BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00005568
         (337 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A...   105   2e-20
ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II su...   104   2e-20
ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su...   103   3e-20
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor...   103   3e-20
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su...   103   4e-20
ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II su...   103   4e-20
ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II su...   103   4e-20
gb|KDP23744.1| hypothetical protein JCGZ_23577 [Jatropha curcas]      103   4e-20
gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [...   103   4e-20
gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [...   103   4e-20
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu...   103   4e-20
ref|XP_012838496.1| PREDICTED: DNA-directed RNA polymerase II su...   103   4e-20
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr...   103   4e-20
ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citr...   103   4e-20
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps...   103   4e-20
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   103   4e-20
ref|XP_010271756.1| PREDICTED: DNA-directed RNA polymerase II su...   103   6e-20
ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II su...   102   8e-20
ref|XP_008813029.1| PREDICTED: DNA-directed RNA polymerase II su...   102   1e-19
ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II su...   102   1e-19

>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
          Length = 138

 Score =  105 bits (261), Expect = 2e-20
 Identities = 48/59 (81%), Positives = 58/59 (98%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           +LSR++LAEFELCVLGNLCPETVEEA+AMVPS+KS+GR HDD+A+EKML+D+SLIKKFE
Sbjct: 80  LLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHDDEAIEKMLNDMSLIKKFE 138


>ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
           guineensis]
          Length = 138

 Score =  104 bits (260), Expect = 2e-20
 Identities = 50/59 (84%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+KS+GR H+DDA+EKML+DLSLIKKFE
Sbjct: 80  ILSRYRLAEFELCVLGNLCPETVEEAIAMVPSIKSKGRIHEDDAIEKMLNDLSLIKKFE 138


>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
           raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Gossypium
           raimondii] gi|763770918|gb|KJB38133.1| hypothetical
           protein B456_006G238100 [Gossypium raimondii]
           gi|763804330|gb|KJB71268.1| hypothetical protein
           B456_011G113800 [Gossypium raimondii]
           gi|763804331|gb|KJB71269.1| hypothetical protein
           B456_011G113800 [Gossypium raimondii]
          Length = 138

 Score =  103 bits (258), Expect = 3e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDDDA+E+ML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 138


>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|590707933|ref|XP_007048136.1| RNA polymerase II,
           Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
           gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
          Length = 138

 Score =  103 bits (258), Expect = 3e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDDDA+E+ML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKKFE 138


>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
           curcas]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138


>ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Sesamum
           indicum]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 138


>ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Sesamum
           indicum] gi|747083277|ref|XP_011088998.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Sesamum
           indicum]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 138


>gb|KDP23744.1| hypothetical protein JCGZ_23577 [Jatropha curcas]
          Length = 164

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 106 ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 164


>gb|KDO59899.1| hypothetical protein CISIN_1g0325681mg, partial [Citrus sinensis]
          Length = 59

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 1   ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 59


>gb|KDO37892.1| hypothetical protein CISIN_1g0424881mg, partial [Citrus sinensis]
          Length = 61

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 3   ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 61


>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Populus euphratica]
           gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Populus euphratica]
           gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Populus euphratica]
           gi|222853507|gb|EEE91054.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| hypothetical protein
           POPTR_0005s08690g [Populus trichocarpa]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138


>ref|XP_012838496.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Erythranthe
           guttatus] gi|604331155|gb|EYU36013.1| hypothetical
           protein MIMGU_mgv1a015994mg [Erythranthe guttata]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 48/59 (81%), Positives = 58/59 (98%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR++LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+E+ML+DLSLIKKFE
Sbjct: 80  ILSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIERMLNDLSLIKKFE 138


>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
           gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4-like isoform X2 [Citrus
           sinensis] gi|557530000|gb|ESR41250.1| hypothetical
           protein CICLE_v10026735mg [Citrus clementina]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 138


>ref|XP_006428009.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
           gi|557529999|gb|ESR41249.1| hypothetical protein
           CICLE_v10026735mg [Citrus clementina]
          Length = 114

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 56  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 114


>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
           gi|482557570|gb|EOA21762.1| hypothetical protein
           CARUB_v10002229mg [Capsella rubella]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 48/59 (81%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR++L EFELCVLGNLCPETVEEA+AMVPSLK++GR HDDDA+EKML+DLSL+K+FE
Sbjct: 80  ILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDDAIEKMLNDLSLVKRFE 138


>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
           vinifera] gi|731409111|ref|XP_010657077.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  103 bits (257), Expect = 4e-20
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HDD+A+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138


>ref|XP_010271756.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Nelumbo
           nucifera]
          Length = 138

 Score =  103 bits (256), Expect = 6e-20
 Identities = 48/59 (81%), Positives = 57/59 (96%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR+KLAEFELCVLGNLCPETVEEALAMVPS+K++GR H+D+ ++KML+DLSLIKKFE
Sbjct: 80  ILSRHKLAEFELCVLGNLCPETVEEALAMVPSIKTRGRTHEDEEIDKMLNDLSLIKKFE 138


>ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Musa acuminata
           subsp. malaccensis]
          Length = 138

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           +LSR KLAEFELCVLGNLCPETVEEA+A+VPS+KS+GR  +DDA+EKMLHDLSLIKKFE
Sbjct: 80  VLSRYKLAEFELCVLGNLCPETVEEAIAIVPSIKSKGRMLEDDAIEKMLHDLSLIKKFE 138


>ref|XP_008813029.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X2
           [Phoenix dactylifera]
          Length = 114

 Score =  102 bits (254), Expect = 1e-19
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K +GR H+DDA+EKML+DLSLIKKFE
Sbjct: 56  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKRKGRIHEDDAIEKMLNDLSLIKKFE 114


>ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
           [Phoenix dactylifera]
          Length = 138

 Score =  102 bits (254), Expect = 1e-19
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -1

Query: 337 ILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSQGRNHDDDAVEKMLHDLSLIKKFE 161
           ILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K +GR H+DDA+EKML+DLSLIKKFE
Sbjct: 80  ILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKRKGRIHEDDAIEKMLNDLSLIKKFE 138