFM 401
>ref|XP_009407901.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Musa acuminata
subsp. malaccensis] gi|695040634|ref|XP_009407902.1|
PREDICTED: DNA topoisomerase 1-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 951
Score = 164 bits (414), Expect = 2e-37
Identities = 88/164 (53%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Frame = -3
Query: 488 PNKIKAEHE--VKKEAKMDVANKIXXXXXXXXXXXXXXXXDHIPISQRVKKSVSSDNQSL 315
P +K +HE VKKE K D +++I PI+QR+KK+VSS++ S+
Sbjct: 318 PASVKVKHEIAVKKEIKADDSDQI-------------------PIAQRMKKTVSSNSTSV 358
Query: 314 SKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPPYKP 135
SK KVPPGSGGGQKWTTL+HNGVIFPPPYKP
Sbjct: 359 SKSVLHKTHSSFKTDGKKMKTNMKDFKYSKSLKVPPGSGGGQKWTTLEHNGVIFPPPYKP 418
Query: 134 HGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFIDNFM 3
HG+KMLYNGQPVDLTPEQEEVATMFAVMK+T+YATK++FI+NFM
Sbjct: 419 HGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKKQFIENFM 462
>ref|XP_009411876.1| PREDICTED: DNA topoisomerase 1-like [Musa acuminata subsp.
malaccensis] gi|695000465|ref|XP_009411883.1| PREDICTED:
DNA topoisomerase 1-like [Musa acuminata subsp.
malaccensis]
Length = 926
Score = 161 bits (408), Expect = 1e-36
Identities = 90/160 (56%), Positives = 102/160 (63%)
Frame = -3
Query: 482 KIKAEHEVKKEAKMDVANKIXXXXXXXXXXXXXXXXDHIPISQRVKKSVSSDNQSLSKKP 303
K+K E VKKE K D DHIPI+QR+KKSVSS++ S +K
Sbjct: 298 KVKNEVAVKKEVKED-------------------DNDHIPIAQRMKKSVSSNSTSTTKN- 337
Query: 302 TXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPPYKPHGIK 123
KVPPGSGGGQKWTTL+HNGVIFPPPYKPHG+K
Sbjct: 338 LLKKTSSFKKDSKQMKKKMKDSKFSKTLKVPPGSGGGQKWTTLEHNGVIFPPPYKPHGVK 397
Query: 122 MLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFIDNFM 3
MLYNGQPVDLTPEQEEVATMFAVMK+TEYATK++FI+NFM
Sbjct: 398 MLYNGQPVDLTPEQEEVATMFAVMKDTEYATKKQFIENFM 437
>ref|XP_008782916.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Phoenix
dactylifera]
Length = 950
Score = 157 bits (396), Expect = 3e-35
Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = -3
Query: 371 HIPISQRVKKSVSSDNQSLSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXK-VPPGSGG 195
HIPI+QR+KKS SSDN+S + K VPPGSGG
Sbjct: 338 HIPIAQRIKKSGSSDNKSSTNKVMKKITCSPFKKDSKKMKKAMKNSKFSKSLKVPPGSGG 397
Query: 194 GQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFI 15
GQKWTTL+HNGVIFPPPYKPHG++MLYNGQPVDLTPEQEEVATMFAVMK+T+YATK KFI
Sbjct: 398 GQKWTTLEHNGVIFPPPYKPHGVRMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFI 457
Query: 14 DNF 6
+NF
Sbjct: 458 ENF 460
Score = 69.7 bits (169), Expect = 6e-09
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 17/246 (6%)
Frame = -3
Query: 1412 DDDDGPVVFKRNITSSKNHQSKSALMNTSSHRHDGA-----SSRHATNNGXXXXXXDEPL 1248
DDDDGP VFKR+ ++SK Q SA ++S R D + S + TN G ++
Sbjct: 16 DDDDGPAVFKRSNSASKQKQLNSASKKSTSQRCDSSLGKLRSEKSVTNYGNSNFQKNKIT 75
Query: 1247 VFRRASKEKLLNSAAMKSPPHKHDASSGKRASDAIMKSPHKHDTSSGKHASDARAFDRQN 1068
+A+ EK S +M + + A K ++ + S K +DA + D +
