BLASTX nr result

ID: Cinnamomum25_contig00002148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00002148
         (454 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777647.1| PREDICTED: RING-H2 finger protein ATL22-like...    61   3e-07

>ref|XP_008777647.1| PREDICTED: RING-H2 finger protein ATL22-like, partial [Phoenix
           dactylifera]
          Length = 282

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 46/130 (35%), Positives = 65/130 (50%)
 Frame = -1

Query: 418 LFNCSKNVYFPTYRDDASHIPCLSDAEHDAFVVSDDFSLSLLPVSCQTIKTISVPRLYPF 239
           LFN S+ VY   YR D   I CLS++++  F V    SL  +P SC  IKTI V R Y F
Sbjct: 140 LFN-SRYVYVD-YRYD--EIDCLSESDNHIFAVPSSSSLVEIPKSCTPIKTIQVIRPYIF 195

Query: 238 NLNWSLTTPPSSEDHTSFMSYWLRYYYSFDQDLHDLMWYVPGCIGCERSEGMECRYKDDN 59
            L          +D++S          ++D+ +  LMW  P C  CE   G+ CR  + N
Sbjct: 196 YL----------DDYSS----------AYDEYVPTLMWERPDCARCETGRGI-CRPNNSN 234

Query: 58  SNDTLCCRKP 29
           S++ +C  +P
Sbjct: 235 SHEIMCLYQP 244


Top