BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00002703
         (2539 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II tra...   907   0.0  
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   894   0.0  
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   870   0.0  
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   869   0.0  
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              869   0.0  
ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II tra...   867   0.0  
ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II tra...   867   0.0  
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   864   0.0  
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   863   0.0  
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   863   0.0  
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra...   857   0.0  
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   852   0.0  
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   850   0.0  
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   847   0.0  
ref|XP_010923559.1| PREDICTED: mediator of RNA polymerase II tra...   846   0.0  
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...   841   0.0  
ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II tra...   838   0.0  
ref|XP_008791235.1| PREDICTED: mediator of RNA polymerase II tra...   838   0.0  
ref|XP_010923554.1| PREDICTED: mediator of RNA polymerase II tra...   837   0.0  
ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II tra...   836   0.0  

>ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Nelumbo nucifera]
          Length = 809

 Score =  907 bits (2344), Expect = 0.0
 Identities = 481/697 (69%), Positives = 555/697 (79%), Gaps = 14/697 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVA+EGTAA+GPFWN+++++YL+KIIRC CG E +GQKL G++FEL+LVVFNAH
Sbjct: 1    MAEKQLIVAIEGTAAMGPFWNTVVSDYLEKIIRCFCGKELSGQKLPGANFELSLVVFNAH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G  SACLVQRSGWT++MD FLQWL+AIPFTGGGF E AI EG++EALMMF +  NG+QTQ
Sbjct: 61   GSCSACLVQRSGWTKNMDTFLQWLSAIPFTGGGFCEAAIGEGLSEALMMFCVAPNGSQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD QKHCILVAASNPY LPTPV RP  Q +E+++S E Q+ES LSDAETVAKSF+QC 
Sbjct: 121  QNVDGQKHCILVAASNPYPLPTPVYRPPNQNLEKNESMEGQTESCLSDAETVAKSFAQCF 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+ISPKQLPKLK IY+AGKRNPRA DP+VD  KNPQFL+L+SENFMEARAAL+RPGI
Sbjct: 181  VSLSVISPKQLPKLKAIYNAGKRNPRAADPSVDNLKNPQFLILLSENFMEARAALSRPGI 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            T+L +NQ P+K+DT  VPP+SG +  SIPSVNG +M RQ IP GNIPTATVKVEP+TV+S
Sbjct: 241  TSLTSNQGPVKMDTTSVPPVSGPS-ASIPSVNGPLMTRQQIPVGNIPTATVKVEPTTVSS 299

Query: 1574 MVPGPSFSHL--TSHGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP FS++   SHGA                QEMI + D+VQEFKP+VN + QPLRP 
Sbjct: 300  MVTGPGFSNIPPVSHGATQAVPSLQTSSPIASSQEMIANADNVQEFKPIVNPVSQPLRPP 359

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMGG--MTMH---MISSGMSSSAL 1236
            G AAANV+ILNNLSQ +   +             LQT+G   M MH   MISSGM+SS L
Sbjct: 360  G-AAANVNILNNLSQVRGSSI------------GLQTVGATPMAMHMSNMISSGMASSVL 406

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            PAAQ+V SSGQS ITS+ G G      QV QNT +GS TSA S +SGNSNLG+S PL N+
Sbjct: 407  PAAQTVFSSGQSSITSLTGSGSLMGTAQVTQNTAIGSLTSAASNISGNSNLGISQPLANI 466

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QGAVSM Q V  +GQGNL SG Q+GQSG+G+NQNIM  LGPSG+ SGAGTMIPTPGMSQ 
Sbjct: 467  QGAVSMGQPVPTVGQGNL-SGTQIGQSGIGMNQNIMTGLGPSGISSGAGTMIPTPGMSQQ 525

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPMQ-SQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
            VQ G  SLG NNGSAA++   Q  +G +Q SQS+YV++WEGALSGQRQGQPVFI RLEGY
Sbjct: 526  VQGGTQSLGVNNGSAANV---QQTAGTLQPSQSRYVKLWEGALSGQRQGQPVFITRLEGY 582

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            RN +ASETLA+DWP TMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQ+KKLC
Sbjct: 583  RNVTASETLASDWPPTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQDKKLC 642

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQI 426
            AVI         SVSD+A RLIGMLFPGDMVVFKPQI
Sbjct: 643  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 679


>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Vitis vinifera]
          Length = 827

 Score =  894 bits (2310), Expect = 0.0
 Identities = 471/699 (67%), Positives = 556/699 (79%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQL+VAVEGTAA+GP+W +++++YLDKIIR  CG+E  GQK S S+FEL+LV+FNAH
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y +CLVQRSGWTRD+D+FLQWL+A+PF GGGF++ AIAEG+AEALMMFS+ +NG+QTQ
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAA+NPY LPTPV +P +Q MEQ++S E Q+ESRLSDAE VAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKLK+IY+AGKRNPR  DP VD  KNP FLVLIS++FMEARAAL+RPG+
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            +N+ ANQSP+K+D A VP +S + P SIPSVNG +MNR  I  G +PTATVKVEPSTV S
Sbjct: 241  SNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVTS 299

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            +  GP F H+ S    A                QEMI++GD+VQ+ KP+V+G+ Q LRP 
Sbjct: 300  ITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPV 359

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMGG--MTMH---MISSGMSSSAL 1236
             PAAANVSILNNLS  QARQV+            LQ+MGG  M MH   MISSGM+SS +
Sbjct: 360  VPAAANVSILNNLS--QARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASS-V 416

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            PA Q+V SSGQS ++SI G G      QV QN+ LGSFTSATS MS NSNLG+S PL NL
Sbjct: 417  PATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNL 476

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QG VSM Q+V GM QGNL  G Q+ QSG+G+NQN+M+ LGPSG+ SG GTMIPTPGMSQ 
Sbjct: 477  QGGVSMGQTVPGMSQGNL-PGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQ 535

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPMQ-SQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
            VQ G+PSLG NN +AA+M LPQ  SG MQ +QSKYV+VWEG LSGQRQGQPVFI RLEGY
Sbjct: 536  VQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGY 595

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASE+LAA+WP+TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 596  RSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 655

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQI++
Sbjct: 656  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQITN 694


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  870 bits (2247), Expect = 0.0
 Identities = 464/699 (66%), Positives = 539/699 (77%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            M+EKQLIVAVEGTAA+GP+W S++++YL+KIIRC C +E  GQK S S+ EL+LV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FL WL+ IPF GGGF++ AIAEG++EALMMFS+  NG+Q Q
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNP+ LPTPV RP +Q ++Q+++ E Q+ESRLSDAETVAKSF QC 
Sbjct: 121  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKL  IY+A KRNPRA DP VD +KNP FLVLISENFMEARAAL+RPG+
Sbjct: 181  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             NLA NQ+P+K+D APV  ++G APTSIPSVNG  +NR PI  GN+PTATVKVEPSTV S
Sbjct: 241  ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298

Query: 1574 MVPGPSFSHL--TSHGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP+F H+   S  A                QEMITSGDSV E KP+V+GM QPLRP 
Sbjct: 299  MVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 358

