BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00004427
         (1118 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   390   e-106
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra...   389   e-105
ref|XP_012468480.1| PREDICTED: mediator of RNA polymerase II tra...   367   1e-98
ref|XP_010939752.1| PREDICTED: mediator of RNA polymerase II tra...   365   4e-98
gb|KHG08969.1| Putative mediator of RNA polymerase II transcript...   364   5e-98
ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II tra...   364   7e-98
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   363   1e-97
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra...   363   1e-97
ref|XP_009789537.1| PREDICTED: mediator of RNA polymerase II tra...   363   2e-97
ref|XP_004149176.2| PREDICTED: mediator of RNA polymerase II tra...   362   3e-97
ref|XP_010098175.1| Putative mediator of RNA polymerase II trans...   362   4e-97
ref|XP_007024366.1| RNA polymerase transcriptional regulation me...   362   4e-97
ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phas...   361   5e-97
ref|XP_009591282.1| PREDICTED: mediator of RNA polymerase II tra...   360   8e-97
ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II tra...   360   1e-96
ref|XP_008447572.1| PREDICTED: mediator of RNA polymerase II tra...   360   1e-96
ref|XP_006372643.1| RNA polymerase transcriptional regulation me...   360   1e-96
gb|KHF98794.1| Putative mediator of RNA polymerase II transcript...   359   2e-96
gb|KHN05316.1| Putative mediator of RNA polymerase II transcript...   358   3e-96
ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prun...   358   4e-96

>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  390 bits (1002), Expect = e-106
 Identities = 191/250 (76%), Positives = 210/250 (84%), Gaps = 1/250 (0%)
 Frame = -2

Query: 970 PIPASGNPNFEGNP-AAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTC 794
           P PA+GNPNF+GNP AAP  PGTDMTGICF DQLWL +YPLDRNLVFDYFALSPFYDWTC
Sbjct: 4   PNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTC 63

Query: 793 NNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILD 614
           NNEQLR+RSIHPLD S LSKMTG EY+L+EVMEPHLFVIRKQKRD PEKVTPM TYYILD
Sbjct: 64  NNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILD 123

Query: 613 GSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMID 434
           GSIYQAPQLCNVF +RI RALYHISKAFTTAASKLEK G+VD+E+E+  LE K+GKE ID
Sbjct: 124 GSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETID 183

Query: 433 YKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPII 254
           +KEV RVD ILA+LQRKL               P T+E EKGPE QQ +EPQLP LDPII
Sbjct: 184 FKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPII 243

Query: 253 DQGPSKRIRY 224
           DQGPSKR+++
Sbjct: 244 DQGPSKRMKF 253


>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Vitis vinifera]
          Length = 258

 Score =  389 bits (998), Expect = e-105
 Identities = 190/250 (76%), Positives = 209/250 (83%), Gaps = 1/250 (0%)
 Frame = -2

Query: 970 PIPASGNPNFEGNP-AAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTC 794
           P PA+GNPNF+GNP A P  PGTDMTGICF DQLWL +YPLDRNLVFDYFALSPFYDWTC
Sbjct: 9   PNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTC 68

Query: 793 NNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILD 614
           NNEQLR+RSIHPLD S LSKMTG EY+L+EVMEPHLFVIRKQKRD PEKVTPM TYYILD
Sbjct: 69  NNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILD 128

Query: 613 GSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMID 434
           GSIYQAPQLCNVF +RI RALYHISKAFTTAASKLEK G+VD+E+E+  LE K+GKE ID
Sbjct: 129 GSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETID 188

Query: 433 YKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPII 254
           +KEV RVD ILA+LQRKL               P T+E EKGPE QQ +EPQLP LDPII
Sbjct: 189 FKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPII 248

Query: 253 DQGPSKRIRY 224
           DQGPSKR+++
Sbjct: 249 DQGPSKRMKF 258


>ref|XP_012468480.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X1 [Gossypium raimondii]
           gi|763749598|gb|KJB17037.1| hypothetical protein
           B456_002G261900 [Gossypium raimondii]
          Length = 252

