BLASTX nr result
ID: Cinnamomum25_contig00004653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00004653
(1181 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008807938.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 400 e-108
ref|XP_010914812.1| PREDICTED: mediator of RNA polymerase II tra... 387 e-105
ref|XP_010651384.1| PREDICTED: mediator of RNA polymerase II tra... 364 8e-98
emb|CBI16537.3| unnamed protein product [Vitis vinifera] 364 8e-98
emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera] 354 8e-95
ref|XP_010914813.1| PREDICTED: mediator of RNA polymerase II tra... 344 3e-94
ref|XP_009409662.1| PREDICTED: mediator of RNA polymerase II tra... 347 8e-93
ref|XP_010257656.1| PREDICTED: mediator of RNA polymerase II tra... 344 6e-92
ref|XP_012476941.1| PREDICTED: mediator of RNA polymerase II tra... 336 2e-89
ref|XP_012476942.1| PREDICTED: mediator of RNA polymerase II tra... 335 3e-89
ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II tra... 334 9e-89
ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citr... 334 9e-89
ref|XP_007028434.1| RNA polymerase II transcription mediators is... 333 1e-88
ref|XP_012067059.1| PREDICTED: mediator of RNA polymerase II tra... 328 6e-87
ref|XP_012067058.1| PREDICTED: mediator of RNA polymerase II tra... 328 6e-87
ref|XP_011461692.1| PREDICTED: mediator of RNA polymerase II tra... 326 2e-86
ref|XP_011461693.1| PREDICTED: mediator of RNA polymerase II tra... 324 7e-86
gb|KDP42068.1| hypothetical protein JCGZ_01856 [Jatropha curcas] 323 2e-85
ref|XP_011461690.1| PREDICTED: mediator of RNA polymerase II tra... 322 3e-85
ref|XP_011461689.1| PREDICTED: mediator of RNA polymerase II tra... 322 3e-85
>ref|XP_008807938.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 13 [Phoenix dactylifera]
Length = 1999
Score = 400 bits (1027), Expect = e-108
Identities = 218/407 (53%), Positives = 261/407 (64%), Gaps = 20/407 (4%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L S++RFGDVFTRCH F +EK FRR QP EFIF+ATEEAI+VHAIISAKHIR
Sbjct: 136 IERALRGFSYVRFGDVFTRCHPFTPNEKSFRRAQPTFEFIFSATEEAIYVHAIISAKHIR 195
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGS 819
L DD+ER+ R SS+ RE + VIV P+GMRGRLTG CPSDLVKQVY S K SNG
Sbjct: 196 GLCGDDIERISRNGSSRSTREGLPVIVGPNGMRGRLTGCCPSDLVKQVYISN-SKVSNGF 254
Query: 818 T-------AQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE----- 675
T AQS QL GQ CYVEVT+GCP +DK ++SNS + N + H+ E
Sbjct: 255 TVGVRFPVAQSSGCQLGGQSCYVEVTLGCPSTCSDKVLESNSNQSNNAIRPHTEESHFSS 314
Query: 674 -----QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWP 510
QK G P+LERT+I+PA+AV++P++ RAFARSS+KR WLQNWVGTSV E WP
Sbjct: 315 VGKGQQKQGTIYQLPILERTFIYPADAVVIPMMHRAFARSSVKRFWLQNWVGTSVLEMWP 374
Query: 509 LMNFPDSSFLMRCSRLGN---SGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXX 339
+ NF SS + C GN SG ++ L E +GM +
Sbjct: 375 IWNFLGSSRIEHCFAFGNTCCSGPLDGLGG---EFSGMRLQKQYNSSSNSITSSISSVSS 431
Query: 338 XXXXXDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAG 159
+ V GAG+LEADADS+TCR SGLS+NDQFENDGRK VSKR RTG TE+ GQAG
Sbjct: 432 TSSDSEYAVAAGAGDLEADADSLTCRHSGLSSNDQFENDGRKMVSKRARTGTTETTGQAG 491
Query: 158 SIINATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
++++AT QDAY +EY N VGS WDWDDDDRG+G
Sbjct: 492 TVVSATIQDAYNTEYSVAEANNSAAAGAANIQVGSRWDWDDDDRGVG 538
>ref|XP_010914812.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X1 [Elaeis guineensis]
Length = 2000
Score = 387 bits (994), Expect = e-105
Identities = 209/404 (51%), Positives = 252/404 (62%), Gaps = 17/404 (4%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L S++RFGDVFTRCH F + K FRR QP EFIF+ATEEAI+VHAIISAKHIR
Sbjct: 136 IERALRGFSYVRFGDVFTRCHPFTLNGKSFRRAQPTFEFIFSATEEAIYVHAIISAKHIR 195
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGS 819
L SDD+ER+ R S + RE + VIV P+GMRGRLTG CPSDLVKQVY SK K SNG
Sbjct: 196 GLCSDDIERISRNGSVRSTREGLPVIVGPNGMRGRLTGCCPSDLVKQVYISK-SKVSNGF 254
Query: 818 T-------AQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE----- 675
T A S Q GQ CYVEVT+GCP DK ++SN + N H+ E
Sbjct: 255 TVGMPFPGAPSSGCQFRGQSCYVEVTLGCPSACGDKVLESNGNQSNNAIHPHTEESHFSS 314
Query: 674 -----QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWP 510