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLS  QARQV+            LQ+MG   M MH   MISSGM+SS +
Sbjct: 359  APAAANVNILNNLS--QARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASS-V 415

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P +Q V SS QSGITSI G G      QVPQN+GL SFTSA S +SGNSN  +S P+G L
Sbjct: 416  PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 475

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QG  SM QSV GM QGN  SG Q+ Q+G+ +NQN+M+ LGPSG+ SG GTMIPTPGMSQ 
Sbjct: 476  QGGASMGQSV-GMSQGN-HSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQ 533

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPM-QSQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
             Q G+  L  NN +A +M L Q  S  +  SQSKYV+VWEG+LSGQRQGQPVFI +LEGY
Sbjct: 534  AQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGY 593

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 594  RSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 653

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 654  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 692


>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 834

 Score =  869 bits (2246), Expect = 0.0
 Identities = 464/699 (66%), Positives = 539/699 (77%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            M+EKQLIVAVEGTAA+GP+W S++++YL+KIIRC C +E  GQK S S+ EL+LV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FL WL+ IPF GGGF++ AIAEG++EALMMFS+  NG+Q Q
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNP+ LPTPV RP +Q ++Q+++ E Q+ESRLSDAETVAKSF QC 
Sbjct: 121  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKL  IY+A KRNPRA DP VD +KNP FLVLISENFMEARAAL+RPG+
Sbjct: 181  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             NLA NQ+P+K+D APV  ++G APTSIPSVNG  +NR PI  GN+PTATVKVEPSTV S
Sbjct: 241  ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP+F H+ S    A                QEMITSGDSV E KP+V+GM QPLRP 
Sbjct: 299  MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 358

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLS  QARQV+            LQ+MG   M MH   MISSGM+SS +
Sbjct: 359  APAAANVNILNNLS--QARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASS-V 415

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P +Q V SS QSGITSI G G      QVPQN+GL SFTSA S +SGNSN  +S P+G L
Sbjct: 416  PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 475

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QG  SM QSV GM QGN  SG Q+ Q+G+ +NQN+M+ LGPSG+ SG GTMIPTPGMSQ 
Sbjct: 476  QGGASMGQSV-GMSQGN-HSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQ 533

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPM-QSQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
             Q G+  L  NN +A +M L Q  S  +  SQSKYV+VWEG+LSGQRQGQPVFI +LEGY
Sbjct: 534  AQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGY 593

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 594  RSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 653

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 654  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 692


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  869 bits (2246), Expect = 0.0
 Identities = 462/699 (66%), Positives = 547/699 (78%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQL+VAVEGTAA+GP+W +++++YLDKIIR  CG+E  GQK S S+FEL+LV+FNAH
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y +CLVQRSGWTRD+D+FLQWL+A+PF GGGF++ AIAEG+AEALMMFS+ +NG+QTQ
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAA+NPY LPTPV +P +Q MEQ++S E Q+ESRLSDAE VAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKLK+IY+AGKRNPR  DP VD  KNP FLVLIS++FMEARAAL+RPG+
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            +N+ ANQSP+K+D A VP +S + P SIPSVNG +MNR  I  G +PTATVKVEPSTV S
Sbjct: 241  SNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVTS 299

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            +  GP F H+ S    A                QEMI++GD+VQ+ KP+V+G+ Q LRP 
Sbjct: 300  ITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPV 359

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMGG--MTMH---MISSGMSSSAL 1236
             PAAANVSILNNLS  QARQV+            LQ+MGG  M MH   MISSGM+SS +
Sbjct: 360  VPAAANVSILNNLS--QARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASS-V 416

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            PA Q+V SSGQS ++SI G G      QV QN+ LGSFTSATS MS NSNLG+S PL   
Sbjct: 417  PATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPL--- 473

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
                     + GM QGNL  G Q+ QSG+G+NQN+M+ LGPSG+ SG GTMIPTPGMSQ 
Sbjct: 474  ---------IPGMSQGNL-PGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQ 523

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPMQ-SQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
            VQ G+PSLG NN +AA+M LPQ  SG MQ +QSKYV+VWEG LSGQRQGQPVFI RLEGY
Sbjct: 524  VQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGY 583

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASE+LAA+WP+TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 584  RSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 643

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQI++
Sbjct: 644  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQITN 682


>ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Jatropha curcas]
          Length = 720

 Score =  867 bits (2241), Expect = 0.0
 Identities = 458/698 (65%), Positives = 538/698 (77%), Gaps = 13/698 (1%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            M EKQLIVAVEG+AA+GPFW S+L++YL+KIIR   GS+ TGQK + S+ EL+LV F AH
Sbjct: 1    MTEKQLIVAVEGSAAMGPFWQSILSDYLEKIIRSFVGSDLTGQKPATSTVELSLVTFYAH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G YSACLVQRSGWTRD+D+FLQWL+ IPF GGGF++ AIAEG++EALMMF    N +Q Q
Sbjct: 61   GSYSACLVQRSGWTRDIDIFLQWLSCIPFAGGGFNDAAIAEGLSEALMMFPFAPNASQAQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             + D Q+HC+LVAASNP+SLPTPV RP +Q +EQS++ ++Q+ESRLSDAETVAKSF QC 
Sbjct: 121  QNTDAQRHCVLVAASNPHSLPTPVYRPQIQNLEQSENIDLQTESRLSDAETVAKSFPQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KL+ IY+AGKRN R  DP VD  KNP FLVLISENFMEAR ALTRPG+
Sbjct: 181  VSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFLVLISENFMEARTALTRPGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            +NL+ANQSP+K+D + VP ++G  P SI SVNGS+MNR PI  GN+PTATVK+EP+TV S
Sbjct: 241  SNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPISVGNVPTATVKIEPTTVTS 300

Query: 1574 MVPGPSFSHLTS-HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPAG 1398
            M PGP FSH+ S   A                QEM+T+G++V E KP V+GMPQ +RP  
Sbjct: 301  MAPGPVFSHIPSARPATQAVPSLQTSSPPTTSQEMMTNGENVPELKPTVSGMPQSVRPVP 360

Query: 1397 PAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSALP 1233
            P AANVSILNNLS  QARQV+            L +M    + MH   MISSGM++S +P
Sbjct: 361  PGAANVSILNNLS--QARQVMNSAALTGGSSIALPSMNQTPVAMHMSNMISSGMATS-VP 417

Query: 1232 AAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNLQ 1071
            AAQ+V SSGQ GITS+ G G      Q+  N+GLGSF S+TS +SGNSNLG+S P+ NLQ
Sbjct: 418  AAQTVFSSGQPGITSMTGSGTLTGTSQIAPNSGLGSFASSTSNISGNSNLGISQPMANLQ 477

Query: 1070 GAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQPV 891
            G VSM QSVSGM QGNL SG Q+ QS +G+NQN+MN LGPSG+ SG  TMIPTPGM Q  
Sbjct: 478  GGVSMGQSVSGMSQGNL-SGGQMVQSVIGMNQNVMNGLGPSGVSSGTSTMIPTPGMPQQA 536

