BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00000615
         (3123 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containi...  1150   0.0  
ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containi...  1124   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]             1073   0.0  
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...  1073   0.0  
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,...  1056   0.0  
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...  1042   0.0  
ref|XP_010920271.1| PREDICTED: pentatricopeptide repeat-containi...  1026   0.0  
ref|XP_010088683.1| hypothetical protein L484_003235 [Morus nota...  1026   0.0  
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu...  1025   0.0  
ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containi...  1021   0.0  
ref|XP_010920273.1| PREDICTED: pentatricopeptide repeat-containi...  1017   0.0  
ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containi...  1017   0.0  
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi...  1016   0.0  
ref|XP_012442077.1| PREDICTED: pentatricopeptide repeat-containi...  1016   0.0  
ref|XP_012442072.1| PREDICTED: pentatricopeptide repeat-containi...  1016   0.0  
gb|KDO42798.1| hypothetical protein CISIN_1g005129mg [Citrus sin...  1016   0.0  
ref|XP_012442074.1| PREDICTED: pentatricopeptide repeat-containi...  1015   0.0  
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr...  1015   0.0  
ref|XP_011037244.1| PREDICTED: pentatricopeptide repeat-containi...  1015   0.0  
ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containi...  1012   0.0  

>ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 1161

 Score = 1150 bits (2974), Expect = 0.0
 Identities = 592/917 (64%), Positives = 714/917 (77%), Gaps = 13/917 (1%)
 Frame = -1

Query: 3066 EDMGHILSPGMINEVDVLEPESFVIDKPDLLCRGGVEETE---------IRPKVHNV-RS 2917
            E M   LS  ++ E    E   F  D P+L+ +G  EE           + PK  +V   
Sbjct: 253  ESMDPTLSSPVLGESASGEKVRFAKDMPELVLKGYQEEAVPWSELSGLLVDPKSSSVIHL 312

Query: 2916 KHALKEESTKIVEGGELSDELVVGEFQVSSFNGLSK-YVREDIYSFCEETQSGRRTLSCL 2740
            KH   E S +     EL DE   GE QVS++NG  +   RE+I++F EE QSG R++S  
Sbjct: 313  KHVPAEVSQEHQFKNELDDE---GEVQVSTYNGFFRPSFREEIHTFYEENQSGVRSISNF 369

Query: 2739 EGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASK 2560
                 + PH  L   ++ S LL    L+GAE S + L + T+Y + ++P++ YK+ S  +
Sbjct: 370  SSLKTVPPHISLNSNSNFSSLLRTNMLSGAEVS-EGLHNTTDYHERKMPLSCYKEGSCHR 428

Query: 2559 RRDSVKPGGVSRDRGLK--HQTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRL 2386
            R+D     G  RD G K   Q   R++H   QPNG+  + ++D S  +  Y+RLL  GR+
Sbjct: 429  RKDFRIGKGFPRDTGKKLTPQNGDRNLHHP-QPNGLHVSDRNDISGSIDAYNRLLSDGRV 487

Query: 2385 TDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSV 2206
            TDC+ELL+ +ERKGLLDM+KVYHA+FF  C+S+KAV EAF F KLI NPT+STFNMLLSV
Sbjct: 488  TDCVELLEDLERKGLLDMNKVYHAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSV 547

Query: 2205 CATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPN 2026
            CA+ QDS+G F+V + VKEAGLKADCKLYTTLISTCAK+GKVD MFEVFHEMVN GVEPN
Sbjct: 548  CASCQDSDGAFQVLQFVKEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPN 607

Query: 2025 VHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLA 1846
            VHTYGALIDGC RAGQVAKAFGAYGIMRSKKVKPDRV+FNALITACGQSGAVDRAFDVLA
Sbjct: 608  VHTYGALIDGCARAGQVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLA 667

Query: 1845 EMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQ 1666
            EMR E QPIDPDHVT+GALIKTCTQAGQVDRA EVY MIH+YNIKGTP+VYTIAVNSCSQ
Sbjct: 668  EMRTENQPIDPDHVTVGALIKTCTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQ 727

Query: 1665 VGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNIS 1486
             GDL+FAL++Y DM+RNGVVPDEMF SALIDVAGHAGK DVAF++++DAK QG+QLGN+S
Sbjct: 728  TGDLDFALNIYSDMRRNGVVPDEMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVS 787

Query: 1485 YSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMK 1306
            YSSLMGACS AKNWQKA ELYE++  IKL  TVS +NAL+TSLC+G QL KAV +L EMK
Sbjct: 788  YSSLMGACSNAKNWQKAQELYENIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMK 847

Query: 1305 KAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKA 1126
            + G+CP +ITYS+LL+ACEK DELELGF L S+AKK+G+ PNLIMC+CLTG+CL+RF K+
Sbjct: 848  EIGICPENITYSILLVACEKKDELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKS 907

Query: 1125 ASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLR 946
            +S+GEPVLSF+SGKPQ++NKWTS ALM YRETI AG          VLGCLQ P DT LR
Sbjct: 908  SSMGEPVLSFSSGKPQVNNKWTSLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLR 967

Query: 945  NRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDA 766
             RLVENLGV+++SS+ +++YS IDGFGEYD RSFSLLEEAASLG++ CVSFK+SPI+VD 
Sbjct: 968  ERLVENLGVNTSSSKHSSIYSLIDGFGEYDSRSFSLLEEAASLGVVPCVSFKESPIVVDT 1027

Query: 765  RKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQ 586
            RKL +HTAEVY LTIL+GLKHRLAAGA+LPN+ ILLP+EK++ +S+KG+RT++LAGR+GQ
Sbjct: 1028 RKLDVHTAEVYFLTILRGLKHRLAAGAKLPNVTILLPLEKTKFMSNKGNRTINLAGRIGQ 1087

Query: 585  AVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHK 406
            A+ ++LRRL L YQG ES GKIRI+GLALKRWFQPKL    S F GKPAEL +SPT L K
Sbjct: 1088 AIASLLRRLRLTYQGNESYGKIRINGLALKRWFQPKLD---SPFSGKPAELSSSPTRLGK 1144

Query: 405  EITNQQREIRTRNLSLE 355
             I++QQR IR+  LSLE
Sbjct: 1145 GISDQQRSIRSSKLSLE 1161


>ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Nelumbo nucifera]
          Length = 1133

 Score = 1124 bits (2907), Expect = 0.0
 Identities = 586/917 (63%), Positives = 703/917 (76%), Gaps = 13/917 (1%)
 Frame = -1

Query: 3066 EDMGHILSPGMINEVDVLEPESFVIDKPDLLCRGGVEETE---------IRPKVHNV-RS 2917
            E M   LS  ++ E    E   F  D P+L+ +G  EE           + PK  +V   
Sbjct: 253  ESMDPTLSSPVLGESASGEKVRFAKDMPELVLKGYQEEAVPWSELSGLLVDPKSSSVIHL 312

Query: 2916 KHALKEESTKIVEGGELSDELVVGEFQVSSFNGLSK-YVREDIYSFCEETQSGRRTLSCL 2740
            KH   E S +     EL DE   GE QVS++NG  +   RE+I++F EE QSG RT    
Sbjct: 313  KHVPAEVSQEHQFKNELDDE---GEVQVSTYNGFFRPSFREEIHTFYEENQSGVRT---- 365

Query: 2739 EGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASK 2560
                                      L+GAE S + L + T+Y + ++P++ YK+ S  +
Sbjct: 366  ------------------------NMLSGAEVS-EGLHNTTDYHERKMPLSCYKEGSCHR 400