 Score =  367 bits (941), Expect = 1e-98
 Identities = 184/248 (74%), Positives = 203/248 (81%), Gaps = 1/248 (0%)
 Frame = -2

Query: 964 PASGNPNFEGNPAAPAAP-GTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNN 788
           P +   NFE  P  P  P GTDMTGICF DQLWL TYPLDRNLVFDYFALSPFYDWTCNN
Sbjct: 5   PVAAGGNFEAPPPPPMQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNN 64

Query: 787 EQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGS 608
           EQLRMRSIHPLDLSQLSKMTG EY+LSEVMEPHLFVIRKQKRDS EKVTPM  YYILDGS
Sbjct: 65  EQLRMRSIHPLDLSQLSKMTGMEYMLSEVMEPHLFVIRKQKRDSAEKVTPMLAYYILDGS 124

Query: 607 IYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYK 428
           IYQAPQLCNVFA+R+ RALY+ISKAFTTAASKLEK G+VD+E+ES T+EPK GKE I+ K
Sbjct: 125 IYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETVEPKGGKEAINIK 184

Query: 427 EVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQ 248
           EVKRVDHILA+LQRKL               P+T+E EK PE QQ +EPQ   +DPIIDQ
Sbjct: 185 EVKRVDHILASLQRKLPPAPLPPPFPDGFVPPSTAEAEKDPENQQTAEPQPSAVDPIIDQ 244

Query: 247 GPSKRIRY 224
           GP+KR+++
Sbjct: 245 GPAKRMKF 252


>ref|XP_010939752.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Elaeis guineensis]
          Length = 260

 Score =  365 bits (936), Expect = 4e-98
 Identities = 181/256 (70%), Positives = 203/256 (79%), Gaps = 6/256 (2%)
 Frame = -2

Query: 973 TPIPASGN-----PNFEGNPAA-PAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSP 812
           TP+P +G         EGNPA  P  PGTDMTGICF DQLWL TYPLDRNLVFDYFALSP
Sbjct: 4   TPLPPAGQGAAMAAGGEGNPAGMPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 63

Query: 811 FYDWTCNNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMF 632
           FYDW+CNNEQLR RSIHPLDLS LSKMTG EY+LSEVMEPHLFVIRKQKRD PEKV+PM 
Sbjct: 64  FYDWSCNNEQLRSRSIHPLDLSHLSKMTGIEYVLSEVMEPHLFVIRKQKRDGPEKVSPML 123

Query: 631 TYYILDGSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKI 452
           TYYILDGSIYQAPQLCN+FA+R+ RALYHISKAF  AASKLEK G+ ++E+E    E K 
Sbjct: 124 TYYILDGSIYQAPQLCNIFAARMGRALYHISKAFNIAASKLEKIGYAEAENEDVNSESKA 183

Query: 451 GKEMIDYKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLP 272
            KE ID KE+KRVDHILA+LQRKL               P++SE EKGPE QQ +EPQ+P
Sbjct: 184 AKEAIDIKELKRVDHILASLQRKLPPAPAPPPFPEGYLPPSSSEAEKGPEDQQTAEPQIP 243

Query: 271 PLDPIIDQGPSKRIRY 224
           P+DPIIDQGP+KRI++
Sbjct: 244 PMDPIIDQGPAKRIKF 259


>gb|KHG08969.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Gossypium arboreum]
          Length = 252

 Score =  364 bits (935), Expect = 5e-98
 Identities = 183/248 (73%), Positives = 202/248 (81%), Gaps = 1/248 (0%)
 Frame = -2

Query: 964 PASGNPNFEGNPAAPAAP-GTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNN 788
           P +   NFE  P  P  P GTDMTGICF DQLWL TYPLDRNLVFDYFALSP YDWTCNN
Sbjct: 5   PGAAGGNFEAPPPPPMQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPLYDWTCNN 64

