BLASTX nr result
ID: Cinnamomum25_contig00005597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00005597
(4041 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme... 1698 0.0
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1697 0.0
ref|XP_009389500.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1643 0.0
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 1632 0.0
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1628 0.0
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 1627 0.0
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 1625 0.0
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1618 0.0
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1615 0.0
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1613 0.0
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 1605 0.0
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P... 1596 0.0
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 1594 0.0
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 1593 0.0
ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 is... 1593 0.0
ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 is... 1592 0.0
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1585 0.0
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1584 0.0
gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sin... 1583 0.0
ref|XP_010048973.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1570 0.0
>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
Length = 1198
Score = 1698 bits (4398), Expect = 0.0
Identities = 830/1202 (69%), Positives = 984/1202 (81%), Gaps = 2/1202 (0%)
Frame = -2
Query: 3743 MGSEGTLQ-EAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYP 3567
MGS G + + KE+VV+Q SFGGFD +VSAKDL +F+E E GL+WRCR+K SWTPPESYP
Sbjct: 1 MGSLGAQERDQKELVVSQVSFGGFDERVSAKDLTDFMEHEAGLIWRCRVKNSWTPPESYP 60
Query: 3566 DYTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTES 3387
++ V + S V R +++ KVVPHAFVHF A +CELI+ G PL+AN +S
Sbjct: 61 NFNVLDVSDVLRKDDHPKVVPHAFVHFATPDAAKRAINAAGKCELILNGHPLRANSGIDS 120
Query: 3386 SLRVNRRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
S R+NRRR T+PF+F DV EIGTL +RDEF V WKGP GVDF++DPFD C+ILF+ E
Sbjct: 121 SFRINRRRTTDPFRFVDVGVEIGTLASRDEFLVAWKGPKLGVDFLIDPFDGCCRILFSKE 180
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAF+FK K +VIKCDFKVEFLVRDI E+KL+ +R +P VYYRTADD+I
Sbjct: 181 TAFAFKDIKEMAVIKCDFKVEFLVRDINEVKLFTDRYPHVMLFQLSSTPWVYYRTADDDI 240
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
H T F+LLDDEDPWIRTTDF+ GAI R ++YR+S SPR+G LE++LAYLR+RRI EH
Sbjct: 241 HVTASFSLLDDEDPWIRTTDFTPGGAISRSSSYRVSFSPRYGRILEKSLAYLRERRIAEH 300
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
P+R L V++EPEFG + D FFS+ YKEG++F I+FLV+AL+H+GIVNQ+QLSEEFF L
Sbjct: 301 WPKRPLAVREEPEFGTLMPDPFFSVQYKEGISFSIMFLVDALVHKGIVNQHQLSEEFFAL 360
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LR+++ VN ALRH+ +YK PIFD KRLKLVQ+WLLKNPKLLKS+++ +D+ EVRRLV
Sbjct: 361 LRSQSDAVNEIALRHIWAYKTPIFDPRKRLKLVQDWLLKNPKLLKSSKLLDDSTEVRRLV 420
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKAYCLPP VELSNRVLR YK+V DRFLRVTFMDEGMQ LN+++L YY A IVK++T
Sbjct: 421 ITPTKAYCLPPEVELSNRVLRNYKKVADRFLRVTFMDEGMQPLNNNVLNYYVAPIVKELT 480
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
S+S PQKTT+F+RV++I DGF+LCGR+YSFLAFSSNQLRD SAWFFA+D+N + + +
Sbjct: 481 SNSFPQKTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVM---A 537
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
IR+WMG+F K VAKCAARMGQCFSSTYATVDVP Q +P LPDI+RN YVFSDGIGKI
Sbjct: 538 IRNWMGKFANKNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYVFSDGIGKII 597
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
P+LA+EVA+KLQLT NPP AYQIRYAG KGVV WP D G RL LRPSM KF S HT+L
Sbjct: 598 PELAIEVAEKLQLTENPPSAYQIRYAGFKGVVAVWPADDDGVRLSLRPSMNKFESSHTML 657
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
EVVSWTRFQPGFLNRQI+TLLS+L V D VF MQ+SM+ KLNQ+L +TDVAF+VLT+SC
Sbjct: 658 EVVSWTRFQPGFLNRQIVTLLSSLNVADSVFESMQDSMIYKLNQMLVDTDVAFDVLTSSC 717
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
+EQGN+AAIMLSAGFKPQ EPHL+ MLSCIRSAQL DL AK RIFVP GRWLMGCLDELG
Sbjct: 718 AEQGNTAAIMLSAGFKPQMEPHLKAMLSCIRSAQLGDLLAKARIFVPKGRWLMGCLDELG 777
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFS-WTKNVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LEHGQCFIQ+S+PSLENCF KHGSRFS KN +VI G V IAKNPCLHPGDIRIL+AV
Sbjct: 778 VLEHGQCFIQSSIPSLENCFMKHGSRFSLLKKNRQVIVGTVAIAKNPCLHPGDIRILEAV 837
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
DVP LHHLVDCLVFPQKGDRPH +EASGSDLDGDLYFVTWDENL+PPSK+SW PMDY PA
Sbjct: 838 DVPSLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWIPMDYTPA 897
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
K + VT +DII+FF KNMV ENLGVICNAHVVHAD SE GALDE CL+LAELAA A
Sbjct: 898 EPKLQPRAVTPRDIIDFFLKNMVNENLGVICNAHVVHADRSEYGALDENCLQLAELAATA 957
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEGSEEVT 690
VDFPKTGK TMP LKPK+YPDFMGKD+ SYKS+KVLG+LYR I + DN+ S E+
Sbjct: 958 VDFPKTGKLVTMPSGLKPKVYPDFMGKDDHMSYKSQKVLGRLYRN-IKYAADNDVSTELP 1016
Query: 689 YLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPK 510
E++PYDTDL+IPG+ Y++ADAW +KC+YDGQLNALL Y+V +E E VTGH+WS+PK
Sbjct: 1017 CTAEELPYDTDLDIPGASYYLADAWQNKCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPK 1076
Query: 509 YNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYH 330
YNSRK G+LKE+LK+AY+ALH+EFR FE MGPDF+ LTDDEK++ YEQ+ASAWY VTYH
Sbjct: 1077 YNSRKQGELKERLKNAYSALHKEFRRIFEDMGPDFQQLTDDEKSVSYEQRASAWYQVTYH 1136
Query: 329 PRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLAD 150
PRW+K+S ++ EP+GD VP RLSFAW+A DYLVRIKI Q +KFD +PID+LA YL++
Sbjct: 1137 PRWIKRSGEIKEPDGDVVPARLSFAWVAADYLVRIKISSQDRQKFDNSRPIDTLACYLSE 1196
Query: 149 KI 144
+I
Sbjct: 1197 RI 1198
>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Phoenix dactylifera]
Length = 1198
Score = 1697 bits (4394), Expect = 0.0
Identities = 831/1202 (69%), Positives = 982/1202 (81%), Gaps = 2/1202 (0%)
Frame = -2
Query: 3743 MGSEGTLQ-EAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYP 3567
MGS G + + KE+VV+Q SFGGFD +VSAKDL +FLE E GL+WRCR+K SWTPPESYP
Sbjct: 1 MGSLGADERDQKELVVSQVSFGGFDERVSAKDLTDFLEHEAGLIWRCRVKNSWTPPESYP 60
Query: 3566 DYTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTES 3387
DY V + S V R ++Y KVVPHAFVHF A +CEL+++GCPL+AN T+S
Sbjct: 61 DYDVLDVSDVRRKDDYPKVVPHAFVHFATLDAAKRAINAAGKCELVLQGCPLRANSGTDS 120
Query: 3386 SLRVNRRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
S R++RRR +PF+F+DV EIGTL +RDEF V WKGP SGVDF++DPFD C+ILF+ E
Sbjct: 121 SFRISRRRTMDPFRFTDVGVEIGTLASRDEFLVAWKGPKSGVDFLIDPFDGRCRILFSKE 180
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAF+FK K +V+KCDFKVEFL RDI E+KL+ ++ P +P VYYRTADD+I
Sbjct: 181 TAFAFKDIKEMAVLKCDFKVEFLARDINEVKLFTDQYPPAMLFQLASTPWVYYRTADDDI 240
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
T PF+LLDDEDPWIRTTDF+ GAI RC +YRIS SPR+G L+ +LAYL++RRI EH
Sbjct: 241 LVTAPFSLLDDEDPWIRTTDFTPGGAISRCCSYRISFSPRYGRILKESLAYLKERRIAEH 300
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
RP+R LVV +EP+FG + D FFS+ +KEG++F I+FLV+AL+H+GIVNQ+QLSEEFF L
Sbjct: 301 RPKRPLVVLEEPDFGTLMPDPFFSVQHKEGISFSIMFLVDALVHKGIVNQHQLSEEFFAL 360
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LR+++ +N TALRH+ +YK PIFDA +RLKLVQ+WLLKNPK LKS+++S+D+ EVRRLV
Sbjct: 361 LRSQSDSMNETALRHIWAYKTPIFDACRRLKLVQDWLLKNPKFLKSSKLSDDSSEVRRLV 420
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKAYCLPP VELSNRVLR YKEV DRFLRVTFMDEGMQ+LN+++L YY A IVK++T
Sbjct: 421 ITPTKAYCLPPGVELSNRVLRNYKEVADRFLRVTFMDEGMQKLNNNVLNYYVAPIVKELT 480
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
S+S PQKTT+F+RV+SI DGF+LCGR+YSFLAFSSNQLRD SAWFFA+D+N +
Sbjct: 481 SNSFPQKTTVFRRVRSILIDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSN---TSVED 537
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
IR WMG+F K VAKCAARMGQCFSSTYATVDVP QV+P LPDI+R Y+FSDGIGKIT
Sbjct: 538 IRDWMGKFANKNVAKCAARMGQCFSSTYATVDVPPDQVNPLLPDIERKGYIFSDGIGKIT 597
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
P+LA+EVA+KLQLT NPP AYQIRYAG KGVV WPG D G RL LRPSM KF S HT+L
Sbjct: 598 PELAMEVAEKLQLTENPPSAYQIRYAGTKGVVAVWPGDDDGIRLSLRPSMNKFESSHTML 657
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
EVVSWTRFQPGFLNRQI+TLLS+L VPD VF MQ+SM+ KLNQ+L +TDVAF+VLT+SC
Sbjct: 658 EVVSWTRFQPGFLNRQIVTLLSSLNVPDSVFASMQDSMIYKLNQMLVDTDVAFDVLTSSC 717
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
+EQGN+AAIMLSAGFKPQTEPHL+ MLSCIRSAQL DL AK R FVP GRWLMGCLDELG
Sbjct: 718 AEQGNTAAIMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLAKARXFVPKGRWLMGCLDELG 777
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFSW-TKNVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LEHGQCFIQ+S+PSLENCF KHGSRFS KN +VI G V IAKNPCLHPGDIRIL+AV
Sbjct: 778 VLEHGQCFIQSSIPSLENCFMKHGSRFSGIKKNRQVIVGTVAIAKNPCLHPGDIRILEAV 837
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
DVP LHHLVDCLVFPQKGDRPH +EASGSDLDGDLYFVTWDENL+PP K+SW PMDY PA
Sbjct: 838 DVPSLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPGKKSWIPMDYTPA 897
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
K + VT +DII+FF KNMV ENLGVICNAHVVHAD SE GALDEKCL+LAELAA A
Sbjct: 898 KPKLEPRGVTPRDIIDFFLKNMVNENLGVICNAHVVHADCSEYGALDEKCLQLAELAATA 957
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEGSEEVT 690
VDFPKTGK MP +LKPK+YPDFMGKD+ SY+S+KVLG LYR I D DN+ S E+
Sbjct: 958 VDFPKTGKLVMMPPALKPKVYPDFMGKDDHMSYQSQKVLGILYRNIKD-ATDNDVSSELL 1016
Query: 689 YLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPK 510
E++PYD DL+IPG+ ++ADAW +C+YDGQLNALL Y+V +E E VTGH+WS+PK
Sbjct: 1017 CTAEELPYDADLDIPGASDYLADAWXKQCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPK 1076
Query: 509 YNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYH 330
YNSRK G+LKE+L++AY+ALH+EFR FE MGPDF+ LTDDEK L YEQKASAWY VTY
Sbjct: 1077 YNSRKQGELKERLRNAYSALHKEFRRIFENMGPDFQQLTDDEKCLSYEQKASAWYQVTYQ 1136
Query: 329 PRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLAD 150
PRW+KK ++ E +GD VP RLSFAWIA DYLVRIKIR +FD +PID+LA YL++
Sbjct: 1137 PRWIKKLSEIEEADGDAVPARLSFAWIAADYLVRIKIRSGDRGRFDNKRPIDTLACYLSE 1196
Query: 149 KI 144
+I
Sbjct: 1197 RI 1198
>ref|XP_009389500.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Musa acuminata subsp. malaccensis]
Length = 1199
Score = 1643 bits (4254), Expect = 0.0
Identities = 810/1194 (67%), Positives = 968/1194 (81%), Gaps = 2/1194 (0%)
Frame = -2
Query: 3719 EAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTSL 3540
E KE+ V+Q SFGGFD +VSAK+L +FLE E G++WRCR+KTSWTPPESYP + ++ +
Sbjct: 9 EQKEMTVSQVSFGGFDAKVSAKELADFLEYEAGIIWRCRVKTSWTPPESYPVFKGTDDAF 68
Query: 3539 -VHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVNRRR 3363
V R ++Y +VVPHAFVHF A +C+L++ G PL+AN+ TESS RVNRRR
Sbjct: 69 DVPRKDDYGRVVPHAFVHFARPDAVKKAMDAAGKCDLVLNGRPLRANVGTESSFRVNRRR 128
Query: 3362 VTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKST 3183
T+PF+FS+ EIG L +RDEF V WKGP+S VDFV+DPFD CKILF+ ETAF FK
Sbjct: 129 TTDPFRFSNACVEIGNLVSRDEFLVSWKGPDSAVDFVIDPFDDCCKILFSKETAFYFKGL 188
Query: 3182 KRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFNL 3003
+ ++I CDFKVEFL+RDI E++++K+ A +P VYYRTADD+I+ +VPFNL
Sbjct: 189 REMTLIMCDFKVEFLLRDINEVRVHKDAAPFVMQFQLISAPYVYYRTADDDIYTSVPFNL 248
Query: 3002 LDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLVV 2823
LDDEDPWIRTTD + SGAIGRCN+YRIS+SPRFG K+ER+LAYLR+ + E+RPR +LVV