QK G D P+LERT+I+PA+AV++P++ RAFARSS+KR WLQNWVGTS E WP
Sbjct: 315 VGKGQQKQGTIDQLPILERTFIYPADAVVIPMMHRAFARSSVKRFWLQNWVGTSAFEMWP 374
Query: 509 LMNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXX 330
L NF SS + +C GN+ + L + + + +
Sbjct: 375 LWNFLGSSRIEQCFAFGNTCSSGPLDGVGGDFSSLRLQKQYNSSSNSITSSISSVSGTSS 434
Query: 329 XXDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSII 150
+ V GAG+LEADADS+TCR SGLS+NDQFENDG K VSKR RTG TE+ GQ G+++
Sbjct: 435 DSEYAVAAGAGDLEADADSLTCRHSGLSSNDQFENDGHKMVSKRARTGTTETAGQPGTVV 494
Query: 149 NATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
+AT QDAY +EY N VGS WDWDDDDRG+G
Sbjct: 495 SATIQDAYNTEYSVAEANNSAAAGAANVQVGSRWDWDDDDRGIG 538
>ref|XP_010651384.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
[Vitis vinifera]
Length = 1987
Score = 364 bits (934), Expect = 8e-98
Identities = 208/398 (52%), Positives = 250/398 (62%), Gaps = 13/398 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L+ ++MRFGDVF++ H F+QSE+ FRR QP EFIF ATEEAIFVH IISAKH+R
Sbjct: 136 IERALIGLNYMRFGDVFSKYHPFSQSEELFRRGQPTIEFIFAATEEAIFVHVIISAKHVR 195
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNG- 822
+L S D+E V++ HSS K ES+ VIVSPHGM GR TG CPSDLVKQVYFSK K SNG
Sbjct: 196 ALASGDMEMVLK-HSSNKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFSK-FKTSNGF 253
Query: 821 -----STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE------ 675
+Q QL GQ CYVEVT+GCP G DK +QSNS RN K+H +
Sbjct: 254 IGLPYHLSQGSGCQLRGQNCYVEVTLGCPSAGTDKMLQSNSNSIRNFPKYHVADPHAMGK 313
Query: 674 -QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMNF 498
+ GL D+ V ERT+I+PAEAVLVPV+Q +F+RSSLKR WLQNW+G S+
Sbjct: 314 GAQKGLPDH--VSERTFIYPAEAVLVPVLQTSFSRSSLKRFWLQNWIGPSL--------- 362
Query: 497 PDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXDT 318
SSF +G +SL W +SNG +H D
Sbjct: 363 SGSSFFTHW-----AGKTDSLDESWIDSNGTRTQHSYNSSSNSNDSSISSITSSSSDSDV 417
Query: 317 GVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINATT 138
+TTGAG+ EADADS+TCRQSGLS+NDQ END K SKR RTGI+ESFGQ G++ NA
Sbjct: 418 KMTTGAGDPEADADSLTCRQSGLSSNDQLENDCHKLGSKRPRTGISESFGQVGTVNNAPM 477
Query: 137 QDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRG 24
QDAY+S Y ++ + SHWDWDDDDRG
Sbjct: 478 QDAYRSGYGSVEVNNSAITGVASEQI-SHWDWDDDDRG 514
>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
Length = 1812
Score = 364 bits (934), Expect = 8e-98
Identities = 208/398 (52%), Positives = 250/398 (62%), Gaps = 13/398 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L+ ++MRFGDVF++ H F+QSE+ FRR QP EFIF ATEEAIFVH IISAKH+R
Sbjct: 136 IERALIGLNYMRFGDVFSKYHPFSQSEELFRRGQPTIEFIFAATEEAIFVHVIISAKHVR 195
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNG- 822
+L S D+E V++ HSS K ES+ VIVSPHGM GR TG CPSDLVKQVYFSK K SNG
Sbjct: 196 ALASGDMEMVLK-HSSNKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFSK-FKTSNGF 253
Query: 821 -----STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE------ 675
+Q QL GQ CYVEVT+GCP G DK +QSNS RN K+H +
Sbjct: 254 IGLPYHLSQGSGCQLRGQNCYVEVTLGCPSAGTDKMLQSNSNSIRNFPKYHVADPHAMGK 313
Query: 674 -QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMNF 498
+ GL D+ V ERT+I+PAEAVLVPV+Q +F+RSSLKR WLQNW+G S+
Sbjct: 314 GAQKGLPDH--VSERTFIYPAEAVLVPVLQTSFSRSSLKRFWLQNWIGPSL--------- 362
Query: 497 PDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXDT 318
SSF +G +SL W +SNG +H D
Sbjct: 363 SGSSFFTHW-----AGKTDSLDESWIDSNGTRTQHSYNSSSNSNDSSISSITSSSSDSDV 417
Query: 317 GVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINATT 138
+TTGAG+ EADADS+TCRQSGLS+NDQ END K SKR RTGI+ESFGQ G++ NA
Sbjct: 418 KMTTGAGDPEADADSLTCRQSGLSSNDQLENDCHKLGSKRPRTGISESFGQVGTVNNAPM 477
Query: 137 QDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRG 24
QDAY+S Y ++ + SHWDWDDDDRG
Sbjct: 478 QDAYRSGYGSVEVNNSAITGVASEQI-SHWDWDDDDRG 514
>emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]
Length = 1154
Score = 354 bits (908), Expect = 8e-95
Identities = 208/419 (49%), Positives = 251/419 (59%), Gaps = 34/419 (8%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRV---------------------QPACEF 1062
IER L+ ++MRFGDVF++ H F+QSE+ FRR+ QP EF
Sbjct: 130 IERALIGLNYMRFGDVFSKYHPFSQSEELFRRINLRLEKIQRDFLWGSRAGRRGQPTIEF 189
