BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00004831
         (2279 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...   630   e-177
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...   629   e-177
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   629   e-177
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   624   e-176
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   623   e-175
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   619   e-174
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   616   e-173
gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glyc...   615   e-173
gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sin...   615   e-173
gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glyc...   615   e-173
gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glyc...   615   e-173
ref|XP_004505022.1| PREDICTED: protein RTF1 homolog [Cicer ariet...   613   e-172
ref|XP_011027887.1| PREDICTED: RNA polymerase-associated protein...   611   e-172
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   609   e-171
ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein...   585   e-164
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   584   e-164
ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein...   582   e-163
ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein...   546   e-152
ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like ...   545   e-152
ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein...   543   e-151

>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
            vinifera]
          Length = 658

 Score =  630 bits (1624), Expect = e-177
 Identities = 370/667 (55%), Positives = 430/667 (64%), Gaps = 5/667 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG+ GR +HS P S+R RE                    +++RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       +L 
Sbjct: 61   GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSD---LYKNEDDRQQLA 117

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVNK 1633
             +TELEREMIL++RA KK D++L +K R   S   K+ T+SRKE  P  L+RG RSS   
Sbjct: 118  QLTELEREMILTDRATKKTDKKLHEKLR---SKRGKEKTQSRKESPPLQLSRGVRSSARS 174

Query: 1632 SNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXX 1459
            +++   + DALNELRAKR K QD E  R+                   R           
Sbjct: 175  ADRAAAKDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAASLSSSS 234

Query: 1458 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFE 1279
                                         + S VP +E+I+ ITIRRSKLAKWFMEPFFE
Sbjct: 235  QSESDGGSRSEDEGSTGDGAMVDSDDDRGIGSDVPTFEDIKSITIRRSKLAKWFMEPFFE 294

Query: 1278 ELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAA 1099
            ELIVGCFVRVGIG      IYRLCMVR+VDASDP++ Y+LEN+TT+KYLN  WGNE+++A
Sbjct: 295  ELIVGCFVRVGIGKSRSGPIYRLCMVRNVDASDPDRHYQLENKTTYKYLNCVWGNENSSA 354

Query: 1098 NWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQM 919
             WQMA VSDS PL EEF++W +EVERSG RM + Q++ +KREAI+KTN FVYSAAT KQM
Sbjct: 355  RWQMAMVSDSGPLMEEFNQWVKEVERSGSRMLTKQDILEKREAIQKTNMFVYSAATGKQM 414

Query: 918  LQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKA 739
            LQEKKS SS+P N+ AEKDRLRREMEVA S+ D AEVERI  RLQ+LEASR++K+KD+KA
Sbjct: 415  LQEKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEASRRSKEKDAKA 474

Query: 738  VRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXX 559
            +RLAEMNRKNRAENFKNASE K VNTSLKAGEAGYDPFSRRWTRSRNYYVSKP       
Sbjct: 475  IRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP-GGGDEA 533

Query: 558  XXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTEL 379
                        +G G +NG G G  +E               AGKLVDTSAP+D GTE 
Sbjct: 534  AAVANGEAPAAFVGAG-SNGTG-GKGAEVGVAATAAALEAAADAGKLVDTSAPVDQGTES 591

Query: 378  NSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDY 199
            N+ HDFELPISLAGLQK+GGPQGA +GFMARKQRIEAT+G RVPENDGRRHALTLTV DY
Sbjct: 592  NTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDY 651

Query: 198  KRRRGLL 178
            KRRRGLL
Sbjct: 652  KRRRGLL 658


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
            curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
            JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  629 bits (1623), Expect = e-177
 Identities = 363/667 (54%), Positives = 430/667 (64%), Gaps = 5/667 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTGS GR +++ P S+R RE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR +  ER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDD-LYKDEDDRRKLA 119

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVNK 1633
             M+ELEREMILSERADKK D+ L ++ R  S    ++ TRSRKE  P   +RG R+S   
Sbjct: 120  QMSELEREMILSERADKKGDKNLTERIR--SKRDSERATRSRKETPPLPSSRGVRTSARS 177

Query: 1632 SNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXX 1459
            +++   + DALNELRAK + +Q      R                   RK          
Sbjct: 178  ADRAAAKDDALNELRAK-RLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSS 236

Query: 1458 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFE 1279
                                           S    Y++IR++TIRRSKLAKW MEP+FE
Sbjct: 237  SSESDSRSHSEDEASTGDGGMADSDEDREPGSEGLTYDDIREVTIRRSKLAKWLMEPWFE 296

Query: 1278 ELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAA 1099
            ELIVGCFVRVGIG      IYRLC+VR+VDA+DP++PYKLEN+TT+KYLNV WGNES+AA
Sbjct: 297  ELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAA 356

Query: 1098 NWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQM 919
             WQMA VSDS P E+E+ +W REVERSGGRMP+ Q++ +K+EAI+K+NTFVYSAATVKQM
Sbjct: 357  RWQMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQM 416

Query: 918  LQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKA 739
            LQEKKSAS++P NVAAEKDRLRRE+EVAQ ++DDAEVERIRAR+QELEASRQA++KD+KA
Sbjct: 417  LQEKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKA 476

Query: 738  VRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXX 559
            +RLAEMNRKNRAENF+NASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP       
Sbjct: 477  IRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP-----GG 531

Query: 558  XXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTEL 379
                             +NG   G L+E               AGKLVDT+AP+D GTE 
Sbjct: 532  ADVAAEANNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTES 591