Sbjct: 76 STVKAASEK---SESMVAGSNSRIADQSKHFAEHKLASNSKETAHLDNICADAESSDDSD 132
Query: 1067 SDS-LKGKVVLSGKALTENRSV----ASPKTSTSTAEKSKNSSECNLVTGIMEKKPLKAR 903
D L ++ + N S+ + K +TS+ +K CN +
Sbjct: 133 DDKPLSHRLNAASMVFHRNNSMHADSSEHKLATSSKDKMDLDKPCN-------------K 179
Query: 902 AXXXXXXXXDKPLSARVSSFTATVKKSNASHVSK-------EHITSEKGVLSIKKSCDDS 744
+ DKPLS++ SS + V+KS++SH K ++S+K K+ DDS
Sbjct: 180 SEDSDDSDDDKPLSSKFSS-SVVVEKSSSSHAKKVFESPRHTSLSSQKLKERTKEDSDDS 238
Query: 743 EDEKPL 726
ED++PL
Sbjct: 239 EDDEPL 244
>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like [Setaria italica]
Length = 903
Score = 156 bits (395), Expect = 4e-35
Identities = 146/492 (29%), Positives = 202/492 (41%), Gaps = 13/492 (2%)
Frame = -3
Query: 1442 INPNNFSMGD-DDDDGPVVFKRNITSSKNHQSKSALMNTSSHRHDGA-----SSRHATNN 1281
+N NN + D DDDDGP+ FKR+ S K+ + + SS GA S +H N
Sbjct: 4 VNTNNPVLFDNDDDDGPISFKRSSNSVKSSRPTPSKQEGSS---GGAGVPVRSQKHVAPN 60
Query: 1280 GXXXXXXDEPLVFRRASKEKLLNSAAMKSPPHKHDASSGKRASDAIMKSPHKHDTSSGKH 1101
++K SA++ P H S SP++ + SG+
Sbjct: 61 -----------------QQKNGVSASVSRPMHMKPPPS----------SPNQRPSGSGQP 93
Query: 1100 ASDARAFDRQNSDSLKGKVVLSGKALTENRSVASPKTSTSTAEKSKNSSECNLVTGIMEK 921
S A + NS+ + + P ++ S + L + EK
Sbjct: 94 NSSAAHSSKSNSN--------------DKSKLKRPLVKEENSDDSDDDVPIGLRKKVEEK 139
Query: 920 KPLKARAXXXXXXXXDKPLSARVSSFTATVKKSNASHVSKEHITSEKGVLSIKKSCDDSE 741
K LK DKPLS +++S K +++ S+ + +K V +++ +DS+
Sbjct: 140 K-LKRVDEKADDSDDDKPLSLKINS-----SKMSSNCASRPVL--QKAVAKVEQPDEDSD 191
Query: 740 DEKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQNGSGKGDPNCKQXXXXXXXXXX 561
D+KPL K +GSG N K
Sbjct: 192 DDKPLASRLPTNAAPKSGGNASEDSEDEKPLAARFSKVSGSG----NLKLTSSSKGLNND 247
Query: 560 XXXXXXXXXXXXXXXXXKLLA--GSVPNKIKAEHEVKKEAKMDVANKIXXXXXXXXXXXX 387
LA + P+ + A VK+E K D
Sbjct: 248 SNGPRNLGKRPLDNSNQTSLALKKAKPSNVSASASVKREIKAD----------------- 290
Query: 386 XXXXDHIPISQRVKKSVSSDNQS-----LSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXX 222
D+ P++QR+K SS + + K P
Sbjct: 291 --DNDNTPLAQRLKIGESSKGKPSAKNVVKKSPASMKKGIKKMKGKVKTKMMKNSQFSKT 348
Query: 221 XKVPPGSGGGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKET 42
KVPPGSGGG+KWTTL+HNGVIFPPPYKPHG+KMLYNGQPVDLTPEQEEVATMFAVMK+T
Sbjct: 349 MKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDT 408
Query: 41 EYATKQKFIDNF 6
+YA K FI+NF
Sbjct: 409 DYAGKPTFIENF 420
>ref|XP_008798752.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Phoenix
dactylifera]
Length = 948
Score = 154 bits (388), Expect = 3e-34
Identities = 77/123 (62%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = -3
Query: 371 HIPISQRVKKSVSSDNQSLSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXK-VPPGSGG 195
HIP++QR+KKS SSDN+S + K VPPGSGG
Sbjct: 342 HIPVAQRIKKSGSSDNKSSTNKVMKKITSSSFKKDGKKMKKALKGSKFSKSLNVPPGSGG 401
Query: 194 GQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFI 15
GQKWTTL+HNGVIFPPPYKPHG+KMLYNGQ VDLTPEQEEVATMFAVMK+T+YATK KFI