Query: 2559 RRDSVKPGGVSRDRG--LKHQTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRL 2386
            R+D     G  RD G  L  Q   R++H   QPNG+  + ++D S  +  Y+RLL  GR+
Sbjct: 401  RKDFRIGKGFPRDTGKKLTPQNGDRNLHHP-QPNGLHVSDRNDISGSIDAYNRLLSDGRV 459

Query: 2385 TDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSV 2206
            TDC+ELL+ +ERKGLLDM+KVYHA+FF  C+S+KAV EAF F KLI NPT+STFNMLLSV
Sbjct: 460  TDCVELLEDLERKGLLDMNKVYHAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSV 519

Query: 2205 CATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPN 2026
            CA+ QDS+G F+V + VKEAGLKADCKLYTTLISTCAK+GKVD MFEVFHEMVN GVEPN
Sbjct: 520  CASCQDSDGAFQVLQFVKEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPN 579

Query: 2025 VHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLA 1846
            VHTYGALIDGC RAGQVAKAFGAYGIMRSKKVKPDRV+FNALITACGQSGAVDRAFDVLA
Sbjct: 580  VHTYGALIDGCARAGQVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLA 639

Query: 1845 EMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQ 1666
            EMR E QPIDPDHVT+GALIKTCTQAGQVDRA EVY MIH+YNIKGTP+VYTIAVNSCSQ
Sbjct: 640  EMRTENQPIDPDHVTVGALIKTCTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQ 699

Query: 1665 VGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNIS 1486
             GDL+FAL++Y DM+RNGVVPDEMF SALIDVAGHAGK DVAF++++DAK QG+QLGN+S
Sbjct: 700  TGDLDFALNIYSDMRRNGVVPDEMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVS 759

Query: 1485 YSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMK 1306
            YSSLMGACS AKNWQKA ELYE++  IKL  TVS +NAL+TSLC+G QL KAV +L EMK
Sbjct: 760  YSSLMGACSNAKNWQKAQELYENIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMK 819

Query: 1305 KAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKA 1126
            + G+CP +ITYS+LL+ACEK DELELGF L S+AKK+G+ PNLIMC+CLTG+CL+RF K+
Sbjct: 820  EIGICPENITYSILLVACEKKDELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKS 879

Query: 1125 ASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLR 946
            +S+GEPVLSF+SGKPQ++NKWTS ALM YRETI AG          VLGCLQ P DT LR
Sbjct: 880  SSMGEPVLSFSSGKPQVNNKWTSLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLR 939

Query: 945  NRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDA 766
             RLVENLGV+++SS+ +++YS IDGFGEYD RSFSLLEEAASLG++ CVSFK+SPI+VD 
Sbjct: 940  ERLVENLGVNTSSSKHSSIYSLIDGFGEYDSRSFSLLEEAASLGVVPCVSFKESPIVVDT 999

Query: 765  RKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQ 586
            RKL +HTAEVY LTIL+GLKHRLAAGA+LPN+ ILLP+EK++ +S+KG+RT++LAGR+GQ
Sbjct: 1000 RKLDVHTAEVYFLTILRGLKHRLAAGAKLPNVTILLPLEKTKFMSNKGNRTINLAGRIGQ 1059

Query: 585  AVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHK 406
            A+ ++LRRL L YQG ES GKIRI+GLALKRWFQPKL    S F GKPAEL +SPT L K
Sbjct: 1060 AIASLLRRLRLTYQGNESYGKIRINGLALKRWFQPKLD---SPFSGKPAELSSSPTRLGK 1116

Query: 405  EITNQQREIRTRNLSLE 355
             I++QQR IR+  LSLE
Sbjct: 1117 GISDQQRSIRSSKLSLE 1133


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 565/937 (60%), Positives = 697/937 (74%), Gaps = 18/937 (1%)
 Frame = -1

Query: 3111 EVLSSFSNNGFA-QTGEDMGHILSPGMINEVDVLEPESFVIDKPDLLCRGGVEETE---- 2947
            +VLSS + N  + +  E+ G  + P +++E  +L+P  F  + P+L       ETE    
Sbjct: 625  DVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYD 684

Query: 2946 ----------IRPKVHNVRSKHALKEESTKIVEGGELSDELVVGEFQVSSFNGLSK-YVR 2800
                      I   V ++ +   + E   +    GE        E ++ SF G+ +  +R
Sbjct: 685  LSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGE--------ESEIISFTGIFRDTIR 736

Query: 2799 EDIYSFCEETQSGRRTLSCLEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHA 2620
            E++Y+F E  QS  + +    G   ++ +  L +   +S  +       AE S +N   +
Sbjct: 737  EELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSS 796

Query: 2619 TEYFKERVPVAFYKDLSASKRRDSVKPGGVSRDRGLKHQTASRDMHRSLQP--NGIIANG 2446
             +Y + ++ ++ YK+ S+ KR D VK  G  RD+  +    S   + S  P  NG+    
Sbjct: 797  ADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKE 856

Query: 2445 KSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAF 2266
            K   SE  S Y+RLL  GRL+DCI+LL+ ME+ GLLDMDKVYHA+FFK CRS+KAV EAF
Sbjct: 857  KYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAF 916

Query: 2265 CFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNG 2086
             F KLI  PTLSTFNML+SVCATSQDS G F+V +LV+EAGLKADCKLYTTLISTCAK+G
Sbjct: 917  RFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSG 976

Query: 2085 KVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFN 1906
            KVD MFEVFHEMVN  VEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKV+PDRV+FN
Sbjct: 977  KVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFN 1036

Query: 1905 ALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIH 1726
            ALITACGQSGAVDRAFDVLAEMRAE QPIDPDH+T+GALIK CT AGQVDRA EVYKMI 
Sbjct: 1037 ALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMID 1096

Query: 1725 QYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKAD 1546
            QYNIKGTPEVYTIAV+S SQ+GD EFA SVY DM R GVVPDEMF SALIDVAGHAGK D
Sbjct: 1097 QYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLD 1156

Query: 1545 VAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALM 1366
             AFEV+Q+A+ QGI LG +SYSSLMGACS AKNWQKALELY D+K +KL  TVST+NAL+
Sbjct: 1157 AAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALI 1216

Query: 1365 TSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVF 1186
            T+LC+GEQL KA+++L++MK+AG+CPN ITYS+LL+A EK D++++G  + SQA+KD V 
Sbjct: 1217 TALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVA 1276

Query: 1185 PNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXX 1006
            PNL+MC+CL G+CL+RF KA ++GEPVLSFNSG+PQIDNKWTS ALM YRET++AG    
Sbjct: 1277 PNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPT 1336

Query: 1005 XXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEA 826
                  VLGCLQFP D  LRNRL+ENLGVS+++SRR+NL S IDGFGEYD R+FSLLEEA
Sbjct: 1337 MELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEA 1396

Query: 825  ASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEK 646
            ASLG++ CVSFK+SP+IVD R+LQI  AEVYLLT+LKGLKHRLAAGA+LP++ ILLP E 
Sbjct: 1397 ASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTET 1456

Query: 645  SQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKL 466
            +Q+++ KG++ ++LAGR+ QAV +MLRRLGL YQG ES GKIRI+GLA +RWFQP   KL
Sbjct: 1457 TQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQP---KL 1513

Query: 465  ASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            A  F GK  EL +S + L   I+ QQR+IRT NLSL+
Sbjct: 1514 AGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1550


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Vitis vinifera]
          Length = 1115

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 565/937 (60%), Positives = 697/937 (74%), Gaps = 18/937 (1%)
 Frame = -1