Query: 378  NSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDY 199
            N+ HDF+LPISL  L+K+GG +GA +GFMARKQ+IEAT+G RVPENDGRRHALTLTVSDY
Sbjct: 592  NTLHDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDY 651

Query: 198  KRRRGLL 178
            KRRRGLL
Sbjct: 652  KRRRGLL 658


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  629 bits (1621), Expect = e-177
 Identities = 361/665 (54%), Positives = 423/665 (63%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG+ GR +HS P S+R  +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKVAVPRKQSPPMSSSRMRASARSA 176

Query: 1629 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1453
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1273
                                         S  P ++++++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEEL 296

Query: 1272 IVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1093
            IVGCFVRVGIG      IYRLCMV++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1092 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 913
            QMA VSDS PLEEEF +W +EV+RSGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 912  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 733
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RL ELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALK 476

Query: 732  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 553
            LAEMNRKNR ENFKNASE+KPVNT LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKP-----GEKA 531

Query: 552  XXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 373
                      +    +NG GA   +E               AGKLVDTSAP+D GTE N 
Sbjct: 532  AAGNNSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNM 591

Query: 372  QHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYKR 193
             H+FELPISLA LQK+GG QGA +GFMARKQ+IEAT+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 592  LHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKR 651

Query: 192  RRGLL 178
            RRGLL
Sbjct: 652  RRGLL 656


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  624 bits (1610), Expect = e-176
 Identities = 360/665 (54%), Positives = 420/665 (63%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG+ GR +HS P S+R  +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1629 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1453
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSE 236

Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1273
                                         S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1272 IVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1093
            IVGCFVRVGIG      IYRLCMV++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1092 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 913
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 912  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 733
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 732  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 553
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP-----GEKA 531

Query: 552  XXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 373
                      +    +N  GA   +E               AGKLVDTSAP+D GTE N 
Sbjct: 532  AAGNNIVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNM 591

Query: 372  QHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYKR 193
             H+FELPISLA LQKYGG  GA +GFMARKQRIE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 592  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 651

Query: 192  RRGLL 178
            RRGLL
Sbjct: 652  RRGLL 656


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  623 bits (1607), Expect = e-175
 Identities = 361/665 (54%), Positives = 424/665 (63%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTG-SGRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG SGR +HS P S+R  +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + +ER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDD-LYKDEDDRRKLS 119

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             MTEL+REMILS+RA KK+D+ L  K   AS   + K +  RK+  P   +R R+S   +
Sbjct: 120  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKVSVPRKQSPPMSSSRMRASARSA 177

Query: 1629 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1453
            ++  K DALNELRAKR KQQD E  R+                                 
Sbjct: 178  DRSAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSE 237

Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1273
                                         S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 238  SESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 297

Query: 1272 IVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1093
            IVGCFVRVGIG      IYRLCMV++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 298  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 357

Query: 1092 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 913
            QMA VSDS PLEEEF +W +EV+RSGGRMP+ Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 358  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQ 417

Query: 912  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 733
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEV+RI+ARLQELEASR AK KD+KA++
Sbjct: 418  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALK 477

Query: 732  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 553
            LAEMNRKNR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYY  +          
Sbjct: 478  LAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGE-------KAA 530

Query: 552  XXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 373
                       GPG TN  GA   +E               AGKLVDTSAP+D GTE N 
Sbjct: 531  AGNNSVNGIVAGPG-TNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNM 589

Query: 372  QHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYKR 193
             H+FELPISLA LQKYGG QGA +GFMARKQRIE+T+GFRV ENDGRRH+LTL+VSDYKR
Sbjct: 590  LHNFELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKR 649

Query: 192  RRGLL 178
            RRGLL
Sbjct: 650  RRGLL 654


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  619 bits (1596), Expect = e-174
 Identities = 365/666 (54%), Positives = 414/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPVFTNRKPSV 1987
            MADLENLLLEAAGRT S GR +HS   SKR RE                   + +RKPS 
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG-YGSRKPSG 59

Query: 1986 SQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLES 1807
            SQVPLKKR +  ER                                              
Sbjct: 60   SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHG------------Q 107

Query: 1806 MTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSP-PLLARGRSSVNKS 1630
            MTELEREM++ ER DKK D+ L+ K R   S  E+++TRS KE  P P     R +   +
Sbjct: 108  MTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLAARSA 164

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1456
            ++   + DALNELRAKR KQQD E  RR                   +            
Sbjct: 165  DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224

Query: 1455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1276
                                          S  P Y++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 225  SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284

Query: 1275 LIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1096
            LIVGCFVRVGIG      IYRLCMVR+VDA++P++ YKLENRTT KYLNV WGNES+AA 
Sbjct: 285  LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344

Query: 1095 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 916
            WQMA VSDSPPLEEEF +W REVER+GGRMPS Q+V +K+E+I+K NTFVYSAATVKQML
Sbjct: 345  WQMAMVSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQML 404

Query: 915  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 736
            QEKKSASS+P NVAAEKDRLRRE+EVAQSR DD ++ERI+ RLQELEASR +K KD+KA+
Sbjct: 405  QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAI 464

Query: 735  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 556
            RLAEMNRKNR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP        
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 555  XXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 376
                         PG  NG   G   E               AGKLVDT+APLD GTE N
Sbjct: 525  NGDKNGV------PGGANG-EEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577

Query: 375  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYK 196
              HDFEL ISL  L+K+GGPQG  +GFMARKQRIEAT+G +VPENDGRRHALTLTV DYK
Sbjct: 578  MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637