Sbjct: 249 LDDEDPWIRTTDITPSGAIGRCNSYRISLSPRFGPKMERSLAYLREHGVAENRPRCRLVV 308
Query: 2822 QDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAEV 2643
+DEP +GA + D FF I K+G+NF +FLVNAL+HRGIVNQ+QLSEEFF LLR ++ V
Sbjct: 309 RDEPGYGAHMSDPFFCIQNKKGINFATMFLVNALVHRGIVNQHQLSEEFFSLLRCQSEMV 368
Query: 2642 NVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAYC 2463
N TAL H+ SYKHPIFDA RLKLVQEWLL+NPKLL+ ++ S+D +EVR+LVITPTKAYC
Sbjct: 369 NGTALMHILSYKHPIFDAPGRLKLVQEWLLRNPKLLRHSKFSDDIIEVRKLVITPTKAYC 428
Query: 2462 LPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQKT 2283
LPP VELSNRVLRKYKEV DRFLRVTF DEGMQQLNS++L YY A IV+DITS+S PQKT
Sbjct: 429 LPPEVELSNRVLRKYKEVADRFLRVTFTDEGMQQLNSNVLNYYVAPIVRDITSNSFPQKT 488
Query: 2282 TIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGRF 2103
T+FKRVK I +GF+L G+KYSFLAFSSNQLRD SAWFFA+ + +T +IR+WMG+F
Sbjct: 489 TVFKRVKDILTNGFHLYGQKYSFLAFSSNQLRDRSAWFFAEVSG--SITVATIRNWMGKF 546
Query: 2102 NIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEVA 1923
+ K VAKCAARMGQCFSSTYATV+V +V+ +L DIKRN YVFSDGIGKITP+LALEVA
Sbjct: 547 SNKNVAKCAARMGQCFSSTYATVNVTPNEVNSELEDIKRNGYVFSDGIGKITPELALEVA 606
Query: 1922 QKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTRF 1743
QKL LT +PP AYQIRYAGCKGVV WPG+D G +L LRPSM KF S+HTILEVVSWTRF
Sbjct: 607 QKLHLTEDPPSAYQIRYAGCKGVVAVWPGNDDGIKLSLRPSMNKFESNHTILEVVSWTRF 666
Query: 1742 QPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSAA 1563
QPGFLNRQI+TLLS+L VPD VF +MQ++M+ KLNQIL +T+VAFE+LTTSC+EQGN+AA
Sbjct: 667 QPGFLNRQIVTLLSSLKVPDSVFERMQDTMILKLNQILHDTNVAFEILTTSCAEQGNTAA 726
Query: 1562 IMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQCF 1383
+MLSAGF+PQ+EPHL+ MLSCIRS QL DL AKT+IFVP GR LMGCLDELG LEHGQCF
Sbjct: 727 MMLSAGFRPQSEPHLKAMLSCIRSTQLGDLLAKTKIFVPKGRLLMGCLDELGVLEHGQCF 786
Query: 1382 IQTSLPSLENCFAKHGSRFSWTKNVK-VITGKVIIAKNPCLHPGDIRILDAVDVPGLHHL 1206
IQ S PSLENC +KHGSRFS ++N + VI G V + KNPCLHPGDIRIL+AVDVP LHHL
Sbjct: 787 IQASTPSLENCLSKHGSRFSASQNNRQVIVGTVAVGKNPCLHPGDIRILEAVDVPELHHL 846
Query: 1205 VDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKKP 1026
VDCL+FPQ+GDRPHT+EASGSDLDGDLYFVTWDENL+PP K+SW PMDY PA VK+ +
Sbjct: 847 VDCLIFPQRGDRPHTNEASGSDLDGDLYFVTWDENLLPPGKKSWVPMDYTPAEVKQFPRQ 906
Query: 1025 VTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTGK 846
+ QDII+F+ KNMV EN GVICNAHVVHAD SE GALDE CL+LAELAA AVDFPKTGK
Sbjct: 907 ILPQDIIDFYLKNMVNENHGVICNAHVVHADRSEHGALDENCLKLAELAATAVDFPKTGK 966
Query: 845 SATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEGSEEVTYLPEDVPY 666
TMP +LKPK YPDFMGK + SYKS+K+LG+LYRKI D D+E E+ ED+PY
Sbjct: 967 IVTMPPALKPKTYPDFMGKVDRLSYKSEKILGKLYRKIKD-ATDDELPSELPCTFEDLPY 1025
Query: 665 DTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKLGD 486
DTDLEI GS ++ADAW +K YD LNALL Y+VS+E E VTGH+WS+PKYNSRK G+
Sbjct: 1026 DTDLEIIGSLDYLADAWQNKVVYDRHLNALLAQYRVSSEGEVVTGHIWSLPKYNSRKQGE 1085
Query: 485 LKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKKSV 306
LKE+LK+AY++L ++FRH F+ M PD LTDDEK YE KASAWY VTYHPRWVKK
Sbjct: 1086 LKERLKNAYSSLRKQFRHIFKTMSPDLLQLTDDEKCFFYEMKASAWYQVTYHPRWVKKYN 1145
Query: 305 QLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
+L EP+GDGVP RLSFAWIA DYLVRIK+R + + T +PIDS A+YL+ ++
Sbjct: 1146 ELKEPDGDGVPARLSFAWIAADYLVRIKVRARRGEHQITKRPIDSFASYLSGRV 1199
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 1632 bits (4225), Expect = 0.0
Identities = 796/1204 (66%), Positives = 949/1204 (78%), Gaps = 4/1204 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
M +EG+ AKE VVTQ S GGFD V+AKDL+E+LE+EIGLVWRCRLKTSWTPPESYP+
Sbjct: 1 METEGS---AKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPN 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ +++ + + R+ +Y +V PHAFVHF A RCEL + LKA+L E+
Sbjct: 58 FEITDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENP 117
Query: 3383 LRVN-RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N RRR T PFK S V EIGTL +RDEF+VGW+GP +GVDF++DPFD +C+ F+
Sbjct: 118 FTLNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRN 177
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFSFKST +VIKCDFKVEFLVRDI E+K Y E + +PRV+YRTADD+I
Sbjct: 178 TAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDI 237
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
+VPF+LLDD+DPWIRTTDF+ SGAIGRC++YR+SI PR G KL +A+ +L++RR+ E
Sbjct: 238 EVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEE 297
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
RR + ++DEP+FG + D FF IH+KEG+ FD+LFLVNA++H+GI NQ+QLS +FF L
Sbjct: 298 YLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 357
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LRN+ EVNV AL+H+ Y+ P+FDA K+LK+ QEWLLKNPK K+ + +D E+RRLV
Sbjct: 358 LRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLV 417
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKAYCLPP VELSNRVLRKYK+V DRFLRVTFMDEG+Q +NS+ L Y+ A IV+ IT
Sbjct: 418 ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAIT 477
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
S+S PQKT IFKRV+SI +GFYLCGR+YSFLAFSSNQLRD SAWFFA+D NI + +
Sbjct: 478 SYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVM---A 534
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
I+SWMG+F K +AKCAARMGQCFSSTYAT++VP +V+ DLPDIKRN Y FSDGIG IT
Sbjct: 535 IKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMIT 594
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
PDLA EVA+KL+ +PPCAYQIRYAGCKGVV CWP G RL LR SM KF S+HTIL
Sbjct: 595 PDLAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTIL 654
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
E+ SWTRFQPGFLNRQI+TLLSAL VPD VF KMQE MV KLNQ+L ++DVAF+VLT SC
Sbjct: 655 EICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASC 714
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
+EQGN AAIMLSAGFKPQ EPHLRGML+C+R+AQL L K RIFVP GRWLMGCLDELG
Sbjct: 715 AEQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELG 774
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LE GQCFIQ S LENCF KHGS+FS T KN++V+ G V+IAKNPCLHPGDIRIL+AV
Sbjct: 775 VLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAV 834
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
D PGLHHL DCLVFPQKG+RPH +EASGSDLDGDLYFVTWDENL+PPSKRSW PM Y A
Sbjct: 835 DAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAA 894
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
K+L +PV QDI+EFF KNM ENLG ICNAHVV ADLSE GALDEKCL LAELAA A
Sbjct: 895 EAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATA 954
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNE--GSEE 696
VDFPKTGK +MP LKPK+YPDFMGK+E QSYKSKK+LG+LYR+I D D++ S E
Sbjct: 955 VDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSE 1014
Query: 695 VTYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSM 516
+ ++ D+PYD DLE+ G+ F++DAW KC+YDGQLN LL YKV EEE VTGHVWSM
Sbjct: 1015 LNFVRGDIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSM 1074
Query: 515 PKYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVT 336
PK +SRK GDLKE+LKH+Y L REFR FE M DF L DDEKN+LYE+KASAWY VT
Sbjct: 1075 PKGSSRKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVT 1134
Query: 335 YHPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYL 156
YHP W++KS++L + +G G+ V LSFAWIA DYL RIKIR + D+ KP++SLA YL
Sbjct: 1135 YHPHWIQKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYL 1194
Query: 155 ADKI 144
AD++
Sbjct: 1195 ADRM 1198
>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643731347|gb|KDP38635.1| hypothetical protein
JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 1628 bits (4216), Expect = 0.0
Identities = 792/1200 (66%), Positives = 946/1200 (78%), Gaps = 4/1200 (0%)
Frame = -2
Query: 3731 GTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVS 3552
GT + K+ VVTQ SFGGF+N V+AKDL+ +LE+ IG VWRCRLKTSWTPPESYP++ ++
Sbjct: 2 GTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKIT 61
Query: 3551 NTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVN 3372
+T+ +HR+NEY++V PHAFVHF A RCEL + PLK +L E+ +N
Sbjct: 62 DTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTLN 121
Query: 3371 -RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFS 3195
RRR T P K SDV EIG + +RDEF VGW+GP SGVDF++DPFD +CK FT +TAFS
Sbjct: 122 QRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAFS 181
Query: 3194 FKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTV 3015
K T + +VI+CDFK+EFLVRDI E+K YK+ + +P V+YRTADD+I V
Sbjct: 182 IKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVLV 241
Query: 3014 PFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRR 2835
PFNLLDD+DPWIRTTDF+ SGAIGRCN+YR+SI PR GAKLERA+ YL++RR+ RR
Sbjct: 242 PFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLRR 301
Query: 2834 QLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNE 2655
L + +EP++G + D FF IH KEG+ F+I+FLVNA++H+GI NQ+QLS++FF LLRN+
Sbjct: 302 PLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRNQ 361
Query: 2654 TAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPT 2475
A++NV AL+H+CSYK P+FDA +RLK VQEWLLKNPKL K + +D V++RRL ITPT
Sbjct: 362 PADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITPT 421
Query: 2474 KAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSI 2295
+AYCLPP +ELSNRVLRKYK DRFLRVTFMDEG+Q +N++ LTYY A IV+DITS S
Sbjct: 422 RAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSF 481
Query: 2294 PQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSW 2115
QKT IFKRVKSI DGFYLCGR+YSFLAFSSNQLRD SAWFFA+D I IR W
Sbjct: 482 SQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKI---RVDQIRKW 538
Query: 2114 MGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLA 1935
MG+F K +AKCAARMGQCFSSTYATV+VP +V+ PDI+RN Y FSDGIG ITPDLA
Sbjct: 539 MGKFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLA 598
Query: 1934 LEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVS 1755
VA+KL+L +NPPCAYQIRYAGCKGVV CWP G RL LRPSM KF S+HT LE+ S
Sbjct: 599 KAVAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICS 658
Query: 1754 WTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQG 1575
WTRFQPGFLNRQI+TLLS L V D +F KMQ +MV KLN++L + DVAF+V+T SC+EQG
Sbjct: 659 WTRFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQG 718
Query: 1574 NSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEH 1395
N+AA+MLSAGFKPQ EPHLRGML+CIR+AQ DL K RIFV GRWLMGCLDELG LE
Sbjct: 719 NTAALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQ 778
Query: 1394 GQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAVDVPG 1218
GQCFIQ S PSLE CF+KHGSRFS T KN++VITG V+IAKNPCLHPGD+RIL+AVD PG
Sbjct: 779 GQCFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPG 838
Query: 1217 LHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKE 1038
L HL DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWDENL+PPSK+SW PM Y A K
Sbjct: 839 LCHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKL 898
Query: 1037 LKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFP 858
L +PV+ QDII+FF KNMV E+LG ICNAHVV ADLSE GALDE C++LAELAA AVDFP
Sbjct: 899 LSRPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFP 958
Query: 857 KTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNE--GSEEVTYL 684
KTGK T+P LKPK+YPDFMGK+E+QSYKS K+LG+LYR I D GD++ S E+
Sbjct: 959 KTGKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCS 1018
Query: 683 PEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYN 504