Query: 787 EQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGS 608
           EQLRMRSIHPLDLSQLSKMTG EY+LSEVMEPHLFVIRKQKRDS EKVTPM  YYILDGS
Sbjct: 65  EQLRMRSIHPLDLSQLSKMTGMEYMLSEVMEPHLFVIRKQKRDSAEKVTPMLAYYILDGS 124

Query: 607 IYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYK 428
           IYQAPQLCNVFA+R+ RALY+I KAFTTAASKLEK G+VD+E+ES T+EPK GKE ID+K
Sbjct: 125 IYQAPQLCNVFAARVGRALYYILKAFTTAASKLEKIGYVDTENESETVEPKGGKEAIDFK 184

Query: 427 EVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQ 248
           EVKRVDHILA+LQRKL               P+T+E EK PE QQ +EPQ   +DPIIDQ
Sbjct: 185 EVKRVDHILASLQRKLPPAPLPPPFPDGFVPPSTAEVEKDPENQQIAEPQPSAVDPIIDQ 244

Query: 247 GPSKRIRY 224
           GP+KR+++
Sbjct: 245 GPAKRMKF 252


>ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Populus euphratica] gi|743905404|ref|XP_011046103.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 6 [Populus euphratica]
          Length = 259

 Score =  364 bits (934), Expect = 7e-98
 Identities = 179/255 (70%), Positives = 201/255 (78%), Gaps = 6/255 (2%)
 Frame = -2

Query: 970 PIPASGNPNFEGNPAAPAA------PGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPF 809
           P+      NFE NP           PGTDMTGICF DQLWL TYPLDRNLVFDYFALSPF
Sbjct: 5   PVLPQPPTNFEANPPPMGPTPPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPF 64

Query: 808 YDWTCNNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFT 629
           YDWTCNNEQLR +SIHPLDLS L KMTG EY+LSEVMEPHLFV RKQKRDS EKVTPM T
Sbjct: 65  YDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLT 124

Query: 628 YYILDGSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIG 449
           YY+LDGSIYQAPQLC+VFA+R+ RALY+ISKAF TAASKLEK G+VDSE+E A  E K G
Sbjct: 125 YYVLDGSIYQAPQLCSVFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTG 184

Query: 448 KEMIDYKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPP 269
           KE+ID+KEVKR+DHILA+LQRKL                +T+E+EKGPE QQ  EPQLPP
Sbjct: 185 KEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQSTTEEEKGPETQQGGEPQLPP 244

Query: 268 LDPIIDQGPSKRIRY 224
           +DPIIDQGP+KR+++
Sbjct: 245 VDPIIDQGPAKRMKF 259


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  363 bits (932), Expect = 1e-97
 Identities = 179/244 (73%), Positives = 202/244 (82%), Gaps = 3/244 (1%)
 Frame = -2

Query: 946 NFEGNPAAPAAP---GTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNNEQLR 776
           NF+GNP APA P   GTDMTGICF DQLWL TYPLDRNL+FDYFALSPFYDWTCNNEQLR
Sbjct: 9   NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68

Query: 775 MRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGSIYQA 596
           ++SIHPLDLS LSKMTG EY+L+EV+EP+LFVIRKQKRDSPEKVTPM TYY+LDGSIYQA
Sbjct: 69  LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128

Query: 595 PQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYKEVKR 416
           PQLCNVFA+RI RALYHISKAFTTAASKLEK G+VD E E    E K+GKE+ID+KEVKR
Sbjct: 129 PQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKR 187

Query: 415 VDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQGPSK 236
           +DHILA++QRKL               PAT E EKG E +Q  E Q PP+DPIIDQGP+K
Sbjct: 188 IDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAK 247

Query: 235 RIRY 224
           R+++
Sbjct: 248 RMKF 251


>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X2 [Glycine max]
          Length = 249

 Score =  363 bits (932), Expect = 1e-97
 Identities = 178/246 (72%), Positives = 198/246 (80%)
 Frame = -2

Query: 961 ASGNPNFEGNPAAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNNEQ 782
           A GN   EG   AP  PGTDMTGICF DQLWL ++PLDRNLVFDYFALSPFYDWTCNNEQ
Sbjct: 4   APGNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQ 63

Query: 781 LRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGSIY 602
           LRMRS+HPLD+SQLSKMTG EY+LSEVMEPHLFVIRKQKRDSP+KVTPM  YY+LDGSIY
Sbjct: 64  LRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIY 123

Query: 601 QAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYKEV 422
           QAPQLCNVFA+RI RALY+I KAFTTAASKLEK G+ DSE+E+A LE K  KE ID KEV
Sbjct: 124 QAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEV 183

Query: 421 KRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQGP 242
           KRVDHILA+LQRKL               P T+E EKG E Q+ +E Q P  DPIIDQGP
Sbjct: 184 KRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGP 243

Query: 241 SKRIRY 224
           +KR+++
Sbjct: 244 AKRMKF 249


>ref|XP_009789537.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Nicotiana sylvestris]
          Length = 248

 Score =  363 bits (931), Expect = 2e-97
 Identities = 181/247 (73%), Positives = 202/247 (81%)
 Frame = -2

Query: 967 IPASGNPNFEGNPAAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNN 788
           +P  GNPNF+G   AP  PGTDMTGICF DQLWL TYPLDRNLVFDYFALSPFYDWTCNN
Sbjct: 7   MPPMGNPNFDGG--APPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNN 64

Query: 787 EQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGS 608
           EQLR R+IHPLD+S LSKMTG+EY LSEVMEPHLFVIRKQKRDSPEKVTPM TYYILDGS
Sbjct: 65  EQLRSRAIHPLDISHLSKMTGSEYTLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYILDGS 124

Query: 607 IYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYK 428
           IYQAPQLCNVFA R+ RALYHISKAF++AASKLEKTG+V +E+ES   EPK  KE ID+K
Sbjct: 125 IYQAPQLCNVFAGRLGRALYHISKAFSSAASKLEKTGYVAAENESEASEPKPAKETIDFK 184

Query: 427 EVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQ 248
           E+KRVDHILA+LQRKL               P+T+E  +     QQ+E QLPP+DPIIDQ
Sbjct: 185 ELKRVDHILASLQRKLPPVPPPPPFPEGYAPPSTAEASE----NQQAETQLPPVDPIIDQ 240

Query: 247 GPSKRIR 227
           GPSKR++
Sbjct: 241 GPSKRMK 247


>ref|XP_004149176.2| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Cucumis sativus] gi|700202880|gb|KGN58013.1|
           hypothetical protein Csa_3G434940 [Cucumis sativus]
          Length = 257

 Score =  362 bits (929), Expect = 3e-97
 Identities = 183/251 (72%), Positives = 203/251 (80%), Gaps = 2/251 (0%)
 Frame = -2

Query: 970 PIPASGNPNFEGNP--AAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWT 797
           P    G  NFEG P  AAP  PGTDMTGICF DQLWL TYPLDRNLVFDYFALSPFYDWT
Sbjct: 7   PTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWT 66

Query: 796 CNNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYIL 617
           CNNEQLRMRSIHPLDLSQLSKMTG EY+L+EVMEPHLFV RKQKRD PEKVTPM TYYIL
Sbjct: 67  CNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYIL 126

Query: 616 DGSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMI 437
           DGSIYQAPQLC+VFA+R++RALY+ISKAFTTA+SKLEK G+VDSE+ES  ++P   KE I
Sbjct: 127 DGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP--AKETI 184

Query: 436 DYKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPI 257
           ++KEVKRVDHILA+LQRKL                AT+E EKGPE  QQ E Q P  DPI
Sbjct: 185 NFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPE-NQQGESQQPSADPI 243