Query: 195  RRRGLL 178
            RRRGLL
Sbjct: 638  RRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  616 bits (1588), Expect = e-173
 Identities = 363/666 (54%), Positives = 414/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPVFTNRKPSV 1987
            MADLENLLLEAAGRT S GR +HS   SKR RE                   + +RKPS 
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG-YGSRKPSG 59

Query: 1986 SQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLES 1807
            SQVPLKKR + TER                                              
Sbjct: 60   SQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHG------------Q 107

Query: 1806 MTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSP-PLLARGRSSVNKS 1630
            MTELEREM++ ER DKK D+ L+ K R   S  E+++TRS KE  P P     R +   +
Sbjct: 108  MTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLAARSA 164

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1456
            ++   + DALNELRAKR KQQD E  RR                   +            
Sbjct: 165  DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224

Query: 1455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1276
                                          S  P Y++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 225  SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284

Query: 1275 LIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1096
            LIVGCFVRVGIG      IYRLCMVR+VDA++P++ YKLENRTT KYLNV WGNES+AA 
Sbjct: 285  LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344

Query: 1095 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 916
            WQMA VSDSPPLEEEF +W REVER+ GRMPS Q+V +K+++I+K NTFVYSAATVKQML
Sbjct: 345  WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQML 404

Query: 915  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 736
            QEKKSASS+P NVAAEKDRLRRE+EVAQSR D+ ++ERI+ RLQELEASR +K KD+KA+
Sbjct: 405  QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464

Query: 735  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 556
            RLAEMNRKNR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP        
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 555  XXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 376
                         PG  NG   G   E               AGKLVDT+APLD GTE N
Sbjct: 525  NGDKNGV------PGGANG-EEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577

Query: 375  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYK 196
              HDFEL ISL  L+K+GGPQG  +GFMARKQRIEAT+G +VPENDGRRHALTLTV DYK
Sbjct: 578  MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637

Query: 195  RRRGLL 178
            RRRGLL
Sbjct: 638  RRRGLL 643


>gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  615 bits (1586), Expect = e-173
 Identities = 357/665 (53%), Positives = 416/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG+ GR +HS P S+R  +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1629 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1453
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1273
                                         S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1272 IVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1093
            IVGCFVRVGIG      IYRLCMV++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1092 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 913
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 912  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 733
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 732  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 553
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP-----GEKA 531

Query: 552  XXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 373
                      +    +NG GA    E                   VDTSAP+D GTE N 
Sbjct: 532  AAGNNIVNGNVAGAGSNGTGAPVTVE----------AGMVAIAAAVDTSAPVDQGTESNM 581

Query: 372  QHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYKR 193
             H+FELPISLA LQKYGG  GA +GFMARKQRIE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 582  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 641

Query: 192  RRGLL 178
            RRGLL
Sbjct: 642  RRGLL 646


>gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sinensis]
            gi|641828832|gb|KDO47970.1| hypothetical protein
            CISIN_1g006477mg [Citrus sinensis]
          Length = 643

 Score =  615 bits (1586), Expect = e-173
 Identities = 363/666 (54%), Positives = 413/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPVFTNRKPSV 1987
            MADLENLLLEAAGRT S GR +HS   SKR RE                   + +RKPS 
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG-YGSRKPSG 59

Query: 1986 SQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLES 1807
            SQVPLKKR +  ER                                              
Sbjct: 60   SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHG------------Q 107

Query: 1806 MTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSP-PLLARGRSSVNKS 1630
            MTELEREM++ ER DKK D+ L+ K R   S  E+++TRS KE  P P     R +   +
Sbjct: 108  MTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLAARSA 164

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1456
            ++   + DALNELRAKR KQQD E  RR                   +            
Sbjct: 165  DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224

Query: 1455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1276
                                          S  P Y++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 225  SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284

Query: 1275 LIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1096
            LIVGCFVRVGIG      IYRLCMVR+VDA++P++ YKLENRTT KYLNV WGNES+AA 
Sbjct: 285  LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344

Query: 1095 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 916
            WQMA VSDSPPLEEEF +W REVER+ GRMPS Q+V +K+E+I+K NTFVYSAATVKQML
Sbjct: 345  WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQML 404

Query: 915  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 736
            QEKKSASS+P NVAAEKDRLRRE+EVAQSR D+ ++ERI+ RLQELEASR +K KD+KA+
Sbjct: 405  QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464

Query: 735  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 556
            RLAEMNRKNR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP        
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 555  XXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 376
                         PG  NG   G   E               AGKLVDT+APLD GTE N
Sbjct: 525  NGDKNGV------PGGANG-EEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577

Query: 375  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYK 196
              HDFEL ISL  L+K+GGPQG  +GFMARKQRIEAT+G +VPENDGRRHALTLTV DYK
Sbjct: 578  MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637

Query: 195  RRRGLL 178
            RRRGLL
Sbjct: 638  RRRGLL 643


>gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  615 bits (1585), Expect = e-173
 Identities = 357/665 (53%), Positives = 416/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG+ GR +HS P S+R  +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1629 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1453
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSE 236

Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1273
                                         S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1272 IVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1093
            IVGCFVRVGIG      IYRLCMV++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1092 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 913
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 912  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 733
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 732  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 553
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP-----GEKA 531

Query: 552  XXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 373
                      +    +NG GA    E                   VDTSAP+D GTE N 
Sbjct: 532  AAGNNIVNGNVAGAGSNGTGAPVTVE----------AGMVAIAAAVDTSAPVDQGTESNM 581

Query: 372  QHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYKR 193
             H+FELPISLA LQKYGG  GA +GFMARKQRIE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 582  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 641