Query: 3111 EVLSSFSNNGFA-QTGEDMGHILSPGMINEVDVLEPESFVIDKPDLLCRGGVEETE---- 2947
            +VLSS + N  + +  E+ G  + P +++E  +L+P  F  + P+L       ETE    
Sbjct: 190  DVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYD 249

Query: 2946 ----------IRPKVHNVRSKHALKEESTKIVEGGELSDELVVGEFQVSSFNGLSK-YVR 2800
                      I   V ++ +   + E   +    GE        E ++ SF G+ +  +R
Sbjct: 250  LSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGE--------ESEIISFTGIFRDTIR 301

Query: 2799 EDIYSFCEETQSGRRTLSCLEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHA 2620
            E++Y+F E  QS  + +    G   ++ +  L +   +S  +       AE S +N   +
Sbjct: 302  EELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSS 361

Query: 2619 TEYFKERVPVAFYKDLSASKRRDSVKPGGVSRDRGLKHQTASRDMHRSLQP--NGIIANG 2446
             +Y + ++ ++ YK+ S+ KR D VK  G  RD+  +    S   + S  P  NG+    
Sbjct: 362  ADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKE 421

Query: 2445 KSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAF 2266
            K   SE  S Y+RLL  GRL+DCI+LL+ ME+ GLLDMDKVYHA+FFK CRS+KAV EAF
Sbjct: 422  KYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAF 481

Query: 2265 CFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNG 2086
             F KLI  PTLSTFNML+SVCATSQDS G F+V +LV+EAGLKADCKLYTTLISTCAK+G
Sbjct: 482  RFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSG 541

Query: 2085 KVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFN 1906
            KVD MFEVFHEMVN  VEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKV+PDRV+FN
Sbjct: 542  KVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFN 601

Query: 1905 ALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIH 1726
            ALITACGQSGAVDRAFDVLAEMRAE QPIDPDH+T+GALIK CT AGQVDRA EVYKMI 
Sbjct: 602  ALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMID 661

Query: 1725 QYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKAD 1546
            QYNIKGTPEVYTIAV+S SQ+GD EFA SVY DM R GVVPDEMF SALIDVAGHAGK D
Sbjct: 662  QYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLD 721

Query: 1545 VAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALM 1366
             AFEV+Q+A+ QGI LG +SYSSLMGACS AKNWQKALELY D+K +KL  TVST+NAL+
Sbjct: 722  AAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALI 781

Query: 1365 TSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVF 1186
            T+LC+GEQL KA+++L++MK+AG+CPN ITYS+LL+A EK D++++G  + SQA+KD V 
Sbjct: 782  TALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVA 841

Query: 1185 PNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXX 1006
            PNL+MC+CL G+CL+RF KA ++GEPVLSFNSG+PQIDNKWTS ALM YRET++AG    
Sbjct: 842  PNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPT 901

Query: 1005 XXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEA 826
                  VLGCLQFP D  LRNRL+ENLGVS+++SRR+NL S IDGFGEYD R+FSLLEEA
Sbjct: 902  MELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEA 961

Query: 825  ASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEK 646
            ASLG++ CVSFK+SP+IVD R+LQI  AEVYLLT+LKGLKHRLAAGA+LP++ ILLP E 
Sbjct: 962  ASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTET 1021

Query: 645  SQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKL 466
            +Q+++ KG++ ++LAGR+ QAV +MLRRLGL YQG ES GKIRI+GLA +RWFQP   KL
Sbjct: 1022 TQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQP---KL 1078

Query: 465  ASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            A  F GK  EL +S + L   I+ QQR+IRT NLSL+
Sbjct: 1079 AGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1115


>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 1110

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 552/920 (60%), Positives = 697/920 (75%), Gaps = 9/920 (0%)
 Frame = -1

Query: 3087 NGFAQTGEDMGHI---LSPGMINEVDVLEPESFVIDKPDLLCRGGVEETEIRPKVHNVRS 2917
            NGF    E+ G     L P ++ E   +EP  F  +  +L     +EE E   +      
Sbjct: 203  NGF-DVSEESGATDLPLPPTVLLESGAVEPLMFAAEMSEL----HLEEVERVNEFEADLP 257

Query: 2916 KHALKEESTK---IVEGGELSDELVVGEFQVSSFNGLSKY-VREDIYSFCEETQSGRRTL 2749
            + A++ ES+    +V+   +    +VGE +V+    + K  VRE++++F E  Q   ++ 
Sbjct: 258  RLAVEPESSASSVLVKDAHV----LVGEGEVTRHYDIFKESVREELHTFYEADQLVAKSS 313

Query: 2748 SCLEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLS 2569
            + L G    S         S S L+   +L  A+ S KN L   +  + +V  A    +S
Sbjct: 314  TNLNGLKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKNCLQTADMAEGKVAQACSNRVS 373

Query: 2568 ASKRRDSVKPGGVSRDRGLKH--QTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRA 2395
            + KR+D  +   + RD+G +H  Q  +  + +   PNG++A+ K  P ++  +Y+RLLR 
Sbjct: 374  SHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKFPFPNGMLADNKHRPEDHFRSYNRLLRD 433

Query: 2394 GRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNML 2215
            GRL+DC++LL+ ME++GLLDM+KVYHA+FFK C  +KAVKEAFCFTKLI NPTLSTFNML
Sbjct: 434  GRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKICNRQKAVKEAFCFTKLIPNPTLSTFNML 493

Query: 2214 LSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGV 2035
            +SVCA+SQDS+G FEV R+V+EAG KADCKLYTTLISTCAK+GKVDTMFEVFHEMVN+GV
Sbjct: 494  MSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAKSGKVDTMFEVFHEMVNSGV 553

Query: 2034 EPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFD 1855
            EPNV+TYGALIDGC RAGQVAKAFGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFD
Sbjct: 554  EPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFD 613

Query: 1854 VLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNS 1675
            VLAEM AE QPIDPDHVT+GALIK C+ A QVDRA EVYKMIH+++IKGTPEVYTIAVN 
Sbjct: 614  VLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKMIHEFSIKGTPEVYTIAVNC 673

Query: 1674 CSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLG 1495
            CSQ GD EFA SVY DMK  GV PDE+F SALIDVAGHAGK D AFE+L++AK+QGI +G
Sbjct: 674  CSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILEEAKNQGINVG 733

Query: 1494 NISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILA 1315
             +SYSSLMGACS A+NWQKALELYE++K +KL LTVST+NAL+TSLC+ +QL KA++IL+
Sbjct: 734  IVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQLPKAMEILS 793

Query: 1314 EMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRF 1135
            EM++ G+CPN +TYS+LL+A E+ D+LE+G  L SQA+KDGV PNLIM +C+ G+CL+RF
Sbjct: 794  EMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNLIMARCIIGMCLRRF 853

Query: 1134 LKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDT 955
             KA  +GEPVLSFNSG+P I+NKWTS AL  YRETI AG          +LGCLQ P D 
Sbjct: 854  EKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPTMDVISQILGCLQLPRDD 913

Query: 954  PLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPII 775
             L++RLVENL VS++++R ++L S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+SPI+
Sbjct: 914  SLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPIV 973

Query: 774  VDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGR 595
            VDAR+LQI+ AEVYLLTILKGLKHR AAGA+LP+I++LLP+EK+Q+++ + +++++LAGR
Sbjct: 974  VDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPLEKTQVLTPEREKSINLAGR 1033