Query: 890  QVGLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEGYR 714
            Q G+ SLG NN SAA+M L Q  +  +QS QSKYV+VWEG LSGQRQGQPVFI RLEGYR
Sbjct: 537  QTGMQSLGVNNNSAANMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYR 596

Query: 713  NASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLCA 534
            NASASE+LAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA++QHGFLGQLQEKKLCA
Sbjct: 597  NASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCA 656

Query: 533  VIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            VI         SVSD+A RLIGMLFPGDMVVFKPQI S
Sbjct: 657  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPS 694


>ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Jatropha curcas]
          Length = 842

 Score =  867 bits (2241), Expect = 0.0
 Identities = 458/698 (65%), Positives = 538/698 (77%), Gaps = 13/698 (1%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            M EKQLIVAVEG+AA+GPFW S+L++YL+KIIR   GS+ TGQK + S+ EL+LV F AH
Sbjct: 1    MTEKQLIVAVEGSAAMGPFWQSILSDYLEKIIRSFVGSDLTGQKPATSTVELSLVTFYAH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G YSACLVQRSGWTRD+D+FLQWL+ IPF GGGF++ AIAEG++EALMMF    N +Q Q
Sbjct: 61   GSYSACLVQRSGWTRDIDIFLQWLSCIPFAGGGFNDAAIAEGLSEALMMFPFAPNASQAQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             + D Q+HC+LVAASNP+SLPTPV RP +Q +EQS++ ++Q+ESRLSDAETVAKSF QC 
Sbjct: 121  QNTDAQRHCVLVAASNPHSLPTPVYRPQIQNLEQSENIDLQTESRLSDAETVAKSFPQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KL+ IY+AGKRN R  DP VD  KNP FLVLISENFMEAR ALTRPG+
Sbjct: 181  VSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFLVLISENFMEARTALTRPGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            +NL+ANQSP+K+D + VP ++G  P SI SVNGS+MNR PI  GN+PTATVK+EP+TV S
Sbjct: 241  SNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPISVGNVPTATVKIEPTTVTS 300

Query: 1574 MVPGPSFSHLTS-HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPAG 1398
            M PGP FSH+ S   A                QEM+T+G++V E KP V+GMPQ +RP  
Sbjct: 301  MAPGPVFSHIPSARPATQAVPSLQTSSPPTTSQEMMTNGENVPELKPTVSGMPQSVRPVP 360

Query: 1397 PAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSALP 1233
            P AANVSILNNLS  QARQV+            L +M    + MH   MISSGM++S +P
Sbjct: 361  PGAANVSILNNLS--QARQVMNSAALTGGSSIALPSMNQTPVAMHMSNMISSGMATS-VP 417

Query: 1232 AAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNLQ 1071
            AAQ+V SSGQ GITS+ G G      Q+  N+GLGSF S+TS +SGNSNLG+S P+ NLQ
Sbjct: 418  AAQTVFSSGQPGITSMTGSGTLTGTSQIAPNSGLGSFASSTSNISGNSNLGISQPMANLQ 477

Query: 1070 GAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQPV 891
            G VSM QSVSGM QGNL SG Q+ QS +G+NQN+MN LGPSG+ SG  TMIPTPGM Q  
Sbjct: 478  GGVSMGQSVSGMSQGNL-SGGQMVQSVIGMNQNVMNGLGPSGVSSGTSTMIPTPGMPQQA 536

Query: 890  QVGLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEGYR 714
            Q G+ SLG NN SAA+M L Q  +  +QS QSKYV+VWEG LSGQRQGQPVFI RLEGYR
Sbjct: 537  QTGMQSLGVNNNSAANMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYR 596

Query: 713  NASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLCA 534
            NASASE+LAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA++QHGFLGQLQEKKLCA
Sbjct: 597  NASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCA 656

Query: 533  VIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            VI         SVSD+A RLIGMLFPGDMVVFKPQI S
Sbjct: 657  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPS 694


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  864 bits (2232), Expect = 0.0
 Identities = 460/696 (66%), Positives = 537/696 (77%), Gaps = 11/696 (1%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAE+QLIVAVEGTAA+GP+W +++++YLDKIIRC   SE TGQK S S+ ELALV FN H
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FLQWL+AIPF+GGGF++ AIAEG++EALMMF I  NGNQTQ
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNPY LPTPV RP +Q +EQ+++ E Q+ESRLSDAETVAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KLKTIYSAGKRNPRA DP VD  +NP FLVLISENFME RAAL+RPG+
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             +LA+NQSP+K+D A V   +G  PTS+PSVNGSMM+RQP+  GN+PTAT+KVEP+T+ S
Sbjct: 241  PSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTATIKVEPTTITS 300

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  GP+F H+ +                     QE++ SGD+VQE KP V+GM QPLRP 
Sbjct: 301  MGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQPLRPV 360

Query: 1400 GPAAANVSILNNLSQAQA-RQVIXXXXXXXXXXXXLQTMGGMTM-HMISSGMSSSALPAA 1227
             P AANV+ILNNLSQA+                   QT   M M +MISSGM+SS +P A
Sbjct: 361  -PPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASS-VPPA 418

Query: 1226 QSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNLQGA 1065
            Q+V SSGQS +TS+ G G      QVP N+GL SF SATS ++ NSN+GMS P+GN+Q  
Sbjct: 419  QTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQSG 478

Query: 1064 VSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQPVQV 885
            VSM QSV GM QGN  SGAQ+ QSGVG++QN M+ LGPS + SG GTM P PGMSQ VQ 
Sbjct: 479  VSMGQSVPGMSQGN-HSGAQMVQSGVGMSQN-MSGLGPSTVSSGTGTMFPIPGMSQQVQS 536

Query: 884  GLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEGYRNA 708
            G+ +LG +N SAASM L Q  S  +QS QSKYV+VWEG LSGQRQGQPVFI RLEGYR+A
Sbjct: 537  GMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 596

Query: 707  SASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLCAVI 528
            SASETLAA WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLCAVI
Sbjct: 597  SASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 656

Query: 527  XXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
                     SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 657  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 692


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  863 bits (2230), Expect = 0.0
 Identities = 463/699 (66%), Positives = 538/699 (76%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            M+EKQLIVAVEGTAA+GP+W S++++YL+KIIRC C +E  GQ  S S+ EL+LV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTH 59

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FL WL+ IPF GGGF++ AIAEG++EALMMFS+  NG+Q Q
Sbjct: 60   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 119

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNP+ LPTPV RP +Q ++Q+++ E Q+ESRLSDAETVAKSF QC 
Sbjct: 120  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 179

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKL  IY+A KRNPRA DP VD +KNP FLVLISENFMEARAAL+RPG+
Sbjct: 180  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 239

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             NLA NQ+P+K+D APV  ++G APTSIPSVNG  +NR PI  GN+PTATVKVEPSTV S
Sbjct: 240  ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 297

Query: 1574 MVPGPSFSHL--TSHGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP+F H+   S  A                QEMITSGDSV E KP+V+GM QPLRP 
Sbjct: 298  MVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 357