Query: 1061 IFTATEEAIFVHAIISAKHIRSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGY 882
IF ATEEAIFVH IISAKH+R+L S D+E V++ HSS K ES+ VIVSPHGM GR TG
Sbjct: 190 IFAATEEAIFVHVIISAKHVRALASGDMEMVLK-HSSNKYSESLPVIVSPHGMLGRFTGC 248
Query: 881 CPSDLVKQVYFSKPHKASNG------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQS 720
CPSDLVKQVYFSK K SNG +Q QL GQ CYVEVT+GCP G DK +QS
Sbjct: 249 CPSDLVKQVYFSK-FKTSNGFIGLPYHLSQGSGCQLRGQNCYVEVTLGCPSAGTDKMLQS 307
Query: 719 NSTFNRNVSKHHSTEQ-------KPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLK 561
NS RN K+H + + GL D+ V ERT+I+PAEAVLVPV+Q +F+RSSLK
Sbjct: 308 NSNSIRNFPKYHVADPHAMGKGAQKGLPDH--VSERTFIYPAEAVLVPVLQTSFSRSSLK 365
Query: 560 RIWLQNWVGTSVCEAWPLMNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXX 381
R WLQNW+G S+ SSF + G +SL W +SNG +H
Sbjct: 366 RFWLQNWIGPSLS---------GSSFFTHWA-----GKTDSLDESWIDSNGTRTQHSYNS 411
Query: 380 XXXXXXXXXXXXXXXXXXXDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSK 201
D +TTGAG+ EADADS+TCRQSGLS+NDQ END K SK
Sbjct: 412 SSNSNDSSISSITSSSSDSDVKMTTGAGDPEADADSLTCRQSGLSSNDQLENDCHKLGSK 471
Query: 200 RLRTGITESFGQAGSIINATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRG 24
R RTGI+ESFGQ G++ NA QDAY+S Y ++ + SHWDWDDDDRG
Sbjct: 472 RPRTGISESFGQVGTVNNAPMQDAYRSGYGSVEVNNSAITGVASEQI-SHWDWDDDDRG 529
>ref|XP_010914813.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X2 [Elaeis guineensis]
Length = 1977
Score = 344 bits (883), Expect(2) = 3e-94
Identities = 187/359 (52%), Positives = 226/359 (62%), Gaps = 17/359 (4%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L S++RFGDVFTRCH F + K FRR QP EFIF+ATEEAI+VHAIISAKHIR
Sbjct: 136 IERALRGFSYVRFGDVFTRCHPFTLNGKSFRRAQPTFEFIFSATEEAIYVHAIISAKHIR 195
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGS 819
L SDD+ER+ R S + RE + VIV P+GMRGRLTG CPSDLVKQVY SK K SNG
Sbjct: 196 GLCSDDIERISRNGSVRSTREGLPVIVGPNGMRGRLTGCCPSDLVKQVYISK-SKVSNGF 254
Query: 818 T-------AQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE----- 675
T A S Q GQ CYVEVT+GCP DK ++SN + N H+ E
Sbjct: 255 TVGMPFPGAPSSGCQFRGQSCYVEVTLGCPSACGDKVLESNGNQSNNAIHPHTEESHFSS 314
Query: 674 -----QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWP 510
QK G D P+LERT+I+PA+AV++P++ RAFARSS+KR WLQNWVGTS E WP
Sbjct: 315 VGKGQQKQGTIDQLPILERTFIYPADAVVIPMMHRAFARSSVKRFWLQNWVGTSAFEMWP 374
Query: 509 LMNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXX 330
L NF SS + +C GN+ + L + + + +
Sbjct: 375 LWNFLGSSRIEQCFAFGNTCSSGPLDGVGGDFSSLRLQKQYNSSSNSITSSISSVSGTSS 434
Query: 329 XXDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSI 153
+ V GAG+LEADADS+TCR SGLS+NDQFENDG K VSKR RTG TE+ GQ G++
Sbjct: 435 DSEYAVAAGAGDLEADADSLTCRHSGLSSNDQFENDGHKMVSKRARTGTTETAGQPGTV 493
Score = 30.4 bits (67), Expect(2) = 3e-94
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 88 PMQEGQMIWLGLIGIGMMMIEAWARSEER 2
P+QE QM L L+GIGM EA A + +R
Sbjct: 494 PLQEQQMFRLDLVGIGMTTTEALAWTSKR 522
>ref|XP_009409662.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
[Musa acuminata subsp. malaccensis]
Length = 2110
Score = 347 bits (891), Expect = 8e-93
Identities = 198/403 (49%), Positives = 245/403 (60%), Gaps = 16/403 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
+ER L + S++RFGDVFTRCH + RR QP EF F ATEEAI+VHA++SAKHIR
Sbjct: 268 LERSLRELSYVRFGDVFTRCHPLTSN---VRRPQPTIEFTFAATEEAIYVHAVVSAKHIR 324
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNG- 822
L S D+E+++ SS +R+ I IV+P GMRGRLTG CPSDLVKQVY SK K SNG
Sbjct: 325 GLCSSDMEKLLWHCSSHSIRDGIPAIVAPTGMRGRLTGCCPSDLVKQVYSSK-LKGSNGI 383
Query: 821 ------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE----- 675
QS N QL GQ+CYVEVT C +D + SN+ N N S H+ E
Sbjct: 384 AIGMPSHMVQSSNCQLRGQRCYVEVTFDC---HSDIVMGSNNKQNTNESHVHNEEPHLIA 440
Query: 674 ----QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPL 507
QK D+ PVLERT+I+PAEAV++P++ RAFARS K +WLQNWVGTS+ E WPL
Sbjct: 441 VGKVQKKHGVDHLPVLERTFIYPAEAVVIPMMHRAFARSFNKSLWLQNWVGTSLSEMWPL 500
Query: 506 MNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXX 327
NF DSS C LG++ + E NGM +
Sbjct: 501 WNFSDSSQPELCLALGDAFISDPFNGLGVEFNGMRLQKQYNSSSNSISSSISSISRTSSE 560
Query: 326 XDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIIN 147
+ GAG+LEADADS+TCRQSGLS+NDQFENDG + VSKR RTG T++ Q G++++
