BLASTX nr result

ID: Cinnamomum25_contig00006168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00006168
         (222 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010936796.1| PREDICTED: LOW QUALITY PROTEIN: putative nuc...    61   3e-07
ref|XP_008782406.1| PREDICTED: putative nuclear matrix constitue...    60   4e-07
ref|XP_004297151.1| PREDICTED: putative nuclear matrix constitue...    59   2e-06

>ref|XP_010936796.1| PREDICTED: LOW QUALITY PROTEIN: putative nuclear matrix constituent
            protein 1-like protein [Elaeis guineensis]
          Length = 1256

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/67 (50%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = -1

Query: 222  PPKRKYSRRKPVKKSRLKSTP---SVKQVIEDAKVFLGETSEPNKDGQPNAAARDPAQTN 52
            P   K  RR P +K R K+T    SVK V+EDAK  LGETSE   DG PN   RD     
Sbjct: 966  PEPLKQRRRLPNRKGRPKATRRTRSVKAVVEDAKAILGETSEEKNDGPPNGVTRDSLNIQ 1025

Query: 51   QGSQGDS 31
            + SQGDS
Sbjct: 1026 EESQGDS 1032


>ref|XP_008782406.1| PREDICTED: putative nuclear matrix constituent protein 1-like protein
            [Phoenix dactylifera]
          Length = 1132

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 34/73 (46%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
 Frame = -1

Query: 222  PPKRKYSRRKPVKKSRLKS---TPSVKQVIEDAKVFLGETSEPNKDGQPNAAARDPAQTN 52
            P   K  RR P +K R K+   T SVK V+EDAK  LGETSE   DG PN   +D     
Sbjct: 966  PEPSKQRRRLPGRKGRPKAIRRTRSVKAVVEDAKAILGETSEEKNDGPPNGVTKDSLNIQ 1025

Query: 51   QGSQGDSHTTNIG 13
            + SQGDS   + G
Sbjct: 1026 EESQGDSVHADTG 1038


>ref|XP_004297151.1| PREDICTED: putative nuclear matrix constituent protein 1-like protein
            [Fragaria vesca subsp. vesca]
          Length = 1148

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = -1

Query: 210  KYSRRKPVK--KSRLKSTPSVKQVIEDAKVFLGETSEPNKDGQPNAAARDPAQTNQGSQG 37
            K  RRKP +  KSRL  T SVK V+EDAK FLGET EP+     N       +++  ++G
Sbjct: 907  KSGRRKPARGRKSRLSRTHSVKAVVEDAKKFLGETPEPSNASLLN-------ESSYINEG 959

Query: 36   DSHTTNIGKKRP 1
            DS  T+IG+KRP
Sbjct: 960  DSSFTSIGRKRP 971


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