D+PYDT+LE+ GS ++ +AW KC+YDGQL LLG YKV EEE VTGH+WSMP YN
Sbjct: 1019 SGDIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYN 1078
Query: 503 SRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPR 324
SRKLG+LKE+LKH+Y+AL +EFR FE M DF+ LTDDEKNLLYE+KASAWY VTYHP+
Sbjct: 1079 SRKLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPK 1138
Query: 323 WVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
W+KKS++L EP+ G LSFAWIA DYL RIKI+ +G + DT KP++SL YLAD+I
Sbjct: 1139 WIKKSLELQEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 1627 bits (4212), Expect = 0.0
Identities = 786/1206 (65%), Positives = 956/1206 (79%), Gaps = 6/1206 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
M +EG+ AKE VVTQ S GGFD V+AKDL+E+L++ IGLVWRCRLKTSWTPPESYP+
Sbjct: 1 MEAEGS---AKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPN 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ +++ + + R+ +Y +VVPHAFVHF + RCEL + LK +L ++
Sbjct: 58 FEITDITKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNP 117
Query: 3383 LRVN-RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N RRR T PFK SDV EIG L +RDEF+VGW+GP SGVDF++DPFD +CK F+
Sbjct: 118 FTLNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRN 177
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFS KST +VIKCDFKVEFLVRDI E+ Y E + +P V+YRTADD+I
Sbjct: 178 TAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDI 237
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIF-- 2853
VPF+LLDD+DPWIRTTDF+ SGAIGRC++YR+SI PR G+KL +A+ YL++RR+
Sbjct: 238 EAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVL 297
Query: 2852 -EHRPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEF 2676
E RR++ + DEP+FG + D FF IH+KEG+ F++LFLVNA++H+GI NQ+QLS +F
Sbjct: 298 QEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDF 357
Query: 2675 FGLLRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVR 2496
F LLRN+ EVNV+AL+H+C+Y+ P+F+A +RLK VQEWLLKNP L K+ + D VE+R
Sbjct: 358 FDLLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIR 417
Query: 2495 RLVITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVK 2316
RLVITPTKAYCLPP VELSNRVLRKYK+V DRFLRVTFMDEG+Q++NS++L YY A IV+
Sbjct: 418 RLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVR 477
Query: 2315 DITSHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVT 2136
DITS+S PQKT IFKRV+SI +GFYLCGR+YSFLAFS+NQLRD SAWFF+++ NI+ +
Sbjct: 478 DITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVL- 536
Query: 2135 GTSIRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIG 1956
++SWMG+F + +AKCAARMGQCFSSTYAT++VP +V+ DLPDI+RN YVFSDGIG
Sbjct: 537 --DVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIG 594
Query: 1955 KITPDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDH 1776
ITPDLA EVA+KL+L ++PPCAYQIRYAGCKGVV CWPG G RL LRPSM KF S+H
Sbjct: 595 IITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNH 654
Query: 1775 TILEVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLT 1596
T LE+ SWTRFQPGFLNRQI+TLLS L VPD VF KMQE+MV KLNQ+ N+DVAF+VLT
Sbjct: 655 TTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLT 714
Query: 1595 TSCSEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLD 1416
SC++QGN AAIMLSAGFKP EPHLRGML+C+R+AQL DL KTRIFVP GRWLMGCLD
Sbjct: 715 ASCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLD 774
Query: 1415 ELGELEHGQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRIL 1239
ELG LE GQCFIQ S SLE CF KHG++FS KN++VI G V+IAKNPCLHPGD+R+L
Sbjct: 775 ELGMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVL 834
Query: 1238 DAVDVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDY 1059
+AVDVPGLHHL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTWDENL+PPSKRSW PM Y
Sbjct: 835 EAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQY 894
Query: 1058 KPAAVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELA 879
A K L +PV QDIIEFF KNMV +NLG ICNAHVVHADLSE GA D+ CL LAELA
Sbjct: 895 DAAEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELA 954
Query: 878 AIAVDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGS 702
A AVDFPKTGK +MP LKPK+YPDFMGK+E+QSYKS+K+LG+LYR+I D + D S
Sbjct: 955 ATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAAS 1014
Query: 701 EEVTYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVW 522
E+ +P D+PYD+DLE+ G+ +++DAW KC+YDGQLN LL YKV EEE VTGH+W
Sbjct: 1015 SELNLVPGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIW 1074
Query: 521 SMPKYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYC 342
SMPKY+SRK G+LK++LKH+Y +L +EFR FE M +F+ L D EKN LYEQKASAWY
Sbjct: 1075 SMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQ 1134
Query: 341 VTYHPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLAN 162
V YHP WVKKS++L +P+G G V LSFAWIA DYL RIKIR + D+ KP++SLA
Sbjct: 1135 VVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAK 1194
Query: 161 YLADKI 144
YLAD++
Sbjct: 1195 YLADRM 1200
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 1625 bits (4209), Expect = 0.0
Identities = 792/1205 (65%), Positives = 943/1205 (78%), Gaps = 10/1205 (0%)
Frame = -2
Query: 3728 TLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSN 3549
T + KE VVTQ SFGGFD V+A+DL+ +L+ EIG VWRCRLKTSWTPPESYP++ +++
Sbjct: 3 TKRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITD 62
Query: 3548 TSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVN- 3372
T+++ R + Y +V PHAFVHF A CEL G P+K +L E+ +N
Sbjct: 63 TAVIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQ 122
Query: 3371 RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSF 3192
RRR T PFK SDV EIGTL +RDEF VGW+GP SGVDF++DPFD CK FT +TAFSF
Sbjct: 123 RRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSF 182
Query: 3191 KSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVP 3012
K T +VI+CDFK+EFLVRDI E+K Y + + +P V+YRTADD+I VP
Sbjct: 183 KGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVP 242
Query: 3011 FNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQ 2832
F+LLDD+DPWIRTTDF+ SGAIGRCN+YR+SI PR GAKL+RAL +LR+RR+ E RR
Sbjct: 243 FDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRP 302
Query: 2831 LVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNET 2652
L V EPE+ + D FF IH++EGV+F+++FLVNA++H+GI NQ+QLS+ FF LLRN+
Sbjct: 303 LHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQP 362
Query: 2651 AEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTK 2472
+VN+ ALRH+CSYKHP+FDA KRLK VQ+WLLKNPKL +S++ +D VE+RRL ITPT+
Sbjct: 363 LDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTR 422
Query: 2471 AYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIP 2292
AYCLPP VELSNRVLR+YK++ D+FLRVTFMDEG+Q +N++ LTYY A IV+DITS+S
Sbjct: 423 AYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFS 482
Query: 2291 QKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS-IRSW 2115
QKT IFKRVKSI DGFYLCGRKYSFLAFSSNQLRD SAWFFA+D G T S IR+W
Sbjct: 483 QKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAED----GKTSVSKIRNW 538
Query: 2114 MGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLA 1935
MG+F + +AKCAARMGQCFSSTYATV+VP + DLPDI+RN+Y+FSDGIG ITPDLA
Sbjct: 539 MGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLA 598
Query: 1934 LEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVS 1755
EVA+KL+L +NPPCAYQIRYAGCKGVV CWP G RL LR SM KF S+HT LE+ S
Sbjct: 599 KEVAEKLKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICS 658
Query: 1754 WTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQG 1575
WTRFQPGFLNRQI+TLLS L VPD +F KMQ MV KLNQ+ + DVAF+V+T SC+EQG
Sbjct: 659 WTRFQPGFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQG 718
Query: 1574 NSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEH 1395
N+AAIMLSAGF P+TEPHL GML+CIR+AQL L KTRIFVP GRWLMGCLDELG LEH
Sbjct: 719 NTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEH 778
Query: 1394 GQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAVDVPG 1218
GQCFIQ S PSLE+CF KHGSRFS + K ++V+ G V++AKNPCLHPGDIRIL+AVD P
Sbjct: 779 GQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPE 838
Query: 1217 LHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKE 1038
LHHL DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWDENL+PPSKRSW PM Y A K+
Sbjct: 839 LHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQ 898
Query: 1037 LKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFP 858
L +PV QDII+FF KNMV ENLG ICNAHVVHADLSE GALDE C++LAELAA AVDFP
Sbjct: 899 LNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFP 958
Query: 857 KTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEG-------SE 699
KTGK TMP LKPKLYPDFMGK+++QSY S K+LG+LYR++ D D++ S
Sbjct: 959 KTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSS 1018
Query: 698 EVTYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWS 519
E+ + D+PYD DLE+ GS ++ DAW KC+YDGQL LL YKV EEE VTGH+WS
Sbjct: 1019 ELNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWS 1078
Query: 518 MPKYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCV 339
MPK NSRK G+LKE+LK +Y +L +EFR FE M DF+ LT+DEKNLLYEQKASAWY V
Sbjct: 1079 MPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQV 1138
Query: 338 TYHPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANY 159
YHP+WV KS++L EP+ G LSFAWIA DYL RIKIRC+G DT KP++SL Y
Sbjct: 1139 AYHPKWVNKSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKY 1198
Query: 158 LADKI 144
LAD+I
Sbjct: 1199 LADRI 1203
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1618 bits (4189), Expect = 0.0
Identities = 794/1204 (65%), Positives = 948/1204 (78%), Gaps = 4/1204 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
M +EG+ AKE VVTQ S GGFD V+AKDL+E+LE+EIGLVWRCRLKTSWTPPESYP+
Sbjct: 1 METEGS---AKETVVTQVSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPN 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ +++ + + R+ +Y +V PHAFVHF A RCEL + LKA+L E+
Sbjct: 58 FEIADLTKITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENP 117
Query: 3383 LRVN-RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N RRR T PFK SDV EIGTL +RDEF+VGW+GP +GVDF++DPFD +C+ F+
Sbjct: 118 FTLNQRRRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRN 177
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFSFKST +VIKCDFKVEFLVRDI E+K YKE + +P V+YRTADD+I
Sbjct: 178 TAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYKETSCLVLLLQLASAPWVWYRTADDDI 237
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
+VPF+LLDD+DPWIRTTDF+ SGAIGRC++YR+SI PR G KL +A+ +L++RR+ E
Sbjct: 238 EVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEE 297
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
RR + ++DEP+FG + D FF IH+KEG+ FD+LFLVNA++H+GI NQ+QLS +FF L
Sbjct: 298 YLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 357
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LRN+ EVNV AL+H+ Y+ P+FDA K+LK+ QEWLLKNPKL K+ + +D E+RRL+
Sbjct: 358 LRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRLI 417
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKAYCLPP VELSNRVLRKYK+V DRFLRVTFMDEG+Q +NS+ L Y+ A IV+ IT
Sbjct: 418 ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAIT 477
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
S+S PQKT IFKRV+SI +GFYLCGR+YSFLAFSSNQLRD SAWFFA+D NI + +
Sbjct: 478 SYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVM---A 534
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