Sbjct: 561 SEHATAVGAGDLEADADSLTCRQSGLSSNDQFENDGPRKVSKRPRTGATDTCVQTGTVLS 620
Query: 146 ATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
AT QDA+ S+Y N VGSHWDWD DDRG+G
Sbjct: 621 ATIQDAFMSDYSIAEVDNSGAAGAQNTQVGSHWDWDGDDRGIG 663
>ref|XP_010257656.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
[Nelumbo nucifera]
Length = 1972
Score = 344 bits (883), Expect = 6e-92
Identities = 195/395 (49%), Positives = 239/395 (60%), Gaps = 8/395 (2%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER + S++RFGDVF+RC F ++EK FRRVQP EF+F ATEEAIFVH IISAKH+R
Sbjct: 136 IERSIRGLSYVRFGDVFSRCLPFLRAEKLFRRVQPTVEFVFAATEEAIFVHVIISAKHVR 195
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGS 819
L+ DD+E V+R SS E + VI++PHGMRG+LTG CPSDLVKQVYFSK + SNG
Sbjct: 196 PLSCDDMESVLRHLSSNNTGERLPVIIAPHGMRGKLTGCCPSDLVKQVYFSKA-RTSNGF 254
Query: 818 T--------AQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTEQKPG 663
T Q+ + QL GQ C+VE+T+GC G A K G
Sbjct: 255 TVLGLPSQAVQASSCQLRGQNCHVEITLGCTGKGVALA---------------KVGLKQG 299
Query: 662 LADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMNFPDSSF 483
+ PVL+RT+I+PAEAVLVPV+ FA+SSLKRIW+QNWVGTS+ SSF
Sbjct: 300 PGHHYPVLQRTFIYPAEAVLVPVMHTVFAKSSLKRIWVQNWVGTSLF---------GSSF 350
Query: 482 LMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXDTGVTTG 303
M C LG++G +ESL +S+G+H H D TT
Sbjct: 351 FMHCLGLGSTGKMESLDGQGIDSSGIHTLHSNNSSSNSNSSSNNSISNTSSESDYRNTTR 410
Query: 302 AGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINATTQDAYK 123
+LEADADS+TCRQSGLS++DQ ENDG K SKR RT +T+SFGQ G++IN T QD YK
Sbjct: 411 GSDLEADADSLTCRQSGLSSSDQLENDGLKLASKRPRTSMTDSFGQTGTVINETMQDPYK 470
Query: 122 SEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
SEY ND VG W WDD+DR G
Sbjct: 471 SEYNSIEVNNSATAGVANDQVGPLWVWDDEDRATG 505
>ref|XP_012476941.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X1 [Gossypium raimondii]
Length = 1973
Score = 336 bits (861), Expect = 2e-89
Identities = 193/400 (48%), Positives = 243/400 (60%), Gaps = 13/400 (3%)
Frame = -1
Query: 1181 RIERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHI 1002
RIER LL S+MRFGDVF+R H Q E+ RR QP EFIF ATEE+IFVHAIIS+KHI
Sbjct: 135 RIERALLGLSYMRFGDVFSRYHP-PQIEESIRRAQPTIEFIFAATEESIFVHAIISSKHI 193
Query: 1001 RSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSK------P 840
R+L++ D+E+V+ +HSS + VI+SPHGM G+LTG CP+DLVKQVYFS P
Sbjct: 194 RTLSTGDIEKVL-EHSSNNTSYLLPVIISPHGMCGKLTGCCPNDLVKQVYFSNSGKIGLP 252
Query: 839 HKASNGSTAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE----- 675
H+ S S QL GQ CYV+V++GC + DK + N + RN+ KH STE
Sbjct: 253 HRTSQSSVC-----QLRGQNCYVKVSLGCSKSRGDKPLNPNPDYIRNLPKHQSTEAYAMG 307
Query: 674 --QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMN 501
+ G D V E+T+I+P EAVLVPV+Q +FARSSL+R WLQNW+G S+
Sbjct: 308 RVDQKGPLDLLSVHEKTFIYPPEAVLVPVLQTSFARSSLRRFWLQNWIGPSLA------- 360
Query: 500 FPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXD 321
SSF C + GN++ L W E +G+H +H
Sbjct: 361 --GSSFFRHC--FCSDGNLDILEKSWAEFSGIHTQH---CYNSSSNSNNSSISSLSSSSS 413
Query: 320 TGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINAT 141
VTTGA +LEADADS +CRQSGLS+NDQ E D K SKR R G+TES+GQAG++ NA
Sbjct: 414 DSVTTGARDLEADADS-SCRQSGLSSNDQMETDCLKLGSKRPRIGMTESYGQAGTVTNAP 472
Query: 140 TQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGM 21
T+D YKS ND +GS+WDWDDDDRG+
Sbjct: 473 TEDVYKSNIRSMEVNRAVITGVGNDQIGSNWDWDDDDRGI 512
>ref|XP_012476942.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X2 [Gossypium raimondii]
Length = 1970
Score = 335 bits (860), Expect = 3e-89
Identities = 193/400 (48%), Positives = 242/400 (60%), Gaps = 13/400 (3%)
Frame = -1
Query: 1181 RIERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHI 1002
RIER LL S+MRFGDVF+R H Q E+ RR QP EFIF ATEE+IFVHAIIS+KHI
Sbjct: 135 RIERALLGLSYMRFGDVFSRYHP-PQIEESIRRAQPTIEFIFAATEESIFVHAIISSKHI 193
Query: 1001 RSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSK------P 840
R+L++ D+E+V+ +HSS + VI+SPHGM G+LTG CP+DLVKQVYFS P
Sbjct: 194 RTLSTGDIEKVL-EHSSNNTSYLLPVIISPHGMCGKLTGCCPNDLVKQVYFSNSGKIGLP 252
Query: 839 HKASNGSTAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE----- 675
H+ S S QL GQ CYV+V++GC + DK + N + RN+ KH STE
