BLASTX nr result
ID: Cinnamomum25_contig00003819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00003819
(1275 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010278587.1| PREDICTED: replication factor C subunit 2 [N... 590 e-165
ref|XP_010911387.1| PREDICTED: replication factor C subunit 4 [E... 579 e-162
ref|XP_012086977.1| PREDICTED: replication factor C subunit 2 [J... 578 e-162
ref|XP_008799542.1| PREDICTED: replication factor C subunit 4 [P... 575 e-161
ref|XP_011033786.1| PREDICTED: replication factor C subunit 2 [P... 573 e-161
ref|XP_007200386.1| hypothetical protein PRUPE_ppa008426mg [Prun... 572 e-160
ref|XP_012471846.1| PREDICTED: replication factor C subunit 2 [G... 571 e-160
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V... 571 e-160
ref|XP_002304476.1| replication factor C 40 kDa family protein [... 571 e-160
ref|XP_006857848.1| PREDICTED: replication factor C subunit 2 [A... 571 e-160
ref|XP_009769681.1| PREDICTED: replication factor C subunit 2 [N... 571 e-160
ref|XP_007040141.1| Replication factor C 2 isoform 1 [Theobroma ... 571 e-160
ref|XP_009345441.1| PREDICTED: replication factor C subunit 2 [P... 570 e-160
ref|XP_009112974.1| PREDICTED: replication factor C subunit 2 [B... 570 e-160
ref|XP_008345350.1| PREDICTED: replication factor C subunit 2 [M... 570 e-160
ref|XP_008237493.1| PREDICTED: replication factor C subunit 2 [P... 570 e-159
ref|XP_002509739.1| replication factor C / DNA polymerase III ga... 570 e-159
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr... 570 e-159
ref|XP_010112555.1| Replication factor C subunit 2 [Morus notabi... 569 e-159
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2 is... 569 e-159
>ref|XP_010278587.1| PREDICTED: replication factor C subunit 2 [Nelumbo nucifera]
Length = 336
Score = 590 bits (1520), Expect = e-165
Identities = 297/320 (92%), Positives = 306/320 (95%)
Frame = -2
Query: 1136 YEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 957
YEIPWVEKYRPTKVADVVGN DAVSRLQVIA+DGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 16 YEIPWVEKYRPTKVADVVGNEDAVSRLQVIAKDGNMPNLILSGPPGTGKTTSILALAHEL 75
Query: 956 LGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQA 777
LGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKIIILDEADSMTSGAQQA
Sbjct: 76 LGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 135
Query: 776 LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVPY 597
LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM+VVEAEKVPY
Sbjct: 136 LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVEAEKVPY 195
Query: 596 VPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLEG 417
VPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVRN+LEG
Sbjct: 196 VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 255
Query: 416 KFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGX 237
KF+DACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG
Sbjct: 256 KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGS 315
Query: 236 XXXXXXXXXXXXLVRETAKA 177
LVRETAKA
Sbjct: 316 LLQLSGLLAKLSLVRETAKA 335
>ref|XP_010911387.1| PREDICTED: replication factor C subunit 4 [Elaeis guineensis]
Length = 335
Score = 579 bits (1492), Expect = e-162
Identities = 289/320 (90%), Positives = 304/320 (95%)
Frame = -2
Query: 1136 YEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 957
Y+IPWVEKYRPTKV+DVVGN+DAVSRL++IARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 15 YDIPWVEKYRPTKVSDVVGNSDAVSRLEIIARDGNMPNLILSGPPGTGKTTSILALAHEL 74
Query: 956 LGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQA 777
LG NC+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKIIILDEADSMTSGAQQA
Sbjct: 75 LGPNCREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 134
Query: 776 LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVPY 597
LRRTMEIYSN+TRFALACN SSKIIEPIQSRCALVRFSRLSDQEILGRLM+VVEAEKVPY
Sbjct: 135 LRRTMEIYSNTTRFALACNISSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVEAEKVPY 194
Query: 596 VPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLEG 417
VPEGLEAIIFTADGDMRQALNNLQAT SGFRF+NQENVFKVCDQPHPLHVK+M+RNVLEG
Sbjct: 195 VPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMIRNVLEG 254
Query: 416 KFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGX 237
KF+DAC+GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG
Sbjct: 255 KFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGS 314
Query: 236 XXXXXXXXXXXXLVRETAKA 177
LVRETAKA
Sbjct: 315 LLQLSGLLAKLALVRETAKA 334
>ref|XP_012086977.1| PREDICTED: replication factor C subunit 2 [Jatropha curcas]
gi|643712059|gb|KDP25487.1| hypothetical protein