Sbjct: 402 GQKWTTLEHNGVIFPPPYKPHGVKMLYNGQLVDLTPEQEEVATMFAVMKDTDYATKPKFI 461
Query: 14 DNF 6
+NF
Sbjct: 462 ENF 464
>ref|XP_010913964.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Elaeis guineensis]
Length = 914
Score = 153 bits (387), Expect = 3e-34
Identities = 77/123 (62%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = -3
Query: 371 HIPISQRVKKSVSSDNQSLSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXK-VPPGSGG 195
HIPI+QR+KKS SSDN+S + K VPPGSGG
Sbjct: 345 HIPIAQRIKKSGSSDNKSSTNKVMKKITSSSFKKDGKKMKKAMKDSKFSKSLKVPPGSGG 404
Query: 194 GQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFI 15
GQKWTTL+HNGVIFPP Y+PHG+KMLYNGQPVDLTPEQEEVATMFAVMK+T+YATK KFI
Sbjct: 405 GQKWTTLEHNGVIFPPAYQPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFI 464
Query: 14 DNF 6
+NF
Sbjct: 465 ENF 467
>ref|XP_010913963.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Elaeis guineensis]
Length = 951
Score = 153 bits (387), Expect = 3e-34
Identities = 77/123 (62%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = -3
Query: 371 HIPISQRVKKSVSSDNQSLSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXK-VPPGSGG 195
HIPI+QR+KKS SSDN+S + K VPPGSGG
Sbjct: 345 HIPIAQRIKKSGSSDNKSSTNKVMKKITSSSFKKDGKKMKKAMKDSKFSKSLKVPPGSGG 404
Query: 194 GQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFI 15
GQKWTTL+HNGVIFPP Y+PHG+KMLYNGQPVDLTPEQEEVATMFAVMK+T+YATK KFI
Sbjct: 405 GQKWTTLEHNGVIFPPAYQPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFI 464
Query: 14 DNF 6
+NF
Sbjct: 465 ENF 467
>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
topoisomerase I [Zea mays]
Length = 904
Score = 152 bits (385), Expect = 6e-34
Identities = 135/498 (27%), Positives = 189/498 (37%), Gaps = 19/498 (3%)
Frame = -3
Query: 1442 INPNNFSMGDDDDDGPVVFKRNITSSKNHQSKSALMNTSSHRHDGASSRHATNNGXXXXX 1263
+NP N ++ DDDDD P+ FKR S+K + + +H G+S +
Sbjct: 4 VNPTNLAIDDDDDDTPISFKRTSNSTKTARPTPS-------KHAGSSGGNGAPVRIPKPV 56
Query: 1262 XDEPLVFRRASKEKLLNSAAMKSPPHKHDASSGKRASDAIMKSPHKHDTSSGKHASDARA 1083
P + L+ S P+ + SG+ S +H+S A +
Sbjct: 57 SPNPQKNGATGASRPLHMKPPSSSPNHRPSGSGQ-------------PNSLAQHSSKANS 103
Query: 1082 FDR----------QNSDSLKGKVVLSGKALTENRSVASPKTSTSTAEKSKNSSECNLVTG 933
D + SD +V + + E + + T + S +
Sbjct: 104 IDMSKLKRPLVKDERSDDSDDEVPIGLRRKVEEKKLKGVDTRVQKTDDSDD--------- 154
Query: 932 IMEKKPL--KARAXXXXXXXXDKPLSAR-VSSFTATVKKSNASHVSKEHITSEKGVLSIK 762
+ KPL K + +KP+ R V + S+ + S G S
Sbjct: 155 --DDKPLGLKINSSRMSSNRVNKPVLQRTVPKVEQPDEDSDDDKPLASRLPSNAGPKSGG 212
Query: 761 KSCDDSEDEKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQNGSGKGDPNCKQXXX 582
+DSEDEKPL +G G+P
Sbjct: 213 DVSEDSEDEKPLAARFSKV----------------------------AGSGNPKIASSSK 244
Query: 581 XXXXXXXXXXXXXXXXXXXXXXXXKLLAGSVPNKIKAEHEVKKEAKMDVANKIXXXXXXX 402
L + P+ + A V++E K D
Sbjct: 245 GLTSDTNGQQSLGKRPLDSSNQTSSALKKAKPSNVSASAIVRREIKTD------------ 292
Query: 401 XXXXXXXXXDHIPISQRVKKSVSSDNQSLSKKP------TXXXXXXXXXXXXXXXXXXXX 240
D+ P++QR+K SS +S +K +
