BLASTX nr result

ID: Cinnamomum25_contig00002054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00002054
         (1321 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008225693.1| PREDICTED: double-stranded RNA-binding prote...    69   1e-08
ref|XP_012476405.1| PREDICTED: double-stranded RNA-binding prote...    68   1e-08
ref|XP_010031996.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...    68   2e-08
ref|XP_010920417.1| PREDICTED: double-stranded RNA-binding prote...    67   2e-08
ref|XP_007016748.1| Double-stranded RNA-binding protein 2 [Theob...    67   3e-08
ref|XP_009383958.1| PREDICTED: double-stranded RNA-binding prote...    66   7e-08
ref|XP_008791540.1| PREDICTED: double-stranded RNA-binding prote...    65   1e-07
ref|XP_009367071.1| PREDICTED: double-stranded RNA-binding prote...    63   4e-07
ref|XP_008359745.1| PREDICTED: double-stranded RNA-binding prote...    63   4e-07
ref|XP_008385320.1| PREDICTED: double-stranded RNA-binding prote...    62   8e-07
ref|XP_007132261.1| hypothetical protein PHAVU_011G079700g [Phas...    62   8e-07
ref|XP_004487104.1| PREDICTED: double-stranded RNA-binding prote...    60   3e-06
gb|AFK41322.1| unknown [Lotus japonicus]                               60   3e-06
ref|XP_007206726.1| hypothetical protein PRUPE_ppa024708mg, part...    60   5e-06
gb|KHG19747.1| Double-stranded RNA-binding protein 2 [Gossypium ...    59   8e-06
gb|KHG19746.1| Double-stranded RNA-binding protein 2 [Gossypium ...    59   8e-06

>ref|XP_008225693.1| PREDICTED: double-stranded RNA-binding protein 2 [Prunus mume]
          Length = 411

 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 61/202 (30%), Positives = 81/202 (40%), Gaps = 22/202 (10%)
 Frame = -2

Query: 1062 SSPSSSILPATTTAAKVTNGRSLFSPSLLPDNLVSILKQLDDQGSCLR--KFPAAGAAPY 889
            S+ +S ILP      +    RS    +   DN +   +    +   LR  +FPAAGAAPY
Sbjct: 218  SAHTSKILPLI---CQKQAPRSRLQSNATNDNRIPSSQPSPLESRVLRPNRFPAAGAAPY 274

Query: 888  VPVRNFRAPCHGMAPPVTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 709
            VP+R  R PCHG+APPVTIR                                        
Sbjct: 275  VPIRQLRTPCHGIAPPVTIR-----TAVPVFSAPPLPPPPVMPCQAMRVPPLRVAPPVTM 329

Query: 708  VDGPPIFMGPL----NNPSIRTEGPPVI----------PCPP------PLNKPSVPTEDT 589
                P+F  P     + P+ R E PP+I            PP      P N      E+T
Sbjct: 330  RQAVPVFSAPPIRKDDPPTTRKEDPPIIVKEDLPVIRKADPPAVIASSPQNDLIAQVEET 389

Query: 588  GEATTIDLQESTAGQNIKQLKI 523
            G A++  LQES   Q+++QLKI
Sbjct: 390  GSASSNSLQESKTVQSLEQLKI 411


>ref|XP_012476405.1| PREDICTED: double-stranded RNA-binding protein 2-like [Gossypium
            raimondii] gi|763758857|gb|KJB26188.1| hypothetical
            protein B456_004G229300 [Gossypium raimondii]
          Length = 421

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 62/214 (28%), Positives = 83/214 (38%), Gaps = 36/214 (16%)
 Frame = -2

Query: 1056 PSSSILPATTT------AAKVTNGRSLFSPSLLPDNLVSILKQLDDQGSCLRKFPAAGAA 895
            P+S   PATT+        KV       S +     ++  L+  + +G  ++KFP AGAA
Sbjct: 214  PTSPQPPATTSKILPFICRKVVPRNRSMSATASDKPILLSLQAPESRGPRMQKFPVAGAA 273

Query: 894  PYVPVRNFRAPCHGMAPPVTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 715
            PYVP++ FR PCHG+APPVTIR                                      
Sbjct: 274  PYVPIQQFRTPCHGIAPPVTIR----TAVPVFSAPPRPAPSAVSPQPPASAVPTQQGQSG 329

Query: 714  XXVDGPPIFMGPLNNPSIRTEGPPVIPCPPPL-----------------NKPSVPTEDTG 586
                 P     PL  PS  T  P ++  PPP+                 + P V  EDT 
Sbjct: 330  LSSQPPQCAASPLQPPS--TVPPQLLRIPPPVTIRQAIPVFASPPVRKQDTPPVINEDTT 387

Query: 585  EAT-------------TIDLQESTAGQNIKQLKI 523
             AT             T DLQES   ++++QLKI
Sbjct: 388  TATKSHAQVEEDANTKTKDLQESETVRSLEQLKI 421


>ref|XP_010031996.1| PREDICTED: LOW QUALITY PROTEIN: double-stranded RNA-binding protein
            2-like [Eucalyptus grandis]
          Length = 397

