BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00003994
         (4399 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV a...  1786   0.0  
ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV a...  1782   0.0  
ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a...  1773   0.0  
ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV a...  1734   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...  1726   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1703   0.0  
ref|XP_012703111.1| PREDICTED: DNA-directed RNA polymerases IV a...  1700   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...  1699   0.0  
ref|XP_010667540.1| PREDICTED: DNA-directed RNA polymerases IV a...  1696   0.0  
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...  1694   0.0  
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...  1694   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1687   0.0  
ref|XP_010046894.1| PREDICTED: DNA-directed RNA polymerases IV a...  1684   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...  1682   0.0  
ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [S...  1673   0.0  
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ...  1663   0.0  
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a...  1662   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1662   0.0  
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...  1660   0.0  
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S...  1659   0.0  

>ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Phoenix dactylifera]
          Length = 1189

 Score = 1786 bits (4626), Expect = 0.0
 Identities = 859/1171 (73%), Positives = 1011/1171 (86%), Gaps = 11/1171 (0%)
 Frame = -2

Query: 4026 VEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGE 3847
            V +L +FC++AARSFF E GLISHQI+SYN+FI +GIQ +FDS+GE+ VEPGYDPSKK  
Sbjct: 29   VGSLEKFCKEAARSFFAEWGLISHQINSYNEFIGHGIQDLFDSLGEVNVEPGYDPSKKRG 88

Query: 3846 GGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQ 3667
              WR+A+V FGK+++EKP FW+G   +DDL +E L L PRHARLQNMTYS+++KVE+ +Q
Sbjct: 89   AEWRHATVSFGKVRLEKPSFWSG---RDDLPEENLKLLPRHARLQNMTYSSQLKVEVRVQ 145

Query: 3666 VYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDI 3487
            VYTQE  KSDK KTGK+ Y++K V+S++K+++ IGRIPVM++S LCWL   +K DCL+D 
Sbjct: 146  VYTQE--KSDKAKTGKDAYIHKNVVSDKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDS 203

Query: 3486 GGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCG 3307
            GGYFLIKGMEK FIAQE+R L R+W+++KPSW V Y S  KRKR+Y+KL E PKA+G  G
Sbjct: 204  GGYFLIKGMEKTFIAQEQRHLARVWVTDKPSWTVSYLSEMKRKRIYIKLVEAPKAEGFSG 263

Query: 3306 VKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATIS------- 3148
             K++N  FLY+ +IP+WIMFFALGASSDKEV +MI L    + L+NI+LAT+        
Sbjct: 264  GKVVNFFFLYA-TIPVWIMFFALGASSDKEVFEMIDLGESSADLINIILATVKNADEHYK 322

Query: 3147 ----DADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFL 2980
                DADEH ++FR+  K+ ++++ Q+K +KFPP ES +E +DK+LFPN++ H++KALFL
Sbjct: 323  KFREDADEHDKNFRRVDKAQDYVNSQVKVSKFPPSESFDEYVDKFLFPNISGHRQKALFL 382

Query: 2979 GYMVKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYG 2800
            GYMVKCLLL+  G+RKCDN+DDFRNKRL+LAGELL+REL  H++HAERRM+KAMQRDLYG
Sbjct: 383  GYMVKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYG 442

Query: 2799 DKSLQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRK 2620
            D+ LQ IERYLDASIITNGL+RAFSTG+W HP+KR ERCSGIVATLRRTNPLQMM+DLRK
Sbjct: 443  DRDLQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRK 502

Query: 2619 TRQRVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKL 2440
            TRQ+V Y GK GDAR+PNPSYWGK+CFLSTPDGENCGLVKN+AVT LVS+ +TEP +DKL
Sbjct: 503  TRQQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTALVSLKVTEPILDKL 562

Query: 2439 TFCGMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRD 2260
              CGME LD++S SS+   DKVF+NG WVG+C +S +FV KLR MRR + IHPQVEIKRD
Sbjct: 563  ISCGMEKLDEISLSSISNMDKVFMNGDWVGVCADSTSFVAKLRCMRRARLIHPQVEIKRD 622

Query: 2259 QHQGEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCIT 2080
            +HQ EVRIFSDAGRI+RPLLIVENLKK  ++KGG  S + L  E IIELIGVEEEEDC T
Sbjct: 623  KHQREVRIFSDAGRILRPLLIVENLKKTSKLKGGVCSFQYLMDEGIIELIGVEEEEDCHT 682

Query: 2079 AWGIENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQ 1900
            AWGI +LF  D+  G P+ KY+HCELD+SFLLGLSCGIIPFANHNFARRVLYQ+EKHSQQ
Sbjct: 683  AWGIRHLFMGDE--GGPAPKYSHCELDVSFLLGLSCGIIPFANHNFARRVLYQAEKHSQQ 740

Query: 1899 AIGFSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNA 1720
            AIGFSTTNPNIRVDTL+HQLYYPQ+PLFRT+ +DCLGR DY+L  K++ PRPEYFNGQNA
Sbjct: 741  AIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRADYSLRRKDSMPRPEYFNGQNA 800

Query: 1719 IVAVNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFA 1540
            IVAVNVHQGYNQEDSLVMN+ASLERGMFRTEH RSYKAEV+NKE+  TKR K +DK+DF 
Sbjct: 801  IVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKEL--TKRFKLRDKVDFG 858

Query: 1539 KTESKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSA 1360
            K +SK GRVDSLDDDG PYIGA+LQSGDIVIGK AESG DH IKLKHTE+G VQKVVLSA
Sbjct: 859  KMQSKKGRVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSA 918

Query: 1359 NDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHA 1180
            ND+GKNFAVV+LRQVRSPCLGDKFSSMHGQKGVVGFLESQEN PFT QGIVPD+VINPHA
Sbjct: 919  NDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHA 978

Query: 1179 FPTRQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQ 1000
            FPTRQTPGQLLEAALGKGIACGGS+++ATPF TAS+D+I +QLHRAG+SRWG E+V NG+
Sbjct: 979  FPTRQTPGQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGR 1038

Query: 999  TGEKIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERD 820
            TGE + ++IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERD
Sbjct: 1039 TGEVMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERD 1098

Query: 819  CLLAHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADS 640
            CLLAHGAA+NLHERLF LSD+SQM +CQ C R ANVI R V GG KIRGPYC +C+S+++
Sbjct: 1099 CLLAHGAASNLHERLFTLSDFSQMHICQTCKRAANVILRPVVGGNKIRGPYCNYCQSSEN 1158

Query: 639  VVKVNVPYGAKLLYQELFSVGICLKFETEVC 547
            +VK+NVPYGAKLLYQELFS+GICLKF+TEVC
Sbjct: 1159 IVKINVPYGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Elaeis guineensis]
          Length = 1189

 Score = 1782 bits (4615), Expect = 0.0
 Identities = 859/1171 (73%), Positives = 1010/1171 (86%), Gaps = 11/1171 (0%)
 Frame = -2

Query: 4026 VEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGE 3847
            V +L +FC++AARSFF E GLISHQI+SYN+FIE+GIQ +FDS+GE+ VEPGYDPSKK  
Sbjct: 29   VGSLEKFCKEAARSFFAEWGLISHQINSYNEFIEHGIQDLFDSLGEVNVEPGYDPSKKRG 88

Query: 3846 GGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQ 3667
              WR+A+V FGK+++EKP FW+G   +DDL +E L L PRHARLQNMTYS++MKVE+ + 
Sbjct: 89   AEWRHATVSFGKVRLEKPSFWSG---RDDLPEENLKLLPRHARLQNMTYSSQMKVEVRVL 145

Query: 3666 VYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDI 3487
            VYTQE  KSDK KTGK+ Y+ K V+S++K+++ IGRIPVM++S LCWL   +K DCL+D 
Sbjct: 146  VYTQE--KSDKAKTGKDAYIVKNVVSDKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDS 203

Query: 3486 GGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCG 3307
            GGYFLIKGMEK FIAQE+R L R+W+++KPSW V Y S  KRKR+Y+KL E PKA+G  G
Sbjct: 204  GGYFLIKGMEKTFIAQEQRHLARVWVTDKPSWAVSYLSEIKRKRIYIKLVEAPKAEGFSG 263

Query: 3306 VKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATIS------- 3148
             K++N  FLY+ +IP+WIMFFALGASSDKEV +MI L    + L+NI+LAT+        
Sbjct: 264  GKVVNFFFLYA-TIPVWIMFFALGASSDKEVFEMIDLGESSADLINIILATVKNADEHYK 322

Query: 3147 ----DADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFL 2980
                DADEH ++FR+  K+ ++++ Q+K +KFPP ES +E +DK+LFPN+  H++KALFL
Sbjct: 323  KFREDADEHDKNFRRIDKAQDYVNGQVKVSKFPPSESFDEYVDKFLFPNIYGHRQKALFL 382

Query: 2979 GYMVKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYG 2800
            GYMVKCLLL+  G+RKCDN+DDFRNKRL+LAGELL+REL  H++HAERRM+KAMQRDLYG
Sbjct: 383  GYMVKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYG 442

Query: 2799 DKSLQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRK 2620
            D+ LQ IERYLDASIITNGL+RAFSTG+W HP+KR ERCSGIVATLRRTNPLQMM+DLRK
Sbjct: 443  DRDLQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRK 502

Query: 2619 TRQRVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKL 2440
            TRQ+V Y GK GDAR+PNPSYWGK+CFLSTPDGENCGLVKN+AVT LVS+ +TEP +DKL
Sbjct: 503  TRQQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTALVSLKVTEPILDKL 562

Query: 2439 TFCGMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRD 2260
              CGME LD++S +S+   DKVFLNG WVG+C +S +FV +LR MRR   IH QVEIKRD
Sbjct: 563  ISCGMEKLDEISLTSVSSMDKVFLNGDWVGVCADSSSFVARLRCMRRATLIHSQVEIKRD 622

Query: 2259 QHQGEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCIT 2080
            +HQ EVRIFSDAGRI+RPLLIVENL+KI ++KGG  S + L  + IIELIGVEEEEDC T
Sbjct: 623  KHQREVRIFSDAGRILRPLLIVENLEKISKLKGGVCSFQHLMDQGIIELIGVEEEEDCPT 682

Query: 2079 AWGIENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQ 1900
            AWGI +LF  D+  GQP+ KYTHCELD+SFLLGLSCGIIPFANHNFARRVLYQ+EKHSQQ
Sbjct: 683  AWGIRHLFMGDE--GQPAPKYTHCELDVSFLLGLSCGIIPFANHNFARRVLYQAEKHSQQ 740

Query: 1899 AIGFSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNA 1720
            AIGFSTTNPNIRVDTL+HQLYYPQ+PLFRT+ +DCLGR  ++LG K++ PRPEYFNGQNA
Sbjct: 741  AIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRAVHSLGRKDSMPRPEYFNGQNA 800

Query: 1719 IVAVNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFA 1540
            IVAVNVHQGYNQEDSLVMN+ASLERGMFRTEH RSYKAEV+NKE+  TKR K +DK+DF 
Sbjct: 801  IVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKEL--TKRFKLRDKVDFG 858

Query: 1539 KTESKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSA 1360
            K +SK G+VDSLDDDG PYIGA+LQSGDIVIGK AESG DH IKLKHTE+G VQKVVLSA
Sbjct: 859  KMQSKKGKVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSA 918

Query: 1359 NDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHA 1180
            ND+GKNFAVV+LRQVRSPCLGDKFSSMHGQKGVVGFLESQEN PFT QGIVPD+VINPHA
Sbjct: 919  NDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHA 978

Query: 1179 FPTRQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQ 1000
            FPTRQTPGQLLEAALGKGIACGGS+++ATPF TAS+D+I +QLHRAG+SRWG E+V NG+
Sbjct: 979  FPTRQTPGQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGR 1038

Query: 999  TGEKIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERD 820
            TGE + ++IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERD
Sbjct: 1039 TGEVMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERD 1098

Query: 819  CLLAHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADS 640
            CLLAHGAA+NLHERLFMLSD+SQM +CQ C R ANVI R V GG KIRGPYC FC+S+++
Sbjct: 1099 CLLAHGAASNLHERLFMLSDFSQMHICQTCRRAANVILRPVVGGNKIRGPYCNFCQSSEN 1158

Query: 639  VVKVNVPYGAKLLYQELFSVGICLKFETEVC 547
            +VK+NVPYGAKLLYQELFS+GICLKF+TEVC
Sbjct: 1159 IVKINVPYGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nelumbo nucifera]
          Length = 1201

 Score = 1773 bits (4591), Expect = 0.0
 Identities = 859/1160 (74%), Positives = 1001/1160 (86%), Gaps = 3/1160 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            LS+FCR+A+ +FF E GLISHQI+SYNDFIENG+Q +FDS+GEI V PGYDPSKKG GGW
Sbjct: 46   LSKFCREASMAFFKEFGLISHQINSYNDFIENGLQTLFDSLGEIKVGPGYDPSKKGGGGW 105