Sbjct: 293 ---------DNTPLAQRLKMGESSKGKSSAKSVFKKSPVSVKKDIKKMKGKGKLKKNMKN 343
Query: 239 XXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMF 60
KVPPGSGGG+KWTTL+HNGVIFPPPYKPHG+KMLYNG+PVDLTPEQEEVATMF
Sbjct: 344 SQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPVDLTPEQEEVATMF 403
Query: 59 AVMKETEYATKQKFIDNF 6
AVMK+T+YA K FIDNF
Sbjct: 404 AVMKDTDYAAKPTFIDNF 421
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Vitis vinifera]
gi|731409405|ref|XP_010657183.1| PREDICTED: DNA
topoisomerase 1-like isoform X1 [Vitis vinifera]
gi|731409407|ref|XP_010657184.1| PREDICTED: DNA
topoisomerase 1-like isoform X1 [Vitis vinifera]
Length = 883
Score = 149 bits (376), Expect = 6e-33
Identities = 87/169 (51%), Positives = 101/169 (59%), Gaps = 1/169 (0%)
Frame = -3
Query: 506 LLAGSVPNKIKAEHEVKKEAKMDVANKIXXXXXXXXXXXXXXXXDHIPISQRVKKSVSSD 327
LL GSV K+K + VK E K D ++ P +R+KKSVSSD
Sbjct: 246 LLDGSVKGKVK-QVSVKAEQKDD------------DDDDNDDDDEYTPTVKRLKKSVSSD 292
Query: 326 NQSLSK-KPTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGGGQKWTTLQHNGVIFP 150
N+ SK K KVPP SG GQKWTTL+HNGVIFP
Sbjct: 293 NKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFP 352
Query: 149 PPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFIDNFM 3
PPYKPHG+KMLYNG+PVDLTPEQEEVATMFAVMK+T+YATK +FI+NFM
Sbjct: 353 PPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFM 401
>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
gi|241940222|gb|EES13367.1| hypothetical protein
SORBIDRAFT_07g003610 [Sorghum bicolor]
Length = 921
Score = 148 bits (373), Expect = 1e-32
Identities = 141/494 (28%), Positives = 196/494 (39%), Gaps = 15/494 (3%)
Frame = -3
Query: 1442 INP-NNFSMGDDDDDGPVVFKRNITSSKNHQSKSALMNTSSH--RHDGASSRHATNNGXX 1272
+NP NN +M DDDDD P+ FKR S K + + SS S + ++ G
Sbjct: 4 VNPSNNPAMFDDDDDVPLSFKRTSNSLKTARPTPSKQEGSSGGAARPTPSKQEGSSGGSG 63
Query: 1271 XXXXDEPLVFRRASK-----EKLLNSAAMKSPPHKHDASSGKRASDAIMKSPHKHDTSSG 1107
+P+ + ++ + S P+ + SG+ S A S K + S
Sbjct: 64 NPARPKPVAHNLQKNGVTGASRPVHMKPLSSTPNHRPSGSGQPNSSAQHSS--KGNNSID 121
Query: 1106 KHASDARAFDRQNSDSLKGKVVLSGKALTENRSVASPKTSTSTAEKSKNSSECNLVTGIM 927
K + SD +V + + E + + T+ A+ S +
Sbjct: 122 KSKLKRPLVKDERSDDSDDEVPIGLRRKAEEKKLKRVDTAVHKADDSDDDD--------- 172
Query: 926 EKKPLKARAXXXXXXXXDKPLSARVSSFTATVKKSNASHVSKEHITSEKGVLSIKKSCDD 747
KPLS +++S K SN S VSK + ++ +++ +D
Sbjct: 173 ------------------KPLSLKINSS----KMSNNS-VSKPVL--QRIAPKVEQPDED 207
Query: 746 SEDEKPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQNGSGKGDPNCKQXXXXXXXX 567
S+D+KPL K GSG N K
Sbjct: 208 SDDDKPLASRLPNNACPKSGGNVSEDSEDEKPLAARFSKVAGSG----NLKTASSSKGLN 263
Query: 566 XXXXXXXXXXXXXXXXXXXKLLA--GSVPNKIKAEHEVKKEAKMDVANKIXXXXXXXXXX 393
LA + P+ + A VK+E K D
Sbjct: 264 SDTNGQRSLGKRPLDNSNQTSLAIKKAKPSNVSASASVKREIKTD--------------- 308
Query: 392 XXXXXXDHIPISQRVKKSVSSDNQS-----LSKKPTXXXXXXXXXXXXXXXXXXXXXXXX 228
D+ P++QR+K SS + + K P
Sbjct: 309 ----DNDNTPLAQRLKMGESSKGKPPAKSIVKKSPASAKDIKKLKGKGKLKKNMKNSQFS 364