Query: 192  RRGLL 178
            RRGLL
Sbjct: 642  RRGLL 646


>gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  615 bits (1585), Expect = e-173
 Identities = 357/665 (53%), Positives = 416/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRTG+ GR +HS P S+R  +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRNDHDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1629 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1453
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1273
                                         S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1272 IVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1093
            IVGCFVRVGIG      IYRLCMV++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1092 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 913
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 912  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 733
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 732  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 553
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP-----GEKA 531

Query: 552  XXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 373
                      +    +NG GA    E                   VDTSAP+D GTE N 
Sbjct: 532  AAGNNIVNGNVAGAGSNGTGAPVTVE----------AGMVAIAAAVDTSAPVDQGTESNM 581

Query: 372  QHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYKR 193
             H+FELPISLA LQKYGG  GA +GFMARKQRIE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 582  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 641

Query: 192  RRGLL 178
            RRGLL
Sbjct: 642  RRGLL 646


>ref|XP_004505022.1| PREDICTED: protein RTF1 homolog [Cicer arietinum]
            gi|502142571|ref|XP_004505023.1| PREDICTED: protein RTF1
            homolog [Cicer arietinum]
          Length = 658

 Score =  613 bits (1582), Expect = e-172
 Identities = 356/666 (53%), Positives = 418/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTG--SGRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKP 1993
            MADLENLLLEAAGRTG  +GR +HS P S+R R+                  + + +RKP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 1992 SVSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKL 1813
            S SQVPLKKR + TER                                 LY       KL
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDD-LYKDEDDRRKL 119

Query: 1812 ESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNK 1633
              M+EL+REMILS+RA KK+D+ L  K   AS   + K   + K+  P   +R R+S   
Sbjct: 120  SEMSELQREMILSDRASKKDDKSLLGKI--ASKREKGKAIMTGKQSPPLSSSRMRASARS 177

Query: 1632 SNKPQKD-ALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1456
            +++  K+ ALNELRAKR KQQD E  RR                                
Sbjct: 178  ADRSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHS 237

Query: 1455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1276
                                          S  P +++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 238  DSDSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEE 297

Query: 1275 LIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1096
            LIVGCFVRVGIG      IYRLCMV++VD+SDP++ YKLENRTTHKYLNV WGNES+AA 
Sbjct: 298  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAAR 357

Query: 1095 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 916
            WQMA VSDS PLEEEF +W +EVERSGGRMP+ Q+V +K++AI+K  TFVYSA TVKQML
Sbjct: 358  WQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQML 417

Query: 915  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 736
            QEKKS+SS+P NVAAEKDRLRREME+AQS+ D+AEVERI+ R+QELEASR AK KD+KA+
Sbjct: 418  QEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKAL 477

Query: 735  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 556
            +LAEMNRKNR ENFKNASEL+PVN  LKAGEAGYDPFSRRWTRSRNYYV+KP        
Sbjct: 478  KLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKP-----GEK 532

Query: 555  XXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 376
                       +    +N  G    +E               AGKLVDTSAP+D GTE N
Sbjct: 533  AAARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESN 592

Query: 375  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSDYK 196
              H+FELPISLA L KYGG QGA +GFMARKQR+EAT+GFRV ENDGRRH LTL+V DYK
Sbjct: 593  FLHNFELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYK 652

Query: 195  RRRGLL 178
            RRRGLL
Sbjct: 653  RRRGLL 658


>ref|XP_011027887.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Populus
            euphratica]
          Length = 662

 Score =  611 bits (1576), Expect = e-172
 Identities = 355/668 (53%), Positives = 422/668 (63%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTG-SGRKQHS-RPQSKRLREXXXXXXXXXXXXXXXXGP-VFTNRKP 1993
            MADLENLLLEAAGRTG SGR ++S  P  +R RE                    + NRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRAYANRKP 60

Query: 1992 SVSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKL 1813
            S SQVPLKKR E+ ER                                 LY       KL
Sbjct: 61   SGSQVPLKKRLETNERDEEEGSQDEGDYDGGGSDREGGSSDESDIGDD-LYKDEDDRKKL 119

Query: 1812 ESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVN 1636
              M+EL+RE+IL++RADKK D+ L +K R        K TRSRKE  P    RG RSS  
Sbjct: 120  AQMSELDRELILADRADKKGDKHLTEKIR--LKRDNDKPTRSRKETPPLPSTRGVRSSAR 177

Query: 1635 KSNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXX 1462
             +++   + DALNELRA ++ +Q      R                   +          
Sbjct: 178  SADRAAAKDDALNELRA-KRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSS 236

Query: 1461 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFF 1282
                                            S  P YE+I++ITIRR+KLAKWFMEP+F
Sbjct: 237  SSSESGSRSHSEDEGSTGDGGMADSDEDVEPGSQGPTYEDIKEITIRRTKLAKWFMEPWF 296

Query: 1281 EELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1102
            EELI+GCFVRVGIG      +YRLCMVR+VDA++P+KPYKLEN++T+KYLNV WG +++A
Sbjct: 297  EELIIGCFVRVGIGRSRSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSA 356

Query: 1101 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 922
            A WQMA VSDS P EEE+ +W REVE  GGR+PS Q++ +K+EAI K+NTFVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQ 416

Query: 921  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 742
            MLQEKKSASS+P NVAAEKDRLRRE+E+AQS+ D+AEVERI AR++ELEASRQAK KD+K
Sbjct: 417  MLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRQAKVKDAK 476

Query: 741  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 562
            A+RLAEMNRKNR ENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYVSKP      
Sbjct: 477  AIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKP--AEAD 534