Query: 256 IDQGPSKRIRY 224
           IDQGP+KR+++
Sbjct: 244 IDQGPAKRMKF 254


>ref|XP_010098175.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Morus notabilis] gi|587885755|gb|EXB74612.1| Putative
           mediator of RNA polymerase II transcription subunit 6
           [Morus notabilis]
          Length = 251

 Score =  362 bits (928), Expect = 4e-97
 Identities = 176/248 (70%), Positives = 201/248 (81%), Gaps = 1/248 (0%)
 Frame = -2

Query: 964 PASGNPNFEGNPAAPAAP-GTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNN 788
           P  G P  EG P AP  P GTDMTGICF DQLWL ++PLDRNLVFDYFALSPFYDWTCNN
Sbjct: 4   PPVGAPGMEGRPPAPPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNN 63

Query: 787 EQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGS 608
           EQLRMRSIHPLDL+ LSKMTG EY+L+EV+EP+LFVIRKQKRD PEKVTPM TYY+LDGS
Sbjct: 64  EQLRMRSIHPLDLTHLSKMTGTEYMLNEVLEPNLFVIRKQKRDGPEKVTPMLTYYVLDGS 123

Query: 607 IYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYK 428
           IYQAPQLCNVFA+R  RALY++ KAFT AASKLEK G+VDSE+E+A L+ KIGKE ID+K
Sbjct: 124 IYQAPQLCNVFAARAGRALYYLQKAFTNAASKLEKIGYVDSENENAPLDSKIGKETIDFK 183

Query: 427 EVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQ 248
           E+KR+DHILA+LQRKL               P  ++ EKGPEAQQ  E Q  P+DPIIDQ
Sbjct: 184 EMKRIDHILASLQRKLPPAPPPPPFPEGYVPPQNADSEKGPEAQQAGEAQQAPVDPIIDQ 243

Query: 247 GPSKRIRY 224
           GP+KR+R+
Sbjct: 244 GPAKRMRF 251


>ref|XP_007024366.1| RNA polymerase transcriptional regulation mediator-related isoform
           1 [Theobroma cacao] gi|508779732|gb|EOY26988.1| RNA
           polymerase transcriptional regulation mediator-related
           isoform 1 [Theobroma cacao]
          Length = 257

 Score =  362 bits (928), Expect = 4e-97
 Identities = 181/250 (72%), Positives = 200/250 (80%), Gaps = 1/250 (0%)
 Frame = -2

Query: 970 PIPASGNPNFEGNPAAPAAP-GTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTC 794
           P  A+   NFE  P  P  P GTDMTGICF DQLWL TYPLDRNL+FDYFALSPFYDWTC
Sbjct: 8   PPQAAAAGNFEAPPPLPMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTC 67

Query: 793 NNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILD 614
           NNEQLRM SIHPLD+SQLSKMTG EY+LSEVMEP+LFVIRKQKRD PEKVTPM  YYILD
Sbjct: 68  NNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKRDGPEKVTPMLAYYILD 127

Query: 613 GSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMID 434
           GSIYQAPQLCNVFA+R+ RALY+ISKAFTTAASKLEK G+VD+E+ES T E K GKE ID
Sbjct: 128 GSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKETID 187

Query: 433 YKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPII 254
           +KEVKRVDHILA+LQRKL                AT+E EK PE QQ  E Q P +DPII
Sbjct: 188 FKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPII 247

Query: 253 DQGPSKRIRY 224
           DQGP+KR+++
Sbjct: 248 DQGPAKRMKF 257


>ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
           gi|561008656|gb|ESW07605.1| hypothetical protein
           PHAVU_010G143300g [Phaseolus vulgaris]
          Length = 247

 Score =  361 bits (927), Expect = 5e-97
 Identities = 179/246 (72%), Positives = 199/246 (80%)
 Frame = -2

Query: 961 ASGNPNFEGNPAAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNNEQ 782
           A GN   EG P  P  PGTDMTGICF DQLWL ++PLDRNLVFDYFALSPFYDWTCNNEQ
Sbjct: 4   APGNQMMEGGP--PPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQ 61