Query: 227 XXXKVPPGSGGGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMK 48
+VPPGSG G+KWTTL+HNGVIFPPPYKPHG+KMLYNGQPVDLTPEQEEVATMFAVMK
Sbjct: 365 KTMRVPPGSGEGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMK 424
Query: 47 ETEYATKQKFIDNF 6
+T+YA K FIDNF
Sbjct: 425 DTDYAGKPTFIDNF 438
>ref|XP_006857525.2| PREDICTED: DNA topoisomerase 1 [Amborella trichopoda]
Length = 666
Score = 147 bits (372), Expect = 2e-32
Identities = 76/125 (60%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Frame = -3
Query: 368 IPISQRVKKSVSSDNQSLSKK---PTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSG 198
+PISQR+KKS S Q+ +KK T K PPGSG
Sbjct: 299 LPISQRMKKSASVSGQASAKKISVKTKVVSSSFKKTGKNTKKEIKKLKQSKSAKGPPGSG 358
Query: 197 GGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKF 18
GQKWTTL+HNGVIFPPPYKPHG+KMLYNG PVDLTPEQEEVATMFAVMK+TEYATK KF
Sbjct: 359 DGQKWTTLEHNGVIFPPPYKPHGVKMLYNGLPVDLTPEQEEVATMFAVMKDTEYATKPKF 418
Query: 17 IDNFM 3
++NFM
Sbjct: 419 VENFM 423
>gb|ERN18992.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella
trichopoda]
Length = 595
Score = 147 bits (372), Expect = 2e-32
Identities = 76/125 (60%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Frame = -3
Query: 368 IPISQRVKKSVSSDNQSLSKK---PTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSG 198
+PISQR+KKS S Q+ +KK T K PPGSG
Sbjct: 299 LPISQRMKKSASVSGQASAKKISVKTKVVSSSFKKTGKNTKKEIKKLKQSKSAKGPPGSG 358
Query: 197 GGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKF 18
GQKWTTL+HNGVIFPPPYKPHG+KMLYNG PVDLTPEQEEVATMFAVMK+TEYATK KF
Sbjct: 359 DGQKWTTLEHNGVIFPPPYKPHGVKMLYNGLPVDLTPEQEEVATMFAVMKDTEYATKPKF 418
Query: 17 IDNFM 3
++NFM
Sbjct: 419 VENFM 423
>ref|XP_010928876.1| PREDICTED: DNA topoisomerase 1-like [Elaeis guineensis]
Length = 956
Score = 147 bits (371), Expect = 2e-32
Identities = 75/122 (61%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Frame = -3
Query: 368 IPISQRVKKSVSSDNQSLSKKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXK-VPPGSGGG 192
IPISQR+KKS SSD++S + K VPPGSGGG
Sbjct: 345 IPISQRIKKSGSSDSKSSTNKVMKKITGSLLKKDSKKMKKALKNSKFSKSLKVPPGSGGG 404
Query: 191 QKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFID 12
QKWTTL+HNG+IFPP Y PHG+KMLYNGQPVDLTPEQEEVATMFAVMK+T+YATK KFI+
Sbjct: 405 QKWTTLEHNGLIFPPTYVPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFIE 464
Query: 11 NF 6
NF
Sbjct: 465 NF 466
Score = 65.9 bits (159), Expect = 9e-08
Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 24/269 (8%)
Frame = -3
Query: 1460 IAFYGFINPNNFSMGDDDDDGPVVFKRNITSSKNHQSKSALMNTSSHRHDGA-----SSR 1296
+A +G + + GDDDD GP VFKR ++SK Q SAL + S R D + S +
Sbjct: 1 MAVHGCVKQVIYDNGDDDD-GPTVFKRPNSASKQSQLNSALKKSVSQRCDSSLGKLTSEK 59
Query: 1295 HATNNGXXXXXXDEPLVFRRASKEKLLNSAAMKSPPHKHD---ASSGKRAS--DAIMKSP 1131
A N+G ++ +K ++ +K+P K A S R + D P
Sbjct: 60 SAMNHG-------------NSNFQKNKITSTVKAPSEKSKSIIAGSNSRIALPDRSKHLP 106
Query: 1130 HKHDTSSGKHAS--DARAFDRQNSDSLKGKVVLSGKALTENRSVASPKTSTSTAEKSKN- 960