Query: 3837 RYASVKFGKIKIEKPQFWTGEK-PQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVY 3661
            R+AS+KFGK+ +++P FWTGEK   +   KEYL L PRHARLQNMTYSAR+K E+ +QVY
Sbjct: 106  RHASIKFGKVTVDRPNFWTGEKFSSEKSDKEYLKLLPRHARLQNMTYSARLKAEVRVQVY 165

Query: 3660 TQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGG 3481
            T  LI SDKFK+G+++ +   V S++   VV+GRIPVMV+S+LCW+    K DC +D GG
Sbjct: 166  TVNLINSDKFKSGQDKIIQNDVKSDDNYVVVLGRIPVMVRSSLCWMNELGKSDCDFDHGG 225

Query: 3480 YFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCGVK 3301
            YFLIKG EK FIAQE+ CL RLW+S+KPSW+V Y S+ K++RVY+KL E PK +   G  
Sbjct: 226  YFLIKGTEKTFIAQEQICLKRLWVSSKPSWMVSYRSNLKKRRVYIKLIETPKPEYLQGGN 285

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
            ++N++FL S +IP+WI+FFALGASSDKE+ +MI LD  +++ VNI+L+TI DADE CE F
Sbjct: 286  VLNVYFL-SSTIPLWILFFALGASSDKEIVEMIDLDISDATFVNILLSTICDADEKCEGF 344

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK+GK+L+ I E IK  KFPP +SIE+ ++  LFP L+S++EKALFLGYMVKCLLLSYTG
Sbjct: 345  RKEGKALKHIDELIKNTKFPPTDSIEDILNNSLFPALSSYREKALFLGYMVKCLLLSYTG 404

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRKC+NRDDFRNKRLELAG+LL REL VH++HA+RRM KAMQ+DLYGD++L  IE YLDA
Sbjct: 405  RRKCENRDDFRNKRLELAGDLLERELRVHIRHAQRRMTKAMQKDLYGDRALHPIEHYLDA 464

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGL+RAFSTG+WSHPF   ER SG+VATLRRTNPLQM AD+RKTRQ+V Y GK GD
Sbjct: 465  SIITNGLTRAFSTGAWSHPFNTGERLSGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGD 524

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENL-DKVS 2404
            ARFPNPS+WGK+CFLSTPDGENCGLVKN+A+TGLVS N  EP +D L  CGME L D  S
Sbjct: 525  ARFPNPSHWGKLCFLSTPDGENCGLVKNLAITGLVSTNSVEPLLDILLNCGMEKLVDCNS 584

Query: 2403 PSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDA 2224
            P+S+ GKDKVFLNG+W+G+C +S  FV+ LRN RR + I  QVEIKRDQ QGEVRIFSDA
Sbjct: 585  PASVSGKDKVFLNGEWIGVCIDSAKFVRDLRNKRRSKEIPHQVEIKRDQQQGEVRIFSDA 644

Query: 2223 GRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDK 2044
            GRI+RPLL+VENL+KIK  KGG  S +SL  + ++EL+GVEEEEDC TAWG++ L    K
Sbjct: 645  GRILRPLLVVENLRKIKEFKGG-YSFQSLLDKGVLELVGVEEEEDCQTAWGVKYLLMRGK 703

Query: 2043 DKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIR 1864
            D  +P + YTHCELDLS+L+GLSC +IPFANH+ ARRVLYQSEKHSQQAIGFSTTNPNIR
Sbjct: 704  D--EPPVNYTHCELDLSYLMGLSCSLIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIR 761

Query: 1863 VDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQ 1684
            VDTL+HQLYYPQRPLFRTM SDCLGR +Y  G+    PRPEYFNGQNAIVAVNVH GYNQ
Sbjct: 762  VDTLSHQLYYPQRPLFRTMVSDCLGRPEYPQGHNGVLPRPEYFNGQNAIVAVNVHLGYNQ 821

Query: 1683 EDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFET-KRLKPKDKIDFAKTESKIGRVDS 1507
            EDSLVMN+ASLERGMFRTEHIRSYKA+VDN E+F+  KR +PKD++DF K +SK GRVDS
Sbjct: 822  EDSLVMNRASLERGMFRTEHIRSYKADVDNSELFDNNKRQRPKDRVDFGKIQSKFGRVDS 881

Query: 1506 LDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVS 1327
            LDDDG P+IGANLQ+GDIVIG++AESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVS
Sbjct: 882  LDDDGFPFIGANLQAGDIVIGRSAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVS 941

Query: 1326 LRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLL 1147
            LRQVRSP LGDKFSSMHGQKGV+GFLESQEN PFTLQGIVPD+VINPHAFPTRQTPGQLL
Sbjct: 942  LRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTLQGIVPDIVINPHAFPTRQTPGQLL 1001

Query: 1146 EAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFM 967
            EAALGKGIACGGS+++ATP+  ASID+I DQLHRAGYSRWG ER+YNG+TGE + +LIFM
Sbjct: 1002 EAALGKGIACGGSMRYATPYTAASIDVITDQLHRAGYSRWGSERIYNGRTGEMMRSLIFM 1061

Query: 966  GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANL 787
            GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGVKFGEMERDCLLAHGAAANL
Sbjct: 1062 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGVKFGEMERDCLLAHGAAANL 1121

Query: 786  HERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAK 607
            HERLFMLSD+SQM +C+KCT +ANVIQR V GGKKIRGPYCRFCESA+++V+VNVPYGAK
Sbjct: 1122 HERLFMLSDFSQMHICRKCTNLANVIQRPVPGGKKIRGPYCRFCESAENIVRVNVPYGAK 1181

Query: 606  LLYQELFSVGICLKFETEVC 547
            LL QELFS+GI +KFETEVC
Sbjct: 1182 LLCQELFSMGISVKFETEVC 1201


>ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
            acuminata subsp. malaccensis]
            gi|695051016|ref|XP_009413519.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Musa acuminata
            subsp. malaccensis]
          Length = 1198

 Score = 1734 bits (4491), Expect = 0.0
 Identities = 843/1168 (72%), Positives = 990/1168 (84%)
 Frame = -2

Query: 4050 GEGSSGPTVEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPG 3871
            G   S   +  L +FC++AAR+FF E GLI+HQISSYNDF+E+GIQ +FD++G++VVEPG
Sbjct: 41   GSLDSDLNIGNLEKFCKEAARAFFKEWGLINHQISSYNDFVEHGIQDLFDTLGDVVVEPG 100

Query: 3870 YDPSKKGEGGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSAR 3691
            YDPSKKG+G WR+AS+ FGK+++EKP+FW     ++D+ +  L L PRHARLQNMTYS++
Sbjct: 101  YDPSKKGDGAWRHASITFGKVRLEKPEFWP---EKNDIEEGSLKLLPRHARLQNMTYSSQ 157

Query: 3690 MKVEINLQVYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNE 3511
            MKV++ +QVY QE  KSDK K G   Y+ K+V ++++ ++ IGR+PVMV+SNLCWL+   
Sbjct: 158  MKVKVRVQVYVQE--KSDKAKIGNSSYIQKRVQNDDEGEITIGRLPVMVQSNLCWLSALG 215

Query: 3510 KGDCLYDIGGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEP 3331
            K DCL+D GGYFLIKGMEK FI QE+RCLTRLW+ +KP   V Y S  KRKR+YVKL E 
Sbjct: 216  KSDCLFDSGGYFLIKGMEKTFIGQEQRCLTRLWVIDKPVATVSYLSEIKRKRIYVKLVEA 275

Query: 3330 PKADGPCGVKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATI 3151
            PKA+G  G K+I+++FLY+ ++PIWIMFFALGASSDKEV +MI L   ++ ++NI+LATI
Sbjct: 276  PKAEGFHGGKVISVYFLYA-TMPIWIMFFALGASSDKEVLEMIDLKDCDAGMINIILATI 334

Query: 3150 SDADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYM 2971
             DADE  E FR   K+ E ++  IK AKFPP ES +E + KYLFPN+  H+ KA FLGYM
Sbjct: 335  KDADEQFEGFRSLDKAREHVNALIKNAKFPPSESFDEYVAKYLFPNIIGHRTKAHFLGYM 394

Query: 2970 VKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKS 2791
            VKCLLLS  G+RKCDN+DDFRNKRL+LAGELL+REL  H++HAE+RM++AMQRDL GD+ 
Sbjct: 395  VKCLLLSSFGKRKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVRAMQRDLSGDRD 454

Query: 2790 LQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQ 2611
            LQ IERYLDASIITNGL+RAFSTG+W+HP+K+ ER SGIVATLRRTNPLQMM+D+RKTRQ
Sbjct: 455  LQPIERYLDASIITNGLNRAFSTGAWTHPYKKTERLSGIVATLRRTNPLQMMSDMRKTRQ 514

Query: 2610 RVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFC 2431
            +V Y GK GDAR+PNPSYWGK+CFLSTPDGENCGLVKN+AVT +VS  I EP +DKL  C
Sbjct: 515  QVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKIMEPILDKLIAC 574

Query: 2430 GMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQ 2251
            GME LD++S SSL    KVFLNG WVG+C +  +F  +LR+MRR + IHPQVEIKRD+HQ
Sbjct: 575  GMEKLDEISLSSLSQMHKVFLNGDWVGVCPDMSSFADRLRSMRRAKLIHPQVEIKRDKHQ 634

Query: 2250 GEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWG 2071
             EVRIF+DAGRI+RPLLIVENLKKI+ +KGG  S +SL  ++IIELIGVEEEEDC TAWG
Sbjct: 635  KEVRIFTDAGRILRPLLIVENLKKIRNLKGGVCSFQSLMDQEIIELIGVEEEEDCQTAWG 694

Query: 2070 IENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIG 1891
            I+ L   ++    P+  Y+HCELD SFLLGLSCGIIPFA+HNFARRVLYQSEKHSQQAIG
Sbjct: 695  IKYLLAVNEGISAPN--YSHCELDPSFLLGLSCGIIPFASHNFARRVLYQSEKHSQQAIG 752

Query: 1890 FSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVA 1711
            FSTTNP+IRVDTL+H LYYPQ PLFRT+ +DCL R DY+LG K++  RPEYFNGQNAIVA
Sbjct: 753  FSTTNPSIRVDTLSHHLYYPQTPLFRTVIADCLVRADYSLGRKDSMTRPEYFNGQNAIVA 812

Query: 1710 VNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTE 1531
            VNVHQGYNQEDSLVMN+ SLERGMFRTEH RSYKA+VDNKE+  TKR+K KDK+ F K E
Sbjct: 813  VNVHQGYNQEDSLVMNRTSLERGMFRTEHFRSYKADVDNKEL--TKRIKLKDKVAFGKIE 870

Query: 1530 SKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDD 1351
            SK GRVDSLDDDG PYIGA+LQSGDIVIGK AESG DHSIKLKHTE+G VQKVVLSAND+
Sbjct: 871  SKKGRVDSLDDDGFPYIGASLQSGDIVIGKVAESGDDHSIKLKHTEKGMVQKVVLSANDE 930

Query: 1350 GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPT 1171
            GKNFAVV+LRQVRSPCLGDKFSSMHGQKGV+GFLE+QEN PFT QGIVPD+VINPHAFPT
Sbjct: 931  GKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLETQENFPFTHQGIVPDIVINPHAFPT 990

Query: 1170 RQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGE 991
            RQTPGQLLEAALGKGIAC GS ++ATPF+TAS+D I  QLHRAGYSRWG ERV NG+TGE
Sbjct: 991  RQTPGQLLEAALGKGIACEGSKRYATPFSTASVDDITAQLHRAGYSRWGSERVLNGRTGE 1050

Query: 990  KIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL 811
             + ++IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL
Sbjct: 1051 MMHSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL 1110

Query: 810  AHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVK 631
            AHGAAANLHERLFMLSD+ QM +CQKC R  NVI R V GGKKIRGPYC FC+S +++V+
Sbjct: 1111 AHGAAANLHERLFMLSDFFQMHICQKCQRAVNVILRPVPGGKKIRGPYCGFCQSGENIVR 1170

Query: 630  VNVPYGAKLLYQELFSVGICLKFETEVC 547
            +NVPYGAKLLYQELFS+GICLKFETEVC
Sbjct: 1171 INVPYGAKLLYQELFSMGICLKFETEVC 1198


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score = 1726 bits (4471), Expect = 0.0
 Identities = 832/1164 (71%), Positives = 979/1164 (84%), Gaps = 5/1164 (0%)
 Frame = -2

Query: 4023 EALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEG 3844
            E L  FC+  A SFFNE+GLI HQI+S+NDFI+NGIQR+FDS GEI VEPGYDPSK+GEG
Sbjct: 44   EYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEG 103

Query: 3843 GWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQV 3664
             WRYASV+FGK+ +E+P+ W GE       KE L+  PRHARLQNMTYS+RMK +++ QV
Sbjct: 104  DWRYASVRFGKVTLERPRVWAGESDG----KESLNFLPRHARLQNMTYSSRMKAQVHFQV 159