Query: 594  VGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTH 415
            +GQA+ A+LRR+GL YQG ES GKIRI+GLALKRWFQP   KLAS F GKP E   S   
Sbjct: 1034 IGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQP---KLASPFTGKPGEWNASQMR 1090

Query: 414  LHKEITNQQREIRTRNLSLE 355
            L K I++QQR IRT NLSL+
Sbjct: 1091 LGKGISHQQRNIRTGNLSLD 1110


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score = 1042 bits (2695), Expect = 0.0
 Identities = 544/898 (60%), Positives = 672/898 (74%), Gaps = 2/898 (0%)
 Frame = -1

Query: 3042 PGMINEVDVLEPESFVIDKPDLLCRGGVEETEIRPKVHNVRSKHALKEESTKIVEGGELS 2863
            P M+++   ++P SF  +  +L    G E+ +I     +V    A  E S   V  G L+
Sbjct: 199  PFMLSDSGGVQPHSFATEMSELQL--GKEKKDIESCESSVLENDAHAEVSVPTVSYGVLT 256

Query: 2862 DELVVGEFQVSSFNGLSKYVREDIYSFCEETQSGRRTLSCLEGASAISPHCRLQEKASIS 2683
            +                  VRE+ ++    +QS  ++ + LE   AIS H       S+S
Sbjct: 257  ES-----------------VREEQFACGRASQSVLKSPANLEFVKAISSHASPLNGYSLS 299

Query: 2682 PLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASK--RRDSVKPGGVSRDRGLK 2509
             L    +  G E SL+  L   E+ + ++ +A +++  + K   R  ++    + +R   
Sbjct: 300  SLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERINL 359

Query: 2508 HQTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMD 2329
             Q   ++M +   PNG  AN   D SE L +Y+RL+R GR++DCI+LL+ MERKGLLDMD
Sbjct: 360  MQDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMD 419

Query: 2328 KVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKE 2149
            KVYHARFF  C+S+KA+KEAF F KL+ NPTLSTFNML+SVCA+S+DSEG F+V RLV+E
Sbjct: 420  KVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQE 479

Query: 2148 AGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAK 1969
            AGLKADCKLYTTLI+TCAK+GKVD MFEVFHEMVN G+EPNVHTYGALIDGC +AGQVAK
Sbjct: 480  AGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAK 539

Query: 1968 AFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGAL 1789
            AFGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+TIGAL
Sbjct: 540  AFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGAL 599

Query: 1788 IKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGV 1609
            +K C  AGQVDRA EVYKMIH+YNIKGTPEVYTIA+N CSQ GD EFA SVY DM + GV
Sbjct: 600  MKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGV 659

Query: 1608 VPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALE 1429
            +PDE+F SALID AGHAGK + AFE+LQ+AK+QGI +G ISYSSLMGACS AKNWQKALE
Sbjct: 660  IPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALE 719

Query: 1428 LYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACE 1249
            LYE +K IKL  TVST+NAL+T+LCDG++L K +++L++MK  G+CPN ITYS+LL+ACE
Sbjct: 720  LYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSILLVACE 779

Query: 1248 KNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDN 1069
            + D++E+G  L SQAK+DGV PNL+M KC+ G+C +R+ KA ++ E VLSFNSG+PQI+N
Sbjct: 780  RKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIEN 839

Query: 1068 KWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANL 889
            KWTS  LM YRE I AG          VLGCLQ P++  +R RLVENLGVS+++ +R+NL
Sbjct: 840  KWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNL 899

Query: 888  YSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGL 709
             S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+SP++VDARKL+IHTA+VYLLTILKGL
Sbjct: 900  CSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEIHTAKVYLLTILKGL 959

Query: 708  KHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESL 529
            +HRLAAGA+LPN+NILLPVEK+QI+S  G++T+ +A R  QA+ A+LRRLGL YQG  S 
Sbjct: 960  RHRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPYQGNGSY 1019

Query: 528  GKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            GKIRI+GLALKRWFQP   KLAS F GKP EL  S   L K IT+QQR IRT NLSLE
Sbjct: 1020 GKIRINGLALKRWFQP---KLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSLE 1072


>ref|XP_010920271.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Elaeis guineensis]
          Length = 1104

 Score = 1026 bits (2654), Expect = 0.0
 Identities = 537/860 (62%), Positives = 657/860 (76%), Gaps = 5/860 (0%)
 Frame = -1

Query: 2919 SKHALKEESTKIVEGGELSDELVVG-EFQVSSFNGLSKYVREDIYSFCEETQSGRRTLSC 2743
            S   ++++  +I +  EL      G E   S ++GL K   + +Y++ EE    R ++SC
Sbjct: 252  SSAQVEKKQIEINQDNELDCIAAKGDELCPSIYDGLMKQNAKAVYAYNEEMPEVR-SISC 310

Query: 2742 LEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSAS 2563
             +  SA   H  L + +S    L      G   +  +   A    + + P A + +   S
Sbjct: 311  FKSLSAGPLHLILHDNSSSYSRLRHAVKFGGIRAKASPCSA----EGQKPSACFNEGRTS 366

Query: 2562 KRRDSVKPGGVSRDRGLKHQTASRD-MHRSL--QPNGIIANGKSDPSEYLSTYSRLLRAG 2392
            K ++  K    +RD G      + D  + SL  +PNG +  G + P  YL  Y RLLR G
Sbjct: 367  KGKEIDKLHRFTRDMGRSPGHGNDDNANLSLFPEPNGNLVKGTNYPPGYLRAYDRLLRHG 426

Query: 2391 RLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLL 2212
            RL DC++LL+SMERKGLLDMDKV+H  F KAC+ +KA+KEAF F+KLI+NP++STFNMLL
Sbjct: 427  RLRDCVDLLESMERKGLLDMDKVHHTSFLKACKGQKALKEAFRFSKLIRNPSMSTFNMLL 486

Query: 2211 SVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVE 2032
            SVCA+SQD +G F+V  L+KEAGLK DCKLYTTLISTCAK+GKVD MFE+FHEMVN G+E
Sbjct: 487  SVCASSQDFDGAFQVMLLIKEAGLKPDCKLYTTLISTCAKSGKVDAMFEIFHEMVNAGIE 546

Query: 2031 PNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDV 1852
            PNV+TYGALIDGC RAGQVAKAFGAYGIMRSKKV+PDRV+FNALITACG+SGAVDRAFDV
Sbjct: 547  PNVNTYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVVFNALITACGESGAVDRAFDV 606

Query: 1851 LAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSC 1672
            LAEMRAE +PIDPDHVTIGALIKTCTQAGQVDRA EVYKM+H+YNIKGTPEVYTIAV SC
Sbjct: 607  LAEMRAEPKPIDPDHVTIGALIKTCTQAGQVDRAHEVYKMLHEYNIKGTPEVYTIAVKSC 666

Query: 1671 SQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGN 1492
            SQ GDLEFAL +Y DMKRNGVVPDEMF S LIDVAGHAGK D AF +LQDAK++G+QLG+
Sbjct: 667  SQRGDLEFALRIYDDMKRNGVVPDEMFLSTLIDVAGHAGKVDAAFRILQDAKNKGVQLGH 726

Query: 1491 ISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAE 1312
            +SYSSLMGAC  AK+WQKALELYE++K IKLL TVS LNAL+TSLCDG Q+ K+V++L E
Sbjct: 727  VSYSSLMGACCNAKSWQKALELYEEIKAIKLLPTVSMLNALITSLCDGYQILKSVEVLDE 786