Query: 561  XXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 382
                        A+   A+N + AG +SE               AGKLVDTSAP+D GTE
Sbjct: 535  DPDATKISEANEAVAVAASNQVVAGVMSEAGVAATAAALEAAADAGKLVDTSAPVDQGTE 594

Query: 381  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSD 202
             N+ H FE+ ISL  LQ++GGPQGA +GFMARKQRIEAT+G RVPENDGRRHALTLTV D
Sbjct: 595  SNTMHSFEIEISLTALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGD 654

Query: 201  YKRRRGLL 178
            YKRRRGLL
Sbjct: 655  YKRRRGLL 662


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  609 bits (1571), Expect = e-171
 Identities = 354/668 (52%), Positives = 421/668 (63%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTG-SGRKQHS-RPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKP 1993
            MADLENLLLEAAGRTG SGR ++S  P  +R RE                    + NRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 1992 SVSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKL 1813
            S SQVPLKKR E+ ER                                 LY       KL
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDD-LYKDEDDRKKL 119

Query: 1812 ESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVN 1636
              M+EL+RE+IL++RADKK D+ L +K R        K TRSRKE  P   +RG RSS  
Sbjct: 120  AQMSELDRELILADRADKKGDKHLTEKIR--LKRDNDKPTRSRKETPPLPSSRGVRSSAR 177

Query: 1635 KSNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXX 1462
             +++   + DALNELRA ++ +Q      R                   +          
Sbjct: 178  SADRAAAKDDALNELRA-KRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSS 236

Query: 1461 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFF 1282
                                            S  P YE+I++ITIRR+KLAKWFMEP+F
Sbjct: 237  SSSESGSRSHSEDEGSTGDGGMADSDEDVEPGSKGPTYEDIKEITIRRTKLAKWFMEPWF 296

Query: 1281 EELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1102
            EELI+GCFVRVGIG      +YRLCMVR+VDA++P+KPYKLEN++T+KYLNV WG +++A
Sbjct: 297  EELIIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSA 356

Query: 1101 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 922
            A WQMA VSDS P EEE+ +W REVE  GGR+PS Q++ +K+EAI K+NTFVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQ 416

Query: 921  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 742
            MLQEKKSASS+P NVAAEKDRLRRE+E+AQS+ D+AEVERI AR++ELEASR AK KD+K
Sbjct: 417  MLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAK 476

Query: 741  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 562
            A+RLAEMNRKNR ENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYVSKP      
Sbjct: 477  AIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKP--AEAD 534

Query: 561  XXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 382
                         +   A+N + AG +SE               AGKLVDTSAP+D GTE
Sbjct: 535  DPVATKISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTE 594

Query: 381  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSD 202
             N+ H FEL ISL  LQ++GGPQGA +GFMARKQRIEAT+G RVPENDGRRHALTLTV D
Sbjct: 595  SNTMHSFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGD 654

Query: 201  YKRRRGLL 178
            YKRRRGLL
Sbjct: 655  YKRRRGLL 662


>ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            melo] gi|659107574|ref|XP_008453743.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis melo]
          Length = 660

 Score =  585 bits (1509), Expect = e-164
 Identities = 347/668 (51%), Positives = 417/668 (62%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGSGR-KQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRT +G   +HS P S+R RE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDD-LYKDDDDRRKLA 119

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             M+EL+REMILS+RA KKND+ L +  R  + + + KT  SRKE  P   +R RSS   +
Sbjct: 120  GMSELQREMILSDRASKKNDKHLYESLR--AKMDKGKTAPSRKETPPLPSSRIRSSARSA 177

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1456
            ++   + DALNELRA ++ +Q      R                   RKP          
Sbjct: 178  DRAAAKDDALNELRA-KRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSS 236

Query: 1455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXV--NSSVPKYENIRDITIRRSKLAKWFMEPFF 1282
                                            S  P +E+I++ITIRRSKLAKW MEPFF
Sbjct: 237  QSESESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFF 296

Query: 1281 EELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1102
            EELIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLEN+ THKYLNV WGNE++A
Sbjct: 297  EELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSA 356

Query: 1101 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 922
            A WQMA VSDS PLE+E+ +W +EVER+GGRM S Q+V +K++AI+K N FVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQ 416

Query: 921  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 742
            MLQ+KKSAS++P N+AAEKDRLRREM+VA S+ D+AEVERI+ RLQ+LEASR+ + KD+K
Sbjct: 417  MLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAK 476

Query: 741  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 562
            A+RLAEMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS        
Sbjct: 477  AIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGA 535

Query: 561  XXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 382
                        A+    T   GAG  S+               AGKLVDT+AP+DGGTE
Sbjct: 536  AEAAGNSDTVTPALESTRT---GAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTE 592

Query: 381  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSD 202
             NS H+FELPISLA LQK+GG  GA +GF+ARKQRIEAT+G +VPENDGRRHALTLTVSD
Sbjct: 593  SNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSD 652

Query: 201  YKRRRGLL 178
            YKRRRGLL
Sbjct: 653  YKRRRGLL 660


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|778690563|ref|XP_011653135.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|700198089|gb|KGN53247.1| hypothetical protein
            Csa_4G038650 [Cucumis sativus]
          Length = 660

 Score =  584 bits (1506), Expect = e-164
 Identities = 345/668 (51%), Positives = 417/668 (62%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MADLENLLLEAAGRT + GR +HS P S+R RE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDD-LYKDDDDRRKLA 119