Query: 3663 YTQELIKSDKFKTGKE-QYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDI 3487
            YTQ+L++SDK+KTGK+ +YV KKV+ E+ RD++IGRIPVMVKS LCW+ G E+GDC YD 
Sbjct: 160  YTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDH 219

Query: 3486 GGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCG 3307
            GGYFLIKG EK FIAQE+ CL RLW+S+ P+W+V Y   +KRKRVYVKL  P   +   G
Sbjct: 220  GGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGG 279

Query: 3306 VKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCE 3127
             K++ ++F  S  IPIWI+FFALGASSDKEV  +I  +  ++ + NI++A+I +AD   E
Sbjct: 280  EKVLTVYFS-STEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAE 338

Query: 3126 D----FRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCL 2959
                 FR+QG ++ F+ + +K  KFPP ESI+ECI KYLFPN +  K+KA FLGYMVKCL
Sbjct: 339  KKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCL 398

Query: 2958 LLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFI 2779
            L +YTGRRKCDNRDDFRNKRLELAGELL REL VH++HAERRM+KAMQR+LYGD+ L+ I
Sbjct: 399  LQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPI 458

Query: 2778 ERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLY 2599
            E YLDASIITNGLSRAFSTG WSHPFKRMER SG+VATLRRTNPLQM AD+RKTRQ+V Y
Sbjct: 459  ENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQY 518

Query: 2598 IGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMEN 2419
             GK GDAR+P+PS+WGKVCFLSTPDGENCGLVKN+A+TGLVS  + +P +DKL  CGME 
Sbjct: 519  TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEK 578

Query: 2418 LDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVR 2239
            L   + + L GK+KVFL+G WVG+C +  +FV +LR  RR + +  QVEIKRD+ QGEVR
Sbjct: 579  LVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVR 638

Query: 2238 IFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENL 2059
            IFSDAGRI+RPLL+VENLKK+K  KG D + +SL  + I+ELIG EEEEDC TAWGI+ L
Sbjct: 639  IFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL 698

Query: 2058 FNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTT 1879
                 D   P +KYTHCELD+SFLLGLSCGIIP+ANH+ ARRVLYQSEKHSQQAIGFSTT
Sbjct: 699  LKGHDD---PPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTT 755

Query: 1878 NPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVH 1699
            NPNIRVDTL+HQLYYPQRPLFRTM SDCLG+  Y+ G+K   PRPEYFNGQ AIVAVNVH
Sbjct: 756  NPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVH 815

Query: 1698 QGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIG 1519
             GYNQEDSLVMN+ASLERGMFR+EHIRSYK+EVDN E  + KR K +D + F K +SKIG
Sbjct: 816  LGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKR-KSEDSVHFGKMQSKIG 874

Query: 1518 RVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNF 1339
            RVDSLDDDG P+IGANLQ+GDIVIG+ AESG DHSIKLKHTERG VQKVV+SANDDGKNF
Sbjct: 875  RVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNF 934

Query: 1338 AVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTP 1159
            AVVSLRQVR+PCLGDKFSSMHGQKGV+GFLESQEN PFT+QGIVPD+VINPHAFP+RQTP
Sbjct: 935  AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 994

Query: 1158 GQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEA 979
            GQLLEAALGKGIACGG ++HATPF+T S+D I DQLHRAG+SRWG ERVYNG+TGE + +
Sbjct: 995  GQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRS 1054

Query: 978  LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 799
            LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCL+AHGA
Sbjct: 1055 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGA 1114

Query: 798  AANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVP 619
            AANLHERLF LSD + M +C++C  ++NVIQR V+GG+K+RGPYCR+CES++ +VKVNVP
Sbjct: 1115 AANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVP 1174

Query: 618  YGAKLLYQELFSVGICLKFETEVC 547
            YGAKLL QELFS+GI LKFET++C
Sbjct: 1175 YGAKLLCQELFSMGISLKFETQLC 1198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1703 bits (4411), Expect = 0.0
 Identities = 826/1164 (70%), Positives = 970/1164 (83%), Gaps = 5/1164 (0%)
 Frame = -2

Query: 4023 EALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEG 3844
            E L  FC+  A SFFNE+GLI HQI+S+NDFI+NGIQR+FDS GEI VEPGYDPSK+GEG
Sbjct: 80   EYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEG 139

Query: 3843 GWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQV 3664
             WRYASV+FGK+ +E+P+ W GE       KE L+  PRHARLQNMTYS+RMK +++ QV
Sbjct: 140  DWRYASVRFGKVTLERPRVWAGESDG----KESLNFLPRHARLQNMTYSSRMKAQVHFQV 195

Query: 3663 YTQELIKSDKFKTGKE-QYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDI 3487
            YTQ+L++SDK+KTGK+ +YV KKV+ E+ RD++IGRIPVMVKS LCW+ G E+GDC YD 
Sbjct: 196  YTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDH 255

Query: 3486 GGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCG 3307
            GGYFLIKG EK FIAQE+ CL RLW+S+ P+W+V Y   +KRKRVYVKL  P   +   G
Sbjct: 256  GGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGG 315

Query: 3306 VKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCE 3127
             K++ ++F  S  IPIWI+FFALGASSDKEV  +I  +  ++ + NI++A+I +AD   E
Sbjct: 316  EKVLTVYFS-STEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAE 374

Query: 3126 D----FRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCL 2959
                 FR+QG ++ F+ + +K  KFPP ESI+ECI KYLFPN +  K+KA FLGYMVKCL
Sbjct: 375  KKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCL 434

Query: 2958 LLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFI 2779
            L +YTGRRKCDNRDDFRNKRLELAGELL REL VH++HAERRM+KAMQR+LYGD+ L+ I
Sbjct: 435  LQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPI 494

Query: 2778 ERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLY 2599
            E YLDASIITNGLSRAFSTG WSHPFKRMER SG+VATLRRTNPLQM AD+RKTRQ+V Y
Sbjct: 495  ENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQY 554

Query: 2598 IGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMEN 2419
             GK GDAR+P+PS+WGKVCFLSTPDGENCGLVKN+A+TGLVS  + +P +DKL  CGME 
Sbjct: 555  TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEK 614

Query: 2418 LDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVR 2239
            L   + + L GK+KVFL+G WVG+C +  +FV +LR  RR + +  QVEIKRD+ QGEVR
Sbjct: 615  LVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVR 674

Query: 2238 IFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENL 2059
            IFSDAGRI+RPLL+VENLKK+K  KG D + +SL  + I+ELIG EEEEDC TAWGI+ L
Sbjct: 675  IFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL 734

Query: 2058 FNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTT 1879
                 D   P +KYTHCELD+SFLLGLSCGIIP+ANH+ ARRVLYQSEKHSQQAIGFSTT
Sbjct: 735  LKGHDD---PPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTT 791

Query: 1878 NPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVH 1699
            NPNIRVDTL+HQLYYPQRPLFRTM SD               PRPEYFNGQ AIVAVNVH
Sbjct: 792  NPNIRVDTLSHQLYYPQRPLFRTMISDL--------------PRPEYFNGQIAIVAVNVH 837

Query: 1698 QGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIG 1519
             GYNQEDSLVMN+ASLERGMFR+EHIRSYK+EVDN E  + KR K +D + F K +SKIG
Sbjct: 838  LGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKR-KSEDSVHFGKMQSKIG 896

Query: 1518 RVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNF 1339
            RVDSLDDDG P+IGANLQ+GDIVIG+ AESG DHSIKLKHTERG VQKVV+SANDDGKNF
Sbjct: 897  RVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNF 956

Query: 1338 AVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTP 1159
            AVVSLRQVR+PCLGDKFSSMHGQKGV+GFLESQEN PFT+QGIVPD+VINPHAFP+RQTP
Sbjct: 957  AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 1016

Query: 1158 GQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEA 979
            GQLLEAALGKGIACGG ++HATPF+T S+D I DQLHRAG+SRWG ERVYNG+TGE + +
Sbjct: 1017 GQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRS 1076

Query: 978  LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA 799
            LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCL+AHGA
Sbjct: 1077 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGA 1136

Query: 798  AANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVP 619
            AANLHERLF LSD + M +C++C  ++NVIQR V+GG+K+RGPYCR+CES++ +VKVNVP
Sbjct: 1137 AANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVP 1196

Query: 618  YGAKLLYQELFSVGICLKFETEVC 547
            YGAKLL QELFS+GI LKFET++C
Sbjct: 1197 YGAKLLCQELFSMGISLKFETQLC 1220


>ref|XP_012703111.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Setaria italica]
          Length = 1234

 Score = 1700 bits (4403), Expect = 0.0
 Identities = 807/1176 (68%), Positives = 996/1176 (84%), Gaps = 8/1176 (0%)
 Frame = -2

Query: 4050 GEGSSGP--------TVEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSI 3895
            G+ SS P        +VE+L +FC++A+RSFF+E GLISHQI+SYN+F+ +G+Q++FDS+
Sbjct: 74   GKSSSEPYSNVPIDMSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQKLFDSL 133

Query: 3894 GEIVVEPGYDPSKKGEGGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARL 3715
            G+++VEPGYDPSKKG GGW++A +KFG++K+EKP FW+G+   D      +D  PRHARL
Sbjct: 134  GDVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWSGKDEVD------IDFKPRHARL 187

Query: 3714 QNMTYSARMKVEINLQVYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSN 3535
            QNMTY++R+KVE+ ++VY+ E  KSDK KTG + +V K+    E   + IGR+PVMVKSN
Sbjct: 188  QNMTYASRIKVEVTIKVYSLE--KSDKSKTGNDDFVQKRDFMNETHWIYIGRLPVMVKSN 245

Query: 3534 LCWLAGNEKGDCLYDIGGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKR 3355
            LC L   ++ DCL+D GGYFL+KGMEK FIAQE+RCL+RLWIS++P W V + S  KR+R
Sbjct: 246  LCLLHNLKESDCLFDAGGYFLVKGMEKVFIAQEQRCLSRLWISDRPCWTVSFMSEIKRRR 305

Query: 3354 VYVKLAEPPKADGPCGVKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSL 3175
            +Y+KL E  K+D   G KII+I FLY+ ++PIW+MFFALG SSDKEV  +I +   ++S+
Sbjct: 306  IYIKLVESTKSDDFSGSKIISISFLYA-TMPIWLMFFALGISSDKEVFDVIDMQDGDASV 364

Query: 3174 VNIVLATISDADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKE 2995
            +N + ATI ++DE CE FRK  K+ +++ E +K ++FPP ES ++ +D++LFP+++ H+ 
Sbjct: 365  INTISATIKESDELCEGFRKSDKARQYVDELVKNSRFPPAESFDDYVDRFLFPDISGHRN 424

Query: 2994 KALFLGYMVKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQ 2815
            KALFLGYMVKCLL+++TG+RKCDN+DDFRNKRL+LAGELL+REL  H++ AERRM+KA+Q
Sbjct: 425  KALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLARELRAHIRLAERRMVKAIQ 484

Query: 2814 RDLYGDKSLQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMM 2635
            RDL  D+ LQ +ERYLDASI+TNGL+RAFSTGSW HP+K+ ERCSGIVATLRRTNPLQM+
Sbjct: 485  RDLNSDRELQDLERYLDASIVTNGLNRAFSTGSWCHPYKKTERCSGIVATLRRTNPLQMI 544

Query: 2634 ADLRKTRQRVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEP 2455
            +DLRKTRQRV Y GK GDAR+PNPSYWGK+CF+STPDGENCGLVKN+AVT +VS  + +P
Sbjct: 545  SDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVEQP 604

Query: 2454 TMDKLTFCGMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQV 2275
             ++    CGM  L+++   ++   DK+FLNG WVG C +S +FV +LR MRR   IHPQV
Sbjct: 605  LIESFISCGMSKLNEIPTENIQRMDKIFLNGNWVGCCTDSASFVLRLRCMRRSSLIHPQV 664

Query: 2274 EIKRDQHQGEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEE 2095
            EIKRD+HQ EVR+FS+AGRI+RPLL+VENL KI++ KG   S + L +++IIE IGVEEE
Sbjct: 665  EIKRDKHQKEVRVFSEAGRILRPLLVVENLNKIRKPKGRSYSFQELIQQEIIEFIGVEEE 724

Query: 2094 EDCITAWGIENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 1915
            ED   AWGI +LF  +   G+ S  YTHCELD SFLLGLSCGIIPFANHNFARRVLYQSE
Sbjct: 725  EDIQCAWGIRHLFGSE---GEIS-SYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSE 780

Query: 1914 KHSQQAIGFSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYF 1735
            KHSQQAIG+STTNP+IRVDTL+HQLYYPQRPLF+T+ +DCLGR DYT+G ++   RPEYF
Sbjct: 781  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTIGRRDDFARPEYF 840

Query: 1734 NGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKD 1555
            NGQNAIVAVNVHQG+NQEDSLVMN+ASLERGMFRTEH+RSYKA+V+NK++  TKRLK K+
Sbjct: 841  NGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKDV--TKRLKMKE 898

