BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00004109
         (1313 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, ...   548   e-153
ref|XP_006853170.1| PREDICTED: DNA-directed RNA polymerases II, ...   542   e-151
ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, ...   540   e-150
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   533   e-149
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   533   e-148
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   532   e-148
ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, ...   531   e-148
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   525   e-146
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...   525   e-146
ref|XP_011000984.1| PREDICTED: DNA-directed RNA polymerases II, ...   525   e-146
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   523   e-145
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   522   e-145
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   521   e-145
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   520   e-144
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, ...   519   e-144
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ...   519   e-144
gb|AIA09926.1| RNA polymerase II [Quercus suber]                      518   e-144
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...   518   e-144
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, ...   517   e-144
ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, ...   516   e-143

>ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Nelumbo nucifera]
          Length = 321

 Score =  548 bits (1412), Expect = e-153
 Identities = 277/323 (85%), Positives = 297/323 (91%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPKVKIREMKDDYLKF+LRETDASMANALRRVMLAEVPT+AIDLVEIEVNS+VLN
Sbjct: 4    VSYQRFPKVKIREMKDDYLKFDLRETDASMANALRRVMLAEVPTIAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTSDRAM MRFSRDCDACDGDGQCE+CSVEF L VRC SD TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEYCSVEFHLKVRCDSDQTLDVTSH 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL+SSDP++  PVDVA  A +       YD SEQRGI+IVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLKSSDPSVV-PVDVAQYAESG-----GYDASEQRGILIVKLRRGQELRLRAIARKGIGK 177

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+ HINEDLMETLTLEEKR W+ESSPT+VFDIDPNT QVVVVDP
Sbjct: 178  DHAKWSPAATVTFMYEPEFHINEDLMETLTLEEKRDWIESSPTRVFDIDPNTHQVVVVDP 237

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEVIKKAEAMGKPGLV+I AKEDSFIFTVESTG IKASQ+VINAIE+L+QKLDA
Sbjct: 238  EAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGTIKASQMVINAIEVLKQKLDA 297

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS +TEE D+QFGELGAH+RG
Sbjct: 298  VRLSEETEEADDQFGELGAHIRG 320


>ref|XP_006853170.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Amborella trichopoda] gi|548856809|gb|ERN14637.1|
            hypothetical protein AMTR_s00038p00194050 [Amborella
            trichopoda]
          Length = 324

 Score =  542 bits (1396), Expect = e-151
 Identities = 275/326 (84%), Positives = 299/326 (91%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPKVKIREMKDDYLKFELRETD SMANALRR+MLAEVPT+AIDLVEIE NS+VLN
Sbjct: 4    VSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEF+AHRLGLIPLTS++AMSMRFSRDCDACDGDGQCE+CSVEF L+V+C SD TLDVTS 
Sbjct: 64   DEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDVTSA 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSD  +  PVDVA R    +D N  +D SEQRGIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLVSSDIHVI-PVDVAGRG---MDSNG-FDASEQRGIIIVKLRRGQELRLRAIARKGIGK 178

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSP ATVTFMYEP+IHIN+DLMETL+L+EKR WVESSPT+VFDIDPNT QVVVVDP
Sbjct: 179  DHAKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVVDP 238

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEVIKKAEAMGKPGLV+I A+EDSFIFTVESTGAIKASQLVINAIE+L+QKLDA
Sbjct: 239  EAYTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLDA 298

Query: 351  VRLSLDTEECDEQFGELGAHLRGSAV 274
            VRLSLDTEE DEQFGELGAH+RG  +
Sbjct: 299  VRLSLDTEEGDEQFGELGAHMRGGGI 324


>ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Nelumbo nucifera]
          Length = 321

 Score =  540 bits (1390), Expect = e-150
 Identities = 272/323 (84%), Positives = 297/323 (91%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPKVKIREMKDDYLKFELRETDAS+ANALRRVM+AEVPT+AIDLVEIE NS+VLN
Sbjct: 4    VSYQRFPKVKIREMKDDYLKFELRETDASIANALRRVMIAEVPTIAIDLVEIEGNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAM MRFSRDCDACDGDGQCE+CSVEF L+VRC +D TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLHVRCDTDQTLDVTSY 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DLRSSDP++  PVDVA  + +     + YD SEQRGIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLRSSDPSVV-PVDVAQHSES-----TGYDASEQRGIIIVKLRRGQELRLRAIARKGIGK 177