Sbjct: 253 HRTSQSSVC-----QLRGQNCYVKVSLGCSKSRGDKPLNPNPDYIRNLPKHQSTEAYAMG 307
Query: 674 --QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMN 501
+ G D V E+T+I+P EAVLVPV+Q +FARSSL+R WLQNW+G S+
Sbjct: 308 RVDQKGPLDLLSVHEKTFIYPPEAVLVPVLQTSFARSSLRRFWLQNWIGPSLA------- 360
Query: 500 FPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXD 321
SSF C GN++ L W E +G+H +H
Sbjct: 361 --GSSFFRHC-----DGNLDILEKSWAEFSGIHTQH---CYNSSSNSNNSSISSLSSSSS 410
Query: 320 TGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINAT 141
VTTGA +LEADADS +CRQSGLS+NDQ E D K SKR R G+TES+GQAG++ NA
Sbjct: 411 DSVTTGARDLEADADS-SCRQSGLSSNDQMETDCLKLGSKRPRIGMTESYGQAGTVTNAP 469
Query: 140 TQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGM 21
T+D YKS ND +GS+WDWDDDDRG+
Sbjct: 470 TEDVYKSNIRSMEVNRAVITGVGNDQIGSNWDWDDDDRGI 509
>ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II transcription subunit
13-like [Citrus sinensis]
Length = 1966
Score = 334 bits (856), Expect = 9e-89
Identities = 193/400 (48%), Positives = 241/400 (60%), Gaps = 13/400 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L S++RFGDVF++ + +QSE+ FR+ P EFIF ATEEAIF+HA++SAKHI
Sbjct: 135 IERALNGLSYLRFGDVFSK-YQPSQSEESFRKGHPTIEFIFAATEEAIFIHALVSAKHIH 193
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNG- 822
SL+ D+E+ + SS + VIVSPHGMRGRLTGYCP+DLVKQVYF + SNG
Sbjct: 194 SLSGGDMEKGFKHSSSSSSSLRLPVIVSPHGMRGRLTGYCPTDLVKQVYF----RTSNGC 249
Query: 821 ----STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE------- 675
+Q QL+GQ CYVEVT+GCPR G+DKA NS RN+ KH+ +E
Sbjct: 250 VGLPHVSQGSGCQLNGQNCYVEVTMGCPRSGSDKASHINSNSLRNLHKHNVSESPSVGGG 309
Query: 674 QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMNFP 495
G DN E+T+I+PAEAVLVPV+Q +F+RSSL+R WLQNW+G S+
Sbjct: 310 DPKGSPDNMSAYEKTFIYPAEAVLVPVLQTSFSRSSLRRFWLQNWIGPSMA--------- 360
Query: 494 DSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXDTG 315
SSFLM C GN++SL W E+NG+H + D
Sbjct: 361 GSSFLMHC-----FGNMDSLEGSWIETNGIHAQRGYNSSSNSNNSSISSISGSSSDSDYQ 415
Query: 314 VTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINATTQ 135
+ G+LEADADS+TCRQSGLS+NDQ EN+G K SKR RTG+ ESFGQ G+ NA+T
Sbjct: 416 MNARTGDLEADADSLTCRQSGLSSNDQLENEGPKLGSKRPRTGMIESFGQMGTGTNASTD 475
Query: 134 DAYKSEYXXXXXXXXXXXXXXNDLVGSHWDW-DDDDRGMG 18
ND +G HWDW DDDDRGMG
Sbjct: 476 -------FGSVENTSAITGVANDQIGPHWDWDDDDDRGMG 508
>ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
gi|557548201|gb|ESR58830.1| hypothetical protein
CICLE_v10014014mg [Citrus clementina]
Length = 1967
Score = 334 bits (856), Expect = 9e-89
Identities = 193/400 (48%), Positives = 241/400 (60%), Gaps = 13/400 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L S++RFGDVF++ + +QSE+ FR+ P EFIF ATEEAIF+HA++SAKHI
Sbjct: 136 IERALNGLSYLRFGDVFSK-YQPSQSEESFRKGHPTIEFIFAATEEAIFIHALVSAKHIH 194
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNG- 822
SL+ D+E+ + SS + VIVSPHGMRGRLTGYCP+DLVKQVYF + SNG
Sbjct: 195 SLSGGDMEKGFKHSSSSSSSLRLPVIVSPHGMRGRLTGYCPTDLVKQVYF----RTSNGC 250
Query: 821 ----STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE------- 675
+Q QL+GQ CYVEVT+GCPR G+DKA NS RN+ KH+ +E
Sbjct: 251 VGLPHVSQGSGCQLNGQNCYVEVTMGCPRSGSDKASHINSNSLRNLHKHNVSESPSVGGG 310
Query: 674 QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMNFP 495
G DN E+T+I+PAEAVLVPV+Q +F+RSSL+R WLQNW+G S+
Sbjct: 311 DPKGSPDNMSAYEKTFIYPAEAVLVPVLQTSFSRSSLRRFWLQNWIGPSMA--------- 361
Query: 494 DSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXDTG 315
SSFLM C GN++SL W E+NG+H + D
Sbjct: 362 GSSFLMHC-----FGNMDSLEGSWIETNGIHAQRGYNSSSNSNNSSISSISGSSSDSDYQ 416
Query: 314 VTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINATTQ 135
+ G+LEADADS+TCRQSGLS+NDQ EN+G K SKR RTG+ ESFGQ G+ NA+T
Sbjct: 417 MNARTGDLEADADSLTCRQSGLSSNDQLENEGPKLGSKRPRTGMIESFGQMGTGTNASTD 476
Query: 134 DAYKSEYXXXXXXXXXXXXXXNDLVGSHWDW-DDDDRGMG 18
ND +G HWDW DDDDRGMG
Sbjct: 477 -------FGSVENTSAITGVANDQIGPHWDWDDDDDRGMG 509
>ref|XP_007028434.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
gi|508717039|gb|EOY08936.1| RNA polymerase II
transcription mediators isoform 1 [Theobroma cacao]
Length = 1985
Score = 333 bits (854), Expect = 1e-88
