BLASTX nr result
ID: Cinnamomum25_contig00000922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00000922
(379 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 78 2e-12
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 75 2e-11
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 75 2e-11
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 72 1e-10
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 72 2e-10
ref|XP_010229988.1| PREDICTED: uncharacterized protein LOC104582... 70 5e-10
ref|XP_008366369.1| PREDICTED: uncharacterized protein LOC103430... 70 7e-10
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 70 7e-10
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 69 9e-10
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 69 9e-10
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 69 1e-09
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 69 1e-09
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp... 69 1e-09
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 69 1e-09
ref|XP_008385055.1| PREDICTED: uncharacterized protein LOC103447... 69 2e-09
emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera] 68 2e-09
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 68 2e-09
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 68 2e-09
gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposo... 68 3e-09
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 68 3e-09
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 78.2 bits (191), Expect = 2e-12
Identities = 41/73 (56%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = -3
Query: 221 LWHHRLGHPSSQLFQLLAP--SLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLE 48
+WH RLGHPS Q+ Q + +L G SK VC ACQKGK +LPF STS S+FPLE
Sbjct: 448 IWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKSHQLPFLKSTSASNFPLE 507
Query: 47 LFHSDVWGYSPTS 9
L SDVWG +P S
Sbjct: 508 LVFSDVWGPAPDS 520
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/72 (55%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = -3
Query: 218 WHHRLGHPSSQLFQ--LLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
WH RLGHPSS + Q L +L S VC ACQKGK +LP+ S S SS PLEL
Sbjct: 327 WHCRLGHPSSVIVQQVLSHNNLPCVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLEL 386
Query: 44 FHSDVWGYSPTS 9
HSDVWG +PTS
Sbjct: 387 IHSDVWGPAPTS 398
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/72 (55%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = -3
Query: 218 WHHRLGHPSSQLFQ--LLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
WH RLGHPSS + Q L +L S VC ACQKGK +LP+ S S SS PLEL
Sbjct: 400 WHCRLGHPSSVIVQQVLSHNNLPCVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLEL 459
Query: 44 FHSDVWGYSPTS 9
HSDVWG +PTS
Sbjct: 460 IHSDVWGPAPTS 471
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 72.4 bits (176), Expect = 1e-10
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
++WH RLGHP+ Q+ QLLA + +C +C+ GK SRLPF S I+S PLE
Sbjct: 447 EVWHMRLGHPNPQVLQLLANKKAIQINKSTSKMCESCRLGKSSRLPFIASDFIASRPLER 506
Query: 44 FHSDVWGYSPTSSL 3
H D+WG +P SS+
Sbjct: 507 VHCDLWGPAPVSSI 520
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 71.6 bits (174), Expect = 2e-10
Identities = 41/75 (54%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPS--LSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPL 51
D WH RLGHPSS +F L S LS G S CSACQ GK +LPF S+ SS PL
Sbjct: 458 DTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPL 517
Query: 50 ELFHSDVWGYSPTSS 6
L HSDVW SP S
Sbjct: 518 ALIHSDVW-VSPVQS 531
>ref|XP_010229988.1| PREDICTED: uncharacterized protein LOC104582265 [Brachypodium
distachyon]
Length = 608
Score = 70.1 bits (170), Expect = 5e-10
Identities = 32/66 (48%), Positives = 37/66 (56%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
D+WH RLGHP F LA SL C AC+ GK RLPF S+SI+ FP EL
Sbjct: 533 DVWHRRLGHPGKAAFARLATSLDFQCSKSASHTCHACRVGKHVRLPFSLSSSIAKFPFEL 592
Query: 44 FHSDVW 27
H D+W
Sbjct: 593 VHCDLW 598
>ref|XP_008366369.1| PREDICTED: uncharacterized protein LOC103430013 [Malus domestica]
Length = 590
Score = 69.7 bits (169), Expect = 7e-10
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = -3
Query: 218 WHHRLGHPSSQL--FQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
WH RLGHP+S + F +L + HG S ++ C +C GK S+LPF S S+S FPLEL
Sbjct: 478 WHSRLGHPASTIIKFLILNNQVPIHGTSDVK-FCQSCPLGKSSKLPFSSSESVSMFPLEL 536
Query: 44 FHSDVW 27
HSDVW
Sbjct: 537 LHSDVW 542
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 69.7 bits (169), Expect = 7e-10
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLSKHGPSKL-EPVCSACQKGKRSRLPFQPSTSISSFPLE 48
++WH RLGH ++++ LA S S +K+ + VC AC GK +RLPF ST +S PLE