Query: 1554 KIDFAKTESKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQK 1375
            KIDF K ESK GRVD+LDDDGLPYIGA+LQ+ DIVIGK +ESG DHSIKLKHTE+G VQK
Sbjct: 899  KIDFGKMESKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQK 958

Query: 1374 VVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVV 1195
            V+LSAND+GKNFAVV+LRQVR+PCLGDKFSSMHGQKGVVGFLESQEN PFT  GIVPD+V
Sbjct: 959  VLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTRDGIVPDIV 1018

Query: 1194 INPHAFPTRQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRER 1015
            INPHAFPTRQTPGQLLEAALGKGIA GG++++ATPF TAS+D+I +QLH+AG+S+WG E 
Sbjct: 1019 INPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASVDVIAEQLHKAGFSKWGAES 1078

Query: 1014 VYNGQTGEKIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 835
            V NG+TGE++++++FMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG
Sbjct: 1079 VINGRTGERMQSMVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFG 1138

Query: 834  EMERDCLLAHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFC 655
            EMERDCLLAHGAAANLHERLFMLSD+SQM +CQKC RVANVI R V GGKKIRGPYC FC
Sbjct: 1139 EMERDCLLAHGAAANLHERLFMLSDFSQMHICQKCERVANVIMRCVPGGKKIRGPYCGFC 1198

Query: 654  ESADSVVKVNVPYGAKLLYQELFSVGICLKFETEVC 547
            +S++++V++NVPYGAKLLYQELFS+GICLKFETEVC
Sbjct: 1199 KSSENIVRINVPYGAKLLYQELFSMGICLKFETEVC 1234


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score = 1699 bits (4400), Expect = 0.0
 Identities = 831/1158 (71%), Positives = 965/1158 (83%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L  FC+ A+  FF ++GLISHQI+SYNDFI  GIQR+FDS+GEI VEPGYDPSK+G+G W
Sbjct: 68   LKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDW 127

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            ++ASVKFGK+ +E+P+FW GEK   D  KEYLDL PRHARLQNMTYSAR+ VE ++QVYT
Sbjct: 128  KHASVKFGKVSLERPRFWAGEKFSVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 187

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            ++L++SDKFKTG +Q+V+K+   E+KRDV+IGRIPVMV S LCW+ G +K DC +D GGY
Sbjct: 188  KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGY 247

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCGV-K 3301
            F++KG EK FIAQE+ CL RLW+SN P+W V Y    KR RVY+KLAE  K +   GV K
Sbjct: 248  FIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEK 307

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             + ++F  ++ +PIWI+FFALG SSD+EV  +I +D +++++VNI++A+I DAD+ CEDF
Sbjct: 308  ALTVYFSVAE-MPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDADKKCEDF 366

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK  K+L ++   IK  +FPP+ES+EECI +YLFPNL+  K+KA FLGYMVK LL ++ G
Sbjct: 367  RKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHAFIG 426

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRK DNRDDFRNKRLELAGELL REL  H+KHAERRM+KAMQRDLYGD+ +Q IE YLDA
Sbjct: 427  RRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDA 486

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG W HP+KRMER SG+VAT+RRTNPLQM AD+RKTRQ+V Y GK GD
Sbjct: 487  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGD 546

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGKVCFLSTPDGENCGLVKN+A  GLVS  I +P ++ L  CGM+ L   S 
Sbjct: 547  ARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQKLVDDSA 606

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
             SL GK KV LNG WVG+C +S  FV KLR  RRR  +  QVE+KRD+ QGEVRIFSDAG
Sbjct: 607  ISLHGKQKVLLNGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRIFSDAG 666

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+V NLKKIK +KGGD   +SL    IIELIG EEEEDC TAWG+E L   DK+
Sbjct: 667  RILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLKADKE 726

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
               P  KYTHCELD+SFLLGLSCGIIPFANH+ ARRVLYQSEKHSQQAIGFST NPNIRV
Sbjct: 727  --NPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRV 784

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DT THQLYYPQRPLFRTM SD LG+  Y    K   PRPEY+NGQ AIVAVNVH GYNQE
Sbjct: 785  DTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQKGMLPRPEYYNGQCAIVAVNVHLGYNQE 844

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN+ASLERGMFR+EH+RSYKAEVDNKE    K+LK +D ++F KT+SKIGRVDSLD
Sbjct: 845  DSLVMNRASLERGMFRSEHVRSYKAEVDNKEAI-GKKLKIEDSVNFGKTQSKIGRVDSLD 903

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDG P+IGANLQSGDI+IGK AESGADHS+KLKHTERG VQKV+LSAND+GKNFAVVSLR
Sbjct: 904  DDGFPFIGANLQSGDIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 963

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT QGIVPD+VINPHAFP+RQTPGQLLEA
Sbjct: 964  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEA 1023

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIA GG  K+ATPF+T S+D I +QLH  G+S+WG ERVYNG+TGE ++ LIFMGP
Sbjct: 1024 ALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMGP 1083

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGAAANLHE
Sbjct: 1084 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE 1143

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM +C KC  +ANVIQR V GG K+RGPYCRFCES + +VKVNVPYGAKLL
Sbjct: 1144 RLFTLSDSSQMHICGKCKNMANVIQRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLL 1202

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKF+TEVC
Sbjct: 1203 CQELFSMGISLKFDTEVC 1220


>ref|XP_010667540.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Beta
            vulgaris subsp. vulgaris]
            gi|731317050|ref|XP_010667543.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Beta vulgaris
            subsp. vulgaris] gi|870867229|gb|KMT18122.1| hypothetical
            protein BVRB_2g031510 [Beta vulgaris subsp. vulgaris]
          Length = 1209

 Score = 1696 bits (4392), Expect = 0.0
 Identities = 812/1163 (69%), Positives = 978/1163 (84%), Gaps = 5/1163 (0%)
 Frame = -2

Query: 4020 ALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGG 3841
            +L  FC+ AA +FF +HGLISHQI+SYN+F+ NGIQ++FD+IGEI V PGYDPSKKG+G 
Sbjct: 53   SLMNFCKKAAAAFFKQHGLISHQINSYNNFVRNGIQKVFDAIGEITVNPGYDPSKKGDGE 112

Query: 3840 WRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVY 3661
            WRYASV+FGK+++E+P FWTGEK   D   +++ L PRHARLQNMTYSAR+KVE +LQ+Y
Sbjct: 113  WRYASVRFGKVELERPMFWTGEKFHADGGDDFIKLLPRHARLQNMTYSARLKVETHLQIY 172

Query: 3660 TQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGG 3481
            +QE ++SDKFKTGK +YV+KK+L ++  DV++GRIPVMVKS++CW++  +KGDC +D GG
Sbjct: 173  SQEKVRSDKFKTGKSEYVDKKILKDDTTDVIVGRIPVMVKSDICWMSEVQKGDCEFDTGG 232

Query: 3480 YFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADG-PCGV 3304
            YF++KG EK FIAQE+ CL RLW+SN P W V Y S FKR+RV+VKL E PKA+    G 
Sbjct: 233  YFIVKGAEKTFIAQEQMCLRRLWVSNDPFWKVAYRSEFKRRRVHVKLVENPKAENIQGGE 292

Query: 3303 KIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCED 3124
            K+I+++FL  + +PIWI+FFALG  SDKEV ++I  +T +  + NI+ A+I DADE CED
Sbjct: 293  KVISVYFLLVE-VPIWILFFALGVESDKEVVELIDCNTDDGRISNILFASIHDADEKCED 351

Query: 3123 FRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYT 2944
            FRK GK+LE++ + I++ KFPP E  +E I+  LFP+L+  K+KA FL YMVKCLL +++
Sbjct: 352  FRK-GKALEYLDKVIRECKFPPAEPTKEFIEANLFPSLSGSKQKARFLAYMVKCLLQAFS 410

Query: 2943 GRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLD 2764
            G+RKCDNRDDFRNKR+E A ELL REL VH++HAE+RM+KAMQRDLYG++ L  IE+YLD
Sbjct: 411  GKRKCDNRDDFRNKRIECASELLERELRVHMRHAEKRMVKAMQRDLYGERDLHAIEQYLD 470

Query: 2763 ASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTG 2584
            ASI+TNGL+R+FSTG+W+HP+KR +R SG+VA LRRTNPLQ + D+RKTRQ+V Y GK G
Sbjct: 471  ASIVTNGLTRSFSTGAWAHPYKRSDRVSGVVANLRRTNPLQSICDMRKTRQQVSYTGKVG 530

Query: 2583 DARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPT----MDKLTFCGMENL 2416
            DAR+P+PS+WGK+CFLSTPDGENCGLVKN+A TG VS NI E      +D L  C ME L
Sbjct: 531  DARYPHPSHWGKICFLSTPDGENCGLVKNIAATGFVSSNIVEDERLLLLDTLAGCKMEKL 590

Query: 2415 DKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRI 2236
               S +SL GK+KV ++G+WVG+C ES +FV++LR  RR++ I  +VEIKRD    EVRI
Sbjct: 591  VNDSCTSLSGKNKVLVDGEWVGVCAESLSFVEELRRKRRKRHISREVEIKRDAQNAEVRI 650

Query: 2235 FSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLF 2056
            F DAGRI+RPLL+VENLKK K +KG + S ++L  + IIELIGVEEEEDC TAWGI+ LF
Sbjct: 651  FCDAGRILRPLLVVENLKKTKLLKGDEFSFETLMDKGIIELIGVEEEEDCRTAWGIKYLF 710

Query: 2055 NEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTN 1876
               +DKG+ ++KYTHCELD+SFLLG+SCGIIPFANH+ ARRVLYQSEKHS QAIG+S+TN
Sbjct: 711  ---EDKGKDAVKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYSSTN 767

Query: 1875 PNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQ 1696
            PNIRVDTL+HQ+YYPQRPLFR++ SDCLG+  Y LG     P+ E+FNGQN IVAVNVH 
Sbjct: 768  PNIRVDTLSHQMYYPQRPLFRSVISDCLGKPGYPLGRSQILPKAEFFNGQNGIVAVNVHL 827

Query: 1695 GYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGR 1516
            GYNQEDSLVMN+ASLERGMFRTEH RSYKAEVDNKE  E KR K  D + F K +SK+GR
Sbjct: 828  GYNQEDSLVMNRASLERGMFRTEHTRSYKAEVDNKESSE-KRRKFDDTVSFGKMQSKLGR 886

Query: 1515 VDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFA 1336
            VDSLDDDG PYIGANLQSGDI+IG+ AESGADHS+KLKHTERG VQKVVLSANDDGKNFA
Sbjct: 887  VDSLDDDGFPYIGANLQSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKNFA 946

Query: 1335 VVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPG 1156
            VVSLRQVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT QGIVPD+VINPHAFP+RQTPG
Sbjct: 947  VVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPG 1006

Query: 1155 QLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEAL 976
            QLLEAALGKGIACGGS+++ATPF+T S++ I +QLHRAG+SRWG ERVYNG+TGE I  L
Sbjct: 1007 QLLEAALGKGIACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTL 1066

Query: 975  IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAA 796
            IFMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+
Sbjct: 1067 IFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAS 1126

Query: 795  ANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPY 616
            ANLHERLF LSD SQM VC+KC  +ANVIQR + GGKKIRGPYCRFCES D +VKVNVPY
Sbjct: 1127 ANLHERLFTLSDSSQMHVCRKCKNIANVIQRAIPGGKKIRGPYCRFCESVDEIVKVNVPY 1186

Query: 615  GAKLLYQELFSVGICLKFETEVC 547
            GAKLL QELFS+GI L+FET++C
Sbjct: 1187 GAKLLCQELFSMGISLRFETQLC 1209


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score = 1694 bits (4386), Expect = 0.0
 Identities = 830/1158 (71%), Positives = 963/1158 (83%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L  FC+ A+  FF ++GLISHQI+SYNDFI  GIQR+FD +GEI VEPGYDPSK+G+G W
Sbjct: 64   LKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDW 123

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            ++ASVKFGK+ +E+P+FW GEK   D  KEYLDL PRHARLQNMTYSAR+ VE ++QVYT
Sbjct: 124  KHASVKFGKVSLERPRFWAGEKFSVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 183

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            ++L++SDKFKTG +Q+V+K+   E+KRDV+IGRIPVMV S LCW+ G +K DC +D GGY
Sbjct: 184  KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGY 243

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCGV-K 3301
            F++KG EK FIAQE+ CL RLW+SN P+W V Y    KR RVY+KLAE  K +   G  K
Sbjct: 244  FIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEK 303

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             + ++F  ++ +PIWI+FFALG SSD+EV  +I +D +++++VNI++A+I DAD+ CEDF
Sbjct: 304  ALTVYFSVAE-MPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDF 362

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK  K+L ++   IK  +FPP+ES+EECI +YLFPNL+  K+KA FLGYMVK LL ++ G
Sbjct: 363  RKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIG 422

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRK DNRDDFRNKRLELAGELL REL  H+KHAERRM+KAMQRDLYGD+ +Q IE YLDA
Sbjct: 423  RRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDA 482