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+IHINEDLMETLTL+EKR W+ESSPTKVF +DPNT QVVVVDP
Sbjct: 178  DHAKWSPAATVTFMYEPEIHINEDLMETLTLDEKRDWIESSPTKVFGLDPNTHQVVVVDP 237

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEVIKKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAIE+L+QKLD 
Sbjct: 238  EAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVVNAIEVLKQKLDV 297

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VR S +TEE D+QFGELGAH+RG
Sbjct: 298  VRPSEETEEADDQFGELGAHMRG 320


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  533 bits (1374), Expect = e-149
 Identities = 272/323 (84%), Positives = 294/323 (91%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPKVKIRE+KDDY KFELR+TDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 4    VSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEF L  +C +D TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTSK 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSD T+  PVD    A         YD SEQRGIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLYSSDHTVV-PVDFTDSA--------GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGK 174

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+IHINED+METLTLEEK+S+VESSPT+VFDIDPNTQQVVVVDP
Sbjct: 175  DHAKWSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDP 234

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEV+KKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAIE+L+QKLDA
Sbjct: 235  EAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDA 294

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS DT E D+QFGELGAH+RG
Sbjct: 295  VRLSEDTVEADDQFGELGAHMRG 317


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  533 bits (1372), Expect = e-148
 Identities = 270/322 (83%), Positives = 295/322 (91%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFP++KIRE+KDDY KFELR+TDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLND
Sbjct: 5    SYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQC++CSVEF L  +C +D TLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTSKD 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD +         +S YD SEQRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LYSSDHTVV-PVDFS--------DSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKD 175

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEPDIHINEDLME+L+LEEK+SWVESSPTKVFDIDPNTQQVVVVDPE
Sbjct: 176  HAKWSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPE 235

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AYTYD+EVIKKAE+MGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAIEIL+QKLDAV
Sbjct: 236  AYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAV 295

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 296  RLSEDTVEADDQFGELGAHMRG 317


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
            DNA-directed RNA polymerase II subunit RPB3-A -like
            protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
            hypothetical protein B456_008G023500 [Gossypium
            raimondii]
          Length = 318

 Score =  532 bits (1370), Expect = e-148
 Identities = 273/323 (84%), Positives = 293/323 (90%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            ISYQRFPKVKIRE+KDDY KFELR+TDASMANALRRVM++EVPT+AIDLVEIEVNS+VLN
Sbjct: 4    ISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEF L  +C SD TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTSK 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSD T+  PVD           N+ YD +E RGIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLYSSDHTVV-PVDFT--------DNAGYDSTEPRGIIIVKLRRGQELRLRAIARKGIGK 174

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+IHINEDLME+LTLEEK S+VESSPTKVFDIDPNTQQVVVVDP
Sbjct: 175  DHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDP 234

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEV+KKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAIEIL+QKLDA
Sbjct: 235  EAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDA 294

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS DT E D+QFGELGAH+RG
Sbjct: 295  VRLSEDTVEADDQFGELGAHMRG 317


>ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Elaeis guineensis]
          Length = 323

 Score =  531 bits (1369), Expect = e-148
 Identities = 269/323 (83%), Positives = 295/323 (91%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPKV+IRE+KDDY+KFELRETDAS+ANALRRVMLAEVPTLAIDLVEIEVNS+VLN
Sbjct: 5    VSYQRFPKVRIRELKDDYVKFELRETDASIANALRRVMLAEVPTLAIDLVEIEVNSSVLN 64

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTSD AM MRFSRDCD+CDGDGQC++CSVEF LNVRC SD TLDVTS 
Sbjct: 65   DEFIAHRLGLIPLTSDDAMGMRFSRDCDSCDGDGQCDYCSVEFHLNVRCDSDQTLDVTSA 124

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DLRS+ PT+C PVDVA R  A+ DPNS +D S+QRGI+IVKLRRGQELRLRAIARKGIGK
Sbjct: 125  DLRSTSPTVC-PVDVAHRVLASADPNS-FDSSDQRGILIVKLRRGQELRLRAIARKGIGK 182