JCGZ_20643 [Jatropha curcas]
Length = 335
Score = 578 bits (1491), Expect = e-162
Identities = 288/322 (89%), Positives = 303/322 (94%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+GY+IPWVEKYRP K+AD+VGN D VSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 13 SGYDIPWVEKYRPNKIADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 72
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N +EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMTSGAQ
Sbjct: 73 ELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKLVILDEADSMTSGAQ 132
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM+VVEAEKV
Sbjct: 133 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVEAEKV 192
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRF+NQENVFKVCDQPHPLHVK+MVR V+
Sbjct: 193 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQENVFKVCDQPHPLHVKNMVRQVI 252
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGV
Sbjct: 253 EGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 312
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G LVRETAKA
Sbjct: 313 GSYLQLCGLLAKLALVRETAKA 334
>ref|XP_008799542.1| PREDICTED: replication factor C subunit 4 [Phoenix dactylifera]
Length = 332
Score = 575 bits (1481), Expect = e-161
Identities = 287/320 (89%), Positives = 302/320 (94%)
Frame = -2
Query: 1136 YEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 957
Y+IPWVEKYRPTKV+DVVGN+DAVSRL+VIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 12 YDIPWVEKYRPTKVSDVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGKTTSILALAHEL 71
Query: 956 LGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQA 777
LG +C+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG HKI+ILDEADSMTSGAQQA
Sbjct: 72 LGPSCREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGHHKIVILDEADSMTSGAQQA 131
Query: 776 LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVPY 597
LRRTMEIYSN+TRFALACN SSKIIEPIQSRCALVRFSRLSDQEILGRLM+VVEAEKVPY
Sbjct: 132 LRRTMEIYSNTTRFALACNISSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVEAEKVPY 191
Query: 596 VPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLEG 417
VPEGLEAIIFTADGDMRQALNNLQAT GFRF+NQENVFKVCDQPHPLHVK+M+RNVLEG
Sbjct: 192 VPEGLEAIIFTADGDMRQALNNLQATFCGFRFVNQENVFKVCDQPHPLHVKNMIRNVLEG 251
Query: 416 KFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGX 237
KF+DAC+GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG
Sbjct: 252 KFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGS 311
Query: 236 XXXXXXXXXXXXLVRETAKA 177
LVRETAKA
Sbjct: 312 LLQLSGLLAKLALVRETAKA 331
>ref|XP_011033786.1| PREDICTED: replication factor C subunit 2 [Populus euphratica]
gi|743871166|ref|XP_011033787.1| PREDICTED: replication
factor C subunit 2 [Populus euphratica]
Length = 330
Score = 573 bits (1478), Expect = e-161
Identities = 287/322 (89%), Positives = 301/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y+IPWVEKYRP+KVAD+VGN DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 8 SNYDIPWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 67
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKI+ILDEADSMTSGAQ
Sbjct: 68 ELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQ 127
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VV AE+V
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQV 187
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQATHSGF F+NQENVFKVCDQPHPLHVK+MVR VL
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVL 247
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLK LYD+GYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 307
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G LVR+TAKA
Sbjct: 308 GSYLQLCGLLAKLALVRDTAKA 329
>ref|XP_007200386.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
gi|462395786|gb|EMJ01585.1| hypothetical protein
PRUPE_ppa008426mg [Prunus persica]
Length = 332
Score = 572 bits (1474), Expect = e-160
Identities = 287/322 (89%), Positives = 301/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y+IPWVEKYRP+ VAD+VGN DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 10 SAYDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 69
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMTSGAQ
Sbjct: 70 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQ 129
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACN SSKIIEPIQSRCALVRFSRLSDQEILGRLMIVV+AEKV
Sbjct: 130 QALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQAEKV 189
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MV NVL
Sbjct: 190 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVCNVL 249
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLKQLYDLGYSPTDIITT FRIIKNYDMAEYLKLEF+KETGFAHMRICDGV