Identities = 197/401 (49%), Positives = 249/401 (62%), Gaps = 15/401 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IER L S+MRFGDVF++ H Q E+ FRR QP EFIF AT+E+IFVH IIS+KHIR
Sbjct: 136 IERALHGFSYMRFGDVFSKYHP-PQIEECFRRAQPTVEFIFAATQESIFVHTIISSKHIR 194
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKAS--N 825
+L++ D+E+V+ +HSSK + VI+SPHGMRGRL+G P+DLVKQVYFS K N
Sbjct: 195 ALSTSDIEKVL-EHSSKNSSYLLPVIISPHGMRGRLSGCSPNDLVKQVYFSGSGKIRTFN 253
Query: 824 G------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE---- 675
G +Q QL GQ CYV+VT+GC + G+DKA+ SN+ RN+ KHH TE
Sbjct: 254 GFIGLPYHPSQGSGCQLWGQNCYVKVTLGCSKSGSDKALNSNANI-RNLPKHHPTEASAA 312
Query: 674 ---QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLM 504
+ G D VLE+T+I+P+EAVLVPV+Q +FARSSL+R WLQNW+G S+
Sbjct: 313 GRDDQKGSLDLLSVLEKTFIYPSEAVLVPVLQTSFARSSLRRFWLQNWIGPSLAA----- 367
Query: 503 NFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXX 324
SS L C GNI+S+ W E +G+H +H
Sbjct: 368 ----SSLLRHC-----DGNIDSMERSWVEFSGIHTQH---CYNSSSNSNNSSISSISSSS 415
Query: 323 DTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINA 144
VTTGA +LEADADS +CRQSGLS+NDQ E D K SKR R GITES+GQA ++ NA
Sbjct: 416 SDSVTTGARDLEADADS-SCRQSGLSSNDQMEIDCLKMGSKRPRIGITESYGQAITVTNA 474
Query: 143 TTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGM 21
++QDAYKS ND +GS+WDWDDDDRG+
Sbjct: 475 SSQDAYKSNIGSMEVNHSAITAVGNDQIGSNWDWDDDDRGI 515
>ref|XP_012067059.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X2 [Jatropha curcas]
Length = 1963
Score = 328 bits (840), Expect = 6e-87
Identities = 187/402 (46%), Positives = 245/402 (60%), Gaps = 15/402 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IE+ L S+MR+GDVF++ H +Q+E FRR QP EF+F A EEAIFVH +ISAKHIR
Sbjct: 136 IEKALGGLSYMRYGDVFSKYHP-SQNEGLFRR-QPTVEFVFAANEEAIFVHVVISAKHIR 193
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGS 819
+L+S D+E+V++ HS+ + VIVSPHGMRG LTG CP+DL+KQVYFS K +
Sbjct: 194 ALSSGDIEKVLK-HSTNHSGYRLPVIVSPHGMRGWLTGCCPNDLIKQVYFSGSGKIRTSN 252
Query: 818 TAQSLNHQL--------HGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTEQK-- 669
L + L GQ CYVEVT+GCP +K +QS+S RN++K+H E
Sbjct: 253 RFIGLPYHLSQGPGCLLRGQNCYVEVTLGCPISDTEKGLQSSSNSIRNLTKNHVVESPVV 312
Query: 668 -----PGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLM 504
G D + E+T+I+PAEAV+VPV+Q +FARSSLKR WLQNW+G S
Sbjct: 313 GRGDHKGSPDQISIHEKTFIYPAEAVVVPVLQTSFARSSLKRFWLQNWIGPS-------- 364
Query: 503 NFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXX 324
FP SSF M C G+++S+ ESNG +H
Sbjct: 365 -FPGSSFFMHCG-----GDLDSMEGSRIESNGTRIQHGYNSSSNSNSSSIGSISSSSSDS 418
Query: 323 DTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINA 144
D +TT G+L+ADADS++CRQSGLS+NDQ E DG K SKR R+G+TE++GQ G++ N
Sbjct: 419 DQKMTTETGDLDADADSLSCRQSGLSSNDQLEIDGAKLGSKRPRSGMTEAYGQMGTMKNT 478
Query: 143 TTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
+ QDAYKS++ N+ +GSH DWDDDDRGMG
Sbjct: 479 SMQDAYKSDFGSLEVNNSTITGVANEQIGSHLDWDDDDRGMG 520
>ref|XP_012067058.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X1 [Jatropha curcas]
Length = 1977
Score = 328 bits (840), Expect = 6e-87
Identities = 187/402 (46%), Positives = 245/402 (60%), Gaps = 15/402 (3%)
Frame = -1
Query: 1178 IERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIR 999
IE+ L S+MR+GDVF++ H +Q+E FRR QP EF+F A EEAIFVH +ISAKHIR
Sbjct: 136 IEKALGGLSYMRYGDVFSKYHP-SQNEGLFRR-QPTVEFVFAANEEAIFVHVVISAKHIR 193
Query: 998 SLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGS 819
+L+S D+E+V++ HS+ + VIVSPHGMRG LTG CP+DL+KQVYFS K +
Sbjct: 194 ALSSGDIEKVLK-HSTNHSGYRLPVIVSPHGMRGWLTGCCPNDLIKQVYFSGSGKIRTSN 252
Query: 818 TAQSLNHQL--------HGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTEQK-- 669
L + L GQ CYVEVT+GCP +K +QS+S RN++K+H E
Sbjct: 253 RFIGLPYHLSQGPGCLLRGQNCYVEVTLGCPISDTEKGLQSSSNSIRNLTKNHVVESPVV 312
Query: 668 -----PGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLM 504
G D + E+T+I+PAEAV+VPV+Q +FARSSLKR WLQNW+G S
Sbjct: 313 GRGDHKGSPDQISIHEKTFIYPAEAVVVPVLQTSFARSSLKRFWLQNWIGPS-------- 364
Query: 503 NFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXX 324
FP SSF M C G+++S+ ESNG +H
Sbjct: 365 -FPGSSFFMHCG-----GDLDSMEGSRIESNGTRIQHGYNSSSNSNSSSIGSISSSSSDS 418
Query: 323 DTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINA 144