Query: 1311 MKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFL 1132
            MKK GV PN ITYSVL++ CE+  E ELGF L ++AK DGV PNLIMC+CLTGLCL+ F 
Sbjct: 787  MKKLGVSPNVITYSVLIVGCERAGEAELGFTLLAEAKGDGVLPNLIMCRCLTGLCLRSFE 846

Query: 1131 KAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTP 952
            KA +  EP+++FN G+PQIDNKWTS A+  YRETI+AG          VLGCLQFP D+ 
Sbjct: 847  KACAGDEPIVTFNYGRPQIDNKWTSLAIKVYRETISAGVKPTIEVFSQVLGCLQFPRDSS 906

Query: 951  LRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIV 772
             R + +ENLG+S ++SR +N+ S +DGFGEYD RSFS+LEEAASLG++   SFK+SPI+V
Sbjct: 907  FRKKFIENLGISFDTSRCSNISSLLDGFGEYDTRSFSILEEAASLGVVSRFSFKESPIVV 966

Query: 771  DARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRV 592
            DARKL+IH  EVYLLTILKGLKHRLA+GARLPNI I+LP+EK+QI S K ++T+ +AGRV
Sbjct: 967  DARKLEIHAVEVYLLTILKGLKHRLASGARLPNITIVLPIEKTQIQSAKREKTIIVAGRV 1026

Query: 591  GQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHL 412
            GQAVG++LRRLGL YQG ES GKIRI+GL+L+RWF+PK+T   S F  +P E+  + THL
Sbjct: 1027 GQAVGSLLRRLGLPYQGDESYGKIRITGLSLRRWFKPKIT--GSTFARRPGEMIPTSTHL 1084

Query: 411  HKEITNQQREIRT-RNLSLE 355
             K I +QQR IR+  NLSLE
Sbjct: 1085 AKGIADQQRSIRSNNNLSLE 1104


>ref|XP_010088683.1| hypothetical protein L484_003235 [Morus notabilis]
            gi|587846355|gb|EXB36850.1| hypothetical protein
            L484_003235 [Morus notabilis]
          Length = 1125

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 542/940 (57%), Positives = 688/940 (73%), Gaps = 22/940 (2%)
 Frame = -1

Query: 3108 VLSSFSNNGFAQTGEDMGHILSPGMINEVDVLEP-------ESFVIDKPDLLCRGGVEET 2950
            ++S  SN+ F      +   LSP +++E  +LEP         F +DK     R  +E +
Sbjct: 194  LVSGASNSTFLNESSVLDQSLSP-LLSESAILEPLNLPESLNGFQLDK----LREEIESS 248

Query: 2949 EI---RPKVHNVRSKHALKEESTKIVEGGELSDEL---------VVGEFQVSSFNGL-SK 2809
            E       V +  S H  +E  +K    G    EL         +  E +++S+N L  +
Sbjct: 249  ESLFGSASVQDNGSVHLQEEIVSKFKVNGHSVAELHEDETDKRRLGEEGEMTSYNFLLGE 308

Query: 2808 YVREDIYSFCEETQSGRRTLSCLEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNL 2629
             VR++++ F +E +S  + +  + G +++SP+       ++S  L    + G E +    
Sbjct: 309  SVRKELHMFYDENKSDEKGIGKINGHNSLSPNASAPNSKTVSASLRDTIVKGGEATALFP 368

Query: 2628 LHATEYFKERVPVAFYKDLSASKRRDSVKPGGVSRD--RGLKHQTASRDMHRSLQPNGII 2455
                +  + ++P + +K+ +    ++S +  G SRD  +G   Q   +   +  + NG+ 
Sbjct: 369  PLKADNHESKIPFSSHKEGTLRSGKNSGQGRGYSRDLIKGNLAQNNHKAPAKLTRLNGLD 428

Query: 2454 ANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVK 2275
               K  PSE +STY+RL++ GRL+D +ELL+ MER+GLLDM+KVYHA+FFK C+ +KAV 
Sbjct: 429  VEQKHHPSEQISTYNRLVKDGRLSDAVELLEDMERRGLLDMNKVYHAKFFKICKFQKAVN 488

Query: 2274 EAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCA 2095
            EAF +  LI  PTLST+NML+SVC +SQD EG F+V +LV+EAGLKADCKLYTTLISTCA
Sbjct: 489  EAFRYVNLIPYPTLSTYNMLMSVCTSSQDPEGAFKVMQLVQEAGLKADCKLYTTLISTCA 548

Query: 2094 KNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRV 1915
            K+GKVD+MFEVFH+MVN GVEPNVHTYG+LIDGC RAGQVAKAFGAYGIMRSK VKPDRV
Sbjct: 549  KSGKVDSMFEVFHKMVNDGVEPNVHTYGSLIDGCARAGQVAKAFGAYGIMRSKNVKPDRV 608

Query: 1914 IFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYK 1735
            +FNALITACGQSGAVDRAFDVLAEM AE + IDPDH+T+GAL+K C  +GQVDRA EVYK
Sbjct: 609  VFNALITACGQSGAVDRAFDVLAEMTAEPELIDPDHITVGALMKACANSGQVDRAREVYK 668

Query: 1734 MIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAG 1555
            M+HQYN+KGTPEVYTIAVN+ S +GD EFA +VY DM R GV+PDEMF SALID AGHAG
Sbjct: 669  MVHQYNLKGTPEVYTIAVNTSSHMGDWEFARNVYDDMTRKGVLPDEMFLSALIDAAGHAG 728

Query: 1554 KADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLN 1375
            K D AFE+L +AK++G++ G +SYSSLMGACS AKNWQKALELYEDLK  K   TVST+N
Sbjct: 729  KLDAAFEILSEAKNRGVKFGTVSYSSLMGACSNAKNWQKALELYEDLKSTKSEQTVSTVN 788

Query: 1374 ALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKD 1195
            AL+T+LCDG+QL KA+++L+EMK  G+ PN ITYS+LL+A EK D+LE+G  LFSQAKKD
Sbjct: 789  ALITALCDGDQLQKAMEVLSEMKALGLSPNSITYSILLVASEKKDDLEVGLVLFSQAKKD 848

Query: 1194 GVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGX 1015
            G+ PNL+M +C+ G CL+R+  A+++GEPVLSF+ G+PQ+ NKWTS ALM YR+TIAAG 
Sbjct: 849  GISPNLLMSRCILGTCLRRYENASTLGEPVLSFDPGRPQVVNKWTSSALMVYRDTIAAGV 908

Query: 1014 XXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLL 835
                     VLGCLQ PHD  L+NRL+ENL VS ++SR +NL S IDGFGEYDPR+FSLL
Sbjct: 909  TPTIDVLSQVLGCLQLPHDPSLKNRLIENLAVSVDTSRPSNLSSLIDGFGEYDPRAFSLL 968

Query: 834  EEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLP 655
            EEAAS GII CVSFKQSP+IVD R+LQIHTAEVYLLT+LKGLK+RLAAGA+LP I ILLP
Sbjct: 969  EEAASFGIISCVSFKQSPVIVDTRELQIHTAEVYLLTVLKGLKNRLAAGAKLPTITILLP 1028

Query: 654  VEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKL 475
            VEK+Q+ S K ++T++LAGR+G+AV A+LRRLGL YQG ES GKIRI GL LKRWF+P  
Sbjct: 1029 VEKAQLTSPKEEKTINLAGRIGRAVAALLRRLGLPYQGHESHGKIRIYGLTLKRWFKP-- 1086

Query: 474  TKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
             KLAS F G+P E+  S   L KEI +QQR IRT NLSL+
Sbjct: 1087 -KLASPFSGRPEEINLSQFRLGKEIAHQQRNIRTGNLSLD 1125