Sbjct: 458 EVWHRRLGHANAEVLHQLASSKSIIIINKVVKTVCEACHLGKSTRLPFMLSTFNASRPLE 517
Query: 47 LFHSDVWGYSPTSSL 3
H D+WG SPTSS+
Sbjct: 518 RIHCDLWGPSPTSSV 532
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
++WH RLGHP+ + Q LA S + + +C +CQ K SRLPF S +++ PLE
Sbjct: 463 EVWHQRLGHPNPHILQRLASIKSVFINKRSKSLCVSCQMAKSSRLPFSASQFVATRPLER 522
Query: 44 FHSDVWGYSPTSSL 3
H DVWG SP S+
Sbjct: 523 IHCDVWGPSPVVSV 536
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 69.3 bits (168), Expect = 9e-10
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
++WH RLGHP Q+ Q L + S + +C ACQ GK +RLPF S+ S+ PLE
Sbjct: 465 EVWHRRLGHPHPQVLQQLVKTNSISINKTSKSLCEACQLGKSTRLPFVSSSFTSNRPLER 524
Query: 44 FHSDVWGYSPTSSL 3
H D+WG SP +S+
Sbjct: 525 VHCDLWGPSPITSV 538
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLSKH-GPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLE 48
D WHHRLGHPS + + S E VC+ACQ+ K +LPF S+S+S PLE
Sbjct: 451 DRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHPLE 510
Query: 47 LFHSDVWGYSPTS 9
L SDVWG +P S
Sbjct: 511 LVFSDVWGPAPES 523
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -3
Query: 224 DLWHHRLGHPSSQLFQLLAPSLS-KHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLE 48
++WHHRLGH +S+ Q L S + + S+ PVC CQ GK SRLPF S S PL+
Sbjct: 454 EVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVCEPCQMGKSSRLPFLISDSRVLHPLD 513
Query: 47 LFHSDVWGYSPTSS 6
H D+WG SP S
Sbjct: 514 RIHCDLWGPSPVVS 527
>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 1296
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 221 LWHHRLGHPSSQLFQLLAPSLSKHGP-SKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
+WH RLGHPSS L L SLS P + L +C ACQ GK +RLPF S +I+S E+
Sbjct: 496 IWHRRLGHPSSTLLSHLLSSLSISVPKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEI 555
Query: 44 FHSDVWGYSPTSSL 3
HSD+W SP S+
Sbjct: 556 VHSDIW-TSPVPSI 568
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = -3
Query: 218 WHHRLGHPSSQLFQLLAP--SLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
WH RLGHP+S + + + +L S + VC ACQ+GK +LP+ S+S+SS PLEL
Sbjct: 458 WHSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLEL 517
Query: 44 FHSDVWGYSPTS 9
+SDVWG + TS
Sbjct: 518 IYSDVWGPALTS 529
>ref|XP_008385055.1| PREDICTED: uncharacterized protein LOC103447646 [Malus domestica]
Length = 727
Score = 68.6 bits (166), Expect = 2e-09
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -3
Query: 221 LWHHRLGHPSSQLFQ-LLAPSLSKHGPSKLEPV-CSACQKGKRSRLPFQPSTSISSFPLE 48
+WH+RLGHPSS +F+ L S + K CS C GK +LPF S S S PLE
Sbjct: 518 IWHNRLGHPSSAIFRKTLNSSTIVYSDKKFTSFFCSDCAIGKNHKLPFTTSISFVSVPLE 577
Query: 47 LFHSDVWGYSPTSSL 3
L H DVWG +PT SL
Sbjct: 578 LVHCDVWGPTPTLSL 592
>emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]
Length = 1293
Score = 68.2 bits (165), Expect = 2e-09
Identities = 39/74 (52%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -3
Query: 221 LWHHRLGH-PSSQLFQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLEL 45
LWH RLGH PSSQ+ QL++ L SK C++CQ GK+ LPF S SIS+ EL
Sbjct: 284 LWHSRLGHTPSSQVQQLVSRGLLG-SVSKDNFDCTSCQLGKQPALPFNNSESISNSIFEL 342
Query: 44 FHSDVWGYSPTSSL 3
HSDVWG SP +S+
Sbjct: 343 IHSDVWGPSPIASI 356
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = -3
Query: 218 WHHRLGHPSSQLFQLLAPSLSKHG----PSKLEPVCSACQKGKRSRLPFQPSTSISSFPL 51
WH RLGHPS F +++ L KH S+ E VC ACQ+ K +LP+ S S SS PL
Sbjct: 446 WHSRLGHPS---FSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSRSVSRSSAPL 502
Query: 50 ELFHSDVWGYSPTS 9
EL SDVWG +P S
Sbjct: 503 ELVFSDVWGPAPQS 516
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = -3
Query: 218 WHHRLGHPSSQLFQLLAPSLSKHG----PSKLEPVCSACQKGKRSRLPFQPSTSISSFPL 51
WH RLGHPS F +++ L KH S+ E VC ACQ+ K +LP+ S S SS PL
Sbjct: 446 WHSRLGHPS---FSVVSRVLRKHNIPVSESREERVCDACQQAKSHQLPYSRSVSRSSAPL 502
Query: 50 ELFHSDVWGYSPTS 9
EL SDVWG +P S
Sbjct: 503 ELVFSDVWGPAPQS 516
>gb|KHN05629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1248
Score = 67.8 bits (164), Expect = 3e-09
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = -3
Query: 218 WHHRLGHPSSQLFQLLAPSLSKHGPSKLEPVCSACQKGKRSRLPFQPSTSISSFPLELFH 39
WHHRLGHPSS +F+ + S L+ C++CQ K +LPF ST S +PLE+
Sbjct: 369 WHHRLGHPSSSIFKFVQKHFSLGSNKFLQSGCNSCQISKSHKLPFHESTLKSCYPLEIIF 428
Query: 38 SDVW 27
SDVW
Sbjct: 429 SDVW 432
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 67.8 bits (164), Expect = 3e-09
Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = -3
Query: 221 LWHHRLGHPSSQLFQLLAPSLSKHGPSKLEPV--CSACQKGKRSRLPFQPSTSISSFPLE 48
LWH RLGH SS + LA S G K + CS C+ K S LPF STS+SS P +
Sbjct: 480 LWHSRLGHVSSSRLRFLA-STGALGNLKTCDISDCSGCKLAKFSALPFNRSTSVSSSPFD 538
Query: 47 LFHSDVWGYSPTSS 6
L HSDVWG SP S+
Sbjct: 539 LIHSDVWGPSPVST 552