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLS  QARQV+            LQ+MG   M MH   MISSGM+SS +
Sbjct: 358  APAAANVNILNNLS--QARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASS-V 414

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P +Q V SS QSGITSI G G      QVPQN+GL SFTSA S +SGNSN  +S P+G L
Sbjct: 415  PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 474

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QG  SM QSV GM QGN  SG Q+ Q+G+ +NQN+M+ LGPSG+ SG GTMIPTPGMSQ 
Sbjct: 475  QGGASMGQSV-GMSQGN-HSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQ 532

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPM-QSQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
             Q G+  L  NN +A +M L Q  S  +  SQSKYV+VWEG+LSGQRQGQPVFI +LEGY
Sbjct: 533  AQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGY 592

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 593  RSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 652

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 653  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 691


>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 833

 Score =  863 bits (2229), Expect = 0.0
 Identities = 463/699 (66%), Positives = 538/699 (76%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            M+EKQLIVAVEGTAA+GP+W S++++YL+KIIRC C +E  GQ  S S+ EL+LV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTH 59

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FL WL+ IPF GGGF++ AIAEG++EALMMFS+  NG+Q Q
Sbjct: 60   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 119

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNP+ LPTPV RP +Q ++Q+++ E Q+ESRLSDAETVAKSF QC 
Sbjct: 120  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 179

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKL  IY+A KRNPRA DP VD +KNP FLVLISENFMEARAAL+RPG+
Sbjct: 180  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 239

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             NLA NQ+P+K+D APV  ++G APTSIPSVNG  +NR PI  GN+PTATVKVEPSTV S
Sbjct: 240  ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 297

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP+F H+ S    A                QEMITSGDSV E KP+V+GM QPLRP 
Sbjct: 298  MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 357

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLS  QARQV+            LQ+MG   M MH   MISSGM+SS +
Sbjct: 358  APAAANVNILNNLS--QARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASS-V 414

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P +Q V SS QSGITSI G G      QVPQN+GL SFTSA S +SGNSN  +S P+G L
Sbjct: 415  PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 474

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QG  SM QSV GM QGN  SG Q+ Q+G+ +NQN+M+ LGPSG+ SG GTMIPTPGMSQ 
Sbjct: 475  QGGASMGQSV-GMSQGN-HSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQ 532

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPM-QSQSKYVRVWEGALSGQRQGQPVFICRLEGY 717
             Q G+  L  NN +A +M L Q  S  +  SQSKYV+VWEG+LSGQRQGQPVFI +LEGY
Sbjct: 533  AQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGY 592

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 593  RSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 652

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 653  AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 691


>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Gossypium raimondii]
            gi|763763083|gb|KJB30337.1| hypothetical protein
            B456_005G138200 [Gossypium raimondii]
          Length = 834

 Score =  857 bits (2213), Expect = 0.0
 Identities = 459/700 (65%), Positives = 540/700 (77%), Gaps = 15/700 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVAVEGTAA+GP+W  +L++YL+KIIRC C +E  GQK + S+ EL+LV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FLQWL+AIPF+GGGF++ AIAEG++EALMMF I +NGNQT 
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAANGNQTH 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
               D Q+HCILVAASNPY LPTPV RP  Q +EQS++ E Q+ESRLSDAETVAKSF QC 
Sbjct: 121  QIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KLK IYSAGKRNPRA+DP VD  +NPQFLVLISENFME  AAL+R G+
Sbjct: 181  VSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAALSRSGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             +LA NQSP+K+D A V  ++G+ PTS+PSVNGS+M+RQP+ AGN+PTATVKVEP+T+ S
Sbjct: 241  PSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTATVKVEPTTITS 300

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  GP+F H+ S                     +E++ S D+VQE KP V GM QPLRP 
Sbjct: 301  MANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPSVGGMTQPLRPV 360

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLSQA   +V+            LQ+MG   + MH   MISSGM+SS +
Sbjct: 361  PPAAANVNILNNLSQA---RVMNSAALSGGTSIGLQSMGQTPVAMHMSNMISSGMTSS-V 416

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P AQ+V SSGQSG+TS+ G G      QVP N+ L SF SATS ++GNSN+G+S P+ N+
Sbjct: 417  PLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGISQPMCNV 476

Query: 1073 QGAVSMAQSVSG-MGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQ 897
            QGAVSM QSV G M QGN  SGAQL Q+GV ++Q+ M+ LGPS + SG GT+IP PGMSQ
Sbjct: 477  QGAVSMGQSVPGSMSQGN-HSGAQLVQTGVAMSQS-MSGLGPSTVSSGTGTLIPAPGMSQ 534

Query: 896  PVQVGLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEG 720
             VQ G+ +LG NN SAASM L Q  S  +QS QSKYV+VWEG LSGQRQGQPVFI RLEG
Sbjct: 535  QVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEG 594

Query: 719  YRNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKL 540
            YR+ASASETLA+DWP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKL
Sbjct: 595  YRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 654

Query: 539  CAVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            CAVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 655  CAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQISS 694


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
            arboreum]
          Length = 828

 Score =  852 bits (2201), Expect = 0.0
 Identities = 455/700 (65%), Positives = 539/700 (77%), Gaps = 15/700 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVAVEGTAA+GP+W  +L++YL+KIIRC C +E  GQK + S+ EL+LV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVAFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FLQWL+AIPF+GGGF++ AIAEG++EALMMF I +NGNQT 
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAANGNQTH 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
               D Q+HCILVAASNPY LPTPV RP  Q +EQS++ E Q+ESRLSDAETVAKSF QC 
Sbjct: 121  QIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KLK IYSAGKRNPRA+DP VD  +NPQFLVLISENFME  AAL+R G+
Sbjct: 181  VSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAALSRSGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             +LA NQSP+K+D A V  ++G++PTS+PSVNGS+M+RQP+  GN+PTATVKVEP+T+ S
Sbjct: 241  PSLAPNQSPVKMDMASVTSVAGTSPTSVPSVNGSIMSRQPVSVGNVPTATVKVEPATITS 300

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  GP+F H+ S                     +E++ S D+VQE KP V GM QPLRP 
Sbjct: 301  MANGPAFPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSDNVQEIKPSVGGMTQPLRPV 360

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLSQA   +V+            LQ+MG   + MH   MISSGM+SS +
Sbjct: 361  PPAAANVNILNNLSQA---RVMNSAALSGGTSIGLQSMGQTPVAMHMSNMISSGMTSS-V 416

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P AQ+V SSGQS +TS+ G G      QVP N+ L SF SATS ++GNSN+G+S P+ N+
Sbjct: 417  PLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGISQPMCNV 476

Query: 1073 QGAVSMAQSVSG-MGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQ 897
            QGAVSM QSV G M  GN  SGAQL Q+GV ++Q+ M+ LGPS + SG GT+IPTPG+SQ
Sbjct: 477  QGAVSMGQSVPGSMSHGN-HSGAQLVQTGVAMSQS-MSGLGPSTVSSGTGTLIPTPGLSQ 534