Query: 781 LRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGSIY 602
           LRMRS+HPLDLSQLSKMTG EY+LSEVMEPHLFVIRKQKRDSP+KVTPM  YY+LDGSIY
Sbjct: 62  LRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIY 121

Query: 601 QAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYKEV 422
           QAPQLCNVFA+RI RALY+I KAFTTAASKLEK G+VDSE+E+A +E K  KE ID KEV
Sbjct: 122 QAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEV 181

Query: 421 KRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQGP 242
           KRVDHILA+LQRKL               P T+E EKG E Q+ +E Q P  DPIIDQGP
Sbjct: 182 KRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGP 241

Query: 241 SKRIRY 224
           +KR+++
Sbjct: 242 AKRMKF 247


>ref|XP_009591282.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Nicotiana tomentosiformis]
          Length = 252

 Score =  360 bits (925), Expect = 8e-97
 Identities = 183/249 (73%), Positives = 203/249 (81%), Gaps = 2/249 (0%)
 Frame = -2

Query: 967 IPASGNPNFEGN-PAAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCN 791
           +P  GNPNF+G  P  P  PGTDMTGICF DQLWL TYPLDRNLVFDYFALSPFYDWTCN
Sbjct: 7   MPPMGNPNFDGGAPPQPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCN 66

Query: 790 NEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDG 611
           NEQLR R+IHPLD+S LSKMTG+EY LSEVMEPHLFVIRKQKRDSPEKVTPM TYYILDG
Sbjct: 67  NEQLRSRAIHPLDISHLSKMTGSEYTLSEVMEPHLFVIRKQKRDSPEKVTPMLTYYILDG 126

Query: 610 SIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEP-KIGKEMID 434
           SIYQAPQLCNVFA R+ RALYHISKAF++AASKLEKTG+V SE+ESAT EP K  KE ID
Sbjct: 127 SIYQAPQLCNVFAGRLGRALYHISKAFSSAASKLEKTGYVASENESATSEPTKPAKEPID 186

Query: 433 YKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPII 254
           +KE+KRVDHILA+LQRKL               P+T+E  +     QQ+E QLP +DPII
Sbjct: 187 FKELKRVDHILASLQRKLPPVPPPPPFPEGYAPPSTAEASE----NQQAETQLPTVDPII 242

Query: 253 DQGPSKRIR 227
           DQGPSKR++
Sbjct: 243 DQGPSKRMK 251


>ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Phoenix dactylifera]
          Length = 260

 Score =  360 bits (924), Expect = 1e-96
 Identities = 178/256 (69%), Positives = 202/256 (78%), Gaps = 6/256 (2%)
 Frame = -2

Query: 973 TPIPASGN-----PNFEGNPAA-PAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSP 812
           TP+P +G         EGNP   P  PGTDMTGICF DQLWL TYPLDR+LVFDYFALSP
Sbjct: 4   TPLPPAGQVAAMAAGGEGNPPGMPPPPGTDMTGICFRDQLWLNTYPLDRSLVFDYFALSP 63

Query: 811 FYDWTCNNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMF 632
           FYDW+CNNEQLR RSIHPLDLS LSKMTG EY+LSEVMEPHLFVIRKQKRD PEKV PM 
Sbjct: 64  FYDWSCNNEQLRSRSIHPLDLSHLSKMTGIEYVLSEVMEPHLFVIRKQKRDGPEKVNPML 123

Query: 631 TYYILDGSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKI 452
           TYYILDGSIYQAPQLCN+FA+R+ RALYHISKAF TA+SKLEK G+ ++E+E    E K 
Sbjct: 124 TYYILDGSIYQAPQLCNIFAARMGRALYHISKAFNTASSKLEKIGYAEAENEDTNSESKA 183