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG W HP+KRMER SG+VAT+RRTNPLQM AD+RKTRQ+V Y GK GD
Sbjct: 483  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGD 542

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGKVCFLSTPDGENCGLVKN+A  GLVS  I +P ++ L  CGM+ L   S 
Sbjct: 543  ARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQKLVDDSA 602

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            +SL GK KV LNG WVGIC +S  FV KLR  RRR  +  QVE+KRD+ QGEVR+FSDAG
Sbjct: 603  TSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRMFSDAG 662

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+V NLKKIK +KGGD   +SL    IIELIG EEEEDC TAWG+E L   DK+
Sbjct: 663  RILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLTADKE 722

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
               P  KYTHCELD+SFLLGLSCGIIPFANH+ ARRVLYQSEKHSQQAIGFST NPNIRV
Sbjct: 723  --NPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRV 780

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DT THQLYYPQRPLFRTM SD LG+  YT   K   PRPEY+NGQ AIVAVNVH GYNQE
Sbjct: 781  DTNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQE 840

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN ASLERGMFR+EH+RSYKAEVDNKE    K+LK +D ++F KT+SKIGRVDSLD
Sbjct: 841  DSLVMNCASLERGMFRSEHVRSYKAEVDNKEAI-GKKLKIEDSVNFGKTQSKIGRVDSLD 899

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDG P+IGANLQSGDI+IGK AESGADHS+KLKHTERG VQKV+LSAND+GKNFAVVSLR
Sbjct: 900  DDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 959

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT QGIVPD+VINPHAFP+RQTPGQLLEA
Sbjct: 960  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEA 1019

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIA GG  K+ATPF+T S+D I +QLH  G+S+WG ERVYNG+TGE  + LIFMGP
Sbjct: 1020 ALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMGQNLIFMGP 1079

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGAAANLHE
Sbjct: 1080 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE 1139

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM VC KC  +ANVIQR V GG K+RGPYCRFCES + +VKVNVPYGAKLL
Sbjct: 1140 RLFTLSDSSQMHVCGKCKNMANVIQRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLL 1198

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKF+TE+C
Sbjct: 1199 CQELFSMGISLKFDTEIC 1216


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score = 1694 bits (4386), Expect = 0.0
 Identities = 830/1158 (71%), Positives = 963/1158 (83%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L  FC+ A+  FF ++GLISHQI+SYNDFI  GIQR+FD +GEI VEPGYDPSK+G+G W
Sbjct: 74   LKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDW 133

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            ++ASVKFGK+ +E+P+FW GEK   D  KEYLDL PRHARLQNMTYSAR+ VE ++QVYT
Sbjct: 134  KHASVKFGKVSLERPRFWAGEKFSVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 193

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            ++L++SDKFKTG +Q+V+K+   E+KRDV+IGRIPVMV S LCW+ G +K DC +D GGY
Sbjct: 194  KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGY 253

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCGV-K 3301
            F++KG EK FIAQE+ CL RLW+SN P+W V Y    KR RVY+KLAE  K +   G  K
Sbjct: 254  FIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEK 313

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             + ++F  ++ +PIWI+FFALG SSD+EV  +I +D +++++VNI++A+I DAD+ CEDF
Sbjct: 314  ALTVYFSVAE-MPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDF 372

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK  K+L ++   IK  +FPP+ES+EECI +YLFPNL+  K+KA FLGYMVK LL ++ G
Sbjct: 373  RKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIG 432

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRK DNRDDFRNKRLELAGELL REL  H+KHAERRM+KAMQRDLYGD+ +Q IE YLDA
Sbjct: 433  RRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDA 492

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG W HP+KRMER SG+VAT+RRTNPLQM AD+RKTRQ+V Y GK GD
Sbjct: 493  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGD 552

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGKVCFLSTPDGENCGLVKN+A  GLVS  I +P ++ L  CGM+ L   S 
Sbjct: 553  ARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLYRCGMQKLVDDSA 612

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            +SL GK KV LNG WVGIC +S  FV KLR  RRR  +  QVE+KRD+ QGEVR+FSDAG
Sbjct: 613  TSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDEQQGEVRMFSDAG 672

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+V NLKKIK +KGGD   +SL    IIELIG EEEEDC TAWG+E L   DK+
Sbjct: 673  RILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLTADKE 732

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
               P  KYTHCELD+SFLLGLSCGIIPFANH+ ARRVLYQSEKHSQQAIGFST NPNIRV
Sbjct: 733  --NPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNIRV 790

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DT THQLYYPQRPLFRTM SD LG+  YT   K   PRPEY+NGQ AIVAVNVH GYNQE
Sbjct: 791  DTNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNVHLGYNQE 850

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN ASLERGMFR+EH+RSYKAEVDNKE    K+LK +D ++F KT+SKIGRVDSLD
Sbjct: 851  DSLVMNCASLERGMFRSEHVRSYKAEVDNKEAI-GKKLKIEDSVNFGKTQSKIGRVDSLD 909

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDG P+IGANLQSGDI+IGK AESGADHS+KLKHTERG VQKV+LSAND+GKNFAVVSLR
Sbjct: 910  DDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 969

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT QGIVPD+VINPHAFP+RQTPGQLLEA
Sbjct: 970  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEA 1029

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIA GG  K+ATPF+T S+D I +QLH  G+S+WG ERVYNG+TGE  + LIFMGP
Sbjct: 1030 ALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMGQNLIFMGP 1089

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGAAANLHE
Sbjct: 1090 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE 1149

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM VC KC  +ANVIQR V GG K+RGPYCRFCES + +VKVNVPYGAKLL
Sbjct: 1150 RLFTLSDSSQMHVCGKCKNMANVIQRSVQGG-KVRGPYCRFCESVEDIVKVNVPYGAKLL 1208

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKF+TE+C
Sbjct: 1209 CQELFSMGISLKFDTEIC 1226


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1687 bits (4369), Expect = 0.0
 Identities = 821/1158 (70%), Positives = 965/1158 (83%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L  FC+ A+  FF ++GLISHQI+SYNDFI  GIQR+FDS+GEI VEPGYDPSK+G+G W
Sbjct: 66   LKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDW 125

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            ++ASVKFGK+ +E+P+FW GEK   D  KEYLDL PRHARLQNMTYSAR+ VE ++QVYT
Sbjct: 126  KHASVKFGKVTLERPKFWAGEKFSADGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYT 185

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            ++L++SDKFKTG +Q+V+K+   E+KRDV+IGRIPVMV S LCW+ G +K DC +D GGY
Sbjct: 186  KKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGY 245

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADG-PCGVK 3301
            F++KG EK FIAQE+ CL RLW+SN P+W+V Y    KRKRVY+KL E  K +    G K
Sbjct: 246  FIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEK 305

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             ++++ L    +PIW++FFALG SSD+EV  +I +D +++++VNI++A+I +AD++CEDF
Sbjct: 306  ALSVYIL--AEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDF 363

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK  K+L ++   IK  KFPP+ES+EECI+ YLFPNL+  K+KA FLGYMVKCLL S+ G
Sbjct: 364  RKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIG 423

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRK DNRDDFRNKRLELAGELL REL  H+KHAERRM+KAMQRDLYGD+ +Q IE YLDA
Sbjct: 424  RRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDA 483

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG W HP+KRMER SG+VATLRRTNPLQM AD+RK+RQ+V Y GK GD
Sbjct: 484  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGD 543

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGK+CFLSTPDGENCGLVKN+A  GLVS  I +P ++ L  CGM+ L     
Sbjct: 544  ARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVDDCA 603

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            +SL GK KV L+G+WVG+C +S  FV KLR  RRR  +  QVE+KRD+ QGEVRIFSD+G
Sbjct: 604  TSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDSG 663

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+V NLKKIK +KGGD   +SL    IIE IG EEEEDC TAWG+E +   DK+
Sbjct: 664  RILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYILKADKE 723

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
               P  KYTHCELD+SFLLGLSCGIIPFANH+ ARRVLYQSEKHSQQAIGFST NPN RV
Sbjct: 724  --NPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRV 781

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DT THQLYYPQRPLFRTM +D LG+   T   K   PRPEYFNGQ AIVAVNVH GYNQE
Sbjct: 782  DTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQE 841

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN+ASLERGMFR+EH+RSYKAEVDNKE    K+LK +D ++F KT+SKIGRVDSLD
Sbjct: 842  DSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSKIGRVDSLD 900

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDG P+IGANLQSGDI+IGK AESGADHS+KLKHTERG VQKV+LSAND+GKNFAVVSLR
Sbjct: 901  DDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 960

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT+QGIVPD+VINPHAFP+RQTPGQLLEA
Sbjct: 961  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1020

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIA GG  K+ATPF+T S+D I +QL   G++RWG ERVYNG+TGE + +LIFMGP
Sbjct: 1021 ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGP 1080

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGAAANLHE
Sbjct: 1081 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE 1140

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM +C KC  +ANVIQR V GG K+RGP+CRFCES + +VKVNVPYGAKLL
Sbjct: 1141 RLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLL 1199

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKF+TE+C
Sbjct: 1200 CQELFSMGISLKFDTEIC 1217


>ref|XP_010046894.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Eucalyptus grandis] gi|629113927|gb|KCW78602.1|
            hypothetical protein EUGRSUZ_C00069 [Eucalyptus grandis]
          Length = 1188

 Score = 1684 bits (4360), Expect = 0.0
 Identities = 823/1158 (71%), Positives = 974/1158 (84%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L +FCR A+ +FF+E+GLISHQI+S+NDFIENGIQ +FDS G+I+VEPGYDPSKKGE  W
Sbjct: 38   LMDFCRKASTAFFHEYGLISHQINSFNDFIENGIQNVFDSFGDIMVEPGYDPSKKGESDW 97

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            RYA V+FGK+ +++PQF +G+K  +   K+YL+L PRHARLQNMTYS+RMKV INLQVYT
Sbjct: 98   RYALVRFGKVTLDRPQF-SGDKLAE-CGKDYLNLLPRHARLQNMTYSSRMKVNINLQVYT 155

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            Q+L++SDKFKTGKEQ+V K+V S++ +DVV+GRIP+MVKS LCW++  EKGDC +D+GGY
Sbjct: 156  QKLVRSDKFKTGKEQFVEKEVTSDQSKDVVVGRIPIMVKSKLCWMSETEKGDCDFDLGGY 215

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCGV-K 3301
            FL+KG EK FIAQE+  L +LWIS+   W + Y S++KRKR+Y+KLA     D   G  K
Sbjct: 216  FLVKGAEKTFIAQEQISLKKLWISDNQGWTIAYRSTWKRKRLYIKLAGNSDVDYVRGEEK 275

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
            ++ ++FL S  I IWI+FFALG SSDKEV ++I     +S +VNI+ A+I +ADE  + F
Sbjct: 276  VLTVYFL-STEISIWILFFALGVSSDKEVVELIDFGHDDSRVVNILFASIHEADEKYKGF 334

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK GK+L  + + IK  KFPP ESIEEC D YLFP+L   K KA +L YMVKCLL +YTG
Sbjct: 335  RKGGKALSEVEKSIKNCKFPPAESIEECFDNYLFPSLTGRKRKARYLAYMVKCLLQAYTG 394

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRKCDN+DDFRNKRL+LAGELL REL V + +A RRM++A+QRDLY D+S+Q IE YLDA
Sbjct: 395  RRKCDNKDDFRNKRLDLAGELLERELRVQILNARRRMMRAIQRDLYPDRSIQDIEHYLDA 454

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG+WSHPFK  ER SG+VATLRRTNPLQ ++D+RK RQ V Y GK GD
Sbjct: 455  SIITNGLSRAFSTGAWSHPFKA-ERISGVVATLRRTNPLQAVSDMRKMRQHVNYTGKVGD 513

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGKVCFLSTPDGENCGLVKN+A TGLVS N  EP  D L  CGME +   S 
Sbjct: 514  ARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGLVSTNSLEPLDDILLDCGMEKVADDSS 573

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            +SL GK K+FLNG WVGIC  S +FV  LRN RRR+ +  QVEIKRD HQGEVRIFSD+G
Sbjct: 574  TSLHGKIKIFLNGDWVGICENSLSFVNNLRNNRRRKELPSQVEIKRDIHQGEVRIFSDSG 633

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+V NL +IK +KG      +L  + I+ELIG EEEEDC TAW ++NLF ED D
Sbjct: 634  RILRPLLVVNNLMRIKALKGDQYDFPTLLNKGIVELIGAEEEEDCCTAWSVKNLFKED-D 692

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
            + +P +KYTHCE D+S+LLGLSCGI+PFANH+ ARRVLY+SEKHSQQ IGFSTTNPNIRV
Sbjct: 693  QNRP-VKYTHCEFDMSYLLGLSCGIVPFANHDHARRVLYESEKHSQQGIGFSTTNPNIRV 751

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DTL+HQLYYPQRPLFRTM SDCLG+Q  +LG K   P+PE++NGQNAIVAVNVH GYNQE
Sbjct: 752  DTLSHQLYYPQRPLFRTMISDCLGKQGNSLGNKGMLPKPEFYNGQNAIVAVNVHLGYNQE 811