D +TT G+L+ADADS++CRQSGLS+NDQ E DG K SKR R+G+TE++GQ G++ N
Sbjct: 419 DQKMTTETGDLDADADSLSCRQSGLSSNDQLEIDGAKLGSKRPRSGMTEAYGQMGTMKNT 478
Query: 143 TTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
+ QDAYKS++ N+ +GSH DWDDDDRGMG
Sbjct: 479 SMQDAYKSDFGSLEVNNSTITGVANEQIGSHLDWDDDDRGMG 520
>ref|XP_011461692.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X4 [Fragaria vesca subsp. vesca]
Length = 1955
Score = 326 bits (836), Expect = 2e-86
Identities = 194/403 (48%), Positives = 247/403 (61%), Gaps = 15/403 (3%)
Frame = -1
Query: 1181 RIERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHI 1002
RIER L ++MRFGDVF++ H +Q+E+ R+ QP EFIF+ATEE IFVHA++SAKH+
Sbjct: 132 RIERVLSGFAYMRFGDVFSKFHP-SQNEELLRKGQPTVEFIFSATEEGIFVHALVSAKHV 190
Query: 1001 RSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKA--S 828
R+L+S D+ERV++ HSSK + VI SPHG+ GRLTG CPSDLVKQVYFS K+ S
Sbjct: 191 RALSSGDLERVLK-HSSKNSGYRLPVIASPHGICGRLTGCCPSDLVKQVYFSSSSKSKTS 249
Query: 827 NG------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTEQ-- 672
NG +Q + QL GQ CYVEVT+GCPR G+D+A+QSNS RN+ KH E
Sbjct: 250 NGLIGLPNHVSQGSDCQLRGQSCYVEVTLGCPRPGSDRALQSNSHSFRNLVKHQVAESPA 309
Query: 671 -----KPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPL 507
+ G +NS V E+T+++PAEAVLVP +Q F RSSLKR WLQNW+G S+
Sbjct: 310 LGRGDQKGSLNNSTVYEKTFVYPAEAVLVPTLQ--FVRSSLKRFWLQNWIGPSM------ 361
Query: 506 MNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXX 327
P SSF M CS S +I+ + W E+NG+ +
Sbjct: 362 ---PGSSFFMLCS----SDSIDPM-EEWNETNGIRTQRGYNSSSNSNCSSISSISSSSSE 413
Query: 326 XDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIIN 147
D + TGAGELEADADS++ RQSGLS ND+ END K SKR R G+T+SF Q G+ +
Sbjct: 414 TDYKMATGAGELEADADSLSSRQSGLSFNDRSENDSFKLGSKRPRAGMTDSFAQVGTSTS 473
Query: 146 ATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
A+ QD YKS+Y N+ GS WDWD DD G
Sbjct: 474 ASLQDTYKSDYGSVEVNNSAITGFANEQSGSLWDWDWDDSDNG 516
>ref|XP_011461693.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X5 [Fragaria vesca subsp. vesca]
Length = 1954
Score = 324 bits (831), Expect = 7e-86
Identities = 193/403 (47%), Positives = 246/403 (61%), Gaps = 15/403 (3%)
Frame = -1
Query: 1181 RIERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHI 1002
RIER L ++MRFGDVF++ H +Q+E+ R+ QP EFIF+ATEE IFVHA++SAKH+
Sbjct: 132 RIERVLSGFAYMRFGDVFSKFHP-SQNEELLRKGQPTVEFIFSATEEGIFVHALVSAKHV 190
Query: 1001 RSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKA--S 828
R+L+S D+ERV++ HSSK + VI SPHG+ GRLTG CPSDLVKQVYFS K+ S
Sbjct: 191 RALSSGDLERVLK-HSSKNSGYRLPVIASPHGICGRLTGCCPSDLVKQVYFSSSSKSKTS 249
Query: 827 NG------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTEQ-- 672
NG +Q + QL GQ CYVEVT+GCPR G+D+A+QSNS RN+ KH E
Sbjct: 250 NGLIGLPNHVSQGSDCQLRGQSCYVEVTLGCPRPGSDRALQSNSHSFRNLVKHQVAESPA 309
Query: 671 -----KPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPL 507
+ G +NS V E+T+++PAEAVLVP +Q F RSSLKR WLQNW+G S+
Sbjct: 310 LGRGDQKGSLNNSTVYEKTFVYPAEAVLVPTLQ--FVRSSLKRFWLQNWIGPSM------ 361
Query: 506 MNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXX 327
P SSF M CS +I+ + W E+NG+ +
Sbjct: 362 ---PGSSFFMLCS-----DSIDPM-EEWNETNGIRTQRGYNSSSNSNCSSISSISSSSSE 412
Query: 326 XDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIIN 147
D + TGAGELEADADS++ RQSGLS ND+ END K SKR R G+T+SF Q G+ +
Sbjct: 413 TDYKMATGAGELEADADSLSSRQSGLSFNDRSENDSFKLGSKRPRAGMTDSFAQVGTSTS 472
Query: 146 ATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
A+ QD YKS+Y N+ GS WDWD DD G
Sbjct: 473 ASLQDTYKSDYGSVEVNNSAITGFANEQSGSLWDWDWDDSDNG 515
>gb|KDP42068.1| hypothetical protein JCGZ_01856 [Jatropha curcas]
Length = 1818
Score = 323 bits (828), Expect = 2e-85
Identities = 183/392 (46%), Positives = 239/392 (60%), Gaps = 15/392 (3%)
Frame = -1
Query: 1148 MRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHIRSLTSDDVERV 969
MR+GDVF++ H +Q+E FRR QP EF+F A EEAIFVH +ISAKHIR+L+S D+E+V
Sbjct: 1 MRYGDVFSKYHP-SQNEGLFRR-QPTVEFVFAANEEAIFVHVVISAKHIRALSSGDIEKV 58
Query: 968 MRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKASNGSTAQSLNHQL- 792
++ HS+ + VIVSPHGMRG LTG CP+DL+KQVYFS K + L + L
Sbjct: 59 LK-HSTNHSGYRLPVIVSPHGMRGWLTGCCPNDLIKQVYFSGSGKIRTSNRFIGLPYHLS 117