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTF+YEP IHINE+LMETLTLEEKR WVESSPT+VF +DPNTQQVVVVDP
Sbjct: 183  DHAKWSPAATVTFLYEPQIHINEELMETLTLEEKRGWVESSPTRVFGMDPNTQQVVVVDP 242

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYD+EVIKKAEAMGKPGLV+I  KEDSFIFTVESTGAI+ASQLVINA+E+LRQKLDA
Sbjct: 243  EAYTYDEEVIKKAEAMGKPGLVEIYPKEDSFIFTVESTGAIRASQLVINALEVLRQKLDA 302

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRL    +E +  FGEL AHL G
Sbjct: 303  VRL----QEDESDFGELSAHLHG 321


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
            [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
            DNA-directed RNA polymerase II 36 kDa polypeptide B
            family protein [Populus trichocarpa]
          Length = 323

 Score =  525 bits (1353), Expect = e-146
 Identities = 270/327 (82%), Positives = 291/327 (88%), Gaps = 4/327 (1%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPK+KIREMKDDYLKFELRETDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 4    VSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAM MRFSRDCDACDGDGQCE+CSVEF L  +C +D TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSK 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSE----QRGIIIVKLRRGQELRLRAIARK 724
            DL SSD  +  PVD +       DP+ A DP +    QRGIIIVKLRRGQELRLRAIARK
Sbjct: 124  DLYSSDHAVI-PVDFS-------DPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARK 175

Query: 723  GIGKDHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVV 544
            GIGKDHAKWSPAATVTFMYEP+IHINEDLMETLTLEEK SW+ESSPTKVFDID  TQQVV
Sbjct: 176  GIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVV 235

Query: 543  VVDPEAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQ 364
            VVDPEAYTYDDEVIKKAEAMGK GL+DI AKEDSFIFTVESTGA+KASQLV+NAIEIL+Q
Sbjct: 236  VVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQ 295

Query: 363  KLDAVRLSLDTEECDEQFGELGAHLRG 283
            KLDAVRLS DT E D+QFGELG H+RG
Sbjct: 296  KLDAVRLSDDTVEADDQFGELGVHMRG 322


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
            [Gossypium arboreum]
          Length = 318

 Score =  525 bits (1352), Expect = e-146
 Identities = 267/322 (82%), Positives = 291/322 (90%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFP+VKIRE+KDDY KFEL +TDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLND
Sbjct: 5    SYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTS RAMSMRFSRDCDACDGDGQCEFCSVEF L  +C SD TLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTSKD 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD    A         Y+ SEQRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LYSSDHTVV-PVDFTDYA--------GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKD 175

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEP+IHINED+M+TLTLEEK+S+V+SSPT+VFDIDPNTQQVVVVDPE
Sbjct: 176  HAKWSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPE 235

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AYTYDDEV+KKAEAMGKPGLV+I AKEDSFIFT+ESTGA+KASQLV+NAIEIL+QKLDAV
Sbjct: 236  AYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQLVLNAIEILKQKLDAV 295

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 296  RLSEDTVEADDQFGELGAHMRG 317


>ref|XP_011000984.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Populus euphratica] gi|743794734|ref|XP_011000991.1|
            PREDICTED: DNA-directed RNA polymerases II, IV and V
            subunit 3-like [Populus euphratica]
          Length = 323

 Score =  525 bits (1351), Expect = e-146
 Identities = 271/327 (82%), Positives = 290/327 (88%), Gaps = 4/327 (1%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPK+KIREMKDDYLKFELRETDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 4    VSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAM MRFSRDCDACDGDGQCE+CSVEF L  +C +D TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSK 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSE----QRGIIIVKLRRGQELRLRAIARK 724
            DL SSD  +  PVD +       DP+   DP E    QRGIIIVKLRRGQELRLRAIARK
Sbjct: 124  DLYSSDHAVT-PVDFS-------DPSDDNDPFEHTETQRGIIIVKLRRGQELRLRAIARK 175

Query: 723  GIGKDHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVV 544
            GIGKDHAKWSPAATVTFMYEP+IHINEDLMETLTLEEK SW+ESSPTKVFDID  TQQVV
Sbjct: 176  GIGKDHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVV 235