Query: 451 GKEMIDYKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLP 272
            KE ID KE+KRVDHILA+LQRKL               P++SE EKGPE QQ ++PQ+P
Sbjct: 184 AKEAIDIKELKRVDHILASLQRKLPPAPPPPPFPEGYAPPSSSEAEKGPEDQQTADPQVP 243

Query: 271 PLDPIIDQGPSKRIRY 224
           P+DPIIDQGP+KRI++
Sbjct: 244 PMDPIIDQGPAKRIKF 259


>ref|XP_008447572.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X1 [Cucumis melo]
          Length = 255

 Score =  360 bits (924), Expect = 1e-96
 Identities = 184/256 (71%), Positives = 205/256 (80%), Gaps = 6/256 (2%)
 Frame = -2

Query: 973 TPIPAS----GNPNFEGNP--AAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSP 812
           TP P +    G  NFEG P  AAP  PGTDMTGICF DQLWL TYPLDRNLVFDYFALSP
Sbjct: 3   TPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 62

Query: 811 FYDWTCNNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMF 632
           FYDWTCNNEQLRMRSIHPLDLSQLSKMTG EY+L+EVMEPHLFV RKQKRD PEKVTPM 
Sbjct: 63  FYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPML 122

Query: 631 TYYILDGSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKI 452
           TYYILDGSIYQAPQLCNVFA+R++RALY+ISKAFTTA+SKLEK G+VDSE+ES  ++P  
Sbjct: 123 TYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP-- 180

Query: 451 GKEMIDYKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLP 272
            KE I++KEVKRVDHILA+LQRKL                 T++ EKGPE  QQ E Q P
Sbjct: 181 AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAPTADTEKGPE-NQQGESQQP 239

Query: 271 PLDPIIDQGPSKRIRY 224
             DPIIDQGP+KR+++
Sbjct: 240 SADPIIDQGPAKRMKF 255


>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
           protein [Populus trichocarpa]
           gi|550319272|gb|ERP50440.1| RNA polymerase
           transcriptional regulation mediator-related family
           protein [Populus trichocarpa]
          Length = 259

 Score =  360 bits (923), Expect = 1e-96
 Identities = 177/247 (71%), Positives = 197/247 (79%), Gaps = 6/247 (2%)
 Frame = -2

Query: 946 NFEGNPAAPAA------PGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNNE 785
           NFE NP           PGTDMTGICF DQLWL TYPLDRNLVFDYFALSPFYDWTCNNE
Sbjct: 13  NFEANPPPMGPTPPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNE 72

Query: 784 QLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGSI 605
           QLR +SIHPLDLS L KMTG EY+LSEVMEPHLFV RKQKRDS EKVTPM TYY+LDGSI
Sbjct: 73  QLRSQSIHPLDLSHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSI 132

Query: 604 YQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYKE 425
           YQAPQLC+VFA+R+ RALY+ISKAF TAASKLEK G+VDSE+E A  E K GKE+ID+KE
Sbjct: 133 YQAPQLCSVFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKE 192

Query: 424 VKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQG 245
           VKR+DHILA+LQRKL                 T+E+EKGPE QQ  EPQLP +DPIIDQG
Sbjct: 193 VKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQG 252

Query: 244 PSKRIRY 224
           P+KR+++
Sbjct: 253 PAKRMKF 259


>gb|KHF98794.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Gossypium arboreum]
          Length = 256

 Score =  359 bits (922), Expect = 2e-96
 Identities = 181/250 (72%), Positives = 204/250 (81%), Gaps = 1/250 (0%)
 Frame = -2

Query: 970 PIPASGNPNFEGNPA-APAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTC 794
           P  A+   NFE  P  A   PGTDMTGICF DQLWL TYPLDRNL+FDYFALSPFYDWTC
Sbjct: 8   PSQAAAGGNFEAPPPPAMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTC 67

Query: 793 NNEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILD 614
           NNE+LRM+SIHPLD+SQLSKMTG EY+LSEVMEPHLF+IRKQKRDS EKVTPM  YYILD
Sbjct: 68  NNEKLRMQSIHPLDISQLSKMTGIEYMLSEVMEPHLFIIRKQKRDSAEKVTPMLAYYILD 127