I+SWMG+F K +AKCAARMGQCFSSTYAT++VP +V+ DLPDIKRN Y FSDGIG IT
Sbjct: 535 IKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMIT 594
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
PDLA EVA+KL+ +PP AYQIRYAGCKGVV CWP G RL LR SM KF S+HTIL
Sbjct: 595 PDLAREVAEKLKFDFDPPSAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTIL 654
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
E+ SWTRFQPGFLNRQI+TLLSAL VPD VF KMQE MV KLNQ+L ++DVAF+VLT SC
Sbjct: 655 EICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASC 714
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
+E GN AAIMLSAGFKPQ EPHLRGML+C+R+AQL L K RIFVP GRWLMGCLDEL
Sbjct: 715 AELGNVAAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELA 774
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFSWTK-NVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LE GQCFIQ S LENCF KHGS+FS TK N++V+ G V+IAKNPCLHPGDIRIL+AV
Sbjct: 775 VLEQGQCFIQVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAV 834
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
D PGLHHL DCLVFPQKG+RPH +EASGSDLDGDLYFVTWDENL+PPSKRSW PM Y A
Sbjct: 835 DDPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAA 894
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
K+L +PV QDIIEFF KNM ENLG ICNAHVV ADLSE GALDEKCL LAELAA A
Sbjct: 895 EAKQLTRPVNHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATA 954
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNE--GSEE 696
VDFPKTGK +MP LKPK+YPDFMGK+E QSYKSKK+LG+LYR+I D D++ S +
Sbjct: 955 VDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSD 1014
Query: 695 VTYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSM 516
+ ++P DVPYD DLE+ G+ +++DAW KC+YDGQLN LL YKV EEE VTGHVWSM
Sbjct: 1015 LNFVPGDVPYDLDLEVLGATDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSM 1074
Query: 515 PKYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVT 336
PK +SR+ GDLKE+LKH+Y L REFR FE M DF L DDEKN+LYE+KASAWY VT
Sbjct: 1075 PKGSSRQQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVT 1134
Query: 335 YHPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYL 156
YHPRW++KS++L + +G + LSFAWIA DYL RIKIR + D+ KPI+SLA YL
Sbjct: 1135 YHPRWIQKSLELQDSDGAAM---LSFAWIAADYLARIKIRHSRIGNVDSAKPINSLAKYL 1191
Query: 155 ADKI 144
AD++
Sbjct: 1192 ADRM 1195
>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643724398|gb|KDP33599.1| hypothetical protein
JCGZ_07170 [Jatropha curcas]
Length = 1199
Score = 1615 bits (4183), Expect = 0.0
Identities = 781/1199 (65%), Positives = 942/1199 (78%), Gaps = 4/1199 (0%)
Frame = -2
Query: 3728 TLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSN 3549
T + K+ VVTQ SFGGFDN V AKDL+ +LE+EIG VWRCRLKTSWTPPESYP++ +++
Sbjct: 3 TQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEITD 62
Query: 3548 TSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVN- 3372
+ +HR++EY++V PHAFVHF A CEL + PLK +L E+ +N
Sbjct: 63 AAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHLNQ 122
Query: 3371 RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSF 3192
RRR PFK SDV EIGTL +RDEF VGW+GP+SGVDF++DPFD +CK FT +TAFS
Sbjct: 123 RRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAFSI 182
Query: 3191 KSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVP 3012
K T + ++I+CDFK+EFLVRDI E+K Y + + +P V+YRTADD+I +VP
Sbjct: 183 KDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVSVP 242
Query: 3011 FNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQ 2832
F+LLDD+DPWIRTTDF+ SGAIGRCN YR+SI PR GAKL+RA +L++RR+ E RR
Sbjct: 243 FDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLRRP 302
Query: 2831 LVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNET 2652
L + +EP++G + D FF IH+KEG+ F+I+FLVNA++H+GI NQ+QLS+ FF LLRN++
Sbjct: 303 LKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRNQS 362
Query: 2651 AEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTK 2472
++NV AL+H+CSYK P+FDA K LK VQEWLLKNPKL K ++ +D VE+RRL +TPT+
Sbjct: 363 LDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTPTR 422
Query: 2471 AYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIP 2292
AYCLPP VELSNRVLRKYK + DRFLRVTFMDEG+Q +N++ LTYY A IV+DITS S
Sbjct: 423 AYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTSFS 482
Query: 2291 QKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWM 2112
QKT IF+RVKSI DGF LCGR+YSFLAFSSNQLRD SAWFFA+D I + IR WM
Sbjct: 483 QKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKI---SVGQIRKWM 539
Query: 2111 GRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLAL 1932
GRF + +AKCAARMGQCFSSTYATV+VP ++V+ LPDI+RN Y+FSDGIG ITPDLA
Sbjct: 540 GRFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAK 599
Query: 1931 EVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSW 1752
EVA+KL+L +N PCAYQIRYAGCKGVV CWP G RL LRPSM KF S+HT LE+ SW
Sbjct: 600 EVAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSW 659
Query: 1751 TRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGN 1572
TRFQPGFLNRQI+TLLS L V D VF +MQ +MV KLN++L + DVAF+V+T SC+EQGN
Sbjct: 660 TRFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGN 719
Query: 1571 SAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHG 1392
+AAIMLSAGFKPQ EPHLRGML+CIR+AQ L K RIFV GRWLMGCLDELG LE G
Sbjct: 720 TAAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQG 779
Query: 1391 QCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGL 1215
QCFIQ S P LE CF+KHGS+FS T KN++VI G V+IAKNPCLHPGD+RIL+AVD PGL
Sbjct: 780 QCFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGL 839
Query: 1214 HHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKEL 1035
HHL DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWD+NL+PPSK+SW PM Y A K L
Sbjct: 840 HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLL 899
Query: 1034 KKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPK 855
+PV+ QDII+FF KNMV ENLG ICNAHVVHADLSE GALDE C++LAELAA AVDFPK
Sbjct: 900 NRPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPK 959
Query: 854 TGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEGS--EEVTYLP 681
TGK TMP LKPK+YPDFMGK+E+QSYKS K+LG+LYR+IID GD++ + E+ L
Sbjct: 960 TGKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLS 1019
Query: 680 EDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNS 501
D+PYD DLE+ GS ++ +AW KC+YDGQL LLG YKV EEE VTGH+WSMP NS
Sbjct: 1020 GDIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNS 1079
Query: 500 RKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRW 321
RK GDLKE+LKH+Y+AL +EFR FE M D + LTDDEKNL YE+KASAWY V YHP+W
Sbjct: 1080 RKQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKW 1139
Query: 320 VKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
+KKS++L E + G LSF+WIA DYL RIKI+ +G + DT KP++SL YL D+I
Sbjct: 1140 IKKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198
>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 1613 bits (4176), Expect = 0.0
Identities = 784/1206 (65%), Positives = 950/1206 (78%), Gaps = 6/1206 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
M +EG+ AKE VVTQ S GGF V+AKDL E+L++ IGLVWRCRLKTSWTPPESYP+
Sbjct: 1 MEAEGS---AKETVVTQVSVGGFGIHVTAKDLSEYLDRAIGLVWRCRLKTSWTPPESYPN 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ +++ + + R+ +Y +VVPHAFVHF + RCEL + LK +L ++
Sbjct: 58 FEITDITKIERTEDYRRVVPHAFVHFALPQSATWAMNASERCELFLNDKALKVSLGPKNP 117
Query: 3383 LRVNR-RRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N+ RR T PFK SDV EIG+L + DEF+VGW+GP SGVDF++DPFD +C+ F+
Sbjct: 118 FTLNQQRRTTTPFKLSDVGFEIGSLVSHDEFFVGWRGPPSGVDFLVDPFDGTCRFCFSRN 177
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFS KST +VIKC FKVEFLVRDI E+ Y E + +P V+YRTADD+I
Sbjct: 178 TAFSLKSTSEHAVIKCAFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDI 237
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIF-- 2853
VPF+LLDD+DPWIRTTDF+ SGAIGRC++YR+SI PR G+KL +A+ YL++RR+
Sbjct: 238 EAWVPFDLLDDDDPWIRTTDFTGSGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVEVL 297
Query: 2852 -EHRPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEF 2676
E RR++ + DEP+FG + D FF IH+KEG+ FD+LFLVNA++H+GI NQ+QLS +F
Sbjct: 298 QEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDF 357
Query: 2675 FGLLRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVR 2496
F LLRN+ EVNV+AL+H+C+Y+ P+F+A KRLK VQEWLLKNP L K+ + D VE+R
Sbjct: 358 FDLLRNQHTEVNVSALKHICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVEIR 417
Query: 2495 RLVITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVK 2316
RLVITPTKAYCLPP VELSNRVLRKYK+V DRFLRVTFMDEG+Q++NS++L YY A IV+
Sbjct: 418 RLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVR 477
Query: 2315 DITSHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVT 2136
DITS+S QKT IFKRV+SI +GFYLCGR+YSFLAFS+NQLRD SAWFFA++ N++ +
Sbjct: 478 DITSNSFHQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNVSVL- 536
Query: 2135 GTSIRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIG 1956
I+SWMG+F + +AKCAARMGQCFSSTYAT++VP +V+ DLPDI+RN YVFSDGIG
Sbjct: 537 --DIKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGIG 594
Query: 1955 KITPDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDH 1776
ITPDLA EVA+KL+L ++PPCAYQIRYAGCKGVV CWPG G L LRPSM KF S+H
Sbjct: 595 IITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVHLSLRPSMNKFQSNH 654
Query: 1775 TILEVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLT 1596
T LE+ SWTRFQPGFLNRQI+TLLS L VPD VF KMQE+MV KLNQ+ N+DVAF+VLT
Sbjct: 655 TTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLT 714
Query: 1595 TSCSEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLD 1416
SC++QGN AAIMLSAGFKPQ EPHLRGML+C+R+AQL L K RIFVP GRWLMGCLD
Sbjct: 715 ASCADQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLD 774
Query: 1415 ELGELEHGQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRIL 1239
ELG LE GQCFIQ S SLE CF KHG++FS KN++V+ G V+IAKNPCLHPGD+R+L
Sbjct: 775 ELGMLEQGQCFIQVSNSSLEKCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVL 834
Query: 1238 DAVDVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDY 1059
+AVDVPGLHHL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTWDENL+PPSKRSW PM Y
Sbjct: 835 EAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQY 894
Query: 1058 KPAAVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELA 879
A K L +PV QDIIEFF KNMV ENLG ICNAHVVHADLSE GA+DEKCL LAELA
Sbjct: 895 DAAEAKLLARPVNHQDIIEFFAKNMVNENLGAICNAHVVHADLSEHGAMDEKCLTLAELA 954
Query: 878 AIAVDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGS 702
A AVDFPKTGK TMP LKPK+YPDFMGK+E+QSYKS+K+LG+LYR+I D + D S
Sbjct: 955 ATAVDFPKTGKVVTMPSYLKPKVYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAAS 1014
Query: 701 EEVTYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVW 522
E+ +P D+PYD+DLE+ G+ ++ DAW KC+YDGQLN LL YKV EEE VTGH+W
Sbjct: 1015 SELNPVPGDIPYDSDLEVVGASDYINDAWDQKCSYDGQLNGLLSQYKVKREEELVTGHIW 1074
Query: 521 SMPKYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYC 342
SMPKY+SRK G+LK++LKH+Y +L +EFR FE M +F+ L D EKN LYEQKASAWY
Sbjct: 1075 SMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQ 1134
Query: 341 VTYHPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLAN 162
V YHP WVKKS++L +P+G G V LSF WIA DYL RIKIR + D+ KP++SLA
Sbjct: 1135 VAYHPHWVKKSLELQDPDGAGTSVMLSFGWIAADYLARIKIRHRETGNVDSAKPVNSLAK 1194
Query: 161 YLADKI 144
YLAD+I
Sbjct: 1195 YLADRI 1200
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 1605 bits (4156), Expect = 0.0