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN+AS+ERGMFR+EHIRSYKA+V+NKE  + K+ + +D I+F K +SKIGRVDSLD
Sbjct: 812  DSLVMNRASMERGMFRSEHIRSYKADVENKES-QQKKHRSEDSINFGKMQSKIGRVDSLD 870

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDGLP++GAN+QSGDIVIG+ AESGADHSIKLKHTERG VQKVVLSANDDGKNFAVVSLR
Sbjct: 871  DDGLPFVGANMQSGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSANDDGKNFAVVSLR 930

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKF+SMHGQKGV+GFLESQEN PFT+QGIVPDVVINPHAFP+RQTPGQLLEA
Sbjct: 931  QVRSPCLGDKFASMHGQKGVLGFLESQENFPFTVQGIVPDVVINPHAFPSRQTPGQLLEA 990

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIA GG +K+ATPF+T S++ I +QLHRAG+SRWG ERVYNG+TGE + +LIFMGP
Sbjct: 991  ALGKGIALGGPVKYATPFSTPSVEDITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGP 1050

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHE
Sbjct: 1051 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 1110

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM VCQKC  +ANVIQR V GG+KIRGPYCR C+SAD +VKVNVPYGAKLL
Sbjct: 1111 RLFTLSDSSQMHVCQKCKNMANVIQRPVPGGRKIRGPYCRTCDSADDIVKVNVPYGAKLL 1170

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKF+T++C
Sbjct: 1171 CQELFSMGISLKFDTQLC 1188


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score = 1682 bits (4356), Expect = 0.0
 Identities = 819/1158 (70%), Positives = 964/1158 (83%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L  FC+ A+  FF ++GLISHQI+SYNDFI  GIQR+FDS+GEI VEPGYDPSK+G+G W
Sbjct: 66   LKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDW 125

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            ++ASVKFGK+ +E+P+FW GEK   D  KEYLDL PRHARLQNMTYSAR+ VE ++QVYT
Sbjct: 126  KHASVKFGKVTLERPKFWAGEKFSVDGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYT 185

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            ++L++SDKFKTG +++V+K+   E+KRDV+IGRIPVMV S LCW+ G +K DC +D GGY
Sbjct: 186  KKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGY 245

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADG-PCGVK 3301
            F++KG EK FIAQE+ CL RLW+SN P+W+V Y    KRKRVY+KL E  K +    G K
Sbjct: 246  FIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEK 305

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             ++++ L    +PIW++FFALG SSD+EV  +I +D +++++VNI++A+I +AD++CEDF
Sbjct: 306  ALSVYIL--AEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDF 363

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK  K+L ++   IK  KFPP+ES+EECI+ YLFPNL+  K+KA FLGYMVKCLL S+ G
Sbjct: 364  RKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIG 423

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRK DNRDDFRNKRLELAGELL REL  H+KHAERRM+KAMQRDLYGD+ +Q IE YLDA
Sbjct: 424  RRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDA 483

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG W HP+KRMER SG+VATLRRTNPLQM AD+RK+RQ+V Y GK GD
Sbjct: 484  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGD 543

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGK+CFLSTPDGENCGLVKN+A  GLVS  I +P ++ L  CGM+ L     
Sbjct: 544  ARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVDDCS 603

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            +SL GK KV L+G+WVG+C +S  FV KLR  RRR  +  QVE+KRD+ QGEVRIFSD G
Sbjct: 604  TSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFSDPG 663

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+V NLKKIK +KGGD   +SL    IIELIG EEEEDC TAWG+E +   DK+
Sbjct: 664  RILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKADKE 723

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
               P  KYTHCELD+SFLLGLSCGIIPFANH+ ARRVLYQSEKHSQQAIGFST NPN RV
Sbjct: 724  --NPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNRV 781

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DT THQLYYPQRPLFRTM +D LG+       K   PRPEYFNGQ AIVAVNVH GYNQE
Sbjct: 782  DTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQE 841

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN+ASLERGMFR+EH+RSYKAEVDNKE    K+LK +D ++F KT+SKIGRVDSLD
Sbjct: 842  DSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSKIGRVDSLD 900

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDG P+IGANLQSGDI+IGK +ESGADHS+KLKHTERG VQKV+LSAND+GKNFAVVSLR
Sbjct: 901  DDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 960

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT+QGIVPD+VINPHAFP+RQTPGQLLEA
Sbjct: 961  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1020

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIA GG  K+ATPF+T S+D I +QL   G++RWG ERVYNG+TGE + +LIFMGP
Sbjct: 1021 ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGP 1080

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGAAANLHE
Sbjct: 1081 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE 1140

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM +C KC  +ANVIQR V GG K+RGP+CRFCES + +VKVNVPYGAKLL
Sbjct: 1141 RLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCESVEDIVKVNVPYGAKLL 1199

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKF+TE+C
Sbjct: 1200 CQELFSMGISLKFDTEIC 1217


>ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [Sorghum bicolor]
            gi|241922081|gb|EER95225.1| hypothetical protein
            SORBIDRAFT_01g042100 [Sorghum bicolor]
          Length = 1228

 Score = 1673 bits (4332), Expect = 0.0
 Identities = 800/1162 (68%), Positives = 977/1162 (84%), Gaps = 1/1162 (0%)
 Frame = -2

Query: 4029 TVEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKG 3850
            +VE+L +FC++A+RSFF+E GLISHQI+SYNDF+ +G+Q +FDS+GE++VEPGYDPSKKG
Sbjct: 82   SVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQELFDSLGEVIVEPGYDPSKKG 141

Query: 3849 EGGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINL 3670
             GGW++A +KFG++K+EKP FWTG+          +D  P HARLQNMTY++R+ VE+N+
Sbjct: 142  SGGWKHAIIKFGRVKLEKPVFWTGKDEGS------VDFKPWHARLQNMTYASRLIVEVNI 195

Query: 3669 QVYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYD 3490
            QVY+ E  KSDK KTG + +V K+    E   + IG +PVMVKSNLC L   ++ +CL+D
Sbjct: 196  QVYSLE--KSDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNLCLLHSLKESECLFD 253

Query: 3489 IGGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPC 3310
             GGYFL+KGMEK FIAQE RCL RLWI ++P W++ + S  KR+R+Y+KL E  +++   
Sbjct: 254  AGGYFLVKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRIYIKLVESTRSEDFS 313

Query: 3309 GVKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHC 3130
            G KII+I FLY+ ++P+W++FFALG SSDKE   +I +   ++S++N + ATI ++DE C
Sbjct: 314  GSKIISISFLYA-TMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDELC 372

Query: 3129 EDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLS 2950
            E FRK  K+ +++ E +K ++FPP ES ++ I ++LFP+++ ++ KALFLGYMVKCLL++
Sbjct: 373  EGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYMVKCLLMA 432

Query: 2949 YTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERY 2770
            +TG+RKCDN+DDFRNKRL+L GELL REL  HL+ AE+RM+KA+QRDL  D+ LQ +ERY
Sbjct: 433  FTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDRELQDLERY 492

Query: 2769 LDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGK 2590
            +DASI+TNGLSRAFSTGSW HP+KR ERCSGIVATLRRTNPLQMM+DLRKTRQRV Y GK
Sbjct: 493  IDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGK 552

Query: 2589 TGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDK 2410
             GDAR+PNPSYWGK+CF+STPDGENCGLVKN+AVT +VS  + +P ++    CGM  L+ 
Sbjct: 553  AGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIESFISCGMSKLND 612

Query: 2409 VSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFS 2230
            +    +   DK+FLNG WVG C +S +FV +LR MRR   I PQVEIKRD+H  EVR+FS
Sbjct: 613  IPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEIKRDKHHKEVRVFS 672

Query: 2229 DAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNE 2050
            DAGRI+RPLL+VENLKKI++ KG   S + L +++IIE IGVEEEED   AWGI +LF  
Sbjct: 673  DAGRILRPLLVVENLKKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFES 732

Query: 2049 DKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPN 1870
            +   G  S  YTHCELD SFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIG+STTNP+
Sbjct: 733  E---GAIS-SYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPH 788

Query: 1869 IRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYT-LGYKNTPPRPEYFNGQNAIVAVNVHQG 1693
            IRVDTL+HQLYYPQRPLF+T+ +DCLGR DYT  G K+   RPEYFNGQNAIVAVNVHQG
Sbjct: 789  IRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFNGQNAIVAVNVHQG 848

Query: 1692 YNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRV 1513
            +NQEDSLVMN+ASLERGMFRTEH+RSYKA+V+NK+   TKRLK K+KIDF KTESK GRV
Sbjct: 849  FNQEDSLVMNRASLERGMFRTEHLRSYKADVENKD--GTKRLKLKEKIDFGKTESKRGRV 906

Query: 1512 DSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAV 1333
            D+LDDDGLPYIGA+LQ+ DIVIGK +ESG DHSIKLKHTE+G VQKV+LSAND+GKNFAV
Sbjct: 907  DNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQKVLLSANDEGKNFAV 966

Query: 1332 VSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQ 1153
            V+LRQVR+PCLGDKFSSMHGQKGVVGFLESQEN PFT +GIVPD+VINPHAFPTRQTPGQ
Sbjct: 967  VTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHKGIVPDIVINPHAFPTRQTPGQ 1026

Query: 1152 LLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALI 973
            LLEAALGKGIAC G++++ATPF TAS+D+I +QLHRAGYSRWG E V NG+TGE++++LI
Sbjct: 1027 LLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGTENVLNGRTGERMQSLI 1086

Query: 972  FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAA 793
            FMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHG+AA
Sbjct: 1087 FMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGSAA 1146

Query: 792  NLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYG 613
            NLHERLFMLSD+SQM +CQ C RVANV+ R VSGGKKIRGPYC FC+S++++V++NVPYG
Sbjct: 1147 NLHERLFMLSDFSQMHICQTCERVANVVMRSVSGGKKIRGPYCGFCKSSENIVRINVPYG 1206

Query: 612  AKLLYQELFSVGICLKFETEVC 547
            AKLLYQELFS+GICLKF+TEVC
Sbjct: 1207 AKLLYQELFSMGICLKFDTEVC 1228


>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
            gi|670371411|ref|XP_008666978.1| PREDICTED: required to
            maintain repression7 isoform X1 [Zea mays]
            gi|283443696|gb|ADB19857.1| required to maintain
            repression 7/RNA polymerase D second largest subunit [Zea
            mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
            gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
            RNA polymerase subunit family protein [Zea mays]
          Length = 1229

 Score = 1663 bits (4306), Expect = 0.0
 Identities = 796/1177 (67%), Positives = 976/1177 (82%), Gaps = 9/1177 (0%)
 Frame = -2

Query: 4050 GEGSSGP--------TVEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSI 3895
            G+ SS P        +VE+L +FC++A+RSFF+E GLISHQI+SYN+F+ +G+Q +FDS+
Sbjct: 68   GKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSL 127

Query: 3894 GEIVVEPGYDPSKKGEGGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARL 3715
            GE++VEPGYDPSKKG GGW++A +KFG++K+EKP FWTG+          +D  P HARL
Sbjct: 128  GEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEGS------VDFKPWHARL 181

Query: 3714 QNMTYSARMKVEINLQVYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSN 3535
            QNMTY++R+ VE+ +QVY+ E  KSDK KTG + +V K+    E   + IG +PVMVKSN
Sbjct: 182  QNMTYASRLIVEVTIQVYSLE--KSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSN 239

Query: 3534 LCWLAGNEKGDCLYDIGGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKR 3355
            LC L    + +CL+D GGYFL+KGMEK FIAQE+RCL RLWIS++P W + + S  KR+R
Sbjct: 240  LCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRR 299

Query: 3354 VYVKLAEPPKADGPCGVKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSL 3175
            +Y+KL E  +++     KII I FLY+ ++P+W++FFALG SSDKEV  MI +   ++S+
Sbjct: 300  IYIKLVESTRSEDFSESKIITISFLYA-TMPVWLLFFALGISSDKEVFDMIDMQDCDASV 358

Query: 3174 VNIVLATISDADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKE 2995
            +N + ATI ++D+ CEDFRK  K+ +++ E +K ++FPP ES ++ I ++LFP+++ ++ 
Sbjct: 359  INTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRN 418

Query: 2994 KALFLGYMVKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQ 2815
            KALFLGYMVKCLL+++TG+RKCDN+DDFRNKRL+L GELL REL   L+ AE+RM+KA+Q
Sbjct: 419  KALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQ 478

Query: 2814 RDLYGDKSLQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMM 2635
            RDL  D+ LQ +ERY+DASI+TNGL+RAFSTGSW HP+KR ERCSGIVATLRRTNPLQMM
Sbjct: 479  RDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMM 538

Query: 2634 ADLRKTRQRVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEP 2455
            +DLRKTRQRV Y GK GDAR+PNPSYWGK+CF+STPDGENCGLVKN+AVT +VS  + +P
Sbjct: 539  SDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQP 598

