BLASTX nr result
ID: Cinnamomum25_contig00003616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00003616
(346 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010647738.1| PREDICTED: ubiquitin receptor RAD23c isoform... 72 2e-12
ref|XP_002282352.1| PREDICTED: ubiquitin receptor RAD23c isoform... 72 2e-12
ref|XP_009607597.1| PREDICTED: ubiquitin receptor RAD23d-like is... 69 7e-12
ref|XP_009607598.1| PREDICTED: ubiquitin receptor RAD23c-like is... 69 7e-12
ref|XP_007046249.1| Rad23 UV excision repair protein family isof... 68 9e-12
ref|XP_007046250.1| Rad23 UV excision repair protein family isof... 68 9e-12
ref|XP_002283656.1| PREDICTED: ubiquitin receptor RAD23c [Vitis ... 69 1e-11
ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [S... 65 2e-11
ref|XP_010265160.1| PREDICTED: ubiquitin receptor RAD23c-like [N... 69 2e-11
ref|XP_011021231.1| PREDICTED: ubiquitin receptor RAD23d isoform... 69 2e-11
ref|XP_006383465.1| hypothetical protein POPTR_0005s15740g [Popu... 69 2e-11
ref|XP_011021232.1| PREDICTED: ubiquitin receptor RAD23d isoform... 69 2e-11
ref|XP_006383464.1| ubiquitin family protein [Populus trichocarp... 69 2e-11
ref|XP_011021233.1| PREDICTED: ubiquitin receptor RAD23c isoform... 69 2e-11
ref|XP_011021236.1| PREDICTED: ubiquitin receptor RAD23c isoform... 69 2e-11
ref|XP_011021237.1| PREDICTED: ubiquitin receptor RAD23c isoform... 69 2e-11
gb|KFK37714.1| hypothetical protein AALP_AA3G019400 [Arabis alpina] 68 3e-11
gb|KFK37713.1| hypothetical protein AALP_AA3G019400 [Arabis alpina] 68 3e-11
ref|XP_006408409.1| hypothetical protein EUTSA_v10020817mg [Eutr... 67 5e-11
ref|XP_012462056.1| PREDICTED: ubiquitin receptor RAD23c-like is... 67 5e-11
>ref|XP_010647738.1| PREDICTED: ubiquitin receptor RAD23c isoform X1 [Vitis vinifera]
Length = 398
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
A+NNPERA+EYLYSGIPEQAEVPPVARAP+SGQA N
Sbjct: 197 AYNNPERAVEYLYSGIPEQAEVPPVARAPASGQAAN 232
Score = 26.6 bits (57), Expect(2) = 2e-12
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 120 ERDVYDQAASNLVAG 164
E D Y QAASNLVAG
Sbjct: 153 ETDAYGQAASNLVAG 167
>ref|XP_002282352.1| PREDICTED: ubiquitin receptor RAD23c isoform X2 [Vitis vinifera]
gi|297737829|emb|CBI27030.3| unnamed protein product
[Vitis vinifera]
Length = 397
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
A+NNPERA+EYLYSGIPEQAEVPPVARAP+SGQA N
Sbjct: 196 AYNNPERAVEYLYSGIPEQAEVPPVARAPASGQAAN 231
Score = 26.6 bits (57), Expect(2) = 2e-12
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 120 ERDVYDQAASNLVAG 164
E D Y QAASNLVAG
Sbjct: 152 ETDAYGQAASNLVAG 166
>ref|XP_009607597.1| PREDICTED: ubiquitin receptor RAD23d-like isoform X1 [Nicotiana
tomentosiformis]
Length = 383
Score = 69.3 bits (168), Expect(2) = 7e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERAIEYLYSGIPEQAE+PP A AP+SGQAVN
Sbjct: 185 AFNNPERAIEYLYSGIPEQAEIPPPAPAPASGQAVN 220
Score = 27.3 bits (59), Expect(2) = 7e-12
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 126 DVYDQAASNLVAGGXXXXLHSTTQKEL 206
DVY QAASNLVAG L +T Q+ L
Sbjct: 143 DVYGQAASNLVAGS---TLEATVQQIL 166
>ref|XP_009607598.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Nicotiana
tomentosiformis]
Length = 365
Score = 69.3 bits (168), Expect(2) = 7e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERAIEYLYSGIPEQAE+PP A AP+SGQAVN
Sbjct: 167 AFNNPERAIEYLYSGIPEQAEIPPPAPAPASGQAVN 202
Score = 27.3 bits (59), Expect(2) = 7e-12
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 126 DVYDQAASNLVAGGXXXXLHSTTQKEL 206
DVY QAASNLVAG L +T Q+ L
Sbjct: 125 DVYGQAASNLVAGS---TLEATVQQIL 148
>ref|XP_007046249.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