Sbjct: 250 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 309
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G L+RETAKA
Sbjct: 310 GSYLQLCGLLAKLSLIRETAKA 331
>ref|XP_012471846.1| PREDICTED: replication factor C subunit 2 [Gossypium raimondii]
gi|763753334|gb|KJB20722.1| hypothetical protein
B456_003G161100 [Gossypium raimondii]
Length = 332
Score = 571 bits (1472), Expect = e-160
Identities = 286/321 (89%), Positives = 301/321 (93%)
Frame = -2
Query: 1139 GYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 960
GY++PWVEKYRP+KV+D+VGN DAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 11 GYDVPWVEKYRPSKVSDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 70
Query: 959 LLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQ 780
LLG KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKIIILDEADSMTSGAQQ
Sbjct: 71 LLGPVYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 130
Query: 779 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVP 600
ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM+VV+AE+VP
Sbjct: 131 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEQVP 190
Query: 599 YVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLE 420
YVPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVRNVLE
Sbjct: 191 YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLE 250
Query: 419 GKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG 240
GKF+DAC LKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGVG
Sbjct: 251 GKFDDACFALKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 239 XXXXXXXXXXXXXLVRETAKA 177
VRETAKA
Sbjct: 311 SYLQLCGLLAKFSQVRETAKA 331
>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 571 bits (1472), Expect = e-160
Identities = 284/323 (87%), Positives = 302/323 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y++PWVEKYRPTKVAD+VGN D VSRLQVIARDGNMPNLIL+GPPGTGKTTS+LALAH
Sbjct: 8 SNYDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAH 67
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLGAN +EAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G HKI+ILDEADSMT+GAQ
Sbjct: 68 ELLGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQ 127
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VVEAEKV
Sbjct: 128 QALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKV 187
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
P+VPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVRNVL
Sbjct: 188 PFVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVL 247
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DAC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGV
Sbjct: 248 EGKFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 307
Query: 242 GXXXXXXXXXXXXXLVRETAKAF 174
G +VRETAKAF
Sbjct: 308 GSYLQLCGLLAKLAVVRETAKAF 330
>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
family protein [Populus trichocarpa]
Length = 330
Score = 571 bits (1472), Expect = e-160
Identities = 285/322 (88%), Positives = 300/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y+IPWVEKYRP KVAD+VGN DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 8 SNYDIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 67
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKI+ILDEADSMTSGAQ
Sbjct: 68 ELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQ 127
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VV AE+V
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQV 187
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQATHSGF F+NQENVFKVCDQPHPLHVK+MVR VL
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVL 247
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLK LYD+GYSPTDIITTLFRIIKNYDMAEY+KLEF+KETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGV 307
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G LVR+TA+A
Sbjct: 308 GSYLQLCGLLAKLALVRDTARA 329
>ref|XP_006857848.1| PREDICTED: replication factor C subunit 2 [Amborella trichopoda]
gi|548861950|gb|ERN19315.1| hypothetical protein
AMTR_s00069p00063160 [Amborella trichopoda]
Length = 331
Score = 571 bits (1472), Expect = e-160
Identities = 285/321 (88%), Positives = 301/321 (93%)
Frame = -2
Query: 1139 GYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 960
GYE+PWVEKYRP KVA+VVGN DAVSRLQVIARDGNMPNLIL+GPPGTGKT+SILALAHE
Sbjct: 10 GYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTSSILALAHE 69
Query: 959 LLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQ 780
LLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTL PG+HKII+LDEADSMT+GAQQ
Sbjct: 70 LLGTNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLSPGRHKIIVLDEADSMTTGAQQ 129