Identities = 799/1205 (66%), Positives = 947/1205 (78%), Gaps = 5/1205 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
M SEG+ K++VVTQ S GGFD V+A +L +LE IG V RCRLKTS TPPESYPD
Sbjct: 1 MESEGS---EKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPD 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ + +T+ + R+ +Y+KV PHAFVHF A + EL + G PLK +L E+
Sbjct: 58 FEIIDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETP 117
Query: 3383 LRVN-RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N RRR T PFKF DVR EIG L +RDE++ GW+GP+SGVDF++DPFD +CK LFT +
Sbjct: 118 FHLNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKD 177
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFSFK + +VIKC+FKVEFLVR+I E++ ++ + SP VYYRTADD+I
Sbjct: 178 TAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDI 237
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRI--F 2853
+TVPF+LLDD+DPWIRTTDF+ SGAIGRCN+YRISI PR+GAKL++A+ YLR RR+
Sbjct: 238 EETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVL 297
Query: 2852 EHRPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFF 2673
E P+ QL V+DEP+FG + D FF I +KEG++F ++FLVNA++H+GI+NQ+QLS++FF
Sbjct: 298 EDSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFF 357
Query: 2672 GLLRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRR 2493
LLR++ ++N+ AL+H+CSY+HP+FDA +RLKLV +WLLKNPKLLKS + +D VEVRR
Sbjct: 358 DLLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRR 417
Query: 2492 LVITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKD 2313
LVITP+KAYCLPP VELSNRVLR YKEV DRFLRVTFMDEGMQ +N+++L YY A IVK
Sbjct: 418 LVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKV 477
Query: 2312 ITSHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTG 2133
ITS+S PQKT +FKRVK+I DGFYLCGRKYSFLAFSSNQLRD SAWFFA+D +
Sbjct: 478 ITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKK---TSV 534
Query: 2132 TSIRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGK 1953
+I+SWMG+F + VAKCAARMGQCFSSTYATV+VP +V +LPDIKRN Y FSDGIGK
Sbjct: 535 RAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGK 593
Query: 1952 ITPDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHT 1773
I PDLA+EVA+KL+L P AYQIRYAGCKGVV CWP + G RL RPSM KF SDHT
Sbjct: 594 IVPDLAMEVAEKLKLE-GTPSAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHT 652
Query: 1772 ILEVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTT 1593
ILE+ SWTRFQPGFLNRQI+TLLSAL VPD +F KMQESM+ KLNQ+L +TDVAF+VL
Sbjct: 653 ILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIA 712
Query: 1592 SCSEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDE 1413
SC+EQGN+AAIMLSAGFKPQTEPHL+GML+CIR+AQ L K RIFVP GRWLMGCLDE
Sbjct: 713 SCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDE 772
Query: 1412 LGELEHGQCFIQTSLPSLENCFAKHGSRFSWTKNVKVITGKVIIAKNPCLHPGDIRILDA 1233
LG LE GQCFIQ S PSLENCF KHGSRFS KN+KVI G V IAKNPCLHPGD+RIL+A
Sbjct: 773 LGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQKNLKVIKGIVAIAKNPCLHPGDVRILEA 832
Query: 1232 VDVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKP 1053
VD PGL HLVDCLVFPQKGDRPH++EASGSDLDGDLYFVTW+E L+PPSK+SWPPM Y
Sbjct: 833 VDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDS 892
Query: 1052 AAVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAI 873
A K L + VT DII+FFTKNMV ENLG ICNAHVVHAD SE GALDE CL+LAE AA
Sbjct: 893 AEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAAT 952
Query: 872 AVDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEE 696
AVDFPKTGK T+P LKPK+YPDFMGK+EFQ+Y+S K+LG++YR+I D + D S E
Sbjct: 953 AVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSE 1012
Query: 695 VTYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSM 516
+ + VP+D DL IPGS F+ DAW KC+YDGQLN LLG YKV EEE VTGHVWSM
Sbjct: 1013 QIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSM 1072
Query: 515 PKYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVT 336
PKY SRK G+L E+LKHAY++L +EFR FE M DF LTDDEKN LYEQKASAWY VT
Sbjct: 1073 PKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVT 1132
Query: 335 YHPRWVKKSVQLGEP-EGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANY 159
YHP WVKKS++L P E G V LSFAWI DYL RIKIR +G D+ KPI+SLA +
Sbjct: 1133 YHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARF 1192
Query: 158 LADKI 144
L D+I
Sbjct: 1193 LVDRI 1197
>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 1596 bits (4133), Expect = 0.0
Identities = 785/1191 (65%), Positives = 949/1191 (79%), Gaps = 4/1191 (0%)
Frame = -2
Query: 3704 VVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTSLVHRSN 3525
VVTQ SFGGF + V AKDL+ +LE EIG+V+RCRLKTSWTPPES+P++ + NT+ V R++
Sbjct: 11 VVTQVSFGGFQHHVRAKDLVTYLEDEIGVVYRCRLKTSWTPPESFPNFEI-NTADVKRTD 69
Query: 3524 EYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVNRRRVTE-PF 3348
+Y +V PHAFVHF A RCEL + PLK ++ E+ +NRRR T+ PF
Sbjct: 70 DYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFLNNEPLKVSMGLENPYFLNRRRRTKTPF 129
Query: 3347 KFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKSTKRQSV 3168
K SDV EIG+L +DEF+V W+GP GVDF++DPFD +CK FT +TAFSFK TK+ +V
Sbjct: 130 KLSDVHVEIGSLVRQDEFFVSWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSFKGTKKHAV 189
Query: 3167 IKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFNLLDDED 2988
IKCDFKVEFLVR+I E+K Y + + SP V YRTADD+I +VPF+LLDD+D
Sbjct: 190 IKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVPFDLLDDDD 249
Query: 2987 PWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLVVQDEPE 2808
PWIRTTDF+ SGAIGRCN+YR+ I PR GAKL++A+ YLR+RR+ E + +QDEP+
Sbjct: 250 PWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKWPPRIQDEPD 309
Query: 2807 FGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAEVNVTAL 2628
FG + + FFSI Y+E ++F+I+FLVNA++H+G VNQ+QLS+ FF LLR++ E+NV AL
Sbjct: 310 FGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQPKEINVAAL 369
Query: 2627 RHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAYCLPPVV 2448
+HLCSY++P+FDA +RLK+VQ+WLLKNPKL+K + +D VEVRRLVITPTKAYCLPP V
Sbjct: 370 KHLCSYRNPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIVEVRRLVITPTKAYCLPPEV 429
Query: 2447 ELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQKTTIFKR 2268
ELSNRVLRKYKEV DRFLRVTFMDEGMQ++NS++L YY A IVK+ITS+S QKT +FKR
Sbjct: 430 ELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSFLQKTNVFKR 489
Query: 2267 VKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGRFNIKIV 2088
++I NDGFYLCGRKY+FLAFSSNQLRD SAWFFA+ NI+ I SWMG+FN K V
Sbjct: 490 FRNILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISV---GKITSWMGKFNNKNV 546
Query: 2087 AKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEVAQKLQL 1908
AKCAARMGQCFSSTYATV+VP ++V+ D+PDI+RN Y+FSDGIG ITPDLALEVA+KL+L
Sbjct: 547 AKCAARMGQCFSSTYATVEVPSSEVN-DIPDIERNGYIFSDGIGMITPDLALEVAEKLKL 605
Query: 1907 TLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTRFQPGFL 1728
NPPCAYQIR+AGCKGVV CWP RL LR SM KF S H LE+ SWTR+QPGFL
Sbjct: 606 DRNPPCAYQIRFAGCKGVVACWPSKGDRFRLSLRTSMNKFESKHATLEICSWTRYQPGFL 665
Query: 1727 NRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSAAIMLSA 1548
NRQI+TLLS L V D +F +MQE MV KLNQ+L +TDVAF+VLT+SC+EQGN+AAIMLSA
Sbjct: 666 NRQIITLLSTLKVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTSSCAEQGNAAAIMLSA 725
Query: 1547 GFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQCFIQTSL 1368
GFKPQTEPHLRGML+CI++AQL L K RIFV GRWLMG LDELG LE GQCF+Q S
Sbjct: 726 GFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQCFVQVST 785
Query: 1367 PSLENCFAKHGSRFSW-TKNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGLHHLVDCLV 1191
PSLE+CFAKHGS F+ +N++VI G V+IAKNPCLHPGDIRIL+AVD PGLHHL DCLV
Sbjct: 786 PSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 845
Query: 1190 FPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKKPVTQQD 1011
FPQKGDRPHTDEASGSDLDGDLYFVTWDENL+PPSK+SW PM Y PA K +PVTQQD
Sbjct: 846 FPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKRQGRPVTQQD 905
Query: 1010 IIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTGKSATMP 831
II+FF KNM ENLG ICNAHVVHAD S+ GALDE CL+LAELAA+AVDFPKTGK T+P
Sbjct: 906 IIDFFVKNMTNENLGPICNAHVVHADRSDYGALDENCLKLAELAALAVDFPKTGKIVTLP 965
Query: 830 YSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEVTYLPEDVPYDTDL 654
LKP+LYPDF+GK++ QSYKS K+LG+LYRK+ D + D + E+ Y+P D+PYD DL
Sbjct: 966 QHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATTSELHYVPSDIPYDMDL 1025
Query: 653 EIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKLGDLKEK 474
E+PG+ F+ DAW KC+YDGQL L+G YKV EEE VTGHVWS+PK NS+K G+LKE+
Sbjct: 1026 EVPGAADFIFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKER 1085
Query: 473 LKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKKSVQLGE 294
L H+Y AL +EFR FE + + + LTDDEKN+L E+KASAWY VTYHP+WVK+S L E
Sbjct: 1086 LSHSYNALKKEFRQMFENLDSNLEALTDDEKNILCEKKASAWYQVTYHPKWVKQSPPLQE 1145
Query: 293 PEGDG-VPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
P+G G V V LSFAWIA DYL RIKI+C+GV+ D+ KPI+SL YLAD+I
Sbjct: 1146 PDGPGDVVVMLSFAWIAADYLARIKIKCRGVEHIDSTKPINSLKRYLADRI 1196
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 1594 bits (4128), Expect = 0.0
Identities = 785/1203 (65%), Positives = 942/1203 (78%), Gaps = 3/1203 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
M S+G+ K+ VVTQ S GGF V+AKDL+E+ + E+G+VWRCRLKTSWTPPESYP+
Sbjct: 1 MESQGS---EKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPN 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ + +++++ R+++Y+KV PHAFVHF A R EL+ LK +L E+
Sbjct: 58 FEILDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENP 117
Query: 3383 LRVNRRRV-TEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+NRRR T PFK SDV +IG + +RDEF+VGW+GP GVDF++DPFD +CK F+ +
Sbjct: 118 YYLNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRD 177
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFSFK T +VIKCDFKVEFLVRDI E+K Y E +G SPRV+YRTADD I
Sbjct: 178 TAFSFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEI 237
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
++VPF+LLDD+D WIRTTDF+ SGAIGRCNTYR+ I PR GAKL++AL YLR++R+
Sbjct: 238 EESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMD 297
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
R L + DEP+FG ++ D F+ I YKEG+ F+I+FLVNA++H+GI NQ+QLSE+FF L
Sbjct: 298 YVRWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNL 357
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LR++ EVNV AL+H+ SY+ P+FDA KRLK V +WLL+NP L KS + +D VE+RRLV
Sbjct: 358 LRDQPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLV 417
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKA+CL P VELSNRVLRKYKEV DRFLRVTFMDEGMQ +N+++LTYY A IV+D+T
Sbjct: 418 ITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVT 477
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
S QKT +FKRV+SI DGFYLCGRKYSFLAFS+NQLRDSSAWFFA+D + +
Sbjct: 478 STFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVL---Q 534
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
I WMG+F + +AKCAARMGQCFSSTYATV+VP T+V+P LPDI+RN YVFSDGIGKIT
Sbjct: 535 ILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKIT 594
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
PDLA EVAQKL+L LNPPCAYQIRYAGCKGVV CWP G RL LR SM KF SDHT L
Sbjct: 595 PDLAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEEGDGVRLSLRCSMNKFFSDHTTL 654
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