 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 60/191 (31%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
 Frame = -2

Query: 1059 SPSSSILPATTTAA----KVTNGRSLFSPSLLPDNLVSILKQ--LDDQGSCLRKFPAAGA 898
            S S  + P TT+      + T  R   SP+   D  + + +    + +G+  +KFPAAGA
Sbjct: 214  STSPQLPPVTTSKILPLFQKTTSRVRPSPTSTNDKPLPVPRSPSAESRGAHPQKFPAAGA 273

Query: 897  APYVPVRNFRAPCHGMAPPVTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 718
            APYVP+  FRAPC G+APPVTIR                                     
Sbjct: 274  APYVPILQFRAPCRGIAPPVTIR----TVSPVYAAPLHPQPSVRLQPPLMQASPVGVAPP 329

Query: 717  XXXVDGPPIFMGPLNNPSIRTEGPPVIPCPPPLNKP-----SVPTEDTGE-ATTIDLQES 556
                   P+F  P   P+ +   P V   PP LN P     S+P  D  + AT    QES
Sbjct: 330  VCTRQAVPVFAAP---PARKDIPPTVYKEPPLLNSPVSSDVSLPVMDERKSATAKQQQES 386

Query: 555  TAGQNIKQLKI 523
               Q +K+LKI
Sbjct: 387  EVVQKLKELKI 397


>ref|XP_010920417.1| PREDICTED: double-stranded RNA-binding protein 6-like [Elaeis
           guineensis]
          Length = 455

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = -2

Query: 990 SPSLLPDNLVSILKQLDDQGSCLRKFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
           SP++      S   Q ++  S  +KFPAAGAAPYVPVR++R PCHGMAPPVTIR
Sbjct: 242 SPAMTDGGPPSPFTQPENHSSRPQKFPAAGAAPYVPVRHYRMPCHGMAPPVTIR 295


>ref|XP_007016748.1| Double-stranded RNA-binding protein 2 [Theobroma cacao]
            gi|508787111|gb|EOY34367.1| Double-stranded RNA-binding
            protein 2 [Theobroma cacao]
          Length = 434

 Score = 67.0 bits (162), Expect = 3e-08
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 11/87 (12%)
 Frame = -2

Query: 1056 PSSSILPATTTAAK-------VTNGRSLFSPS----LLPDNLVSILKQLDDQGSCLRKFP 910
            P+S   PATT+          V   RS+ + +    +LP +  SI    + +G+  +KFP
Sbjct: 214  PTSPQPPATTSKILPLICPKVVPRNRSMSATANDKHILPQSQASIP---ESRGTRPQKFP 270

Query: 909  AAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            AAGAAPYVP+R FR PCHG+APPVTIR
Sbjct: 271  AAGAAPYVPIRQFRTPCHGIAPPVTIR 297


>ref|XP_009383958.1| PREDICTED: double-stranded RNA-binding protein 6-like [Musa
           acuminata subsp. malaccensis]
          Length = 477

 Score = 65.9 bits (159), Expect = 7e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -2

Query: 990 SPSLLPDNLVSILKQLDDQGSCLRKFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
           SP +     VS  +Q ++Q    +KFPAAGAAPY PVR+F  PCHGMAPPVT+R
Sbjct: 242 SPRINNSTHVSSYQQAENQTVRPQKFPAAGAAPYFPVRHFNGPCHGMAPPVTVR 295


>ref|XP_008791540.1| PREDICTED: double-stranded RNA-binding protein 6-like [Phoenix
           dactylifera]
          Length = 439

 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -2

Query: 990 SPSLLPDNLVSILKQLDDQGSCLRKFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
           SP+       S   Q +++ +  +KFPAAGAAPYVPVR++R PCHGMAPPVTIR
Sbjct: 242 SPATTDGGPPSPFLQPENRSTRPQKFPAAGAAPYVPVRHYRMPCHGMAPPVTIR 295


>ref|XP_009367071.1| PREDICTED: double-stranded RNA-binding protein 2 [Pyrus x
            bretschneideri]
          Length = 410

 Score = 63.2 bits (152), Expect = 4e-07
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = -2

Query: 1002 RSLFSPSLLPDNLV--SILKQLDDQGSCLRKFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            RS F  +   DN V  S    +D +    ++FPAAGAAPYVP+R  R PCHG+APPVTIR
Sbjct: 237  RSRFQSNATHDNRVTSSQASSIDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIR 296


>ref|XP_008359745.1| PREDICTED: double-stranded RNA-binding protein 2-like [Malus
            domestica]
          Length = 266

 Score = 63.2 bits (152), Expect = 4e-07
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = -2

Query: 1002 RSLFSPSLLPDNLV--SILKQLDDQGSCLRKFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            RS F  +   DN V  S    +D +    ++FPAAGAAPYVP+R  R PCHG+APPVTIR
Sbjct: 82   RSRFQSNATHDNRVTSSQASSIDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIR 141