>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            gi|550341229|gb|EEE86674.2| hypothetical protein
            POPTR_0004s17400g [Populus trichocarpa]
          Length = 1104

 Score = 1025 bits (2651), Expect = 0.0
 Identities = 544/901 (60%), Positives = 664/901 (73%), Gaps = 5/901 (0%)
 Frame = -1

Query: 3042 PGMINEVDVLEPESFVIDKPDLLCRGGVEE----TEIRPKVHNVRSKHALKEESTKIVEG 2875
            P +++E     P  F     +L      EE    +E+   V  V+S   L     + +E 
Sbjct: 223  PSVLSESGSALPLIFATQMTELTQEKSGEEIEFGSELSGSVEKVKSNAVLVPVDNESIEK 282

Query: 2874 GELSDELVVGEFQVSSFNG-LSKYVREDIYSFCEETQSGRRTLSCLEGASAISPHCRLQE 2698
             ELS           S+NG +S+ VRED+Y+F    +S  ++ S L G    S H  L +
Sbjct: 283  AELS-----------SYNGAISQSVREDLYTFYGANRSVVKSASNL-GLKETSSHASLLK 330

Query: 2697 KASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASKRRDSVKPGGVSRDR 2518
                S L M   L   + S +  L A ++ ++ +P A Y+  S  K ++   PG  S++R
Sbjct: 331  SKRFSSLKMNTGLETEDLSSQQPLQAADHVQKTMPPAHYEGGSFHKSKNL--PG--SKER 386

Query: 2517 GLKHQTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLL 2338
                Q +   + +   PNGI +  K  P E  + Y+RLLR GRL +C++LL+ MER+GLL
Sbjct: 387  KHPIQDSHSKLRQLPSPNGIPSKVKDHPPEEYNAYNRLLREGRLAECLDLLEDMERRGLL 446

Query: 2337 DMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRL 2158
            DM+KVYH +FFK CRS+KAVKEAF F KL++NPTLSTFNML+SVCATSQ+S G FEV +L
Sbjct: 447  DMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCATSQNSAGAFEVLQL 506

Query: 2157 VKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQ 1978
             K  GLKADCKLYTTLISTCAK+GKVD MFEVFHEMVN GVEPNVHTYGALIDGC RAGQ
Sbjct: 507  AKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQ 566

Query: 1977 VAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTI 1798
            VAKAFGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM  EAQPIDPDH+T+
Sbjct: 567  VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITV 626

Query: 1797 GALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKR 1618
            GALIK CT AGQVDRA EVY M+H+YNIKGTPEVYTIA+NSCSQ+GD EFA  VY DM R
Sbjct: 627  GALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVYDDMTR 686

Query: 1617 NGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQK 1438
             GVVPDEMF SALIDVAGHAGK D AFE++Q AK++G QLG I YSSLMGAC  AKNWQK
Sbjct: 687  KGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPYSSLMGACCNAKNWQK 746

Query: 1437 ALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLM 1258
             LELYED+K +K+  TV+T+NAL+T+LCDG+QL KA+++L+EMK  G+ PN ITYS+L +
Sbjct: 747  GLELYEDIKSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPNTITYSILSV 806

Query: 1257 ACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQ 1078
            A E+ D+LE G  L SQAKKD V P LIM KC+  +CL++F  A ++GE VLSFNSG+ Q
Sbjct: 807  ASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLRKFENACTLGEAVLSFNSGRAQ 866

Query: 1077 IDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRR 898
            I+NKWTS ALM YR T+AAG          VLGCLQ P D  L+NRLVENLGV++ SSR 
Sbjct: 867  IENKWTSVALMVYRGTMAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLGVTAVSSRY 926

Query: 897  ANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTIL 718
            +NL S +DGFGEYDPR+FSLLEEAASLGI+ CVSFK+SPI +DA++LQIH AEVY LTIL
Sbjct: 927  SNLCSLVDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPITMDAKQLQIHIAEVYFLTIL 986

Query: 717  KGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGK 538
            KGLKHRLAAGA+LPN+ ILLPVEK+Q+I+ +G++T+++AGR+ +AV ++LRRLGL YQG 
Sbjct: 987  KGLKHRLAAGAKLPNVTILLPVEKAQVITLEGEKTINVAGRISRAVASLLRRLGLPYQGN 1046

Query: 537  ESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSL 358
            ES GKIRI+G++L+RW QPKL    S F GKP E  TS + L K I+ QQR IRT + SL
Sbjct: 1047 ESYGKIRINGISLRRWLQPKLD---SPFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSL 1103

Query: 357  E 355
            E
Sbjct: 1104 E 1104


>ref|XP_011037246.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 1104

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 537/867 (61%), Positives = 652/867 (75%), Gaps = 1/867 (0%)
 Frame = -1

Query: 2952 TEIRPKVHNVRSKHALKEESTKIVEGGELSDELVVGEFQVSSFNG-LSKYVREDIYSFCE 2776
            +E+   V  V+S   L     + ++  ELS+           +NG +S+ VRED+Y+F  
Sbjct: 257  SELSESVEKVKSNAVLVPVDNESIDKAELSN-----------YNGAISQSVREDLYTFYG 305

Query: 2775 ETQSGRRTLSCLEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERV 2596
              +S  ++ S L G    S H  L +    S L M   L   + S +  L A ++ ++ +
Sbjct: 306  ANRSVVKSASNL-GLKETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKIM 364

Query: 2595 PVAFYKDLSASKRRDSVKPGGVSRDRGLKHQTASRDMHRSLQPNGIIANGKSDPSEYLST 2416
            P+A  +  S  K ++  +    SR+R    Q +   + +   PNGI +  K  PSE  + 
Sbjct: 365  PLAHNEGGSFHKSKNLPR----SRERKHPIQDSHSKLRQLPSPNGIPSKVKDHPSEDYNA 420

Query: 2415 YSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPT 2236
            Y+RLLR GRL +C++LL+ MER+GLLDM+KVYH +FFK CRS+KAVKEAF F KL++NPT
Sbjct: 421  YNRLLREGRLAECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPT 480

Query: 2235 LSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFH 2056
            LSTFNML+SVCA+SQ+S G FEV +L K  GLKADCKLYTTLISTCAK+GKVD MFEVFH
Sbjct: 481  LSTFNMLMSVCASSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFH 540

Query: 2055 EMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSG 1876
            EMVN GVEPNVHTYGALIDGC RAGQVAKAFGAYGIMRSK VKPDRV+FNALITACGQSG
Sbjct: 541  EMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 600

Query: 1875 AVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEV 1696
            AVDRAFDVLAEM  EAQPIDPDH+T+GALIK CT AGQVDRA EVY M+H+YNIKGTPEV
Sbjct: 601  AVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEV 660

Query: 1695 YTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAK 1516
            YTIA+NS SQ+GD EFA  VY DM R GVVPDEMF SALIDVAGHAGK D AFE++Q+AK
Sbjct: 661  YTIAINSSSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAK 720

Query: 1515 SQGIQLGNISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLY 1336
            ++G QLG I YSSLMGAC  AKNWQK LELYED+K +KL  TV+TLNAL+T+LCDG+QL 
Sbjct: 721  AKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKLKPTVATLNALITALCDGDQLS 780

Query: 1335 KAVDILAEMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLT 1156
            KA+++L+EMK  G+ PN ITYS+L +A E+ D+LE G  L SQAKKD V P LIM KC+ 
Sbjct: 781  KALEVLSEMKVWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMVKCII 840