E+ SWTRFQPGFLNRQI+TLLS VPD VF +MQ +MV KLN+IL +TDVAFEVLT+SC
Sbjct: 655 EICSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSC 714
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
SEQGN+AAIMLSAGFKPQTEPHLRG+L+C+R++QL L K RIFVP GRWLMG LDELG
Sbjct: 715 SEQGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELG 774
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LE GQCFIQ S PS+ENCF KHGSRF+ T KN +VI G V+IAKNPCLHPGDIRIL+AV
Sbjct: 775 VLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAV 834
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
D PGLHHL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTW++ L+PP K+SWPPM Y P
Sbjct: 835 DAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPG 894
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
KE+++ V +DII+FF KNMV E+LG ICNAHVVHADLSE GALDEKC+ LAELAA A
Sbjct: 895 ETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATA 954
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEV 693
VDFPKTGK +MP +LKPKLYPDFMGK+E+QSYKS+K+LG+LYR I D + D S E+
Sbjct: 955 VDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEI 1014
Query: 692 TYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMP 513
D+ YDTDLE+ GS ++ DAW KC+YD QL LLG YKV EEE VTGH+WSMP
Sbjct: 1015 NLDSPDINYDTDLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMP 1074
Query: 512 KYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTY 333
KY SRKLGDLKEKL H+Y AL +EFR FE+M + + L +DE+N LYE+KASAWY VTY
Sbjct: 1075 KYTSRKLGDLKEKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTY 1134
Query: 332 HPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLA 153
HP+WV+K ++L + +G V LSFAWIA DYL RIKIR QG D KP++SL YLA
Sbjct: 1135 HPKWVEKKLELQKSDGADPVVMLSFAWIAADYLARIKIRSQGTGNVDFSKPVNSLVKYLA 1194
Query: 152 DKI 144
DKI
Sbjct: 1195 DKI 1197
>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
gi|462422376|gb|EMJ26639.1| hypothetical protein
PRUPE_ppa000422mg [Prunus persica]
Length = 1196
Score = 1593 bits (4126), Expect = 0.0
Identities = 788/1191 (66%), Positives = 941/1191 (79%), Gaps = 4/1191 (0%)
Frame = -2
Query: 3704 VVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTSLVHRSN 3525
VVTQ SFGGF + AKDL+ +LE EIGLV+RCRLKTSWTPPES+P++ + NT+ V R++
Sbjct: 11 VVTQVSFGGFQHHARAKDLVTYLEDEIGLVYRCRLKTSWTPPESFPNFEI-NTADVKRTD 69
Query: 3524 EYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVNRRRVTE-PF 3348
+Y +V PHAFVHF A RCEL PLK +L E+ +NRRR T+ PF
Sbjct: 70 DYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNRRRRTKTPF 129
Query: 3347 KFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKSTKRQSV 3168
K SDV EIG+L +DEF+ W+GP GVDF++DPFD +CK FT +TAFSFK TK+ +V
Sbjct: 130 KLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSFKGTKKHAV 189
Query: 3167 IKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFNLLDDED 2988
IKCDFKVEFLVR+I E+K Y + + SP V YRTADD+I +VPF+LLDD+D
Sbjct: 190 IKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVPFDLLDDDD 249
Query: 2987 PWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLVVQDEPE 2808
PWIRTTDF+ SGAIGRCN+YR+ I PR GAKL++A+ YLR+RR+ E + +QDEP+
Sbjct: 250 PWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKWPPKIQDEPD 309
Query: 2807 FGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAEVNVTAL 2628
FG + + FFSI Y+EG++F+I+FLVNA++H+G VNQ+QLS+ FF LLR++ E+NV AL
Sbjct: 310 FGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQPKEINVAAL 369
Query: 2627 RHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAYCLPPVV 2448
+HLCSY+ P+FDA +RLK+VQ+WLLKNPKL+K + +D EVRRLVITPTKAYCLPP V
Sbjct: 370 KHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVITPTKAYCLPPEV 429
Query: 2447 ELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQKTTIFKR 2268
ELSNRVLRKYKEV DRFLRVTFMDEGMQ++NS++L YY A IVK+ITS+S QKT +FKR
Sbjct: 430 ELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSFLQKTNVFKR 489
Query: 2267 VKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGRFNIKIV 2088
++I NDGFYLCGRKY+FLAFSSNQLRD SAWFFA+ NI+ I SWMG+FN K V
Sbjct: 490 FRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISV---GKITSWMGKFNNKNV 546
Query: 2087 AKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEVAQKLQL 1908
AKCAARMGQCFSSTYATV+V ++V+ D+PDIKRN YVFSDGIG ITPDLALEVA+KL+L
Sbjct: 547 AKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLALEVAEKLKL 605
Query: 1907 TLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTRFQPGFL 1728
NPPCAYQIR+AGCKGVV CWP G RL LR SM KF S HT LE+ SWTR+QPGFL
Sbjct: 606 DRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTRYQPGFL 665
Query: 1727 NRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSAAIMLSA 1548
NRQI+TLLS L V D +F +MQE MV KLNQ+L +TDVAF+VLT SC+EQGN+AAIMLSA
Sbjct: 666 NRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAAIMLSA 725
Query: 1547 GFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQCFIQTSL 1368
GFKPQTEPHLRGML+CI++AQL L K RIFV GRWLMG LDELG LE GQCF+Q S
Sbjct: 726 GFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQCFVQVST 785
Query: 1367 PSLENCFAKHGSRFSW-TKNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGLHHLVDCLV 1191
P LE+CFAKHGS F+ +N++VI G V+IAKNPCLHPGDIRIL+AVD PGLHHL DCLV
Sbjct: 786 PLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLV 845
Query: 1190 FPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKKPVTQQD 1011
FPQKGDRPHTDEASGSDLDGDLYFVTWDENL+PPSK+SW PM Y PA K +PVTQQD
Sbjct: 846 FPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQGRPVTQQD 905
Query: 1010 IIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTGKSATMP 831
II+FF KNM ENLG ICNAHVVHAD S+ GALD CL+LAELAA+AVDFPKTGK ++P
Sbjct: 906 IIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVDFPKTGKIVSLP 965
Query: 830 YSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEVTYLPEDVPYDTDL 654
LKP+LYPDF+GK++ QSYKS K+LG+LYRK+ D + D S E+ Y P D+PYD DL
Sbjct: 966 QHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATSSELHYFPSDIPYDMDL 1025
Query: 653 EIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKLGDLKEK 474
E+PG+ FV DAW KC+YDGQL L+G YKV EEE VTGHVWS+PK NS+K G+LKE+
Sbjct: 1026 EVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKER 1085
Query: 473 LKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKKSVQLGE 294
L H+Y AL +EFR FE + + + LTDDEKNLL E+KASAWY VTYHP+WVK+S L E
Sbjct: 1086 LSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQSPPLQE 1145
Query: 293 PEGDG-VPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
P+G G V V LSFAWIA DYL RIKI+C GV+ D+ KPI+SL YLAD+I
Sbjct: 1146 PDGPGDVVVMLSFAWIAADYLARIKIKCHGVEHIDSTKPINSLKRYLADRI 1196
>ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca
subsp. vesca]
Length = 1200
Score = 1593 bits (4125), Expect = 0.0
Identities = 784/1203 (65%), Positives = 936/1203 (77%), Gaps = 3/1203 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
MG + + VVTQ SFGGF + V+AK+L+ +LE EIGLV+RCRLKTSWTPPES P+
Sbjct: 1 MGKMELEERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCRLKTSWTPPESVPN 60
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
+ +S+ + + +++Y KV PHAFVHF RC+L LKA+L E+
Sbjct: 61 FEISDAADIETTDDYRKVEPHAFVHFASPESVTAVMDAVGRCQLFFNNQALKASLGPENL 120
Query: 3383 LRVNRRRVTE-PFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N+RR T+ PFK +DVR EIG+L DEF+V WKGP+ GVDFV+DPFD +CK F +
Sbjct: 121 FNMNKRRRTKIPFKLADVRLEIGSLVRLDEFFVAWKGPDHGVDFVVDPFDGTCKFCFRRD 180
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFSFK + +VI CDFK EF VR+I E K Y E SP V YRTADD+I
Sbjct: 181 TAFSFKGLNKHAVITCDFKAEFQVREIGEFKHYTEPLYHVLLLRLVSSPWVSYRTADDDI 240
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
+V F+LLDD+DPWIRTTDF+ +GAIGRCN YR+ I PR GAKL++A+ YL++RR+ E
Sbjct: 241 DQSVLFDLLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHGAKLKKAMIYLKERRVQEL 300
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
++ +QDEP FG + D FSIHY++ ++FDILFLVNA++H+GI+NQ+QLSE FF L
Sbjct: 301 FIKKPPRIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDL 360
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LRN+ E+NV AL+HLCSYKHP+FDASKRLKLVQEWLL+NPKL+K+ + +D EVRRLV
Sbjct: 361 LRNQPEEINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDIAEVRRLV 420
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKAYCLPP VELSNRVLRKYKEV DRFLRVTFMDEGMQ +NS+++ Y A IVK+IT
Sbjct: 421 ITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVAPIVKEIT 480
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
++ PQKT ++ R+++I +GF+LCGRKYSFLAFSSNQLRD SAWFFA+D I+ + G
Sbjct: 481 ENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTIS-IQG-- 537
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
I++WMGRF + VAKCAARMGQCFSSTYATV+VP TQV+ +LPDI+RN YVFSDGIG+IT
Sbjct: 538 IKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRIT 597
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
PDLA+EVA+KL+L +PP AYQIRY GCKGVV CWP + G RL LR SM KFASDHT L
Sbjct: 598 PDLAMEVAEKLKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTL 657
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
E+ SWTR QPGFLNRQI+TLLSAL VPD +F MQE+MV KL Q+L +TDVAF+VLT SC
Sbjct: 658 EICSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASC 717
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
+EQGNSAAIMLSAGFKPQTEPHLRGML+CI++AQL L KTRIFVP GRWLMGCLDELG
Sbjct: 718 AEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELG 777
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LE GQCF+Q S PSLENCFAKHGSRF T KN++VI G V++AKNPCLHPGDIRIL+AV
Sbjct: 778 VLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAV 837
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
D PGLHHL DCLVFPQKG RPHTDEASGSDLDGDLYFVTWDENL+PP K+SW PM+Y+PA
Sbjct: 838 DAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPA 897
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
K + VT QD+IEFF +NMV ENLG ICNAHVVH+D SE GA DE CL+LAELAA+A
Sbjct: 898 EAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVA 957
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEV 693
VDFPKTGK TMP LKPKLYPDFMGK ++QSYKS K+LG+LYRKI D + D S E
Sbjct: 958 VDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQ 1017
Query: 692 TYLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMP 513
++P DV YD DLE+P + F+ADAW KC+YD QL L+ YK+ EEE VTGHVWSMP
Sbjct: 1018 NHVPSDVKYDMDLEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMP 1077
Query: 512 KYNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTY 333
KY SRK G+L+E+LKH+Y+AL +EFR FE M F+ L DD+KN YEQKASAWY VTY
Sbjct: 1078 KYTSRKQGELQERLKHSYSALKKEFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTY 1137
Query: 332 HPRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLA 153
HP WVKKS+ L P+G G V LSFAWIA DYL RIKI+ + V D KPI+ L YLA
Sbjct: 1138 HPDWVKKSLDLHGPDGPGDVVMLSFAWIAADYLARIKIKRREVSNIDPKKPINILTKYLA 1197
Query: 152 DKI 144
D+I
Sbjct: 1198 DRI 1200
>ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca
subsp. vesca]
Length = 1197
Score = 1592 bits (4122), Expect = 0.0
Identities = 782/1196 (65%), Positives = 934/1196 (78%), Gaps = 3/1196 (0%)
Frame = -2
Query: 3722 QEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTS 3543
+ + VVTQ SFGGF + V+AK+L+ +LE EIGLV+RCRLKTSWTPPES P++ +S+ +
Sbjct: 5 ERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCRLKTSWTPPESVPNFEISDAA 64
Query: 3542 LVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVNRRR 3363
+ +++Y KV PHAFVHF RC+L LKA+L E+ +N+RR