Query: 779 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVP 600
ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLMIVV+AEKVP
Sbjct: 130 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVDAEKVP 189
Query: 599 YVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLE 420
YVPEGLEA+IFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVRNV++
Sbjct: 190 YVPEGLEAVIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVID 249
Query: 419 GKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG 240
GKFE+ACSGLKQLYDLGYSPTDIITTLFRIIKNYDM EYLKLEFLKETGFAHMRICDGVG
Sbjct: 250 GKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFAHMRICDGVG 309
Query: 239 XXXXXXXXXXXXXLVRETAKA 177
VRETAKA
Sbjct: 310 SLLQLCGLLAKLSRVRETAKA 330
>ref|XP_009769681.1| PREDICTED: replication factor C subunit 2 [Nicotiana sylvestris]
Length = 332
Score = 571 bits (1471), Expect = e-160
Identities = 287/322 (89%), Positives = 302/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+G EIPWVEK+RPTKV+D+VGN DAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 10 SGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAH 69
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK+IILDEADSMTSGAQ
Sbjct: 70 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILDEADSMTSGAQ 129
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLM VV+AEKV
Sbjct: 130 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVDAEKV 189
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQATHSGF F+NQENVFKVCDQPHPLHVK+MVRNVL
Sbjct: 190 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMVRNVL 249
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DAC+GLK LYDLGYSPTDIITTLFRIIKNYDMAEY+KLEF+KETGFAHMRICDGV
Sbjct: 250 EGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFMKETGFAHMRICDGV 309
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G LVRETAKA
Sbjct: 310 GSYLQMCGLLAKLSLVRETAKA 331
>ref|XP_007040141.1| Replication factor C 2 isoform 1 [Theobroma cacao]
gi|590677884|ref|XP_007040143.1| Replication factor C 2
isoform 1 [Theobroma cacao] gi|508777386|gb|EOY24642.1|
Replication factor C 2 isoform 1 [Theobroma cacao]
gi|508777388|gb|EOY24644.1| Replication factor C 2
isoform 1 [Theobroma cacao]
Length = 332
Score = 571 bits (1471), Expect = e-160
Identities = 286/321 (89%), Positives = 300/321 (93%)
Frame = -2
Query: 1139 GYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 960
GY++PWVEKYRP KV+D+VGN DAVSRLQVIA DGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 11 GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70
Query: 959 LLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQ 780
LLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILDEADSMTSGAQQ
Sbjct: 71 LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130
Query: 779 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVP 600
ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM+VV+AEKVP
Sbjct: 131 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190
Query: 599 YVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLE 420
YVPEGLEAIIFTADGDMRQALNNLQAT SGFRF+NQENVFKVCDQPHPLHVK+MVR VLE
Sbjct: 191 YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250
Query: 419 GKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG 240
G+F+DAC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGVG
Sbjct: 251 GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310
Query: 239 XXXXXXXXXXXXXLVRETAKA 177
LVRETAKA
Sbjct: 311 SYLQLCGLLAKFSLVRETAKA 331
>ref|XP_009345441.1| PREDICTED: replication factor C subunit 2 [Pyrus x bretschneideri]
gi|694436702|ref|XP_009345442.1| PREDICTED: replication
factor C subunit 2 [Pyrus x bretschneideri]
Length = 330
Score = 570 bits (1469), Expect = e-160
Identities = 284/321 (88%), Positives = 302/321 (94%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y++PWVEKYRPTKVAD+VGN DAVSR+QVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 8 SAYDMPWVEKYRPTKVADIVGNEDAVSRIQVIARDGNMPNLILAGPPGTGKTTSILALAH 67
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G+HK++ILDEADSMTSGAQ
Sbjct: 68 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKVVILDEADSMTSGAQ 127
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRL+D+EILGRLMIVV+AEKV
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDEEILGRLMIVVQAEKV 187
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVRN+L
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVRNIL 247
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLKQLYDLGYSPTDIITT FRIIKNYDMAE+LKLEF+KETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGV 307
Query: 242 GXXXXXXXXXXXXXLVRETAK 180
G LVRETAK
Sbjct: 308 GSYLQMCGLLAKLSLVRETAK 328