>ref|XP_008385320.1| PREDICTED: double-stranded RNA-binding protein 2 [Malus domestica]
            gi|658028644|ref|XP_008349753.1| PREDICTED:
            double-stranded RNA-binding protein 2-like [Malus
            domestica] gi|658061022|ref|XP_008366361.1| PREDICTED:
            LOW QUALITY PROTEIN: double-stranded RNA-binding protein
            2-like [Malus domestica]
          Length = 428

 Score = 62.4 bits (150), Expect = 8e-07
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = -2

Query: 1002 RSLFSPSLLPDNLV--SILKQLDDQGSCLRKFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            RS +  +   DN V  S    LD +    ++FPAAGAAPYVP+R  R PCHG+APPVTIR
Sbjct: 237  RSRYQSNATHDNRVTSSQASPLDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIR 296


>ref|XP_007132261.1| hypothetical protein PHAVU_011G079700g [Phaseolus vulgaris]
           gi|561005261|gb|ESW04255.1| hypothetical protein
           PHAVU_011G079700g [Phaseolus vulgaris]
          Length = 410

 Score = 62.4 bits (150), Expect = 8e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -2

Query: 918 KFPAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
           KFPAAGAAPYVP+R  R+PCHGMAPPVTIR
Sbjct: 272 KFPAAGAAPYVPIRQMRSPCHGMAPPVTIR 301


>ref|XP_004487104.1| PREDICTED: double-stranded RNA-binding protein 2-like [Cicer
            arietinum]
          Length = 425

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
 Frame = -2

Query: 1065 RSSPSSSILPATTTA----AKVTNGRSLFSPSLLPDNLVSILKQLDDQGSCLRKFPAAGA 898
            RS PSS+       +    A VTN +S   P      L S    L+ +G+   KFPA GA
Sbjct: 237  RSKPSSATANENPRSRNLPAAVTNDKSTVQP------LQS--SALESRGTRPLKFPAVGA 288

Query: 897  APYVPVRNFRAPCHGMAPPVTIR 829
            APYVP+R  R PCHG+APPV +R
Sbjct: 289  APYVPIRQMRPPCHGIAPPVAMR 311


>gb|AFK41322.1| unknown [Lotus japonicus]
          Length = 285

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
 Frame = -2

Query: 1065 RSSPS-----SSILPATTTAAKVTNGRSLFSPSLLPDNLVSILKQ---LDDQGSCLRKFP 910
            RS PS      S+    + A    N RS + P+    +   +  Q   L+ +     KFP
Sbjct: 47   RSRPSLVTANDSVRSKPSFATANDNPRSKYPPAAATSDRSGVPPQSSALESRVFRPLKFP 106

Query: 909  AAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            AAGAAPYVP+R  R+PCHG+APPVT+R
Sbjct: 107  AAGAAPYVPLRQMRSPCHGVAPPVTVR 133


>ref|XP_007206726.1| hypothetical protein PRUPE_ppa024708mg, partial [Prunus persica]
            gi|462402368|gb|EMJ07925.1| hypothetical protein
            PRUPE_ppa024708mg, partial [Prunus persica]
          Length = 465

 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = -2

Query: 1062 SSPSSSILPATTTAAKVTNGRSLFSPSLLPDNLVSILKQLDDQGSCLR--KFPAAGAAPY 889
            S+ +S ILP      +    RS    +   DN +   +    +   LR  +FPAAGAAPY
Sbjct: 311  SAHTSKILPLI---CQKQAPRSRLQSNATNDNRIPSSQPSPLESRVLRPHRFPAAGAAPY 367

Query: 888  VPVRNFRAPCHGMAPPVTIR 829
            VP+R  R PCHG+APPVTIR
Sbjct: 368  VPIRQLRTPCHGIAPPVTIR 387


>gb|KHG19747.1| Double-stranded RNA-binding protein 2 [Gossypium arboreum]
          Length = 548

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
 Frame = -2

Query: 1056 PSSSILPATTTAAKVTNGRSLFSPSLLPDN------------LVSILKQLDDQGSCLRKF 913
            P+S   PATT+         L  P ++P N            L S     + +G   +KF
Sbjct: 154  PTSPQPPATTSKIL-----PLICPKVVPRNRSMSATVNEKPVLTSQTPTPESRGVRPQKF 208

Query: 912  PAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            PAAGAAPYVP+R  R PC G+APPVTIR
Sbjct: 209  PAAGAAPYVPIRQLRTPCCGIAPPVTIR 236


>gb|KHG19746.1| Double-stranded RNA-binding protein 2 [Gossypium arboreum]
          Length = 546

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
 Frame = -2

Query: 1056 PSSSILPATTTAAKVTNGRSLFSPSLLPDN------------LVSILKQLDDQGSCLRKF 913
            P+S   PATT+         L  P ++P N            L S     + +G   +KF
Sbjct: 154  PTSPQPPATTSKIL-----PLICPKVVPRNRSMSATVNEKPVLTSQTPTPESRGVRPQKF 208

Query: 912  PAAGAAPYVPVRNFRAPCHGMAPPVTIR 829
            PAAGAAPYVP+R  R PC G+APPVTIR
Sbjct: 209  PAAGAAPYVPIRQLRTPCCGIAPPVTIR 236


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