Query: 613 GSIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMID 434
           GSIYQAPQLCNVFA+R+ RALY+ISKAFTTAASKLEK G+VD+E+ES T EPK GKE ID
Sbjct: 128 GSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETSEPKGGKEAID 187

Query: 433 YKEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPII 254
           +KEVKRVDHILA+LQRKL               P T+E +K PE QQ +EPQ P +DPII
Sbjct: 188 FKEVKRVDHILASLQRKL-PPAPPPPPFPDGFVPPTTEADKEPENQQTAEPQPPAVDPII 246

Query: 253 DQGPSKRIRY 224
           DQGP+KR+++
Sbjct: 247 DQGPAKRMKF 256


>gb|KHN05316.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Glycine soja]
          Length = 241

 Score =  358 bits (920), Expect = 3e-96
 Identities = 175/239 (73%), Positives = 195/239 (81%)
 Frame = -2

Query: 940 EGNPAAPAAPGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIH 761
           EG   AP  PGTDMTGICF DQLWL ++PLDRNLVFDYFALSPFYDWTCNNEQLRMRS+H
Sbjct: 3   EGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVH 62

Query: 760 PLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDGSIYQAPQLCN 581
           PLD+SQLSKMTG EY+LSEVMEPHLFVIRKQKRDSP+KVTPM  YY+LDGSIYQAPQLCN
Sbjct: 63  PLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCN 122

Query: 580 VFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDYKEVKRVDHIL 401
           VFA+RI RALY+I KAFTTAASKLEK G+ DSE+E+A LE K  KE ID KEVKRVDHIL
Sbjct: 123 VFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKRVDHIL 182

Query: 400 AALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIIDQGPSKRIRY 224
           A+LQRKL               P T+E EKG E Q+ +E Q P  DPIIDQGP+KR+++
Sbjct: 183 ASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAKRMKF 241


>ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
           gi|462413902|gb|EMJ18951.1| hypothetical protein
           PRUPE_ppa010369mg [Prunus persica]
          Length = 252

 Score =  358 bits (919), Expect = 4e-96
 Identities = 175/249 (70%), Positives = 195/249 (78%), Gaps = 2/249 (0%)
 Frame = -2

Query: 964 PASGNPNFEGNPAAPAA--PGTDMTGICFSDQLWLKTYPLDRNLVFDYFALSPFYDWTCN 791
           P    P+ EG P   A   PGTDMTGICF DQLWL +YPLDRNLVFDYFA+SPFYDWTCN
Sbjct: 4   PPMAPPSMEGTPPPMAVQPPGTDMTGICFKDQLWLNSYPLDRNLVFDYFAISPFYDWTCN 63

Query: 790 NEQLRMRSIHPLDLSQLSKMTGNEYILSEVMEPHLFVIRKQKRDSPEKVTPMFTYYILDG 611
           NEQLR RSIHPLD S LSKMTG EY L+EVMEPHLFV RKQKRD PEKVTPM TYY+LDG
Sbjct: 64  NEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDG 123

Query: 610 SIYQAPQLCNVFASRIARALYHISKAFTTAASKLEKTGFVDSESESATLEPKIGKEMIDY 431
           +IYQAPQLCNVFA+RI RALY+ISKAFTTAASKLEK G+VDSE+E+A  E K+ KE ID+
Sbjct: 124 TIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENETAAFESKVTKETIDF 183

Query: 430 KEVKRVDHILAALQRKLXXXXXXXXXXXXXXXPATSEQEKGPEAQQQSEPQLPPLDPIID 251
           KEVKRVDHIL +LQRKL                 T+E E GPE QQ  EPQ P +DPIID
Sbjct: 184 KEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAENGPETQQAGEPQQPQMDPIID 243

Query: 250 QGPSKRIRY 224
           QGP+KR+++
Sbjct: 244 QGPAKRMKF 252