Query: 896  PVQVGLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEG 720
             VQ G+ ++G NN SAASM L Q  S  +QS QSKYV+VWEG LSGQRQGQPVFI RLEG
Sbjct: 535  QVQSGMQTIGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEG 594

Query: 719  YRNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKL 540
            YR+ASASETLA+DWP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKL
Sbjct: 595  YRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 654

Query: 539  CAVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            CAVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 655  CAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQISS 694


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  850 bits (2196), Expect = 0.0
 Identities = 459/706 (65%), Positives = 540/706 (76%), Gaps = 21/706 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVAVEGTAA+GP+W  +L++YL+KIIRC C +E  GQK + S+ EL+LV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALM------MFSITS 2133
            G Y ACLVQRSGWT+D+D+FLQWL+AIPF+GGGF++ AIAEG++EALM      MF I +
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMSFDVAQMFPIAA 120

Query: 2132 NGNQTQPSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAK 1953
            NGNQT    D Q+HCILVAASNPY LPTPV RP  Q +EQS++ E Q+ESRLSDAETVAK
Sbjct: 121  NGNQTHQIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAK 180

Query: 1952 SFSQCCVSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAA 1773
            SF QC VSLS+I PKQL KLK IYSAGKRNPRA+DP VD  +NPQFLVLISENFME  AA
Sbjct: 181  SFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAA 240

Query: 1772 LTRPGITNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVE 1593
            L+R G+ +LA NQSP+K+D A V  ++G+ PTS+PSVNGS+M+RQP+ AGN+PTATVKVE
Sbjct: 241  LSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTATVKVE 300

Query: 1592 PSTVASMVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMP 1419
            P+T+ SM  GP+F H+ S                     +E++ S D+VQE KP V GM 
Sbjct: 301  PTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPSVGGMT 360

Query: 1418 QPLRPAGPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSG 1254
            QPLRP  PAAANV+ILNNLSQA   +V+            LQ+MG   + MH   MISSG
Sbjct: 361  QPLRPVPPAAANVNILNNLSQA---RVMNSAALSGGTSIGLQSMGQTPVAMHMSNMISSG 417

Query: 1253 MSSSALPAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMS 1092
            M+SS +P AQ+V SSGQSG+TS+ G G      QVP N+ L SF SATS ++GNSN+G+S
Sbjct: 418  MTSS-VPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGIS 476

Query: 1091 PPLGNLQGAVSMAQSVSG-MGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIP 915
             P+ N+QGAVSM QSV G M QGN  SGAQL Q+GV ++Q+ M+ LGPS + SG GT+IP
Sbjct: 477  QPMCNVQGAVSMGQSVPGSMSQGN-HSGAQLVQTGVAMSQS-MSGLGPSTVSSGTGTLIP 534

Query: 914  TPGMSQPVQVGLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVF 738
             PGMSQ VQ G+ +LG NN SAASM L Q  S  +QS QSKYV+VWEG LSGQRQGQPVF
Sbjct: 535  APGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVF 594

Query: 737  ICRLEGYRNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQ 558
            I RLEGYR+ASASETLA+DWP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQ
Sbjct: 595  ITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQ 654

Query: 557  LQEKKLCAVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            LQEKKLCAVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 655  LQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQISS 700


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  847 bits (2188), Expect = 0.0
 Identities = 455/696 (65%), Positives = 531/696 (76%), Gaps = 11/696 (1%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAE+QLIVAVEGTAA+GP+W +++++YLDKIIRC   SE TGQK S S+ ELALV FN H
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FLQWL+AIPF+GGGF++ AIAEG++EALMMF I  NGNQTQ
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNPY LPTPV RP +Q +EQ+++ E Q+ESRLSDAETVAKSF+QC 
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KLKTIYSAGKRNPRA DP VD  +NP FLVLISENFME RAAL+RPG+
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             +LA+NQSP+K+D A           S+ SVNGSMM+RQP+  GN+PTAT+KVEP+T+ S
Sbjct: 241  PSLASNQSPVKMDMA-----------SVTSVNGSMMSRQPVSVGNVPTATIKVEPTTITS 289

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  GP+F H+ +                     QE++ SGD+VQE KP V+GM QPLRP 
Sbjct: 290  MGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQPLRPV 349

Query: 1400 GPAAANVSILNNLSQAQA-RQVIXXXXXXXXXXXXLQTMGGMTM-HMISSGMSSSALPAA 1227
             P AANV+ILNNLSQA+                   QT   M M +MISSGM+SS +P A
Sbjct: 350  -PPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASS-VPPA 407

Query: 1226 QSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNLQGA 1065
            Q+V SSGQS +TS+ G G      QVP N+GL SF SATS ++ NSN+GMS P+GN+Q  
Sbjct: 408  QTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQSG 467

Query: 1064 VSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQPVQV 885
            VSM QSV GM QGN  SGAQ+ QSGVG++QN M+ LGPS + SG GTM P PGMSQ VQ 
Sbjct: 468  VSMGQSVPGMSQGN-HSGAQMVQSGVGMSQN-MSGLGPSTVSSGTGTMFPIPGMSQQVQS 525

Query: 884  GLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEGYRNA 708
            G+ +LG +N SAASM L Q  S  +QS QSKYV+VWEG LSGQRQGQPVFI RLEGYR+A
Sbjct: 526  GMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 585

Query: 707  SASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLCAVI 528
            SASETLAA WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLCAVI
Sbjct: 586  SASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 645

Query: 527  XXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
                     SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 646  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 681


>ref|XP_010923559.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Elaeis guineensis]
          Length = 816

 Score =  846 bits (2185), Expect = 0.0
 Identities = 448/692 (64%), Positives = 529/692 (76%), Gaps = 7/692 (1%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVAVEGTAALGP+W ++L++YLDKIIRC  G+E TGQKLSG+  E ALVVFN H
Sbjct: 1    MAEKQLIVAVEGTAALGPYWQTILSDYLDKIIRCFYGNELTGQKLSGAHPEFALVVFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            GP+S+ +V  SGWT+D+DVF QWL+ IPF+GGGFSE AIAEG+AEALMMF  T N +Q+ 
Sbjct: 61   GPHSSFIVHHSGWTKDLDVFFQWLSGIPFSGGGFSEAAIAEGLAEALMMFPFTPNVSQSH 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +++ QKHCILVAASNPY LPTPV RP++  +E  ++AE Q+E+ L+DAETVAKSF QCC
Sbjct: 121  QNLEAQKHCILVAASNPYPLPTPVYRPAMS-LEHPENAEAQTEAGLADAETVAKSFGQCC 179

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+ISPKQLPKL++IY+AGKRNPRA DPAVD  KNPQFLVL+SENFMEARAAL+RP +
Sbjct: 180  VSLSVISPKQLPKLRSIYNAGKRNPRAVDPAVDHVKNPQFLVLLSENFMEARAALSRPLL 239

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             +L++NQ  +KLD A   PI G + T+ P+VNGSM+NR P+  GN+PTATVK+EP+TV S
Sbjct: 240  GSLSSNQGVVKLDGASAAPIPGPS-TNNPTVNGSMINRPPVTVGNVPTATVKMEPTTVPS 298