Query: 1155 GLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGC 976
             +CL++F  A ++GEPVLSFNSG+ QI+NKWTS ALM YR TIAAG          VLGC
Sbjct: 841  SMCLRKFENACTLGEPVLSFNSGRAQIENKWTSVALMAYRGTIAAGEKPTIELVSQVLGC 900

Query: 975  LQFPHDTPLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVS 796
            LQ P D  L+NRLVENLGV++  SR +NL S +DGFGEYDPR+FSLLEEAASLGI+ CVS
Sbjct: 901  LQIPCDATLKNRLVENLGVTAVPSRYSNLCSLVDGFGEYDPRAFSLLEEAASLGIVPCVS 960

Query: 795  FKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHKGDR 616
            FK+SPI +DA++LQIH AEVY LTILKGLKHRLAAGA+LPNI ILLPVEK+Q I+ +G++
Sbjct: 961  FKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNITILLPVEKAQAITLEGEK 1020

Query: 615  TVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGKPAE 436
            T+++AGR+ QAV ++LRRLGL YQG ES GKIRI+G++L+RW QPKL    S F GKP E
Sbjct: 1021 TINVAGRISQAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLD---SPFSGKPGE 1077

Query: 435  LGTSPTHLHKEITNQQREIRTRNLSLE 355
              TS + L K I+ QQR IRT + SLE
Sbjct: 1078 WSTSLSRLGKGISFQQRNIRTGDFSLE 1104


>ref|XP_010920273.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X3 [Elaeis guineensis]
          Length = 784

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 513/751 (68%), Positives = 612/751 (81%), Gaps = 4/751 (0%)
 Frame = -1

Query: 2595 PVAFYKDLSASKRRDSVKPGGVSRDRGLKHQTASRD-MHRSL--QPNGIIANGKSDPSEY 2425
            P A + +   SK ++  K    +RD G      + D  + SL  +PNG +  G + P  Y
Sbjct: 36   PSACFNEGRTSKGKEIDKLHRFTRDMGRSPGHGNDDNANLSLFPEPNGNLVKGTNYPPGY 95

Query: 2424 LSTYSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIK 2245
            L  Y RLLR GRL DC++LL+SMERKGLLDMDKV+H  F KAC+ +KA+KEAF F+KLI+
Sbjct: 96   LRAYDRLLRHGRLRDCVDLLESMERKGLLDMDKVHHTSFLKACKGQKALKEAFRFSKLIR 155

Query: 2244 NPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFE 2065
            NP++STFNMLLSVCA+SQD +G F+V  L+KEAGLK DCKLYTTLISTCAK+GKVD MFE
Sbjct: 156  NPSMSTFNMLLSVCASSQDFDGAFQVMLLIKEAGLKPDCKLYTTLISTCAKSGKVDAMFE 215

Query: 2064 VFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACG 1885
            +FHEMVN G+EPNV+TYGALIDGC RAGQVAKAFGAYGIMRSKKV+PDRV+FNALITACG
Sbjct: 216  IFHEMVNAGIEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVVFNALITACG 275

Query: 1884 QSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGT 1705
            +SGAVDRAFDVLAEMRAE +PIDPDHVTIGALIKTCTQAGQVDRA EVYKM+H+YNIKGT
Sbjct: 276  ESGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCTQAGQVDRAHEVYKMLHEYNIKGT 335

Query: 1704 PEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQ 1525
            PEVYTIAV SCSQ GDLEFAL +Y DMKRNGVVPDEMF S LIDVAGHAGK D AF +LQ
Sbjct: 336  PEVYTIAVKSCSQRGDLEFALRIYDDMKRNGVVPDEMFLSTLIDVAGHAGKVDAAFRILQ 395

Query: 1524 DAKSQGIQLGNISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGE 1345
            DAK++G+QLG++SYSSLMGAC  AK+WQKALELYE++K IKLL TVS LNAL+TSLCDG 
Sbjct: 396  DAKNKGVQLGHVSYSSLMGACCNAKSWQKALELYEEIKAIKLLPTVSMLNALITSLCDGY 455

Query: 1344 QLYKAVDILAEMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCK 1165
            Q+ K+V++L EMKK GV PN ITYSVL++ CE+  E ELGF L ++AK DGV PNLIMC+
Sbjct: 456  QILKSVEVLDEMKKLGVSPNVITYSVLIVGCERAGEAELGFTLLAEAKGDGVLPNLIMCR 515

Query: 1164 CLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXV 985
            CLTGLCL+ F KA +  EP+++FN G+PQIDNKWTS A+  YRETI+AG          V
Sbjct: 516  CLTGLCLRSFEKACAGDEPIVTFNYGRPQIDNKWTSLAIKVYRETISAGVKPTIEVFSQV 575

Query: 984  LGCLQFPHDTPLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQ 805
            LGCLQFP D+  R + +ENLG+S ++SR +N+ S +DGFGEYD RSFS+LEEAASLG++ 
Sbjct: 576  LGCLQFPRDSSFRKKFIENLGISFDTSRCSNISSLLDGFGEYDTRSFSILEEAASLGVVS 635

Query: 804  CVSFKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHK 625
              SFK+SPI+VDARKL+IH  EVYLLTILKGLKHRLA+GARLPNI I+LP+EK+QI S K
Sbjct: 636  RFSFKESPIVVDARKLEIHAVEVYLLTILKGLKHRLASGARLPNITIVLPIEKTQIQSAK 695

Query: 624  GDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGK 445
             ++T+ +AGRVGQAVG++LRRLGL YQG ES GKIRI+GL+L+RWF+PK+T   S F  +
Sbjct: 696  REKTIIVAGRVGQAVGSLLRRLGLPYQGDESYGKIRITGLSLRRWFKPKIT--GSTFARR 753

Query: 444  PAELGTSPTHLHKEITNQQREIRT-RNLSLE 355
            P E+  + THL K I +QQR IR+  NLSLE
Sbjct: 754  PGEMIPTSTHLAKGIADQQRSIRSNNNLSLE 784


>ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Prunus mume]
          Length = 1065

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 533/852 (62%), Positives = 651/852 (76%), Gaps = 3/852 (0%)
 Frame = -1

Query: 2901 EESTKIVEGGELSDELVVGEFQVSSFNGLSKY-VREDIYSFCEETQSGRRTLSCLEGASA 2725
            EE+ ++ E  E+ +   VGE   +SF+ L++  VRE+++ F E  +S  ++++ L G   
Sbjct: 246  EENDEVGESDEVGESDEVGE--ATSFHVLNRESVREELHMFYESNKSATKSVASLNGKK- 302

Query: 2724 ISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASKRRDSV 2545
              P   L+        L+PQ  +   ES++   H+                    R+D  
Sbjct: 303  --PSSFLRNITVTGADLIPQASHHTTESIEGHTHS--------------------RKDLG 340

Query: 2544 KPGGVSRDRGLKH--QTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIE 2371
            K  G S D+ ++H  +  S  M +   P+GI  N +   SE LS Y RLL+ GRL D ++
Sbjct: 341  KGSGYSSDKEVRHLPKKNSGTMTQFPHPHGIHTNDRDLLSEQLSAYHRLLKDGRLGDSLK 400

Query: 2370 LLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQ 2191
            LL+ MER+GLLDM+KVYHARFF+ C+S+KAV +AF F KLI NPTLST+NML++VCA+SQ
Sbjct: 401  LLEDMERRGLLDMNKVYHARFFEICKSQKAVDKAFRFIKLIPNPTLSTYNMLMTVCASSQ 460