Sbjct: 65 DIETTDDYRKVEPHAFVHFASPESVTAVMDAVGRCQLFFNNQALKASLGPENLFNMNKRR 124
Query: 3362 VTE-PFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKS 3186
T+ PFK +DVR EIG+L DEF+V WKGP+ GVDFV+DPFD +CK F +TAFSFK
Sbjct: 125 RTKIPFKLADVRLEIGSLVRLDEFFVAWKGPDHGVDFVVDPFDGTCKFCFRRDTAFSFKG 184
Query: 3185 TKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFN 3006
+ +VI CDFK EF VR+I E K Y E SP V YRTADD+I +V F+
Sbjct: 185 LNKHAVITCDFKAEFQVREIGEFKHYTEPLYHVLLLRLVSSPWVSYRTADDDIDQSVLFD 244
Query: 3005 LLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLV 2826
LLDD+DPWIRTTDF+ +GAIGRCN YR+ I PR GAKL++A+ YL++RR+ E ++
Sbjct: 245 LLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHGAKLKKAMIYLKERRVQELFIKKPPR 304
Query: 2825 VQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAE 2646
+QDEP FG + D FSIHY++ ++FDILFLVNA++H+GI+NQ+QLSE FF LLRN+ E
Sbjct: 305 IQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDLLRNQPEE 364
Query: 2645 VNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAY 2466
+NV AL+HLCSYKHP+FDASKRLKLVQEWLL+NPKL+K+ + +D EVRRLVITPTKAY
Sbjct: 365 INVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKAY 424
Query: 2465 CLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQK 2286
CLPP VELSNRVLRKYKEV DRFLRVTFMDEGMQ +NS+++ Y A IVK+IT ++ PQK
Sbjct: 425 CLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQK 484
Query: 2285 TTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGR 2106
T ++ R+++I +GF+LCGRKYSFLAFSSNQLRD SAWFFA+D I+ + G I++WMGR
Sbjct: 485 TKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTIS-IQG--IKNWMGR 541
Query: 2105 FNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEV 1926
F + VAKCAARMGQCFSSTYATV+VP TQV+ +LPDI+RN YVFSDGIG+ITPDLA+EV
Sbjct: 542 FTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEV 601
Query: 1925 AQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTR 1746
A+KL+L +PP AYQIRY GCKGVV CWP + G RL LR SM KFASDHT LE+ SWTR
Sbjct: 602 AEKLKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEICSWTR 661
Query: 1745 FQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSA 1566
QPGFLNRQI+TLLSAL VPD +F MQE+MV KL Q+L +TDVAF+VLT SC+EQGNSA
Sbjct: 662 LQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQGNSA 721
Query: 1565 AIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQC 1386
AIMLSAGFKPQTEPHLRGML+CI++AQL L KTRIFVP GRWLMGCLDELG LE GQC
Sbjct: 722 AIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEQGQC 781
Query: 1385 FIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGLHH 1209
F+Q S PSLENCFAKHGSRF T KN++VI G V++AKNPCLHPGDIRIL+AVD PGLHH
Sbjct: 782 FVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGLHH 841
Query: 1208 LVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKK 1029
L DCLVFPQKG RPHTDEASGSDLDGDLYFVTWDENL+PP K+SW PM+Y+PA K +
Sbjct: 842 LHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPAEAKLSGR 901
Query: 1028 PVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTG 849
VT QD+IEFF +NMV ENLG ICNAHVVH+D SE GA DE CL+LAELAA+AVDFPKTG
Sbjct: 902 SVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVAVDFPKTG 961
Query: 848 KSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEVTYLPEDV 672
K TMP LKPKLYPDFMGK ++QSYKS K+LG+LYRKI D + D S E ++P DV
Sbjct: 962 KIVTMPPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQNHVPSDV 1021
Query: 671 PYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKL 492
YD DLE+P + F+ADAW KC+YD QL L+ YK+ EEE VTGHVWSMPKY SRK
Sbjct: 1022 KYDMDLEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSRKQ 1081
Query: 491 GDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKK 312
G+L+E+LKH+Y+AL +EFR FE M F+ L DD+KN YEQKASAWY VTYHP WVKK
Sbjct: 1082 GELQERLKHSYSALKKEFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTYHPDWVKK 1141
Query: 311 SVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
S+ L P+G G V LSFAWIA DYL RIKI+ + V D KPI+ L YLAD+I
Sbjct: 1142 SLDLHGPDGPGDVVMLSFAWIAADYLARIKIKRREVSNIDPKKPINILTKYLADRI 1197
>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
sinensis]
Length = 1197
Score = 1585 bits (4103), Expect = 0.0
Identities = 779/1193 (65%), Positives = 938/1193 (78%), Gaps = 3/1193 (0%)
Frame = -2
Query: 3713 KEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTSLVH 3534
K +V Q SFGGFD V A +L+++LE E+G VWRCRLKTS TP ESYPD++V+NT+ V
Sbjct: 8 KLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFSVTNTAEVR 67
Query: 3533 RSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVNRR-RVT 3357
++++YEKV PHAFVHF A R EL + G LK +L E+ R+N+R R +
Sbjct: 68 KTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTS 127
Query: 3356 EPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKSTKR 3177
PFK DV EIGTL +RDEF+V W+GP SG DF++DPFD +CK FT + AF+ KS+
Sbjct: 128 TPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSSTE 187
Query: 3176 QSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFNLLD 2997
+VIKC+FKVEFLVR+I +K Y E + SPRV+YRTADD+I VPF++LD
Sbjct: 188 HAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLD 247
Query: 2996 DEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLVVQD 2817
D+DPWIRTTDF+ SGAIGRCN+YRISIS R KL + + YL +RR+ R + +++
Sbjct: 248 DDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSLSRPITIRE 307
Query: 2816 EPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAEVNV 2637
EP+F + D FF IHY+EG++F+I+FLVNA++H+GI+NQ+QLS+ FF LLR ++ EVNV
Sbjct: 308 EPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNV 367
Query: 2636 TALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAYCLP 2457
AL+H+ SYK P+FDA KRLKLVQEWLLK+P+L K + +D VEVRRLVITPTKAYCLP
Sbjct: 368 AALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYCLP 427
Query: 2456 PVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQKTTI 2277
P VELSNRVLRKYK++ DRFLRVTFMDEG+Q +N+++L+Y+ A IV+DIT +S QKT +
Sbjct: 428 PEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDITLNSFSQKTRV 487
Query: 2276 FKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGRFNI 2097
FKRV+SI + GFYLCGRK+SFLAFSS+QLRD SAWFF++D + + I+ WMGRF
Sbjct: 488 FKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVL---DIKKWMGRFTD 544
Query: 2096 KIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEVAQK 1917
K +AKCAARMGQCFSSTYATV+VP T+VDP+LPDIKRN YVFSDGIGKITPDLA+EVAQK
Sbjct: 545 KNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQK 604
Query: 1916 LQLTLNPP-CAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTRFQ 1740
L+L +NPP CAYQIRYAGCKGVV CWP G R+ LR SM KF S HT LE+ SWTRFQ
Sbjct: 605 LKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQ 664
Query: 1739 PGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSAAI 1560
PGFLNRQI+TLLS L VPD +F MQ+SM+ KLNQ+L ++DVAFEVLT +C+EQGN+AAI
Sbjct: 665 PGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAAI 724
Query: 1559 MLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQCFI 1380
MLSAGF PQTEPHLRGML+CIR+AQL L K RIFVP GRWLMGCLDELG LE GQCFI
Sbjct: 725 MLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGVLEGGQCFI 784
Query: 1379 QTSLPSLENCFAKHGSRFSWTKNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGLHHLVD 1200
Q S P L NCF+KHGSRF+ TK ++VI G V+IAKNPCLHPGDIRIL+AVD P LHHL D
Sbjct: 785 QVSEPFLGNCFSKHGSRFAETKKLQVIKGFVVIAKNPCLHPGDIRILEAVDHPELHHLYD 844
Query: 1199 CLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKKPVT 1020
CLVFPQKGDRPHT+EASGSDLDGDLYFVTWDENL+PPSK+SWPPM+Y A K L +PV
Sbjct: 845 CLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAEAKTLTRPVD 904
Query: 1019 QQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTGKSA 840
Q+DIIEFF K+MV ENLG ICNAHVVHAD SE GALDE C+ LAELAA AVDFPKTGK
Sbjct: 905 QRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPKTGKIV 964
Query: 839 TMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEVTYLPEDVPYD 663
TMP LKPKLYPDFMGK+ +QSYKS K+LG+LYR+ D + D S EV P D+ YD
Sbjct: 965 TMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYD 1024
Query: 662 TDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKLGDL 483
TDLE+P S F+ADAW+ KC+YDGQLN LL YKV+ EEE VTGH+WSMPKYNSRK G+L
Sbjct: 1025 TDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGEL 1084
Query: 482 KEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKKSVQ 303
KE+LKH+Y+AL +EFR FE M D ++L++DEKN L+E+KASAWY VTYHP WVKKS+
Sbjct: 1085 KERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLD 1144
Query: 302 LGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
L E + V LSFAWIA DYL RIKIRC+ + DT KP++ LA Y+AD+I
Sbjct: 1145 LQEQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVADRI 1197
>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
gi|719995135|ref|XP_010254391.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995138|ref|XP_010254392.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995142|ref|XP_010254393.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
Length = 1193
Score = 1584 bits (4102), Expect = 0.0
Identities = 776/1202 (64%), Positives = 948/1202 (78%), Gaps = 2/1202 (0%)
Frame = -2
Query: 3743 MGSEGTLQEAKEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPD 3564
MGSEGT +++++Q SFGGFDN V+A +L +FLEKEIG +WRCRLKTS TPPESYPD
Sbjct: 1 MGSEGT---KNDMIISQVSFGGFDNNVTASELTDFLEKEIGTIWRCRLKTSSTPPESYPD 57
Query: 3563 YTVSNTSLVHRSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESS 3384
Y V++ + +++ Y+KV PHAFVHF A RC+L++ PLK NL +S
Sbjct: 58 YDVTDMDAIQKTDGYDKVKPHAFVHFLSPEAATAALDAAGRCDLVLNRHPLKVNLGPQSP 117
Query: 3383 LRVN-RRRVTEPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNE 3207
+N RRR +PFK D +IG+L +DEF V WK P VDF++DPFD +CKILFT E
Sbjct: 118 FLLNQRRRKIDPFKIPDSCIKIGSLVGQDEFVVCWKAPQ--VDFIVDPFDRTCKILFTKE 175
Query: 3206 TAFSFKSTKRQSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNI 3027
TAFSFK T VIKC+FK+EF V DI +K Y R+ SP +YYRTADD+I
Sbjct: 176 TAFSFKDTMAYVVIKCNFKLEFFVSDISYIKQYTGRSSLVILLHLRSSPCIYYRTADDDI 235
Query: 3026 HDTVPFNLLDDEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEH 2847
+D+VPF++LDDEDPWIRTTDF+ S IGRCN+YRISISPRFG +L + + YLR+ RI +
Sbjct: 236 YDSVPFDMLDDEDPWIRTTDFTPSRVIGRCNSYRISISPRFGPRLNKVMNYLRKHRIPDE 295
Query: 2846 RPRRQLVVQDEPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGL 2667
PR L ++DEP FG + + FF I +KEG++F+ +F++NA++H+GI+NQ+QLS+EFF L
Sbjct: 296 SPRMPLRIRDEPNFGMLMSEFFFCIDHKEGMSFETIFMLNAVIHKGIINQHQLSDEFFEL 355
Query: 2666 LRNETAEVNVTALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLV 2487
LR+++ +VNVTAL+++ SY+ P+ +A LK Q LL NPKL+K ++ S+D VE+R+LV
Sbjct: 356 LRSQSTDVNVTALQNIYSYRQPVLNAYTSLKDAQRCLLDNPKLIKISKGSDDFVEMRKLV 415
Query: 2486 ITPTKAYCLPPVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDIT 2307
ITPTKAYCLPP VELSNRVLRKYK V +RFLRV+F DE MQQL+S+ L YY A IV+DIT
Sbjct: 416 ITPTKAYCLPPEVELSNRVLRKYKHVANRFLRVSFKDERMQQLSSNALNYYVAPIVRDIT 475
Query: 2306 SHSIPQKTTIFKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTS 2127
S+ PQKTT+F RVK+I ++GF+LCGRKYSFLAFSSNQLRD SAWFFA+D NI +
Sbjct: 476 SNPFPQKTTVFNRVKTILSNGFFLCGRKYSFLAFSSNQLRDRSAWFFAEDKNIKVI---E 532
Query: 2126 IRSWMGRFNIKIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKIT 1947
++ WMGRF + VAKCAARMG CFSSTYATV+VP +V+ +LPDI+RN YVFSDGIG +T
Sbjct: 533 VKKWMGRFTNRNVAKCAARMGLCFSSTYATVEVPLKEVNLELPDIERNGYVFSDGIGMLT 592
Query: 1946 PDLALEVAQKLQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTIL 1767
PDL++EVA+KLQLT NPPCAYQIRYAGCKGV+ CWPG + G RL LRPSM KF S HTIL
Sbjct: 593 PDLSMEVAEKLQLTANPPCAYQIRYAGCKGVIVCWPGKEDGIRLSLRPSMNKFESRHTIL 652