Query: 1574 MVPGPSFSHLTSHG--AXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP+F H+ S    A                QEM  + D VQE KP+VN + Q LRP 
Sbjct: 299  MVSGPAFPHMPSISTVATQGVANLQNSAPSPTSQEMGANNDGVQEIKPLVNPISQSLRPV 358

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMGG--MTMHM---ISSGMSSSAL 1236
            GP  ANVSILNNLSQ   RQ++            LQTMG   M MHM   ISSGM+SSA+
Sbjct: 359  GPTPANVSILNNLSQH--RQMMTSASIAGASSIGLQTMGATPMAMHMSNMISSGMASSAM 416

Query: 1235 PAAQSVLSSGQSGITSIVGPGQVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNLQGAVSM 1056
                SV  SG      ++   QV QN+ LGSF SATS MSGNSN+G+SP L NLQG + M
Sbjct: 417  SGITSVAGSGP-----LMATAQVAQNSALGSFASATSNMSGNSNIGISPALANLQGNIGM 471

Query: 1055 AQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQPVQVGLP 876
              SV G+GQG+L S AQ+GQ G+G+NQNIMN+LGP+ + SG GTMIPTPGMSQ  Q GL 
Sbjct: 472  GTSVPGVGQGSLASSAQIGQGGIGMNQNIMNNLGPTSISSGPGTMIPTPGMSQ--QAGLH 529

Query: 875  SLGANNGSAASMTLPQHASGPMQSQSKYVRVWEGALSGQRQGQPVFICRLEGYRNASASE 696
            SLG +N S  SM + QHAS   Q+ SKYV++WEGALSGQRQGQPVFIC+LEGYR+ASASE
Sbjct: 530  SLGVSNNSTMSMPVSQHASNVQQAPSKYVKIWEGALSGQRQGQPVFICKLEGYRSASASE 589

Query: 695  TLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLCAVIXXXX 516
            TLAADWP TMQIVRLI+Q+HMNNKQYVGKADFLVFR LNQHGFLGQLQEKKLCAVI    
Sbjct: 590  TLAADWPLTMQIVRLIAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPS 649

Query: 515  XXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
                 SVSD+A RLIGMLFPGDMVVFKPQ+SS
Sbjct: 650  QTLLLSVSDKAGRLIGMLFPGDMVVFKPQVSS 681


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
            gi|550332870|gb|EEE88812.2| hypothetical protein
            POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score =  841 bits (2172), Expect = 0.0
 Identities = 452/704 (64%), Positives = 540/704 (76%), Gaps = 19/704 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MA+KQLIVAVEGTAA+GPFW+ ++++YL+KIIRC CG+E +GQK   SS EL+LV FN+H
Sbjct: 1    MADKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G YSACLVQRSGWTRD+D+FL WL+AIPF GGGF++ AIAEG++EALMMF IT NGNQTQ
Sbjct: 61   GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
            P+ D Q++CIL+AASNP+ LPTPV RP +Q +EQ+++ + Q+ESRLSDAETVAKSF QC 
Sbjct: 121  PNTDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKL+ IY+AGKRN RA DP VD  KNP FLVLISENFMEARAAL+RPG 
Sbjct: 181  VSLSVICPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGA 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            T+L +NQ+P+K+D A V  ++G  P SIPSVNGS+ NR PI  GN+PTATVKVEPST+ S
Sbjct: 241  TSLPSNQTPVKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITS 300

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  G +F H+TS    +                Q+M T+G++ Q+ KP V+   Q  R A
Sbjct: 301  MANGSAFPHITSVPRPSSQGVPSMQTSSPSTTTQDMATNGENAQDLKPNVSVTTQSARSA 360

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLS  QARQV+            L ++    + MH   MISSGM+SS +
Sbjct: 361  PPAAANVNILNNLS--QARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMTSS-V 417

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNL-GMSPPLGN 1077
            PAAQ+V SSGQ G++SI G G      Q+  N+GLGSFTSATS M GNSNL G+S P+GN
Sbjct: 418  PAAQTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMGN 477

Query: 1076 LQGAVSMAQS-VSGMGQGNLT---SGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTP 909
            L   VS++QS +SG+G    T   SGAQ+ QSG+G N N M+ LG SG+ SG+ TMIPTP
Sbjct: 478  LHAGVSISQSAMSGLGTNPNTMSGSGAQMVQSGMGANPNTMSGLGASGVSSGSNTMIPTP 537

Query: 908  GMSQPVQVGLPSLGANNGSAASMTLPQHASGPMQ-SQSKYVRVWEGALSGQRQGQPVFIC 732
            GMSQ VQ G+  LGANN SAA++ L Q  +G +Q +QSKYV+VWEG LSGQRQGQPVFI 
Sbjct: 538  GMSQQVQSGMQPLGANNNSAANLPLSQQTAGGLQPAQSKYVKVWEGNLSGQRQGQPVFIT 597

Query: 731  RLEGYRNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQ 552
            RLEGYR+ASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQ
Sbjct: 598  RLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ 657

Query: 551  EKKLCAVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            EKKLCAVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 658  EKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 701


>ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Gossypium raimondii]
            gi|763813221|gb|KJB80073.1| hypothetical protein
            B456_013G080300 [Gossypium raimondii]
          Length = 822

 Score =  838 bits (2165), Expect = 0.0
 Identities = 452/699 (64%), Positives = 537/699 (76%), Gaps = 14/699 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVAVEGTAA+GP+W+ ++++YLDKIIRC C SE TGQK S S+ E +LV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWHIVVSDYLDKIIRCFCSSELTGQKNSTSNVEFSLVTFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G Y ACLVQRSGWT+D+D+FLQWL+AIPF+GGGF++ AIAEG++EALMMF I SNGNQT 
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIASNGNQTP 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +VD Q+HCILVAASNPY LPTPV RP +Q +EQ +++E Q+ES LSDAETVA+SF+QC 
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQL KLK IYSAGKRNPRA DP VD  KN QFLVLISENFME RAAL+R G+
Sbjct: 181  VSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGV 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
             +LA NQSP+K+D A V  + G +P+   SVNGSM+ + P+  GN+ TATVKVEP+T+ S
Sbjct: 241  PSLATNQSPVKMDMASVTSVMGPSPS---SVNGSMVGKLPVSVGNVATATVKVEPTTITS 297

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  GP+FSH+ S                     QE +TSGD++QE KP V+GM QP RP 
Sbjct: 298  MATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKPSVSGMTQPSRPV 357

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLSQA   +V+            LQ+MG   + MH   MISSGM+SS +
Sbjct: 358  PPAAANVNILNNLSQA---RVMSSAALTGGTSIGLQSMGQTPVAMHMSNMISSGMASS-V 413

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNL 1074
            P A +VLSSGQ  +TS+ G G      QVP N+GL +F+SA+S ++GNSN+G+S P GN+
Sbjct: 414  PPAHTVLSSGQPTMTSLTGSGALTGTAQVPPNSGLSTFSSASSNVAGNSNIGISQPTGNV 473