gi|508710184|gb|EOY02081.1| Rad23 UV excision repair
protein family isoform 1 [Theobroma cacao]
Length = 385
Score = 68.2 bits (165), Expect(2) = 9e-12
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
A+NNPERA+EYLYSGIPEQAEVPPVARAP GQA N
Sbjct: 180 AYNNPERAVEYLYSGIPEQAEVPPVARAPVVGQATN 215
Score = 28.1 bits (61), Expect(2) = 9e-12
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 120 ERDVYDQAASNLVAG 164
E DVY QAASNLVAG
Sbjct: 136 ESDVYGQAASNLVAG 150
>ref|XP_007046250.1| Rad23 UV excision repair protein family isoform 2 [Theobroma cacao]
gi|508710185|gb|EOY02082.1| Rad23 UV excision repair
protein family isoform 2 [Theobroma cacao]
Length = 340
Score = 68.2 bits (165), Expect(2) = 9e-12
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
A+NNPERA+EYLYSGIPEQAEVPPVARAP GQA N
Sbjct: 180 AYNNPERAVEYLYSGIPEQAEVPPVARAPVVGQATN 215
Score = 28.1 bits (61), Expect(2) = 9e-12
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 120 ERDVYDQAASNLVAG 164
E DVY QAASNLVAG
Sbjct: 136 ESDVYGQAASNLVAG 150
>ref|XP_002283656.1| PREDICTED: ubiquitin receptor RAD23c [Vitis vinifera]
gi|296087286|emb|CBI33660.3| unnamed protein product
[Vitis vinifera]
Length = 381
Score = 69.3 bits (168), Expect(2) = 1e-11
Identities = 34/55 (61%), Positives = 37/55 (67%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVNLXXXXXXXXXXXXXXSGPN 346
A+NNPERA+EYLYSGIPEQAE PP AR P+SG AVNL SGPN
Sbjct: 181 AYNNPERAVEYLYSGIPEQAEGPPAARPPASGLAVNLPTQAPQGPQTTVASSGPN 235
Score = 26.6 bits (57), Expect(2) = 1e-11
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 120 ERDVYDQAASNLVAG 164
+ D+Y QAASNLVAG
Sbjct: 137 DSDIYGQAASNLVAG 151
>ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [Solanum tuberosum]
Length = 390
Score = 65.1 bits (157), Expect(2) = 2e-11
Identities = 31/44 (70%), Positives = 36/44 (81%), Gaps = 8/44 (18%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVAR--------APSSGQAVN 289
AFNNPERA++YLYSGIPEQAE+PPVAR AP+SGQA+N
Sbjct: 183 AFNNPERAVDYLYSGIPEQAEIPPVARTPAAPAVTAPASGQAIN 226
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 126 DVYDQAASNLVAGGXXXXLHSTTQKEL 206
DVYDQAASNLVAG L +T Q+ L
Sbjct: 141 DVYDQAASNLVAGS---NLETTVQQIL 164
>ref|XP_010265160.1| PREDICTED: ubiquitin receptor RAD23c-like [Nelumbo nucifera]
Length = 383
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 34/55 (61%), Positives = 38/55 (69%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVNLXXXXXXXXXXXXXXSGPN 346
A+NNPERA+EYLYSGIPEQA+VP VAR P+SGQAVN SGPN
Sbjct: 185 AYNNPERAVEYLYSGIPEQADVPLVARPPASGQAVNPPAQAPQPAQPAVPSSGPN 239
Score = 26.6 bits (57), Expect(2) = 2e-11
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 126 DVYDQAASNLVAG 164
DVY QAASNLVAG
Sbjct: 143 DVYGQAASNLVAG 155
>ref|XP_011021231.1| PREDICTED: ubiquitin receptor RAD23d isoform X1 [Populus
euphratica]
Length = 399
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 200 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 235
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 156 DADMYGQAASNLVAGS---NLEATIQQIL 181
>ref|XP_006383465.1| hypothetical protein POPTR_0005s15740g [Populus trichocarpa]
gi|550339076|gb|ERP61262.1| hypothetical protein
POPTR_0005s15740g [Populus trichocarpa]
Length = 399
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 200 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 235
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 156 DADMYGQAASNLVAGS---NLEATIQQIL 181
>ref|XP_011021232.1| PREDICTED: ubiquitin receptor RAD23d isoform X2 [Populus
euphratica]
Length = 398
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 199 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 234