K TS+ + D D ++SD LS + S+ K ++ EK N
Sbjct: 107 EKKPTSNSRETMHLDNICADAESSDDSDDDKPLSHR--LNAASMVFQKNNSMHPEKVVNH 164
Query: 959 SSECNLVTGIMEK----KPLKARAXXXXXXXXDKPLSARVSSFTATVKKSNASHVSK--- 801
SSE L T +K KP + R DKPLS++ SS + V+K+++ H K
Sbjct: 165 SSEHKLATSSKDKMDLDKPCRKR-EDSDDSDDDKPLSSKFSS--SVVEKNSSLHSKKVLE 221
Query: 800 --EHI--TSEKGVLSIKKSCDDSEDEKPL 726
H +++K S K+ DDSED+KPL
Sbjct: 222 SPRHASPSAQKVQESTKEDSDDSEDDKPL 250
>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
Length = 911
Score = 142 bits (359), Expect = 6e-31
Identities = 80/163 (49%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Frame = -3
Query: 488 PNKIKAEHEVKKEAKMDVANKIXXXXXXXXXXXXXXXXDHIPISQRVKKSVSSDNQSLSK 309
P+ + VK+E+K D D+IP+SQR+K SS ++ +K
Sbjct: 285 PSDVSVSASVKRESKAD-------------------DNDNIPLSQRLKMGESSKSKPPAK 325
Query: 308 K--PTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGGGQKWTTLQHNGVIFPPPYKP 135
KVPPGSGGGQKWTTL HNGVIFPPPYKP
Sbjct: 326 NIVKKNPSSFKKDSKKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHNGVIFPPPYKP 385
Query: 134 HGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFIDNF 6
HG+KMLYNGQPVDLTPEQEEVATMF+VMK+T+YA+KQ FIDNF
Sbjct: 386 HGVKMLYNGQPVDLTPEQEEVATMFSVMKDTDYASKQTFIDNF 428
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 142 bits (358), Expect = 8e-31
Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 2/124 (1%)
Frame = -3
Query: 368 IPISQRVK-KSVSSDNQSLSK-KPTXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPPGSGG 195
IP+S + + K+VSSDN+ SK K KVPP SG
Sbjct: 119 IPLSSKFRLKTVSSDNKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGE 178
Query: 194 GQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEYATKQKFI 15
GQKWTTL+HNGVIFPPPYKPHG+KMLYNG+PVDLTPEQEEVATMFAVMK+T+YATK +FI
Sbjct: 179 GQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFI 238
Query: 14 DNFM 3
+NFM
Sbjct: 239 ENFM 242
>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
[Oryza sativa Japonica Group]
gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
protein OsJ_26075 [Oryza sativa Japonica Group]
Length = 916
Score = 141 bits (356), Expect = 1e-30
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = -3
Query: 215 VPPGSGGGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEY 36
VPPGSGGGQKWTTL H+GVIFPPPYKPHG+KMLYNGQPVDLTPEQEEVATMFAVMK+T+Y
Sbjct: 364 VPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDY 423
Query: 35 ATKQKFIDNF 6
A+KQ FIDNF
Sbjct: 424 ASKQTFIDNF 433
>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
Length = 916
Score = 140 bits (352), Expect = 4e-30
Identities = 62/70 (88%), Positives = 68/70 (97%)
Frame = -3
Query: 215 VPPGSGGGQKWTTLQHNGVIFPPPYKPHGIKMLYNGQPVDLTPEQEEVATMFAVMKETEY 36
VPPGSGGGQKWTTL H+GVIFPPPYKPHG+K+LYNGQPVDLTPEQEEVATMFAVMK+T+Y
Sbjct: 364 VPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKILYNGQPVDLTPEQEEVATMFAVMKDTDY 423
Query: 35 ATKQKFIDNF 6
A+KQ FIDNF
Sbjct: 424 ASKQTFIDNF 433