Query: 791 -------HGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTEQK-------PGLAD 654
GQ CYVEVT+GCP +K +QS+S RN++K+H E G D
Sbjct: 118 QGPGCLLRGQNCYVEVTLGCPISDTEKGLQSSSNSIRNLTKNHVVESPVVGRGDHKGSPD 177
Query: 653 NSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLMNFPDSSFLMR 474
+ E+T+I+PAEAV+VPV+Q +FARSSLKR WLQNW+G S FP SSF M
Sbjct: 178 QISIHEKTFIYPAEAVVVPVLQTSFARSSLKRFWLQNWIGPS---------FPGSSFFMH 228
Query: 473 CSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXXDTGVTTGAGE 294
C G+++S+ ESNG +H D +TT G+
Sbjct: 229 CG-----GDLDSMEGSRIESNGTRIQHGYNSSSNSNSSSIGSISSSSSDSDQKMTTETGD 283
Query: 293 LEADADSVTCRQSGLSTNDQFENDGRKTVSKRLRTGITESFGQAGSIINATTQDAYKSEY 114
L+ADADS++CRQSGLS+NDQ E DG K SKR R+G+TE++GQ G++ N + QDAYKS++
Sbjct: 284 LDADADSLSCRQSGLSSNDQLEIDGAKLGSKRPRSGMTEAYGQMGTMKNTSMQDAYKSDF 343
Query: 113 XXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
N+ +GSH DWDDDDRGMG
Sbjct: 344 GSLEVNNSTITGVANEQIGSHLDWDDDDRGMG 375
>ref|XP_011461690.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X2 [Fragaria vesca subsp. vesca]
Length = 1955
Score = 322 bits (825), Expect = 3e-85
Identities = 194/403 (48%), Positives = 246/403 (61%), Gaps = 15/403 (3%)
Frame = -1
Query: 1181 RIERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHI 1002
RIER L ++MRFGDVF++ H +Q+E+ R+ QP EFIF+ATEE IFVHA++SAKH+
Sbjct: 132 RIERVLSGFAYMRFGDVFSKFHP-SQNEELLRKGQPTVEFIFSATEEGIFVHALVSAKHV 190
Query: 1001 RSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYF-SKPHKASN 825
R+L+S D+ERV++ HSSK + VI SPHG+ GRLTG CPSDLVKQVYF S K SN
Sbjct: 191 RALSSGDLERVLK-HSSKNSGYRLPVIASPHGICGRLTGCCPSDLVKQVYFSSSKSKTSN 249
Query: 824 G------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE---- 675
G +Q + QL GQ CYVEVT+GCPR G+D+A+QSNS RN+ KH E
Sbjct: 250 GLIGLPNHVSQGSDCQLRGQSCYVEVTLGCPRPGSDRALQSNSHSFRNLVKHQVAESPAL 309
Query: 674 ---QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPLM 504
+ G +NS V E+T+++PAEAVLVP +Q F RSSLKR WLQNW+G S+
Sbjct: 310 GRGDQKGSLNNSTVYEKTFVYPAEAVLVPTLQ--FVRSSLKRFWLQNWIGPSM------- 360
Query: 503 NFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXXX 324
P SSF M CS S +I+ + W E+NG+ +
Sbjct: 361 --PGSSFFMLCS----SDSIDP-MEEWNETNGIRTQRGYNSSSNSNCSSISSISSSSSET 413
Query: 323 DTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTV-SKRLRTGITESFGQAGSIIN 147
D + TGAGELEADADS++ RQSGLS ND+ END K SKR R G+T+SF Q G+ +
Sbjct: 414 DYKMATGAGELEADADSLSSRQSGLSFNDRSENDSFKLQGSKRPRAGMTDSFAQVGTSTS 473
Query: 146 ATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
A+ QD YKS+Y N+ GS WDWD DD G
Sbjct: 474 ASLQDTYKSDYGSVEVNNSAITGFANEQSGSLWDWDWDDSDNG 516
>ref|XP_011461689.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
isoform X1 [Fragaria vesca subsp. vesca]
Length = 1956
Score = 322 bits (825), Expect = 3e-85
Identities = 194/404 (48%), Positives = 247/404 (61%), Gaps = 16/404 (3%)
Frame = -1
Query: 1181 RIERELLKNSFMRFGDVFTRCHSFAQSEKQFRRVQPACEFIFTATEEAIFVHAIISAKHI 1002
RIER L ++MRFGDVF++ H +Q+E+ R+ QP EFIF+ATEE IFVHA++SAKH+
Sbjct: 132 RIERVLSGFAYMRFGDVFSKFHP-SQNEELLRKGQPTVEFIFSATEEGIFVHALVSAKHV 190
Query: 1001 RSLTSDDVERVMRQHSSKKLRESISVIVSPHGMRGRLTGYCPSDLVKQVYFSKPHKA--S 828
R+L+S D+ERV++ HSSK + VI SPHG+ GRLTG CPSDLVKQVYFS K+ S
Sbjct: 191 RALSSGDLERVLK-HSSKNSGYRLPVIASPHGICGRLTGCCPSDLVKQVYFSSSSKSKTS 249
Query: 827 NG------STAQSLNHQLHGQKCYVEVTIGCPRVGNDKAVQSNSTFNRNVSKHHSTE--- 675
NG +Q + QL GQ CYVEVT+GCPR G+D+A+QSNS RN+ KH E
Sbjct: 250 NGLIGLPNHVSQGSDCQLRGQSCYVEVTLGCPRPGSDRALQSNSHSFRNLVKHQVAESPA 309
Query: 674 ----QKPGLADNSPVLERTYIFPAEAVLVPVIQRAFARSSLKRIWLQNWVGTSVCEAWPL 507
+ G +NS V E+T+++PAEAVLVP +Q F RSSLKR WLQNW+G S+
Sbjct: 310 LGRGDQKGSLNNSTVYEKTFVYPAEAVLVPTLQ--FVRSSLKRFWLQNWIGPSM------ 361
Query: 506 MNFPDSSFLMRCSRLGNSGNIESLLSPWFESNGMHKRHXXXXXXXXXXXXXXXXXXXXXX 327
P SSF M CS S +I+ + W E+NG+ +
Sbjct: 362 ---PGSSFFMLCS----SDSIDP-MEEWNETNGIRTQRGYNSSSNSNCSSISSISSSSSE 413
Query: 326 XDTGVTTGAGELEADADSVTCRQSGLSTNDQFENDGRKTV-SKRLRTGITESFGQAGSII 150
D + TGAGELEADADS++ RQSGLS ND+ END K SKR R G+T+SF Q G+
Sbjct: 414 TDYKMATGAGELEADADSLSSRQSGLSFNDRSENDSFKLQGSKRPRAGMTDSFAQVGTST 473
Query: 149 NATTQDAYKSEYXXXXXXXXXXXXXXNDLVGSHWDWDDDDRGMG 18
+A+ QD YKS+Y N+ GS WDWD DD G
Sbjct: 474 SASLQDTYKSDYGSVEVNNSAITGFANEQSGSLWDWDWDDSDNG 517