Query: 543  VVDPEAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQ 364
            VVDPEAYTYDDEVIKKAEAMGK GL+DI AKEDSFIFTVESTGAIKASQLV+NAIEIL+Q
Sbjct: 236  VVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAIKASQLVLNAIEILKQ 295

Query: 363  KLDAVRLSLDTEECDEQFGELGAHLRG 283
            KLDAVRLS DT E D+QFGELG H+RG
Sbjct: 296  KLDAVRLSDDTVEADDQFGELGVHMRG 322


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
            hypothetical protein B456_012G149200 [Gossypium
            raimondii]
          Length = 318

 Score =  523 bits (1347), Expect = e-145
 Identities = 266/322 (82%), Positives = 290/322 (90%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFP+VKIRE+KDDY KFEL +TDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLND
Sbjct: 5    SYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTS RAMSMRFSRDCDACDGDGQCEFCSVEF L  +C SD TLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDVTSKD 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD    A         Y+ SEQRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LYSSDHTVV-PVDFTDSA--------GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKD 175

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEP+IHINED+M+TLTLEEK+S+V+SSPT+VFDIDPNTQQVVVVDPE
Sbjct: 176  HAKWSPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPE 235

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AYTYDDEV+KKAEAMGKPGLV+I AKEDSFIFT+ESTGA+KA QLV+NAIEIL+QKLDAV
Sbjct: 236  AYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQLVLNAIEILKQKLDAV 295

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 296  RLSEDTVEADDQFGELGAHMRG 317


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
            gi|641840877|gb|KDO59794.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
            gi|641840878|gb|KDO59795.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score =  522 bits (1345), Expect = e-145
 Identities = 268/322 (83%), Positives = 289/322 (89%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFPKVKIRE+KDDY KFELR+TDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLND
Sbjct: 5    SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEF L  +C SD TLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKD 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD ++  PVD        +DP       +QRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LYSSDHSVV-PVDF-------VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKD 176

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEP+IHINEDLME+L+LEEK+SWVESSPTKVFDIDPNT QV VVD E
Sbjct: 177  HAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAE 236

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AYTYDDEVIKKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAIE+L+QKLDAV
Sbjct: 237  AYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAV 296

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 297  RLSEDTVEADDQFGELGAHMRG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  521 bits (1341), Expect = e-145
 Identities = 264/323 (81%), Positives = 292/323 (90%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPK+KIRE+KDDY KFELRETDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 4    VSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEF L  +C +D TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTSK 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSD T+  PVD +         +S YD ++++GIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLISSDHTVV-PVDFS--------DSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGK 174

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+IHINEDLME+LTLEEK SWVESSPTKVFDID ++QQVVV D 
Sbjct: 175  DHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADA 234

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEV+KKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAI++L+QKLDA
Sbjct: 235  EAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDA 294

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS DT E D+QFGELGAH+RG
Sbjct: 295  VRLSEDTVEADDQFGELGAHMRG 317


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis
            vinifera] gi|731383801|ref|XP_010647901.1| PREDICTED:
            DNA-directed RNA polymerases II, IV and V subunit 3
            [Vitis vinifera]
          Length = 318

 Score =  520 bits (1338), Expect = e-144
 Identities = 263/323 (81%), Positives = 292/323 (90%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPK+KIRE+KDDY KFELRETDASMANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 4    VSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLN 63

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCEFCSVEF L  +C +D TLDVTS 
Sbjct: 64   DEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTSK 123

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSD T+  PVD +         +S YD ++++GIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 124  DLISSDHTVV-PVDFS--------DSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGK 174

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+IHINEDLME+LTLEEK SWVESSPTKVFDID ++QQVVV D 
Sbjct: 175  DHAKWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADA 234

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEV+KKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAI++L+QKLDA
Sbjct: 235  EAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDA 294

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS DT E D+QFGELGAH+RG
Sbjct: 295  VRLSEDTVEADDQFGELGAHMRG 317


