BLASTX nr result

ID: Cinnamomum25_contig00004102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00004102
         (401 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009604309.1| PREDICTED: nucleolin-like isoform X2 [Nicoti...    57   4e-06
ref|XP_009604237.1| PREDICTED: nucleolin-like isoform X1 [Nicoti...    57   4e-06
ref|XP_010274514.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   5e-06
ref|XP_009783096.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   6e-06
ref|XP_009783095.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   6e-06

>ref|XP_009604309.1| PREDICTED: nucleolin-like isoform X2 [Nicotiana tomentosiformis]
          Length = 787

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
 Frame = -1

Query: 353 MPPR-VKKTPARA------------TKPSRKKQIPPEEKINEAPXXXXXXXXXXXXXXXX 213
           MPP+ V+KTP  +            TK   K ++  EE + E P                
Sbjct: 1   MPPKAVRKTPIGSGSKRGGRTARGTTKSQAKTELKTEEVVEEKPELKTVEPEPKEKTV-- 58

Query: 212 XXXXXXXXXXXXKPSKPQAESPSKPQVEPKSEPNGSLPAKEEEGVNDAFDDDGKGERLEL 33
                          +P AE  ++ ++E KS  NG++  K+E+ V ++ D   KGERL+L
Sbjct: 59  ---------------EPVAEDRAETEMEAKSVENGAVSEKKEDDVKESVDQYEKGERLDL 103

Query: 32  DDNDVEYEPE 3
           +DND EYEPE
Sbjct: 104 EDNDPEYEPE 113


>ref|XP_009604237.1| PREDICTED: nucleolin-like isoform X1 [Nicotiana tomentosiformis]
          Length = 788

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
 Frame = -1

Query: 353 MPPR-VKKTPARA------------TKPSRKKQIPPEEKINEAPXXXXXXXXXXXXXXXX 213
           MPP+ V+KTP  +            TK   K ++  EE + E P                
Sbjct: 1   MPPKAVRKTPIGSGSKRGGRTARGTTKSQAKTELKTEEVVEEKPELKTVEPEPKEKTV-- 58

Query: 212 XXXXXXXXXXXXKPSKPQAESPSKPQVEPKSEPNGSLPAKEEEGVNDAFDDDGKGERLEL 33
                          +P AE  ++ ++E KS  NG++  K+E+ V ++ D   KGERL+L
Sbjct: 59  ---------------EPVAEDRAETEMEAKSVENGAVSEKKEDDVKESVDQYEKGERLDL 103

Query: 32  DDNDVEYEPE 3
           +DND EYEPE
Sbjct: 104 EDNDPEYEPE 113


>ref|XP_010274514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
           X1 [Nelumbo nucifera] gi|720059245|ref|XP_010274515.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           R-like isoform X1 [Nelumbo nucifera]
           gi|720059248|ref|XP_010274516.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein R-like isoform
           X1 [Nelumbo nucifera] gi|720059252|ref|XP_010274517.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           R-like isoform X1 [Nelumbo nucifera]
           gi|720059255|ref|XP_010274518.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein R-like isoform
           X1 [Nelumbo nucifera] gi|720059258|ref|XP_010274519.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           R-like isoform X1 [Nelumbo nucifera]
          Length = 785

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -1

Query: 167 KPQAESPSKPQVEPKSEPNGSLPAKEEEGVNDAFDDDGKGERLELDDNDVEYEPE 3
           KP+ E    P+ E K E NG + AKEE  V + FD+D K ERLEL+DN+ EYE E
Sbjct: 64  KPE-ERTVDPEPEVKPETNGPVSAKEEHDVKELFDEDDKAERLELEDNEPEYEAE 117


>ref|XP_009783096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
           X2 [Nicotiana sylvestris]
          Length = 787

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/55 (45%), Positives = 39/55 (70%)
 Frame = -1

Query: 167 KPQAESPSKPQVEPKSEPNGSLPAKEEEGVNDAFDDDGKGERLELDDNDVEYEPE 3
           +P+ E  ++ ++E KS  NG++  K+E+ V ++ D   KGERL+L+DND EYEPE
Sbjct: 59  EPEPEDRAETEMEAKSVENGAVSEKKEDDVKESVDQYEKGERLDLEDNDPEYEPE 113


>ref|XP_009783095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
           X1 [Nicotiana sylvestris]
          Length = 788

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/55 (45%), Positives = 39/55 (70%)
 Frame = -1

Query: 167 KPQAESPSKPQVEPKSEPNGSLPAKEEEGVNDAFDDDGKGERLELDDNDVEYEPE 3
           +P+ E  ++ ++E KS  NG++  K+E+ V ++ D   KGERL+L+DND EYEPE
Sbjct: 59  EPEPEDRAETEMEAKSVENGAVSEKKEDDVKESVDQYEKGERLDLEDNDPEYEPE 113


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