Query: 1766 EVVSWTRFQPGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSC 1587
EV SWTRFQP +LNRQI+TLLSAL VPD VF +MQ+SMV KLNQ++ENTDVAF+V+T+SC
Sbjct: 653 EVCSWTRFQPSYLNRQIITLLSALCVPDDVFSRMQDSMVSKLNQMIENTDVAFDVVTSSC 712
Query: 1586 SEQGNSAAIMLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELG 1407
+EQGN+AAIMLSAGFKPQ EPHL+GMLSCIR+AQL DL K+RIFVP GRWLMGCLDEL
Sbjct: 713 AEQGNTAAIMLSAGFKPQMEPHLKGMLSCIRAAQLRDLLEKSRIFVPSGRWLMGCLDELA 772
Query: 1406 ELEHGQCFIQTSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAV 1230
LE GQCFIQ S PSLENCF+KHGSRFS KN +V+ G V IAKNPCLHPGDIRIL+A+
Sbjct: 773 VLEEGQCFIQVSKPSLENCFSKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPGDIRILEAI 832
Query: 1229 DVPGLHHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPA 1050
DVP LHHL+DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWDE+L+PPSK+S PMDY PA
Sbjct: 833 DVPSLHHLIDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEHLIPPSKQSLVPMDYSPA 892
Query: 1049 AVKELKKPVTQQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIA 870
VK+L + V +D+I+FF K+MV E LGVICNAHVVHADLSE GALDEKC++LAELAA A
Sbjct: 893 EVKKLPRDVNHRDLIDFFMKSMVNEKLGVICNAHVVHADLSEYGALDEKCIQLAELAATA 952
Query: 869 VDFPKTGKSATMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEGSEEVT 690
VDFPKTGK T+P LKPK YPDFMGK+EFQSYKS K+LG+LYRKI DF ++ E+T
Sbjct: 953 VDFPKTGKVVTVPQELKPKRYPDFMGKEEFQSYKSNKILGKLYRKIKDFSDEDVEESEIT 1012
Query: 689 YLPEDVPYDTDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPK 510
+ ED+PYD LE+ GS +ADAW+ KC +D QL LLG YKV+ EEE VTGH+WSMPK
Sbjct: 1013 FAAEDIPYDVHLEVLGSSDHLADAWNLKCLHDAQLTTLLGQYKVNREEEVVTGHIWSMPK 1072
Query: 509 YNSRKLGDLKEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYH 330
YNS K G+LKE+LK+AY AL +EFR +FE + + LTDDEKN +YEQKASAWY VTYH
Sbjct: 1073 YNSNKQGELKERLKNAYNALKKEFRQAFEKIDETLQ-LTDDEKNTIYEQKASAWYQVTYH 1131
Query: 329 PRWVKKSVQLGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLAD 150
PRW+ K+++L E E + P LSFAWI DYLVRIKI+ + ++ D KPI++LANYLAD
Sbjct: 1132 PRWIMKTLKLREHEDESNPAMLSFAWIPADYLVRIKIKHRDMENVDARKPINALANYLAD 1191
Query: 149 KI 144
+I
Sbjct: 1192 RI 1193
>gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sinensis]
Length = 1197
Score = 1583 bits (4100), Expect = 0.0
Identities = 779/1193 (65%), Positives = 937/1193 (78%), Gaps = 3/1193 (0%)
Frame = -2
Query: 3713 KEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTSLVH 3534
K +V Q SFGGFD V A +L+++LE E+G VWRCRLKTS TP ESYPD+ V+NT+ V
Sbjct: 8 KLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFYVTNTAEVR 67
Query: 3533 RSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVNRR-RVT 3357
++++YEKV PHAFVHF A R EL + G LK +L E+ R+N+R R +
Sbjct: 68 KTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGRALKVSLGPENPFRLNQRGRTS 127
Query: 3356 EPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKSTKR 3177
PFK DV EIGTL +RDEF+V W+GP SG DF++DPFD +CK FT + AF+ KS+
Sbjct: 128 TPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSSTE 187
Query: 3176 QSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFNLLD 2997
+VIKC+FKVEFLVR+I +K Y E + SPRV+YRTADD+I VPF++LD
Sbjct: 188 HAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLD 247
Query: 2996 DEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLVVQD 2817
D+DPWIRTTDF+ SGAIGRCN+YRISIS R KL + + YL +RR+ R + +++
Sbjct: 248 DDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSLSRPITIRE 307
Query: 2816 EPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAEVNV 2637
EP+F + D FF IHY+EG++F+I+FLVNA++H+GI+NQ+QLS+ FF LLR ++ EVNV
Sbjct: 308 EPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLRGQSREVNV 367
Query: 2636 TALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAYCLP 2457
AL+H+ SYK P+FDA KRLKLVQEWLLK+P+L K + +D VEVRRLVITPTKAYCLP
Sbjct: 368 AALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVITPTKAYCLP 427
Query: 2456 PVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQKTTI 2277
P VELSNRVLRKYK++ DRFLRVTFMDEG+Q +N+++L+Y+ A IV+DIT +S QKT +
Sbjct: 428 PEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDITLNSFSQKTRV 487
Query: 2276 FKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGRFNI 2097
FKRV+SI + GFYLCGRK+SFLAFSS+QLRD SAWFF++D + + I+ WMGRF
Sbjct: 488 FKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVL---DIKKWMGRFTD 544
Query: 2096 KIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEVAQK 1917
K +AKCAARMGQCFSSTYATV+VP T+VDP+LPDIKRN YVFSDGIGKITPDLA+EVAQK
Sbjct: 545 KNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQK 604
Query: 1916 LQLTLNPP-CAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTRFQ 1740
L+L +NPP CAYQIRYAGCKGVV CWP G R+ LR SM KF S HT LE+ SWTRFQ
Sbjct: 605 LKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQ 664
Query: 1739 PGFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSAAI 1560
PGFLNRQI+TLLS L VPD +F MQ+SM+ KLNQ+L ++DVAFEVLT +C+EQGN+AAI
Sbjct: 665 PGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAAI 724
Query: 1559 MLSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQCFI 1380
MLSAGF PQTEPHLRGML+CIR+AQL L K RIFVP GRWLMGCLDELG LE GQCFI
Sbjct: 725 MLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGVLEGGQCFI 784
Query: 1379 QTSLPSLENCFAKHGSRFSWTKNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGLHHLVD 1200
Q S P L NCF+KHGSRF+ TK ++VI G V+IAKNPCLHPGDIRIL+AVD P LHHL D
Sbjct: 785 QVSEPFLGNCFSKHGSRFAETKKLQVIKGFVVIAKNPCLHPGDIRILEAVDHPELHHLYD 844
Query: 1199 CLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKKPVT 1020
CLVFPQKGDRPHT+EASGSDLDGDLYFVTWDENL+PPSK+SWPPM+Y A K L +PV
Sbjct: 845 CLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAEAKTLTRPVD 904
Query: 1019 QQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTGKSA 840
Q+DIIEFF K+MV ENLG ICNAHVVHAD SE GALDE C+ LAELAA AVDFPKTGK
Sbjct: 905 QRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPKTGKIV 964
Query: 839 TMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIID-FQGDNEGSEEVTYLPEDVPYD 663
TMP LKPKLYPDFMGK+ +QSYKS K+LG+LYR+ D + D S EV P D+ YD
Sbjct: 965 TMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYD 1024
Query: 662 TDLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKLGDL 483
TDLE+P S F+ADAW+ KC+YDGQLN LL YKV+ EEE VTGH+WSMPKYNSRK G+L
Sbjct: 1025 TDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGEL 1084
Query: 482 KEKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKKSVQ 303
KE+LKH+Y+AL +EFR FE M D ++L++DEKN L+E+KASAWY VTYHP WVKKS+
Sbjct: 1085 KERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLD 1144
Query: 302 LGEPEGDGVPVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
L E + V LSFAWIA DYL RIKIRC+ + DT KP++ LA Y+AD+I
Sbjct: 1145 LQEQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVADRI 1197
>ref|XP_010048973.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis]
gi|629116728|gb|KCW81403.1| hypothetical protein
EUGRSUZ_C02780 [Eucalyptus grandis]
Length = 1195
Score = 1570 bits (4064), Expect = 0.0
Identities = 771/1193 (64%), Positives = 929/1193 (77%), Gaps = 3/1193 (0%)
Frame = -2
Query: 3713 KEIVVTQASFGGFDNQVSAKDLIEFLEKEIGLVWRCRLKTSWTPPESYPDYTVSNTSLVH 3534
K+ VVTQ GGFD V+AK+L+E+LE +GL+WRCRLKTSWTPPESYPD+ V++ +
Sbjct: 8 KDTVVTQIGVGGFDPNVTAKELVEYLEDTVGLIWRCRLKTSWTPPESYPDFEVTSFDTIQ 67
Query: 3533 RSNEYEKVVPHAFVHFXXXXXXXXXXXXASRCELIMKGCPLKANLVTESSLRVN-RRRVT 3357
+EY KV PHAFVHF + L + PLK NL E+ +N RRR T
Sbjct: 68 IVDEYRKVEPHAFVHFALPEAASSAYELSQNNGLFLNNKPLKVNLGPENPFHMNQRRRTT 127
Query: 3356 EPFKFSDVRAEIGTLFTRDEFWVGWKGPNSGVDFVLDPFDSSCKILFTNETAFSFKSTKR 3177
P+K +V EIGTL T +EF V W+GP+SGVDF +DPFDS C+ FT +TAFSFK
Sbjct: 128 TPYKLPEVCLEIGTLITPEEFLVAWRGPSSGVDFFVDPFDSKCRFCFTRKTAFSFKDLSF 187
Query: 3176 QSVIKCDFKVEFLVRDIREMKLYKERAGPXXXXXXXXSPRVYYRTADDNIHDTVPFNLLD 2997
+VI CDFK+EFLVRDI E+K Y+E + P V YRTADDN+ +VPF+LLD
Sbjct: 188 YAVINCDFKMEFLVRDINEIKQYREMSSIVVLLQLASPPHVSYRTADDNVEVSVPFDLLD 247
Query: 2996 DEDPWIRTTDFSCSGAIGRCNTYRISISPRFGAKLERALAYLRQRRIFEHRPRRQLVVQD 2817
DEDPWIRTTD + SGA+GRCNTYR+S+ PR G KL++A+ YLR+RR+ E PRR L ++D
Sbjct: 248 DEDPWIRTTDLTASGAVGRCNTYRVSVPPRHGPKLKKAMDYLRERRVQESSPRRPLKIRD 307
Query: 2816 EPEFGAALEDTFFSIHYKEGVNFDILFLVNALLHRGIVNQYQLSEEFFGLLRNETAEVNV 2637
EP FG +EDTFFSIH +EG++FDI+FL+NA++H+ + +Q+QLSE FF LL+++ EVN+
Sbjct: 308 EPNFGRLMEDTFFSIH-QEGIHFDIMFLLNAVIHKNVFSQHQLSERFFELLKSQPKEVNI 366
Query: 2636 TALRHLCSYKHPIFDASKRLKLVQEWLLKNPKLLKSNRVSEDNVEVRRLVITPTKAYCLP 2457
AL+H+CSYK P+FDA KRLKLVQEWLLKNPKL+K+ + D +E+RRLV+TPTKA+CLP
Sbjct: 367 AALKHICSYKRPVFDAYKRLKLVQEWLLKNPKLVKNQKELNDIIEIRRLVVTPTKAHCLP 426
Query: 2456 PVVELSNRVLRKYKEVMDRFLRVTFMDEGMQQLNSSLLTYYPAFIVKDITSHSIPQKTTI 2277
P +ELSNRVLR+YK+V DRFLRVTFMDEG++ +N+++L YY A I+KD+ S S QKT I
Sbjct: 427 PELELSNRVLRQYKDVADRFLRVTFMDEGLETMNANVLNYYVAPILKDMKSVSFSQKTKI 486
Query: 2276 FKRVKSICNDGFYLCGRKYSFLAFSSNQLRDSSAWFFADDNNITGVTGTSIRSWMGRFNI 2097
FKRV+ I DGFYLCGRKYSFLAFSSNQLRD SAWFFA+D + IR+WMG+FN
Sbjct: 487 FKRVRMIMTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDK---AINVNKIRAWMGKFNN 543
Query: 2096 KIVAKCAARMGQCFSSTYATVDVPFTQVDPDLPDIKRNDYVFSDGIGKITPDLALEVAQK 1917
+ VAKC ARMGQCFSSTYATV+VP +V DLPDI+RN Y FSDGIG ITPDLA EVA+K
Sbjct: 544 RNVAKCTARMGQCFSSTYATVEVPRKEVHHDLPDIERNGYCFSDGIGTITPDLAREVAEK 603
Query: 1916 LQLTLNPPCAYQIRYAGCKGVVTCWPGSDGGPRLFLRPSMTKFASDHTILEVVSWTRFQP 1737
L+L LN P AYQIRYAG KGVV CWP G RL LR SM KF S+HTILE+ SWTRFQP
Sbjct: 604 LKLELNTPAAYQIRYAGYKGVVACWPSKGDGIRLSLRRSMNKFLSNHTILEICSWTRFQP 663
Query: 1736 GFLNRQILTLLSALGVPDIVFLKMQESMVCKLNQILENTDVAFEVLTTSCSEQGNSAAIM 1557
GFLNRQI+TLLSAL VPD VF MQE MV KLNQ+L +++VAF+VLT+SC+EQGN AAIM
Sbjct: 664 GFLNRQIVTLLSALKVPDEVFWDMQEKMVYKLNQMLVDSEVAFDVLTSSCAEQGNIAAIM 723
Query: 1556 LSAGFKPQTEPHLRGMLSCIRSAQLVDLSAKTRIFVPMGRWLMGCLDELGELEHGQCFIQ 1377
LSAGF+PQ+EPHLRGML CIR+AQL DL K RIFVP GRWLMGCLDE G LE GQCFIQ
Sbjct: 724 LSAGFRPQSEPHLRGMLMCIRAAQLWDLREKARIFVPSGRWLMGCLDEGGVLEQGQCFIQ 783
Query: 1376 TSLPSLENCFAKHGSRFSWT-KNVKVITGKVIIAKNPCLHPGDIRILDAVDVPGLHHLVD 1200
S P+LENCF KHG RFS T KN +VI G V++AKNPCLHPGD+RIL+AVD P LHHL D
Sbjct: 784 VSSPALENCFIKHGLRFSETKKNRQVIKGYVVVAKNPCLHPGDVRILEAVDAPDLHHLYD 843
Query: 1199 CLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLVPPSKRSWPPMDYKPAAVKELKKPVT 1020
CLVFPQKG RPHT+EASGSDLDGDLYFVTW+E+L+PPSK+SW PMDY A ++L + VT
Sbjct: 844 CLVFPQKGARPHTNEASGSDLDGDLYFVTWEEDLIPPSKKSWTPMDYDSAEEQKLPRDVT 903
Query: 1019 QQDIIEFFTKNMVTENLGVICNAHVVHADLSEQGALDEKCLELAELAAIAVDFPKTGKSA 840
Q+DII+FF K++V+E+LG ICNAHVVHAD SE GALDE C+ LAELAA AVDFPKTGK
Sbjct: 904 QKDIIDFFVKHIVSESLGTICNAHVVHADRSEHGALDENCIHLAELAATAVDFPKTGKLV 963
Query: 839 TMPYSLKPKLYPDFMGKDEFQSYKSKKVLGQLYRKIIDFQGDNEGSEEVTYLPEDVPYDT 660
TMP LKPK YPDFMGK E Q+YKS K+LG+LYR+I D ++ S E++ LPEDVPYDT
Sbjct: 964 TMPRHLKPKQYPDFMGKAEHQTYKSTKILGRLYRQIKDACDEDLNSSELS-LPEDVPYDT 1022
Query: 659 DLEIPGSDYFVADAWSSKCTYDGQLNALLGHYKVSTEEEAVTGHVWSMPKYNSRKLGDLK 480
LE+PG+ F++ AW KC+YDGQL+ LLG YKV+ EEE VTGHVWSMPKY SRK G+LK
Sbjct: 1023 SLEVPGAADFISKAWDHKCSYDGQLSGLLGQYKVNNEEELVTGHVWSMPKYASRKQGELK 1082
Query: 479 EKLKHAYTALHREFRHSFEAMGPDFKMLTDDEKNLLYEQKASAWYCVTYHPRWVKKSVQL 300
EKLK++YTAL +EFR FE + D + L+D+E+NLLYE+KASAWY VTYHP WVKKSV L
Sbjct: 1083 EKLKYSYTALRKEFREIFERLDSDSESLSDEERNLLYERKASAWYQVTYHPDWVKKSVDL 1142
Query: 299 GEPEGDGV-PVRLSFAWIAVDYLVRIKIRCQGVKKFDTCKPIDSLANYLADKI 144
+ + G + LSFAWIA D+L RIKIR Q D+ KPI+SL Y+AD+I
Sbjct: 1143 RQDDDGGTSALMLSFAWIATDFLARIKIRNQRGGNLDSAKPINSLFEYIADRI 1195