Query: 1073 QGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQP 894
            QGAV++ QSV GM QGN  SG Q+ QSGVG++QN M++LG S + SG GTMIPTPGMSQ 
Sbjct: 474  QGAVNIGQSVPGMSQGN-HSGTQMMQSGVGMSQN-MSALGQSTVSSGNGTMIPTPGMSQQ 531

Query: 893  VQVGLPSLGANNGSAASMTLPQHASGPMQS-QSKYVRVWEGALSGQRQGQPVFICRLEGY 717
            VQ G+ +LG +N SAASM L Q  S  +QS QSKYV+VWEG LSGQRQGQPVFI RLEGY
Sbjct: 532  VQSGMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGY 591

Query: 716  RNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLC 537
            R+ASASETLAA WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQEKKLC
Sbjct: 592  RSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 651

Query: 536  AVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            AVI         SVSD+A RLIGMLFPGDMVVFKPQ+SS
Sbjct: 652  AVIQLPQQTLLLSVSDKACRLIGMLFPGDMVVFKPQMSS 690


>ref|XP_008791235.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Phoenix dactylifera]
          Length = 809

 Score =  838 bits (2164), Expect = 0.0
 Identities = 439/693 (63%), Positives = 522/693 (75%), Gaps = 8/693 (1%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MAEKQLIVAVEGTAALGP+W+ +L++YLDKIIRC  G+E TGQKLSG+  E ALVVFN H
Sbjct: 1    MAEKQLIVAVEGTAALGPYWSIILSDYLDKIIRCFYGNELTGQKLSGAHPEFALVVFNTH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            GP+S+ +VQ SGWT+D+DVF QWL+ IPF+GGGFSE AIAEG+AEALMMF  T N +Q+ 
Sbjct: 61   GPHSSFIVQHSGWTKDLDVFFQWLSGIPFSGGGFSEAAIAEGLAEALMMFPFTPNVSQSH 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
             +++ QKHCILVAASNPY LPTPV RP++Q +E  ++AE Q+E+ L+DAETVAKSF QCC
Sbjct: 121  QNLEAQKHCILVAASNPYPLPTPVYRPAIQSLEHPENAEAQTEAGLADAETVAKSFGQCC 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+ISPK LPKL++IY+AGKRNPRA DPAVD  KNPQFLVL+SE+FMEARAAL+RP I
Sbjct: 181  VSLSVISPKHLPKLRSIYNAGKRNPRAADPAVDHVKNPQFLVLLSESFMEARAALSRPLI 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
              L +NQ  +KLD A   PI G + T+ P+VNGSM+NR P+  GNIPTATVK+EP+TV+S
Sbjct: 241  GGLTSNQGVVKLDGASATPIPGPS-TNNPAVNGSMINRPPVTVGNIPTATVKMEPTTVSS 299

Query: 1574 MVPGPSFSHL--TSHGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            MV GP+F H+   S+ A                QEM  + D VQE KP++N + Q LRP 
Sbjct: 300  MVSGPAFPHMQSISNVATQGVGNLQNSAPSPTSQEMGANSDGVQEIKPLINPISQSLRPV 359

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMGGMTMHMISSGMSSSALPAAQS 1221
            GP  ANVSILNNLS  Q RQ++            LQTMG   M M  S M S+ +     
Sbjct: 360  GPTPANVSILNNLS--QHRQMMTSASIAGASSIGLQTMGATPMAMHMSNMISTGM----- 412

Query: 1220 VLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNLGMSPPLGNLQGAVS 1059
             +SS  SGITS+ G G      QV QN+ LGSF SATS MSGNSN+G+SP L NLQG + 
Sbjct: 413  -VSSAMSGITSVAGSGPLMATAQVAQNSALGSFASATSNMSGNSNIGISPALANLQGNIG 471

Query: 1058 MAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTPGMSQPVQVGL 879
            M  SV G+GQGNL S  Q+GQ G+ +NQN MN+LGP+G+ SG GTMIPTPGMSQ  Q GL
Sbjct: 472  MGTSVPGVGQGNLASSTQIGQGGISMNQNTMNNLGPTGISSGPGTMIPTPGMSQ--QAGL 529

Query: 878  PSLGANNGSAASMTLPQHASGPMQSQSKYVRVWEGALSGQRQGQPVFICRLEGYRNASAS 699
             SLG  N S  +M + QH S   Q+QSKYV++WEG+LSGQRQGQPVFIC+LEGYRNASAS
Sbjct: 530  HSLGVTNNSTMNMPVSQHPSNVQQAQSKYVKIWEGSLSGQRQGQPVFICKLEGYRNASAS 589

Query: 698  ETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQEKKLCAVIXXX 519
            ETLAADWP TMQIVRLI+Q+HM+NKQY GK D+LVFR LNQHGFLGQLQEKKLCAVI   
Sbjct: 590  ETLAADWPQTMQIVRLIAQEHMSNKQYGGKVDYLVFRTLNQHGFLGQLQEKKLCAVIQLP 649

Query: 518  XXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
                  SVSD+A RLIG+LFPGDMVVFKPQ+ S
Sbjct: 650  SQTLLLSVSDKAGRLIGVLFPGDMVVFKPQVPS 682


>ref|XP_010923554.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Elaeis guineensis]
          Length = 827

 Score =  837 bits (2163), Expect = 0.0
 Identities = 448/703 (63%), Positives = 529/703 (75%), Gaps = 18/703 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQ-----------KLSGSS 2328
            MAEKQLIVAVEGTAALGP+W ++L++YLDKIIRC  G+E TGQ           KLSG+ 
Sbjct: 1    MAEKQLIVAVEGTAALGPYWQTILSDYLDKIIRCFYGNELTGQVDILLPRLVFKKLSGAH 60

Query: 2327 FELALVVFNAHGPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMM 2148
             E ALVVFN HGP+S+ +V  SGWT+D+DVF QWL+ IPF+GGGFSE AIAEG+AEALMM
Sbjct: 61   PEFALVVFNTHGPHSSFIVHHSGWTKDLDVFFQWLSGIPFSGGGFSEAAIAEGLAEALMM 120

Query: 2147 FSITSNGNQTQPSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDA 1968
            F  T N +Q+  +++ QKHCILVAASNPY LPTPV RP++  +E  ++AE Q+E+ L+DA
Sbjct: 121  FPFTPNVSQSHQNLEAQKHCILVAASNPYPLPTPVYRPAMS-LEHPENAEAQTEAGLADA 179

Query: 1967 ETVAKSFSQCCVSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFM 1788
            ETVAKSF QCCVSLS+ISPKQLPKL++IY+AGKRNPRA DPAVD  KNPQFLVL+SENFM
Sbjct: 180  ETVAKSFGQCCVSLSVISPKQLPKLRSIYNAGKRNPRAVDPAVDHVKNPQFLVLLSENFM 239

Query: 1787 EARAALTRPGITNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTA 1608
            EARAAL+RP + +L++NQ  +KLD A   PI G + T+ P+VNGSM+NR P+  GN+PTA
Sbjct: 240  EARAALSRPLLGSLSSNQGVVKLDGASAAPIPGPS-TNNPTVNGSMINRPPVTVGNVPTA 298