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             M+EL+REMILS+RA KKND+ L +  R  + + + K+  SRKE  P   +R RSS   +
Sbjct: 120  GMSELQREMILSDRASKKNDKHLYESLR--AKMDKGKSAPSRKETPPLPSSRIRSSARSA 177

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1456
            ++   + DALNELRA ++ +Q      R                   RKP          
Sbjct: 178  DRAAAKDDALNELRA-KRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSS 236

Query: 1455 XXXXXXXXXXXXXXXXXXXXXXXXXXXXV--NSSVPKYENIRDITIRRSKLAKWFMEPFF 1282
                                            S  P +E+I+++TIRRSKLAKW MEPFF
Sbjct: 237  QSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFF 296

Query: 1281 EELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1102
            EELIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLEN+ THKYLNV WGNE++A
Sbjct: 297  EELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASA 356

Query: 1101 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 922
            A WQMA VSDS PLE+E+ +W +EVER+GGRM S Q++ +K+EAI+K N FVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQ 416

Query: 921  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 742
            MLQ+KKSAS++P N+AAEKDRLRREM+VA S+ D+AEVERI+ RLQ+LEASR+ + KD+K
Sbjct: 417  MLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAK 476

Query: 741  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 562
            A+RLAEMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS        
Sbjct: 477  AIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGA 535

Query: 561  XXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 382
                        A+    T    AG  S+               AGKLVDT+AP+DGGTE
Sbjct: 536  AEAAGNSDNVTPALENTRTE---AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTE 592

Query: 381  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGRRHALTLTVSD 202
             NS H+FELPISLA LQK+GG  GA +GF+ARKQRIEAT+G +VPENDGRRHALTLTVSD
Sbjct: 593  SNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSD 652

Query: 201  YKRRRGLL 178
            YKRRRGLL
Sbjct: 653  YKRRRGLL 660


>ref|XP_010241126.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nelumbo
            nucifera]
          Length = 666

 Score =  582 bits (1500), Expect = e-163
 Identities = 301/396 (76%), Positives = 333/396 (84%), Gaps = 2/396 (0%)
 Frame = -3

Query: 1359 VPKYENIRDITIRRSKLAKWFMEPFFEELIVGCFVRVGIGM-RSGRSIYRLCMVRHVDAS 1183
            VP +E I+ ITIRRSKLAKWFMEPFFEELIVGCFVRVGIGM RSG+SIYRLCMV++VDA+
Sbjct: 275  VPTFEEIKSITIRRSKLAKWFMEPFFEELIVGCFVRVGIGMSRSGQSIYRLCMVKNVDAT 334

Query: 1182 DPNKPYKLENRTTHKYLNVFWGNESTAANWQMARVSDSPPLEEEFDEWKREVERSGGRMP 1003
            DPNK YKLENRTT+KYLN  WGNES+AA WQMARVSDS PL EEF++W REVER GGRMP
Sbjct: 335  DPNKQYKLENRTTYKYLNCIWGNESSAARWQMARVSDSAPLVEEFNDWLREVERHGGRMP 394

Query: 1002 SIQEVTDKREAIEKTNTFVYSAATVKQMLQEKKSASSKPFNVAAEKDRLRREMEVAQSRR 823
            + Q+V++KREAI+KTNTFVYSAATVKQMLQEKK+ASS+P N+AAEK+RLRREMEVA+SRR
Sbjct: 395  TKQDVSEKREAIQKTNTFVYSAATVKQMLQEKKTASSRPLNIAAEKERLRREMEVAESRR 454

Query: 822  DDAEVERIRARLQELEA-SRQAKDKDSKAVRLAEMNRKNRAENFKNASELKPVNTSLKAG 646
            D+AEVERIRARLQELEA SRQAK+KDSKAVRLAEMN++NRAENFKNASELKPVNTSLKAG
Sbjct: 455  DEAEVERIRARLQELEAMSRQAKEKDSKAVRLAEMNKRNRAENFKNASELKPVNTSLKAG 514

Query: 645  EAGYDPFSRRWTRSRNYYVSKPXXXXXXXXXXXXXXXXXXAIGPGATNGIGAGPLSEXXX 466
            EAGYDPFSRRWTRSRNYYVSKP                       A++G GA   +E   
Sbjct: 515  EAGYDPFSRRWTRSRNYYVSKPGEGAPTANGEAAVASAVSV----ASSGTGARAAAEAGI 570

Query: 465  XXXXXXXXXXXXAGKLVDTSAPLDGGTELNSQHDFELPISLAGLQKYGGPQGAHSGFMAR 286
                        AGKLVDTSAP+D GTE NS HDFELPISLAGLQK+GGPQGAH GF+ R
Sbjct: 571  AATAAALEAAAGAGKLVDTSAPVDQGTESNSLHDFELPISLAGLQKFGGPQGAHLGFLGR 630

Query: 285  KQRIEATIGFRVPENDGRRHALTLTVSDYKRRRGLL 178
            KQRIEAT+G RVPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 631  KQRIEATVGCRVPENDGRRHSLTLTVSDYKRRRGLL 666



 Score =  103 bits (256), Expect = 8e-19
 Identities = 77/211 (36%), Positives = 98/211 (46%), Gaps = 7/211 (3%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXG----PVFTNR 1999
            MADLENLLLEAAGRTG  GR +HSRP   R R                      P ++ R
Sbjct: 1    MADLENLLLEAAGRTGGPGRNRHSRPPPSRRRRDDSYFDDGSDSKDDDDSDDDDPGYSGR 60