Query: 2454 TMDKLTFCGMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQV 2275
             ++    CGM  L+ +    +   DK+FLNG WVG C  S +FV +LR MRR   I PQV
Sbjct: 599  LIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQV 658

Query: 2274 EIKRDQHQGEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEE 2095
            EIKRD+H  EVR+F+DAGRI+RPLL+VENL KI++ KG   S   L +++IIE IGVEEE
Sbjct: 659  EIKRDKHHNEVRVFTDAGRILRPLLVVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEE 718

Query: 2094 EDCITAWGIENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 1915
            ED   AWGI +LF  +   G  S  YTHCELD SFLLGLSCGIIPFANHNFARRVLYQSE
Sbjct: 719  EDIQCAWGIRHLFESE---GAIS-SYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSE 774

Query: 1914 KHSQQAIGFSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDY-TLGYKNTPPRPEY 1738
            KHSQQAIG+STTNP+IRVDTL+HQLYYPQRPLF+T+ +DCLGR DY + G KN   RPEY
Sbjct: 775  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEY 834

Query: 1737 FNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPK 1558
            FNGQNAIVAVNVHQG+NQEDSLVMN+ASLERGMFRTEH+RSYKA+V+NK+   TKRLK K
Sbjct: 835  FNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKD--GTKRLKLK 892

Query: 1557 DKIDFAKTESKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQ 1378
            +KIDF KTESK GRVD+LDDDGLPY+GA+LQ+ DIVIGK +ESG DHSIKLKHTE+G VQ
Sbjct: 893  EKIDFGKTESKRGRVDNLDDDGLPYVGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQ 952

Query: 1377 KVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDV 1198
            KV+LSAND+GKNFAVV+LRQVR+PCLGDKFSSMHGQKGVVGFLESQEN PFT +GIVPD+
Sbjct: 953  KVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDI 1012

Query: 1197 VINPHAFPTRQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRE 1018
            VINPHAFPTRQTPGQLLEAALGKGIAC G++++ATPF TAS+D+I +QLHRAGYSRWG E
Sbjct: 1013 VINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGSE 1072

Query: 1017 RVYNGQTGEKIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 838
             V NG+TGE++++L+FMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKF
Sbjct: 1073 NVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1132

Query: 837  GEMERDCLLAHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRF 658
            GEMERDCLLAHG+AANLHERLF+LSD+SQM +CQ C RVANV+ R V GGKKIRGPYC F
Sbjct: 1133 GEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGF 1192

Query: 657  CESADSVVKVNVPYGAKLLYQELFSVGICLKFETEVC 547
            C+S++++V++NVPYGAKLLYQELFS+GICLKFET+VC
Sbjct: 1193 CKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229


>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] gi|802626342|ref|XP_012076430.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
            hypothetical protein JCGZ_07086 [Jatropha curcas]
          Length = 1209

 Score = 1662 bits (4305), Expect = 0.0
 Identities = 814/1158 (70%), Positives = 963/1158 (83%), Gaps = 1/1158 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L +FC+ AA  FFNE+GLISHQI+SYNDFI NG+Q+ FDS GE+VVEPGYDPSKKGE  W
Sbjct: 63   LKDFCKRAATLFFNEYGLISHQINSYNDFIGNGLQKAFDSFGELVVEPGYDPSKKGENEW 122

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            RYASV+FGK+ ++KP FW G    D       ++ PRHARLQNMTYS+RMKV + ++VYT
Sbjct: 123  RYASVRFGKVTLDKPSFWGGSDGTDH------NMLPRHARLQNMTYSSRMKVNVTVEVYT 176

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            Q++I+SDKFKTGK+Q+V+K VLS + RD++IGRIPVMVKS+LCW+   E+ DC +D GGY
Sbjct: 177  QKVIRSDKFKTGKDQFVDKVVLSTDNRDIIIGRIPVMVKSDLCWMKTAERSDCDFDHGGY 236

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCGVKI 3298
            FLIKG EK FIAQE+ CL RLWISN  SW V Y S  KR R+ V+L +  K +   G K 
Sbjct: 237  FLIKGAEKVFIAQEQVCLKRLWISNIQSWTVSYKSEIKRNRLIVRLVDLSKVEDIKGEKK 296

Query: 3297 -INIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             +N++FL S  IP+WI+FFALG +SDKEV  +I  +T+++S+VNI  A+I DADE CE F
Sbjct: 297  GLNVYFL-STEIPLWILFFALGITSDKEVIDLIDYNTEDASIVNIFFASIHDADEKCEGF 355

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            R   ++L ++ +QI+  +FPP E+ E+CI  YLFP+L S ++KA FLGYMVKCLL +Y+G
Sbjct: 356  RNDREALGYVIKQIQGTRFPPGET-EDCISLYLFPSLHSPRQKARFLGYMVKCLLQAYSG 414

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            +RKCDNRD FRNKR ELAGELL REL VH+ HA RRM KA+Q+DLYGD+ ++ IE YLDA
Sbjct: 415  QRKCDNRDSFRNKRFELAGELLDRELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDA 474

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SI+TNGLSRAFSTG+WSHPFKRMER SG+VA L RTNPLQ M DLRKTRQ+V Y GK GD
Sbjct: 475  SIVTNGLSRAFSTGAWSHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQQVQYTGKVGD 534

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WG+VCFLSTPDGENCGLVKN+A+TGLVS  I EP +D L  CGM+ L   + 
Sbjct: 535  ARYPHPSHWGRVCFLSTPDGENCGLVKNLAITGLVSTEILEPLIDILFDCGMDKLVDDTH 594

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            + LD K KVFLNG+WVG+C +S+ FV +LR +RRR+ +  QVEIKRD+ Q EVRIF+DAG
Sbjct: 595  TKLDEKYKVFLNGEWVGVCEDSNLFVAELRRLRRRKKLPRQVEIKRDEQQKEVRIFADAG 654

Query: 2220 RIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFNEDKD 2041
            RI+RPLL+VENL KIK  KGG+ + +SL  + IIE IG EEEEDC TAWGI+ L     D
Sbjct: 655  RILRPLLVVENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGIKFLV-AGVD 713

Query: 2040 KGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNPNIRV 1861
            K QP LKYTHCELD+SFLLGLSCGIIPFANH+ ARRVLYQ++KHSQQAIGF TTNPNIRV
Sbjct: 714  KKQP-LKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRV 772

Query: 1860 DTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQGYNQE 1681
            DTL+HQL+YPQRPLFRT+T+DCLG+  Y  G+    P+PE FNGQNAIVAVNVH GYNQE
Sbjct: 773  DTLSHQLHYPQRPLFRTVTADCLGKPGYARGHHGMLPKPELFNGQNAIVAVNVHLGYNQE 832

Query: 1680 DSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRVDSLD 1501
            DSLVMN+ASLERGMFR+EHIRSYKA+VDNKE+ + KR K +D ++F K +SKIGRVDSLD
Sbjct: 833  DSLVMNRASLERGMFRSEHIRSYKADVDNKELLD-KRRKFEDTVNFGKIQSKIGRVDSLD 891

Query: 1500 DDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLR 1321
            DDG P+IGANLQSGDIVIG+ AESGADHSIKLKHTERG VQKVVLS+ND+GKNFAVVSLR
Sbjct: 892  DDGFPFIGANLQSGDIVIGRFAESGADHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLR 951

Query: 1320 QVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQLLEA 1141
            QVRSPCLGDKFSSMHGQKGV+GFLESQEN PFT  G+VPD+VINPHAFP+RQTPGQLLEA
Sbjct: 952  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKDGVVPDIVINPHAFPSRQTPGQLLEA 1011

Query: 1140 ALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALIFMGP 961
            ALGKGIACGG +++ATPF+T S++ I DQLHRAG+SRWG E+V NG+TGE + +LIFMGP
Sbjct: 1012 ALGKGIACGGPMRYATPFSTLSVEAITDQLHRAGFSRWGNEKVCNGRTGEMVRSLIFMGP 1071

Query: 960  TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHE 781
            TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHE
Sbjct: 1072 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 1131

Query: 780  RLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYGAKLL 601
            RLF LSD SQM +CQ C  VANVI+R V   +KIR PYCR CESAD +VKVNVPYGAKLL
Sbjct: 1132 RLFTLSDSSQMHICQNCKNVANVIERTVPPSRKIRAPYCRICESADDIVKVNVPYGAKLL 1191

Query: 600  YQELFSVGICLKFETEVC 547
             QELFS+GI LKFET++C
Sbjct: 1192 CQELFSMGISLKFETQLC 1209


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1662 bits (4305), Expect = 0.0
 Identities = 812/1162 (69%), Positives = 958/1162 (82%), Gaps = 5/1162 (0%)
 Frame = -2

Query: 4017 LSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSIGEIVVEPGYDPSKKGEGGW 3838
            L  FC+ A+  FF ++G+ISHQI SYNDFI  GIQR+FDS+GEI VEPGYDPSKKGEG W
Sbjct: 64   LRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGEW 123

Query: 3837 RYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARLQNMTYSARMKVEINLQVYT 3658
            ++ASVKFGK+ +++P+FW GEK      +EYLDL PRHARLQNMTYSAR+ VE ++QV+T
Sbjct: 124  KHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLDLWPRHARLQNMTYSARIIVETHVQVFT 183

Query: 3657 QELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSNLCWLAGNEKGDCLYDIGGY 3478
            ++L++SDKFKTG EQ+V+K+ + E+KRDV IGRIPVMV S LCW++G ++ DC +D GGY
Sbjct: 184  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHGGY 243

Query: 3477 FLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKRVYVKLAEPPKADGPCG-VK 3301
            F++KG EK FIAQE+ CL RLW+SN  +W+V Y S  KR RVY+KL E  K +   G  K
Sbjct: 244  FIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAK 303

Query: 3300 IINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSLVNIVLATISDADEHCEDF 3121
             ++++FL    +PIW++FFALG SSD+E+  +I +D K+++++NI++A+I DAD++CEDF
Sbjct: 304  ALSVYFL--AEMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADKNCEDF 361

Query: 3120 RKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKEKALFLGYMVKCLLLSYTG 2941
            RK  K+L ++   IK  KFPP+ES+EECI +YLFPNL+  K+KA FLGYMVKCLLLSY G
Sbjct: 362  RKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIG 421

Query: 2940 RRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQRDLYGDKSLQFIERYLDA 2761
            RRK DNRDDFRNKRL+LAGELL REL  H+KHAERRM+KA+QRDL GD+ +Q +E YLDA
Sbjct: 422  RRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYLDA 481

Query: 2760 SIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMMADLRKTRQRVLYIGKTGD 2581
            SIITNGLSRAFSTG W HP+KRMER SG+VATLRRTNPLQM ADLRKTRQ+V Y GK GD
Sbjct: 482  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGD 541

Query: 2580 ARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEPTMDKLTFCGMENLDKVSP 2401
            AR+P+PS+WGKVCFLSTPDGENCGLVKN+A  GLVS  + +P ++ L  CGM+ L   S 
Sbjct: 542  ARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQKLVDDSA 601

Query: 2400 SSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQVEIKRDQHQGEVRIFSDAG 2221
            +SL GK KV L+G WVG+C +S  FV KLR  RRR  +  QVE+KRD+ Q EVRIFSDAG
Sbjct: 602  TSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAG 661

Query: 2220 RIMRPLLIVENLKKIKRI----KGGDISLKSLFKEKIIELIGVEEEEDCITAWGIENLFN 2053
            RIMRPLL+V NLK IK +    KGGD   ++L  + IIELIG EEEEDC TAWG+E L  
Sbjct: 662  RIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLK 721

Query: 2052 EDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFSTTNP 1873
             DK+   P + YTHCELD+SFLLGLSCG+IPFANH+ ARRVLYQSEKHSQQAIGFST NP
Sbjct: 722  ADKE--NPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNP 779

Query: 1872 NIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYTLGYKNTPPRPEYFNGQNAIVAVNVHQG 1693
            N RVDT THQLYYPQRPLF TM SD LG+       K    RPEY+NGQ AIVAVNVH G
Sbjct: 780  NARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHLG 839

Query: 1692 YNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPKDKIDFAKTESKIGRV 1513
            YNQEDS+VMN+ASLERGMFR+EH+RSYKAEVDNKE    K+ K +D ++F KT+SKIGRV
Sbjct: 840  YNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAM-GKKSKVEDSVNFGKTQSKIGRV 898

Query: 1512 DSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAV 1333
            DSLDDDG P+IGANLQSGDI+IGK AESGADHS+K+KHTERG VQKV+LSANDDGKNFAV
Sbjct: 899  DSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAV 958

Query: 1332 VSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDVVINPHAFPTRQTPGQ 1153
            VSLRQVRSPCLGDKFSSMHGQKGV+G+LESQEN PFT+QGIVPD+VINPHAFP+RQTPGQ
Sbjct: 959  VSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQ 1018

Query: 1152 LLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRERVYNGQTGEKIEALI 973
            LLEAALGKGIA GG  K+ATPF+  S+D I  QLH  G+SRWG ERVYNG+TGE + +LI
Sbjct: 1019 LLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHSLI 1078