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  519 bits (1337), Expect = e-144
 Identities = 264/322 (81%), Positives = 291/322 (90%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFP+VKIREM+ DYLKFELR+TDAS+ANALRRVM+AEVPT+AIDLVEIE+NS+VLND
Sbjct: 5    SYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCE+CSVEF L  RC SD TLDVTS +
Sbjct: 65   EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDVTSKE 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD +          S Y+ SEQRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LLSSDHTVV-PVDFSDA--------SGYEASEQRGIIIVKLRRGQELRLRAIARKGIGKD 175

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEPDI INE++M+TL+LE+K +WV+SSPTKVF+IDPNT +VVVVDPE
Sbjct: 176  HAKWSPAATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPE 235

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AYTYDDEVIKKAEAMGKPGLVDI AKEDSFIFTVESTGAIKASQL++NAIEIL+QKLDAV
Sbjct: 236  AYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAV 295

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 296  RLSEDTVEADDQFGELGAHMRG 317


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Glycine max] gi|734335936|gb|KHN08054.1| DNA-directed
            RNA polymerase II subunit RPB3-A [Glycine soja]
          Length = 320

 Score =  519 bits (1336), Expect = e-144
 Identities = 261/323 (80%), Positives = 291/323 (90%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SY R P+VKIRE+KDDY KFELR+TDAS+ANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 5    VSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVLN 64

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEF L V+C +D TLDVTS 
Sbjct: 65   DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTSK 124

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSDPT+  PVD +       DP++   P   RGIIIVKLRRGQEL+LRAIARKGIGK
Sbjct: 125  DLYSSDPTVS-PVDFS-------DPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGK 176

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP+IHINEDLMETLTLEEKR WV+SSPT+VF+IDP TQQV+VVD 
Sbjct: 177  DHAKWSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDA 236

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            EAYTYDDEV+KKAEAMGKPGLV+I A++DSFIFTVESTGA+KASQLV+NAIEIL+QKLDA
Sbjct: 237  EAYTYDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDA 296

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS DT E D+QFGELGAH+RG
Sbjct: 297  VRLSEDTVEADDQFGELGAHMRG 319


>gb|AIA09926.1| RNA polymerase II [Quercus suber]
          Length = 317

 Score =  518 bits (1335), Expect = e-144
 Identities = 269/323 (83%), Positives = 290/323 (89%)
 Frame = -3

Query: 1251 ISYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLN 1072
            +SYQRFPKVKIREMKDD +KFELRETDAS+ANALRRVM+AEVPT+AIDLVEIEVNS+VLN
Sbjct: 5    MSYQRFPKVKIREMKDDMVKFELRETDASVANALRRVMIAEVPTVAIDLVEIEVNSSVLN 64

Query: 1071 DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTST 892
            DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEF L  +C +D TLDVTS 
Sbjct: 65   DEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCLTDQTLDVTSK 124

Query: 891  DLRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGK 712
            DL SSD T+  PV+ +       DPN   D  EQRGIIIVKLRRGQELRLRAIARKGIGK
Sbjct: 125  DLYSSDHTVV-PVEFS-------DPN---DAGEQRGIIIVKLRRGQELRLRAIARKGIGK 173

Query: 711  DHAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDP 532
            DHAKWSPAATVTFMYEP I INEDLMET++LEEKR+W+ESSPTKVFDIDP TQQVVVV+P
Sbjct: 174  DHAKWSPAATVTFMYEPMIRINEDLMETMSLEEKRTWIESSPTKVFDIDPVTQQVVVVEP 233

Query: 531  EAYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDA 352
            E YTYDDEVIKKA+AMGK GLV+I AKEDSFIFTVESTGAIKASQLV+NAIEIL+QKLDA
Sbjct: 234  ELYTYDDEVIKKADAMGKSGLVEIEAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDA 293

Query: 351  VRLSLDTEECDEQFGELGAHLRG 283
            VRLS DT E D+QFGELGAHLRG
Sbjct: 294  VRLSDDTVEADDQFGELGAHLRG 316


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Eucalyptus grandis] gi|629097957|gb|KCW63722.1|
            hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score =  518 bits (1334), Expect = e-144
 Identities = 264/322 (81%), Positives = 290/322 (90%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFP VK+RE KDDYLKFELR TDAS+ANALRRVM+AEVPT+AIDLVEIEVNS+VLND
Sbjct: 8    SYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEVNSSVLND 67