Query: 1998 KPSVSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYXXXXX 1825
            KPS SQVPLKKR ++ ++                                   LY     
Sbjct: 61   KPSGSQVPLKKRLDAHDKDDDRDSRDDDRDYDDDDDDEDRRAGSGDDSDVGSDLYKDDRD 120

Query: 1824 XXKLESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRS 1645
              +L +M+EL+RE ILSERA KK+D++L++  R        K T   KE  P +  R  S
Sbjct: 121  REELANMSELQREFILSERATKKDDKRLQEAVRARQG---GKKTDIMKETPPSVRVRSSS 177

Query: 1644 SVNKSNKPQKDALNELRAKRKKQQDSEGLRR 1552
                    + DALNELR KR+ +QD EG R+
Sbjct: 178  RYADKLAAKDDALNELRNKRRNKQDPEGHRK 208


>ref|XP_009378467.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
            bretschneideri]
          Length = 657

 Score =  546 bits (1408), Expect = e-152
 Identities = 276/391 (70%), Positives = 316/391 (80%)
 Frame = -3

Query: 1350 YENIRDITIRRSKLAKWFMEPFFEELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNK 1171
            +++I++ITIRRSKLAKWFMEPFFEELIVGCFVRVGIG     +IYRLCMVR+VDASDP++
Sbjct: 270  FDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVRNVDASDPDR 329

Query: 1170 PYKLENRTTHKYLNVFWGNESTAANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQE 991
             YKLEN+TTHKYLNV WGNE++AA WQMA +SDS PLEEEF +W REVERSGGR+PS ++
Sbjct: 330  QYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPLEEEFKQWIREVERSGGRLPSKED 389

Query: 990  VTDKREAIEKTNTFVYSAATVKQMLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAE 811
            V +K+EAI+KTN+FVYSAATVKQM+QEKKSASS+P N+A EKDRLRRE+EVA+S++DDAE
Sbjct: 390  VLEKKEAIKKTNSFVYSAATVKQMIQEKKSASSRPLNIALEKDRLRRELEVAKSKQDDAE 449

Query: 810  VERIRARLQELEASRQAKDKDSKAVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYD 631
            VERI+ RLQ+LEA RQ++ KDSKA+RLAEMNRKNR ENFKNASELKP N  LKAGEAGYD
Sbjct: 450  VERIQTRLQQLEARRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYD 509

Query: 630  PFSRRWTRSRNYYVSKPXXXXXXXXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXX 451
            PFSRRWTRSRNYYVSKP                   I    T  +GA             
Sbjct: 510  PFSRRWTRSRNYYVSKPGEQKEEAEAIAVADGALVDIESNGTAVVGA---VRAGMAATAA 566

Query: 450  XXXXXXXAGKLVDTSAPLDGGTELNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIE 271
                   AGKL+DTSAPLD GTE N +HDFELPISLA LQK+GGPQGA  GF+ARKQRIE
Sbjct: 567  ALEAAAGAGKLIDTSAPLDFGTESNLKHDFELPISLAALQKFGGPQGAQKGFLARKQRIE 626

Query: 270  ATIGFRVPENDGRRHALTLTVSDYKRRRGLL 178
            AT+G +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 627  ATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657



 Score =  105 bits (262), Expect = 2e-19
 Identities = 83/208 (39%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MA+LENLLLEAAGRT S G+ +HS   S+R R                     + +RKPS
Sbjct: 1    MAELENLLLEAAGRTSSSGKNRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
              QVPLKKR + TE                                 DLY       KL 
Sbjct: 61   GPQVPLKKRLDPTE--VDDEQGSQEEGGYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLA 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             M+EL+RE+ILSERA KK+D+ LK+K R      + K  +SRKE  P   +R RSS   +
Sbjct: 119  EMSELQRELILSERAQKKDDKSLKEKFR--PKWDKGKAPQSRKETPPLPSSRVRSSARSA 176

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRR 1552
            ++   + DALNELRAKR KQQD E  R+
Sbjct: 177  DRAAAKDDALNELRAKRLKQQDPEAHRK 204


>ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
            truncatula] gi|355500443|gb|AES81646.1| RNA
            polymerase-associated RTF1-like protein [Medicago
            truncatula]
          Length = 624

 Score =  545 bits (1405), Expect = e-152
 Identities = 308/558 (55%), Positives = 366/558 (65%), Gaps = 2/558 (0%)
 Frame = -3

Query: 1845 LYXXXXXXXKLESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPP 1666
            LY       KL  MTEL+REMILS+RA KK+D+ +  K         +K   SR+E  P 
Sbjct: 85   LYKDEDDRKKLSEMTELQREMILSDRAAKKDDKDILSKIAS----KREKGNVSRRETPPL 140

Query: 1665 LLARGRSSVNKSNKPQ-KD-ALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXR 1492
              +R  SS    ++   KD ALNELRAKR KQ+D E  R                     
Sbjct: 141  PSSRMMSSTRSYDRSAAKDGALNELRAKRLKQRDPETQRELKEGSKSAGSGVLSKIG--- 197

Query: 1491 KPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSK 1312
            KP                                           P +E+I+DITI RSK
Sbjct: 198  KPNFSSSSHSESESRSRSDEDVEGLSEGEGIIDSNDDKIMPGFEKPSFEDIQDITIPRSK 257

Query: 1311 LAKWFMEPFFEELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNKPYKLENRTTHKYL 1132
            L KWFMEPFFEELIVGCFVRVGIG      IYRLCMV++VDASDP++ YKL+N+TT+KYL
Sbjct: 258  LTKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRLYKLDNKTTYKYL 317

Query: 1131 NVFWGNESTAANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNT 952
            NV WGNE++AA WQMA VSDSPPLEEEF +W +EVERSGGRM    +V +K++A+ K N 
Sbjct: 318  NVVWGNETSAARWQMAMVSDSPPLEEEFKQWVKEVERSGGRMLKRLDVVEKKQAMLKINN 377

Query: 951  FVYSAATVKQMLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEA 772
            FVYSAATVKQML+EKKS S +P NVAAEKDRL+RE+E+A+S+ D A VE+I+ +LQELE 
Sbjct: 378  FVYSAATVKQMLEEKKSISRRPLNVAAEKDRLKRELEIAESKNDAAGVEKIQTKLQELEE 437

Query: 771  SRQAKDKDSKAVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYY 592
            SR++++KD+KA+RL+EMNRKNR ENFKNAS+LKPVN +LKAGEAGYDPFSRRWTRSRNYY
Sbjct: 438  SRKSREKDAKALRLSEMNRKNRVENFKNASDLKPVNKALKAGEAGYDPFSRRWTRSRNYY 497

Query: 591  VSKPXXXXXXXXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVD 412
             SKP                  A+G G +NGIGAG  +                AGKLVD
Sbjct: 498  NSKP-----AEEATAGNNTSGGAVGDGGSNGIGAGMAA------TTEALEAAAGAGKLVD 546

Query: 411  TSAPLDGGTELNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIEATIGFRVPENDGR 232
            T AP+D GTE N  HDFELPISLA LQK+GG +G  +GFMA+KQRIE  +GFRVPENDGR
Sbjct: 547  TRAPVDEGTESNVLHDFELPISLAMLQKFGGAKGVQAGFMAKKQRIEEVVGFRVPENDGR 606

Query: 231  RHALTLTVSDYKRRRGLL 178
            RH LTLTVSDYKRRRGLL
Sbjct: 607  RHQLTLTVSDYKRRRGLL 624


>ref|XP_009347098.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pyrus x
            bretschneideri]
          Length = 657

 Score =  543 bits (1400), Expect = e-151
 Identities = 274/391 (70%), Positives = 316/391 (80%)
 Frame = -3

Query: 1350 YENIRDITIRRSKLAKWFMEPFFEELIVGCFVRVGIGMRSGRSIYRLCMVRHVDASDPNK 1171
            +++I++ITIRRSKLAKWFMEPFFEELIVGCFVRVGIG     +IYRLCMVR+VDASDP++
Sbjct: 270  FDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVRNVDASDPDR 329

Query: 1170 PYKLENRTTHKYLNVFWGNESTAANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQE 991
             YKLEN+TTHKYLNV WGNE++AA WQMA +SDS PLEEEF +W REVERSGGR+PS ++
Sbjct: 330  QYKLENKTTHKYLNVVWGNENSAARWQMAMISDSAPLEEEFKQWIREVERSGGRLPSKED 389

Query: 990  VTDKREAIEKTNTFVYSAATVKQMLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAE 811
            V +K+EAI+KTN+FVYSAATVKQM+QEKKSASS+P N+A EKDRLRRE+EVA+S++DDAE
Sbjct: 390  VLEKKEAIKKTNSFVYSAATVKQMIQEKKSASSRPLNIALEKDRLRRELEVAKSKQDDAE 449

Query: 810  VERIRARLQELEASRQAKDKDSKAVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYD 631
            VERI+ RLQ+LEA RQ++ KDSKA+RLAEMNRKNR ENFKNASELKP N  LKAGEAGYD
Sbjct: 450  VERIQTRLQQLEARRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYD 509

Query: 630  PFSRRWTRSRNYYVSKPXXXXXXXXXXXXXXXXXXAIGPGATNGIGAGPLSEXXXXXXXX 451
            PFSRRWTRSRNYYVSKP                   I    T  +GA             
Sbjct: 510  PFSRRWTRSRNYYVSKPGEQKEEAEAIAVADGALADIESNGTAVVGA---VRAGMAATAA 566

Query: 450  XXXXXXXAGKLVDTSAPLDGGTELNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQRIE 271
                   AGKL+DTSAP+D GTE N +H+FELPISLA LQK+GGPQGA  GF+ARKQRIE
Sbjct: 567  ALEAAAGAGKLIDTSAPVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIE 626

Query: 270  ATIGFRVPENDGRRHALTLTVSDYKRRRGLL 178
            AT+G +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 627  ATVGCQVPENDGRRHALTLTVSDYKRRRGLL 657



 Score =  105 bits (262), Expect = 2e-19
 Identities = 83/208 (39%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
 Frame = -3

Query: 2163 MADLENLLLEAAGRTGS-GRKQHSRPQSKRLREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1990
            MA+LENLLLEAAGRT S G+ +HS   S+R R                     + +RKPS
Sbjct: 1    MAELENLLLEAAGRTSSSGKNRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 1989 VSQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1810
              QVPLKKR + TE                                 DLY       KL 
Sbjct: 61   GPQVPLKKRLDPTE--VDDEQGSQEEGGYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLA 118

Query: 1809 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1630
             M+EL+RE+ILSERA KK+D+ LK+K R      + K  +SRKE  P   +R RSS   +
Sbjct: 119  EMSELQRELILSERAQKKDDKSLKEKFR--PKWDKGKAPQSRKETPPLPSSRVRSSARSA 176

Query: 1629 NKP--QKDALNELRAKRKKQQDSEGLRR 1552
            ++   + DALNELRAKR KQQD E  R+
Sbjct: 177  DRAAAKDDALNELRAKRLKQQDPEAHRK 204