>ref|XP_009112974.1| PREDICTED: replication factor C subunit 2 [Brassica rapa]
gi|674883237|emb|CDY49195.1| BnaA09g10830D [Brassica
napus]
Length = 334
Score = 570 bits (1469), Expect = e-160
Identities = 284/321 (88%), Positives = 299/321 (93%)
Frame = -2
Query: 1139 GYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 960
GYEIPWVEKYRP+KV D+VGN DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE
Sbjct: 13 GYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 72
Query: 959 LLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQ 780
LLG N +EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMTSGAQQ
Sbjct: 73 LLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 132
Query: 779 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVP 600
ALRRT+EIYSNSTRFALACNTS KIIEPIQSRCALVRFSRLSDQEILGRLM+VV+AE VP
Sbjct: 133 ALRRTIEIYSNSTRFALACNTSGKIIEPIQSRCALVRFSRLSDQEILGRLMVVVQAENVP 192
Query: 599 YVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLE 420
YVPEGLEAIIFTADGDMRQALNNLQAT SGFRF+NQENVFKVCDQPHPLHVK+MVRNVLE
Sbjct: 193 YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLE 252
Query: 419 GKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG 240
KF+DAC G+KQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGVG
Sbjct: 253 SKFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 312
Query: 239 XXXXXXXXXXXXXLVRETAKA 177
+VRETAKA
Sbjct: 313 SYLQLCGLLAKLAVVRETAKA 333
>ref|XP_008345350.1| PREDICTED: replication factor C subunit 2 [Malus domestica]
Length = 330
Score = 570 bits (1469), Expect = e-160
Identities = 284/321 (88%), Positives = 302/321 (94%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y++PWVEKYRPTKVAD+VGN DAVSR+QVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 8 SAYDMPWVEKYRPTKVADIVGNEDAVSRIQVIARDGNMPNLILAGPPGTGKTTSILALAH 67
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G+HK++ILDEADSMTSGAQ
Sbjct: 68 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKVVILDEADSMTSGAQ 127
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRL+D+EILGRLMIVV+AEKV
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDEEILGRLMIVVQAEKV 187
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVRN+L
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVRNIL 247
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLKQLYDLGYSPTDIITT FRIIKNYDMAE+LKLEF+KETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGV 307
Query: 242 GXXXXXXXXXXXXXLVRETAK 180
G LVRETAK
Sbjct: 308 GSYLQMCGLLAKLSLVRETAK 328
>ref|XP_008237493.1| PREDICTED: replication factor C subunit 2 [Prunus mume]
Length = 333
Score = 570 bits (1468), Expect = e-159
Identities = 286/322 (88%), Positives = 300/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y+IPWVEKYRP+ VAD+VGN DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH
Sbjct: 11 SAYDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 70
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMTSGAQ
Sbjct: 71 ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQ 130
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACN SSKIIEPIQSRCALVRFSRLSDQEILGRLMIVV+AEKV
Sbjct: 131 QALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQAEKV 190
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MV NVL
Sbjct: 191 PYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVCNVL 250
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLKQLYDLGYSPTDIITT FRIIKNYDMAEYLKLEF+KETGFAHMRICDGV
Sbjct: 251 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 310
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G L+RE AKA
Sbjct: 311 GSYLQLCGLLAKLSLIREMAKA 332
>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223549638|gb|EEF51126.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 333
Score = 570 bits (1468), Expect = e-159
Identities = 282/320 (88%), Positives = 303/320 (94%)
Frame = -2
Query: 1136 YEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 957
Y++PWVEKYRP+K+ D+VGN DAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 13 YDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 72
Query: 956 LGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQA 777
LG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMTSGAQQA
Sbjct: 73 LGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQA 132
Query: 776 LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVPY 597
LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL+IVV+AEKVPY
Sbjct: 133 LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPY 192
Query: 596 VPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLEG 417
VPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVR+V+EG