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGL+PLTSDRAMSMRFSRDCDACDGDGQCEFCSVEF L  +C +D TLDVTS D
Sbjct: 68   EFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTSKD 127

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD +           A D +EQ+GI IVKLRRGQELRLRAIARKGIGKD
Sbjct: 128  LISSDHTVV-PVDFSDAL--------ADDSAEQKGITIVKLRRGQELRLRAIARKGIGKD 178

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEP+IHINEDL+ETL+LEEK+SWVESSPTKVFDIDPNT+QV+VVDPE
Sbjct: 179  HAKWSPAATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVVDPE 238

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AYTYD+EVIKKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQLV+NAI++L+QKLDAV
Sbjct: 239  AYTYDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAV 298

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 299  RLSEDTVEADDQFGELGAHMRG 320


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Cicer arietinum]
          Length = 319

 Score =  517 bits (1331), Expect = e-144
 Identities = 262/322 (81%), Positives = 294/322 (91%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SY R P+VKIRE+KDDY+KFELR+TDAS+ANALRRVM++EVPT+AIDLVEIEVNS+VLND
Sbjct: 5    SYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEF L V+C +D TLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVTSKD 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD +A      DP+S  + S+ RGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LYSSDHTVV-PVDFSA------DPSSL-ESSDGRGIIIVKLRRGQELRLRAIARKGIGKD 176

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEPDIHINEDLME+LTLEEKR WV+SSPT+VFDIDP TQQV+VVDPE
Sbjct: 177  HAKWSPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPE 236

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
            AY+YDDEVIKKAEAMGKPGLV+I AK+DSFIFTVESTGA+KASQL++NAIEIL+QKLDAV
Sbjct: 237  AYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAV 296

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 297  RLSEDTVEADDQFGELGAHMRG 318


>ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            isoform X1 [Jatropha curcas] gi|643741758|gb|KDP47129.1|
            hypothetical protein JCGZ_22125 [Jatropha curcas]
          Length = 317

 Score =  516 bits (1330), Expect = e-143
 Identities = 265/322 (82%), Positives = 287/322 (89%)
 Frame = -3

Query: 1248 SYQRFPKVKIREMKDDYLKFELRETDASMANALRRVMLAEVPTLAIDLVEIEVNSTVLND 1069
            SYQRFPKVKIRE+KDDY KF L +TD+SMANALRRVM+AEVPT+AIDLVEIEVNS+VLND
Sbjct: 5    SYQRFPKVKIRELKDDYCKFVLYDTDSSMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64

Query: 1068 EFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFTLNVRCTSDHTLDVTSTD 889
            EFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEF L  +C +D TLDVTS D
Sbjct: 65   EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSKD 124

Query: 888  LRSSDPTICCPVDVAARATAALDPNSAYDPSEQRGIIIVKLRRGQELRLRAIARKGIGKD 709
            L SSD T+  PVD +         +S Y+ +EQRGIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 125  LYSSDHTVI-PVDFS---------DSGYESNEQRGIIIVKLRRGQELRLRAIARKGIGKD 174

Query: 708  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKRSWVESSPTKVFDIDPNTQQVVVVDPE 529
            HAKWSPAATVTFMYEPDIHINEDLMETLTLEEK+SWVESSPTKVF IDP TQQV V D E
Sbjct: 175  HAKWSPAATVTFMYEPDIHINEDLMETLTLEEKQSWVESSPTKVFTIDPVTQQVKVEDHE 234

Query: 528  AYTYDDEVIKKAEAMGKPGLVDINAKEDSFIFTVESTGAIKASQLVINAIEILRQKLDAV 349
             YTYDDEVIKKAEAMGKPGLVDI AKED+FIFTVESTGAIKASQLV+NAIE+L+QKLDAV
Sbjct: 235  LYTYDDEVIKKAEAMGKPGLVDIRAKEDTFIFTVESTGAIKASQLVLNAIEVLKQKLDAV 294

Query: 348  RLSLDTEECDEQFGELGAHLRG 283
            RLS DT E D+QFGELGAH+RG
Sbjct: 295  RLSEDTVEADDQFGELGAHMRG 316