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 155 DADMYGQAASNLVAGS---NLEATIQQIL 180
>ref|XP_006383464.1| ubiquitin family protein [Populus trichocarpa]
gi|550339075|gb|ERP61261.1| ubiquitin family protein
[Populus trichocarpa]
Length = 384
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 185 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 220
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 141 DADMYGQAASNLVAGS---NLEATIQQIL 166
>ref|XP_011021233.1| PREDICTED: ubiquitin receptor RAD23c isoform X3 [Populus
euphratica]
Length = 382
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 183 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 218
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 139 DADMYGQAASNLVAGS---NLEATIQQIL 164
>ref|XP_011021236.1| PREDICTED: ubiquitin receptor RAD23c isoform X4 [Populus
euphratica]
Length = 381
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 182 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 217
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 138 DADMYGQAASNLVAGS---NLEATIQQIL 163
>ref|XP_011021237.1| PREDICTED: ubiquitin receptor RAD23c isoform X5 [Populus
euphratica]
Length = 364
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
AFNNPERA+EYLYSGIPEQAEVPPVA+ P+SG AVN
Sbjct: 165 AFNNPERAVEYLYSGIPEQAEVPPVAQGPASGVAVN 200
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 120 ERDVYDQAASNLVAGGXXXXLHSTTQKEL 206
+ D+Y QAASNLVAG L +T Q+ L
Sbjct: 121 DADMYGQAASNLVAGS---NLEATIQQIL 146
>gb|KFK37714.1| hypothetical protein AALP_AA3G019400 [Arabis alpina]
Length = 435
Score = 67.8 bits (164), Expect(2) = 3e-11
Identities = 33/38 (86%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSS-GQAVNL 292
AFNNPERA+EYLYSGIPEQAEVPPVARAP+S GQ NL
Sbjct: 230 AFNNPERAVEYLYSGIPEQAEVPPVARAPASGGQPANL 267
Score = 26.6 bits (57), Expect(2) = 3e-11
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 126 DVYDQAASNLVAGGXXXXLHSTTQKEL 206
DVY QAASNL AG L ST Q+ L
Sbjct: 188 DVYGQAASNLAAGS---NLESTIQQIL 211
>gb|KFK37713.1| hypothetical protein AALP_AA3G019400 [Arabis alpina]
Length = 425
Score = 67.8 bits (164), Expect(2) = 3e-11
Identities = 33/38 (86%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSS-GQAVNL 292
AFNNPERA+EYLYSGIPEQAEVPPVARAP+S GQ NL
Sbjct: 220 AFNNPERAVEYLYSGIPEQAEVPPVARAPASGGQPANL 257
Score = 26.6 bits (57), Expect(2) = 3e-11
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 126 DVYDQAASNLVAGGXXXXLHSTTQKEL 206
DVY QAASNL AG L ST Q+ L
Sbjct: 178 DVYGQAASNLAAGS---NLESTIQQIL 201
>ref|XP_006408409.1| hypothetical protein EUTSA_v10020817mg [Eutrema salsugineum]
gi|557109555|gb|ESQ49862.1| hypothetical protein
EUTSA_v10020817mg [Eutrema salsugineum]
Length = 416
Score = 67.0 bits (162), Expect(2) = 5e-11
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSG 277
AFNNPERA+EYLYSGIPEQAEVPPVARAP+SG
Sbjct: 211 AFNNPERAVEYLYSGIPEQAEVPPVARAPASG 242
Score = 26.6 bits (57), Expect(2) = 5e-11
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 126 DVYDQAASNLVAGGXXXXLHSTTQKEL 206
DVY QAASNL AG L ST Q+ L
Sbjct: 169 DVYGQAASNLAAGS---NLESTIQQIL 192
>ref|XP_012462056.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X1 [Gossypium
raimondii]
Length = 386
Score = 66.6 bits (161), Expect(2) = 5e-11
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +2
Query: 182 AFNNPERAIEYLYSGIPEQAEVPPVARAPSSGQAVN 289
A+NNPERA+EYLYSGIPEQAE PPVARAP GQA N
Sbjct: 182 AYNNPERAVEYLYSGIPEQAEAPPVARAPVVGQATN 217
Score = 26.9 bits (58), Expect(2) = 5e-11
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 120 ERDVYDQAASNLVAG 164
+ DVY QAASNLVAG
Sbjct: 138 DSDVYGQAASNLVAG 152