Query: 1607 TVKVEPSTVASMVPGPSFSHLTSHG--AXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPM 1434
            TVK+EP+TV SMV GP+F H+ S    A                QEM  + D VQE KP+
Sbjct: 299  TVKMEPTTVPSMVSGPAFPHMPSISTVATQGVANLQNSAPSPTSQEMGANNDGVQEIKPL 358

Query: 1433 VNGMPQPLRPAGPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMGG--MTMHM-- 1266
            VN + Q LRP GP  ANVSILNNLSQ   RQ++            LQTMG   M MHM  
Sbjct: 359  VNPISQSLRPVGPTPANVSILNNLSQH--RQMMTSASIAGASSIGLQTMGATPMAMHMSN 416

Query: 1265 -ISSGMSSSALPAAQSVLSSGQSGITSIVGPGQVPQNTGLGSFTSATSTMSGNSNLGMSP 1089
             ISSGM+SSA+    SV  SG      ++   QV QN+ LGSF SATS MSGNSN+G+SP
Sbjct: 417  MISSGMASSAMSGITSVAGSGP-----LMATAQVAQNSALGSFASATSNMSGNSNIGISP 471

Query: 1088 PLGNLQGAVSMAQSVSGMGQGNLTSGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTP 909
             L NLQG + M  SV G+GQG+L S AQ+GQ G+G+NQNIMN+LGP+ + SG GTMIPTP
Sbjct: 472  ALANLQGNIGMGTSVPGVGQGSLASSAQIGQGGIGMNQNIMNNLGPTSISSGPGTMIPTP 531

Query: 908  GMSQPVQVGLPSLGANNGSAASMTLPQHASGPMQSQSKYVRVWEGALSGQRQGQPVFICR 729
            GMSQ  Q GL SLG +N S  SM + QHAS   Q+ SKYV++WEGALSGQRQGQPVFIC+
Sbjct: 532  GMSQ--QAGLHSLGVSNNSTMSMPVSQHASNVQQAPSKYVKIWEGALSGQRQGQPVFICK 589

Query: 728  LEGYRNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQE 549
            LEGYR+ASASETLAADWP TMQIVRLI+Q+HMNNKQYVGKADFLVFR LNQHGFLGQLQE
Sbjct: 590  LEGYRSASASETLAADWPLTMQIVRLIAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQE 649

Query: 548  KKLCAVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            KKLCAVI         SVSD+A RLIGMLFPGDMVVFKPQ+SS
Sbjct: 650  KKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVSS 692


>ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Populus euphratica]
          Length = 857

 Score =  836 bits (2160), Expect = 0.0
 Identities = 449/704 (63%), Positives = 539/704 (76%), Gaps = 19/704 (2%)
 Frame = -3

Query: 2474 MAEKQLIVAVEGTAALGPFWNSLLTEYLDKIIRCLCGSEGTGQKLSGSSFELALVVFNAH 2295
            MA+KQLIVAVEGTAA+GPFW+ ++++YL+KIIRC CG+E +GQK   SS ELALV FN+H
Sbjct: 1    MADKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELALVTFNSH 60

Query: 2294 GPYSACLVQRSGWTRDMDVFLQWLAAIPFTGGGFSEVAIAEGIAEALMMFSITSNGNQTQ 2115
            G YSACLVQRSGWTRD+D+FL WL+AIPF GGGF++ AIAEG++EALMMF I  NGNQTQ
Sbjct: 61   GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 2114 PSVDWQKHCILVAASNPYSLPTPVSRPSVQKMEQSDSAEVQSESRLSDAETVAKSFSQCC 1935
            P++D Q++CIL+AASNP+ LPTPV RP +Q +EQ+++ + Q+ESRLSDAETVAKSF QC 
Sbjct: 121  PNIDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS 180

Query: 1934 VSLSIISPKQLPKLKTIYSAGKRNPRATDPAVDIAKNPQFLVLISENFMEARAALTRPGI 1755
            VSLS+I PKQLPKLK+IY+AGKRN RA DP VD  KNP FLVLISENFMEARAAL+RPG 
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGA 240

Query: 1754 TNLAANQSPLKLDTAPVPPISGSAPTSIPSVNGSMMNRQPIPAGNIPTATVKVEPSTVAS 1575
            T+L +NQ+P K+D A V  ++G  P SIPSVNGS+ NR PI  GN+PTATVKVEPST+ S
Sbjct: 241  TSLPSNQTPAKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITS 300

Query: 1574 MVPGPSFSHLTS--HGAXXXXXXXXXXXXXXXXQEMITSGDSVQEFKPMVNGMPQPLRPA 1401
            M  G +F H+ S    +                Q+M T+G++ Q+ KP V+   Q  R A
Sbjct: 301  MANGSAFPHIPSVPRPSSQVVPSMQTSSPSTTTQDMATNGENAQDLKPNVSVTTQSARSA 360

Query: 1400 GPAAANVSILNNLSQAQARQVIXXXXXXXXXXXXLQTMG--GMTMH---MISSGMSSSAL 1236
             PAAANV+ILNNLS  QARQV+            L ++    + MH   MISSGM+SS +
Sbjct: 361  PPAAANVNILNNLS--QARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMASS-V 417

Query: 1235 PAAQSVLSSGQSGITSIVGPG------QVPQNTGLGSFTSATSTMSGNSNL-GMSPPLGN 1077
            PAAQ+V SSGQ G++SI G G      Q+  N+GLGSFTSATS M GNSNL G+S P+GN
Sbjct: 418  PAAQTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMGN 477

Query: 1076 LQGAVSMAQS-VSGMGQGNLT---SGAQLGQSGVGINQNIMNSLGPSGMPSGAGTMIPTP 909
            L   VS++QS +SG+G    T   SGAQ+ QSG+G N N M+ LG SG+ SG+ TMIPTP
Sbjct: 478  LHAGVSISQSAMSGLGANPNTISGSGAQMVQSGMGANPNTMSGLGASGVSSGSNTMIPTP 537

Query: 908  GMSQPVQVGLPSLGANNGSAASMTLPQHASGPMQ-SQSKYVRVWEGALSGQRQGQPVFIC 732
            GMS  VQ G+  LGANN SAA++ L Q  +G +Q +Q+KY++VWEG+LSGQRQGQPVFI 
Sbjct: 538  GMSPQVQSGMQPLGANNNSAANLPLSQQTAGGLQPTQTKYLKVWEGSLSGQRQGQPVFIT 597

Query: 731  RLEGYRNASASETLAADWPSTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQLQ 552
            RLEGYR+ASASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRA+NQHGFLGQLQ
Sbjct: 598  RLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAVNQHGFLGQLQ 657

Query: 551  EKKLCAVIXXXXXXXXXSVSDRASRLIGMLFPGDMVVFKPQISS 420
            EKKLCAVI         SVSD+A RLIGMLFPGDMVVFKPQISS
Sbjct: 658  EKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISS 701