Query: 972  FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAA 793
            FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGAAA
Sbjct: 1079 FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 1138

Query: 792  NLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRFCESADSVVKVNVPYG 613
            NLHERLF LSD SQM +C KC  +ANVIQR   GG KIRGP+CRFCES + +VKV+VPYG
Sbjct: 1139 NLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCESVEDIVKVDVPYG 1197

Query: 612  AKLLYQELFSVGICLKFETEVC 547
            AKLL QELFS+GI LKF+TE+C
Sbjct: 1198 AKLLCQELFSMGISLKFDTEIC 1219


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score = 1660 bits (4298), Expect = 0.0
 Identities = 795/1177 (67%), Positives = 975/1177 (82%), Gaps = 9/1177 (0%)
 Frame = -2

Query: 4050 GEGSSGP--------TVEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSI 3895
            G+ SS P        +VE+L +FC++A+RSFF+E GLISHQI+SYN+F+ +G+Q +FDS+
Sbjct: 68   GKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSL 127

Query: 3894 GEIVVEPGYDPSKKGEGGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARL 3715
            GE++VEPGYDPSKKG GGW++A +KFG++K+EKP FWTG+          +D  P HARL
Sbjct: 128  GEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEGS------VDFKPWHARL 181

Query: 3714 QNMTYSARMKVEINLQVYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSN 3535
            QNMTY++R+ VE+ +QVY+ E  KSDK KTG + +V K+    E   + IG +PVMVKSN
Sbjct: 182  QNMTYASRLIVEVTIQVYSLE--KSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSN 239

Query: 3534 LCWLAGNEKGDCLYDIGGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKR 3355
            LC L    + +CL+D GGYFL+KGMEK FIAQE+RCL RLWIS++P W + + S  KR+R
Sbjct: 240  LCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRRR 299

Query: 3354 VYVKLAEPPKADGPCGVKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSL 3175
            +Y+KL E  +++     KII I FLY+ ++P+W++FFALG SSDKEV  MI +   ++S+
Sbjct: 300  IYIKLVESTRSEDFSESKIITISFLYA-TMPVWLLFFALGISSDKEVFDMIDMQDCDASV 358

Query: 3174 VNIVLATISDADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKE 2995
            +N + ATI ++D+ CEDFRK  K+ +++ E +K ++FPP ES ++ I ++LFP+++ ++ 
Sbjct: 359  INTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRN 418

Query: 2994 KALFLGYMVKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQ 2815
            KALFLGYMVKCLL+++TG+RKCDN+DDFRNKRL+L GELL REL   L+ AE+RM+KA+Q
Sbjct: 419  KALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQ 478

Query: 2814 RDLYGDKSLQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMM 2635
            RDL  D+ LQ +ERY+DASI+TNGL+RAFSTGSW HP+KR ERCSGIVATLRRTNPLQMM
Sbjct: 479  RDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMM 538

Query: 2634 ADLRKTRQRVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEP 2455
            +DLRKTRQRV Y GK GDAR+PNPSYW K+CF+STPDGENCGLVKN+AVT +VS  + +P
Sbjct: 539  SDLRKTRQRVAYAGKAGDARYPNPSYWEKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQP 598

Query: 2454 TMDKLTFCGMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQV 2275
             ++    CGM  L+ +    +   DK+FLNG WVG C  S +FV +LR MRR   I PQV
Sbjct: 599  LIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQV 658

Query: 2274 EIKRDQHQGEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEE 2095
            EIKRD+H  EVR+F+DAGRI+RPLL+VENL KI++ KG   S   L +++IIE IGVEEE
Sbjct: 659  EIKRDKHHNEVRVFTDAGRILRPLLVVENLNKIRKPKGRSFSFHELMQQEIIEFIGVEEE 718

Query: 2094 EDCITAWGIENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 1915
            ED   AWGI +LF  +   G  S  YTHCELD SFLLGLSCGIIPFANHNFARRVLYQSE
Sbjct: 719  EDIQCAWGIRHLFESE---GAIS-SYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSE 774

Query: 1914 KHSQQAIGFSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDY-TLGYKNTPPRPEY 1738
            KHSQQAIG+STTNP+IRVDTL+HQLYYPQRPLF+T+ +DCLGR DY + G KN   RPEY
Sbjct: 775  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEY 834

Query: 1737 FNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPK 1558
            FNGQNAIVAVNVHQG+NQEDSLVMN+ASLERGMFRTEH+RSYKA+V+NK+   TKRLK K
Sbjct: 835  FNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKD--GTKRLKLK 892

Query: 1557 DKIDFAKTESKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQ 1378
            +KIDF KTESK GRVD+LDDDGLPY+GA+LQ+ DIVIGK +ESG DHSIKLKHTE+G VQ
Sbjct: 893  EKIDFGKTESKRGRVDNLDDDGLPYVGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQ 952

Query: 1377 KVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDV 1198
            KV+LSAND+GKNFAVV+LRQVR+PCLGDKFSSMHGQKGVVGFLESQEN PFT +GIVPD+
Sbjct: 953  KVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDI 1012

Query: 1197 VINPHAFPTRQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRE 1018
            VINPHAFPTRQTPGQLLEAALGKGIAC G++++ATPF TAS+D+I +QLHRAGYSRWG E
Sbjct: 1013 VINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHRAGYSRWGSE 1072

Query: 1017 RVYNGQTGEKIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 838
             V NG+TGE++++L+FMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKF
Sbjct: 1073 NVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1132

Query: 837  GEMERDCLLAHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRF 658
            GEMERDCLLAHG+AANLHERLF+LSD+SQM +CQ C RVANV+ R V GGKKIRGPYC F
Sbjct: 1133 GEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGF 1192

Query: 657  CESADSVVKVNVPYGAKLLYQELFSVGICLKFETEVC 547
            C+S++++V++NVPYGAKLLYQELFS+GICLKFET+VC
Sbjct: 1193 CKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229


>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
            gi|241938382|gb|EES11527.1| hypothetical protein
            SORBIDRAFT_06g030300 [Sorghum bicolor]
          Length = 1239

 Score = 1659 bits (4296), Expect = 0.0
 Identities = 792/1177 (67%), Positives = 976/1177 (82%), Gaps = 9/1177 (0%)
 Frame = -2

Query: 4050 GEGSSGP--------TVEALSEFCRDAARSFFNEHGLISHQISSYNDFIENGIQRIFDSI 3895
            G+ SS P        +VE+L +FC++A+RSFF+E GLISHQI+SYN+F+ +G+Q +FDS+
Sbjct: 78   GKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSL 137

Query: 3894 GEIVVEPGYDPSKKGEGGWRYASVKFGKIKIEKPQFWTGEKPQDDLRKEYLDLTPRHARL 3715
            GE++VEPGYDPSKKG GGW++A +KFG++K+EKP FWTG+          +D  P HARL
Sbjct: 138  GEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGKDEGS------VDFKPWHARL 191

Query: 3714 QNMTYSARMKVEINLQVYTQELIKSDKFKTGKEQYVNKKVLSEEKRDVVIGRIPVMVKSN 3535
            QNMTY++R+KVE+ +QVY+ E  KSDK KTG E +V K+    E   + IG +PVMVKSN
Sbjct: 192  QNMTYASRLKVEVTIQVYSLE--KSDKSKTGNEGFVQKRNFMNETHWIFIGLLPVMVKSN 249

Query: 3534 LCWLAGNEKGDCLYDIGGYFLIKGMEKAFIAQEERCLTRLWISNKPSWIVQYPSSFKRKR 3355
            LC L   ++ +CL+D GGYFL+KGMEK FIAQE+RCL RLW+S++P W++ +    KR+R
Sbjct: 250  LCLLHSLKESECLFDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRRR 309

Query: 3354 VYVKLAEPPKADGPCGVKIINIHFLYSQSIPIWIMFFALGASSDKEVCQMIGLDTKESSL 3175
            +Y+KL E  +++   G K+I+I FLY+ ++P+W++FFALG SSDKE   +I +   ++S+
Sbjct: 310  IYIKLVESTRSEDFSGSKVISISFLYA-TMPVWLLFFALGISSDKEAFDVIDMQDCDASV 368

Query: 3174 VNIVLATISDADEHCEDFRKQGKSLEFISEQIKKAKFPPEESIEECIDKYLFPNLASHKE 2995
            +N + ATI ++DE C+ FRK  K+ +++ E +K ++FPP ES ++ + ++LFP++  ++ 
Sbjct: 369  INTISATIKESDELCKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLFPDINGNRN 428

Query: 2994 KALFLGYMVKCLLLSYTGRRKCDNRDDFRNKRLELAGELLSRELWVHLKHAERRMIKAMQ 2815
            KA FLGYMVKCLL+++TG+RKCDN+DDFRNKRL+L GELL REL   L+  ERRM+KA+Q
Sbjct: 429  KAFFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQ 488

Query: 2814 RDLYGDKSLQFIERYLDASIITNGLSRAFSTGSWSHPFKRMERCSGIVATLRRTNPLQMM 2635
            RDL  D+ LQ +ERY+DASI+TNGL+RAFSTGSW HP+KR ERCSGIVATLRRTNPLQMM
Sbjct: 489  RDLNNDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMM 548

Query: 2634 ADLRKTRQRVLYIGKTGDARFPNPSYWGKVCFLSTPDGENCGLVKNMAVTGLVSMNITEP 2455
            +DLRKTRQRV Y GK GDAR+PNPSYWGK+CFLSTPDGENCGLVKN+AVT +VS  + +P
Sbjct: 549  SDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQP 608

Query: 2454 TMDKLTFCGMENLDKVSPSSLDGKDKVFLNGKWVGICGESHTFVKKLRNMRRRQWIHPQV 2275
             ++    CGM  L+ +    +   DK+FLNG WVG C +S +FV +LR MRR   I PQV
Sbjct: 609  LIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSMIDPQV 668

Query: 2274 EIKRDQHQGEVRIFSDAGRIMRPLLIVENLKKIKRIKGGDISLKSLFKEKIIELIGVEEE 2095
            EIKRD+H  EVR+FSDAGRI+RPLL+VENL KI++ KG   S + L +++IIE IGVEEE
Sbjct: 669  EIKRDKHHKEVRVFSDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEE 728

Query: 2094 EDCITAWGIENLFNEDKDKGQPSLKYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 1915
            ED   AWGI +LF  +   G  S  YTHCELD SFL+GLSCGIIPFANHNFARRVLYQSE
Sbjct: 729  EDIQCAWGIRHLFESE---GAIS-SYTHCELDPSFLMGLSCGIIPFANHNFARRVLYQSE 784

Query: 1914 KHSQQAIGFSTTNPNIRVDTLTHQLYYPQRPLFRTMTSDCLGRQDYT-LGYKNTPPRPEY 1738
            KHSQQAIG+STTNP+IRVDTL+HQLYYPQRPLF+T+ +DCLGR DYT  G K+   RPEY
Sbjct: 785  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTAFGRKDDYTRPEY 844

Query: 1737 FNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHIRSYKAEVDNKEIFETKRLKPK 1558
            FNGQNAIVAVNVHQG+NQEDSLVMN+ASLERGMFRTEH+RSYK +V+NK+   TKRLK K
Sbjct: 845  FNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKTDVENKD--GTKRLKLK 902

Query: 1557 DKIDFAKTESKIGRVDSLDDDGLPYIGANLQSGDIVIGKAAESGADHSIKLKHTERGKVQ 1378
            +KIDF KTESK GRVD+LDDDGLPYIGA+LQ+ DIVIGK +ESG DHSIKLKHTE+G VQ
Sbjct: 903  EKIDFGKTESKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGMVQ 962

Query: 1377 KVVLSANDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLESQENLPFTLQGIVPDV 1198
            KV+LSAND+GKNFAVV+LRQVR+PCLGDKFSSMHGQKGVVGFLESQEN PFT +GIVPD+
Sbjct: 963  KVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHEGIVPDI 1022

Query: 1197 VINPHAFPTRQTPGQLLEAALGKGIACGGSIKHATPFATASIDLIKDQLHRAGYSRWGRE 1018
            VINPHAFPTRQTPGQLLEAALGKGIAC G++++ATPF TAS+D+I +QLH+AGYSRWG E
Sbjct: 1023 VINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHKAGYSRWGAE 1082

Query: 1017 RVYNGQTGEKIEALIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 838
             V NG+TGE++++L+FMGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGVKF
Sbjct: 1083 NVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1142

Query: 837  GEMERDCLLAHGAAANLHERLFMLSDYSQMFVCQKCTRVANVIQRGVSGGKKIRGPYCRF 658
            GEMERDCLLAHG+AANLHERLFMLSD+SQM +CQ C RVANV+ R V GGKKIRGPYC F
Sbjct: 1143 GEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGF 1202

Query: 657  CESADSVVKVNVPYGAKLLYQELFSVGICLKFETEVC 547
            C+S++++V++NVPYGAKLLYQELFS+GICLKF+TEVC
Sbjct: 1203 CKSSENIVRINVPYGAKLLYQELFSMGICLKFDTEVC 1239