Sbjct: 193 VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEG 252
Query: 416 KFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVGX 237
K++DACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGVG
Sbjct: 253 KYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 312
Query: 236 XXXXXXXXXXXXLVRETAKA 177
LVR+TA+A
Sbjct: 313 YLQLCGLLAKLALVRDTARA 332
>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
gi|557088282|gb|ESQ29062.1| hypothetical protein
EUTSA_v10023584mg [Eutrema salsugineum]
Length = 333
Score = 570 bits (1468), Expect = e-159
Identities = 283/321 (88%), Positives = 300/321 (93%)
Frame = -2
Query: 1139 GYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 960
GYEIPWVEKYRP+KV D+VGN DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE
Sbjct: 12 GYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 71
Query: 959 LLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQQ 780
LLG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMTSGAQQ
Sbjct: 72 LLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131
Query: 779 ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKVP 600
ALRRT+EIYSNSTRFALACNTS+KIIEPIQSRCALVRFSRLSDQEILGRLM+VV+AE VP
Sbjct: 132 ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGRLMVVVQAENVP 191
Query: 599 YVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVLE 420
++PEGLEAIIFTADGDMRQALNNLQAT SGFRF+NQENVFKVCDQPHPLHVK+MVRNVLE
Sbjct: 192 FIPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLE 251
Query: 419 GKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGVG 240
KF+DAC G+KQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGVG
Sbjct: 252 SKFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311
Query: 239 XXXXXXXXXXXXXLVRETAKA 177
+VRETAKA
Sbjct: 312 SYLQLCGLLAKLAVVRETAKA 332
>ref|XP_010112555.1| Replication factor C subunit 2 [Morus notabilis]
gi|587947825|gb|EXC34102.1| Replication factor C subunit
2 [Morus notabilis]
Length = 330
Score = 569 bits (1466), Expect = e-159
Identities = 285/322 (88%), Positives = 301/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+GY+IPWVEKYRPT V D+VGN DAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 8 SGYDIPWVEKYRPTNVIDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 67
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N +E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILDEADSMTSGAQ
Sbjct: 68 ELLGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQ 127
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEIL RLM+VV+AEKV
Sbjct: 128 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILVRLMVVVDAEKV 187
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRF+NQENVFKVCDQPHPLHVK+MVR+VL
Sbjct: 188 PYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFLNQENVFKVCDQPHPLHVKNMVRHVL 247
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DACSGLKQLYDLGYSPTDIITT FRIIKNYDMAEYLKL+F+KETGFAHMRICDGV
Sbjct: 248 EGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLQFMKETGFAHMRICDGV 307
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G LVRETAKA
Sbjct: 308 GSYLQLCGLLAKLSLVRETAKA 329
>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis
sativus] gi|700200818|gb|KGN55951.1| hypothetical protein
Csa_3G038730 [Cucumis sativus]
Length = 331
Score = 569 bits (1466), Expect = e-159
Identities = 279/322 (86%), Positives = 302/322 (93%)
Frame = -2
Query: 1142 NGYEIPWVEKYRPTKVADVVGNADAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 963
+ Y+IPWVEKYRP KV D+VGN DAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 9 SNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 68
Query: 962 ELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIIILDEADSMTSGAQ 783
ELLG N KE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK++ILDEADSMT+GAQ
Sbjct: 69 ELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQ 128
Query: 782 QALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVEAEKV 603
QALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLM+V++AEKV
Sbjct: 129 QALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKV 188
Query: 602 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFINQENVFKVCDQPHPLHVKSMVRNVL 423
PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRF+NQ+NVFKVCDQPHPLHVK++VRNVL
Sbjct: 189 PYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVL 248
Query: 422 EGKFEDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKETGFAHMRICDGV 243
EGKF+DAC+GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEF+KETGFAHMRICDGV
Sbjct: 249 EGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGV 308
Query: 242 GXXXXXXXXXXXXXLVRETAKA 177
G +VRETAKA
Sbjct: 309 GSYLQLCGLLAKLSMVRETAKA 330