Query: 2190 DSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYG 2011
            DSE  F V RLV+EAG+K DCKLYTTLISTC K+GKV TMF+VFHEMVN GVEPNVHTYG
Sbjct: 461  DSEEAFHVLRLVREAGMKPDCKLYTTLISTCGKSGKVYTMFDVFHEMVNAGVEPNVHTYG 520

Query: 2010 ALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAE 1831
            ALIDGCGRAG+VAKAFGAYGIMRSKKVKPDRV+FNALITACGQSGAVDRAFDVL EM AE
Sbjct: 521  ALIDGCGRAGEVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLGEMMAE 580

Query: 1830 AQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLE 1651
             QPI+PDH TIGALIK C  AGQVDRA EVYKM+H+Y IKG+ EVYTIAVN CSQ GD E
Sbjct: 581  TQPIEPDHTTIGALIKACANAGQVDRAREVYKMVHKYKIKGSSEVYTIAVNCCSQTGDWE 640

Query: 1650 FALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLM 1471
            FA +VY DM R GVVPDEMF SALIDVAGHAGK D AFE+LQ+A++QGIQLG +SYSSLM
Sbjct: 641  FACNVYSDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEILQEARNQGIQLGTVSYSSLM 700

Query: 1470 GACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVC 1291
            GACS AKNWQKALELYE LK  K+  TVST+NAL+T+LCDG+QL KA+++L+EMK  G+ 
Sbjct: 701  GACSNAKNWQKALELYEYLKSTKIEKTVSTVNALITALCDGDQLQKAMEVLSEMKGFGLH 760

Query: 1290 PNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGE 1111
            PN ITYS++L+A EK D+LE G  L SQA+KDGV PNL+MC+C+ G+CL+R  KA S+GE
Sbjct: 761  PNSITYSIILVASEKKDDLEAGHMLLSQAEKDGVAPNLVMCRCIIGMCLRRSEKACSLGE 820

Query: 1110 PVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVE 931
            PVLS    +PQ+D+KW S ALM YR+TI AG          VLGCLQ P+D   +NRL+E
Sbjct: 821  PVLS--RDRPQVDSKWASMALMVYRKTIVAGIMPTVEVISQVLGCLQLPYDASFKNRLIE 878

Query: 930  NLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQI 751
            NLGV++++SR +NL S IDGFGEYDPR+FSLLEEAASLGI+ CVSFK SPI+VDARKLQ+
Sbjct: 879  NLGVTADTSRPSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKASPIVVDARKLQL 938

Query: 750  HTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAM 571
            HTAEV++LT+LKGLKHRLAAGA+LPN++ILLPVEK+QI+S KG +T+++AGRVGQ+V A+
Sbjct: 939  HTAEVFILTVLKGLKHRLAAGAKLPNMSILLPVEKTQIMSPKG-KTINIAGRVGQSVAAL 997

Query: 570  LRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQ 391
            LRRLG+ YQG ES GKI+ISGLA+KRW QPKL    + F GKP E G+S   L K IT+Q
Sbjct: 998  LRRLGIPYQGNESRGKIKISGLAMKRWLQPKL----ASFTGKPGEFGSSQLQLGKGITHQ 1053

Query: 390  QREIRTRNLSLE 355
            QR IRT NLSLE
Sbjct: 1054 QRNIRTGNLSLE 1065


>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 713

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 504/717 (70%), Positives = 597/717 (83%)
 Frame = -1

Query: 2505 QTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDK 2326
            Q   ++M +   PNG  AN   D SE L +Y+RL+R GR++DCI+LL+ MERKGLLDMDK
Sbjct: 2    QDVGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMDK 61

Query: 2325 VYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEA 2146
            VYHARFF  C+S+KA+KEAF F KL+ NPTLSTFNML+SVCA+S+DSEG F+V RLV+EA
Sbjct: 62   VYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEA 121

Query: 2145 GLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKA 1966
            GLKADCKLYTTLI+TCAK+GKVD MFEVFHEMVN G+EPNVHTYGALIDGC +AGQVAKA
Sbjct: 122  GLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA 181

Query: 1965 FGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALI 1786
            FGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+TIGAL+
Sbjct: 182  FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALM 241

Query: 1785 KTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVV 1606
            K C  AGQVDRA EVYKMIH+YNIKGTPEVYTIA+N CSQ GD EFA SVY DM + GV+
Sbjct: 242  KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVI 301

Query: 1605 PDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALEL 1426
            PDE+F SALID AGHAGK + AFE+LQ+AK+QGI +G ISYSSLMGACS AKNWQKALEL
Sbjct: 302  PDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALEL 361

Query: 1425 YEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEK 1246
            YE +K IKL  TVST+NAL+T+LCDG++L K +++L++MK  G+CPN ITYS+LL+ACE+
Sbjct: 362  YEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSILLVACER 421

Query: 1245 NDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNK 1066
             D++E+G  L SQAK+DGV PNL+M KC+ G+C +R+ KA ++ E VLSFNSG+PQI+NK
Sbjct: 422  KDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENK 481

Query: 1065 WTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLY 886
            WTS  LM YRE I AG          VLGCLQ P++  +R RLVENLGVS+++ +R+NL 
Sbjct: 482  WTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLC 541

Query: 885  SFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLK 706
            S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+SP++VDARKL+IHTA+VYLLTILKGL+
Sbjct: 542  SLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEIHTAKVYLLTILKGLR 601

Query: 705  HRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLG 526
            HRLAAGA+LPN+NILLPVEK+QI+S  G++T+ +A R  QA+ A+LRRLGL YQG  S G
Sbjct: 602  HRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPYQGNGSYG 661

Query: 525  KIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            KIRI+GLALKRWFQP   KLAS F GKP EL  S   L K IT+QQR IRT NLSLE
Sbjct: 662  KIRINGLALKRWFQP---KLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSLE 713


>ref|XP_012442077.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 998

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 536/901 (59%), Positives = 672/901 (74%), Gaps = 4/901 (0%)
 Frame = -1

Query: 3048 LSPGMINEVDVLEPESFVIDKPDLLCRGGVEETEIRPKVHNVRSKHALKEESTKIVEGGE 2869
            L P ++ E    +P +F   +  L     V E E       V  K +    S+ +VE   
Sbjct: 108  LQPTVLLESGAGQPFTFATQRSGLHLEERVNEFEADYPRLAVEPKSSA---SSVLVEDAV 164

Query: 2868 LSDELVVGEFQVSSFNGLSKYVREDIYSFCEETQSGRRTLSCLEGASAISPH--CRLQEK 2695
            +    ++GE +V +++   +  RE++++F E      ++ S L     +S H       K
Sbjct: 165  V----LIGEDKVRNYDIFRESGREELHTFYEADHLVAKSSSNLT-LKPVSSHFLSSNSNK 219

Query: 2694 ASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASKRRDSVKPGGVSRDRG 2515
             S   L +  +LN    S KN L   +  + +V  A ++   + KR+   +     RD+G
Sbjct: 220  FSSLKLKLNSELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKG 279

Query: 2514 LKHQTASRD--MHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGL 2341
             KH    +D  + +   PNG +AN K  P EYLS Y+ LLR GRL+D ++LL+ ME+KGL
Sbjct: 280  KKHLIQEKDTKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGL 339

Query: 2340 LDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRR 2161
            LDMDKVYHA+FFK C  +KAVKEAF FTKLI NPTLSTFNML+SVC  S+DSEG F+V R
Sbjct: 340  LDMDKVYHAKFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLR 399

Query: 2160 LVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAG 1981
            LV+EAG +ADC LYTTLISTCAK+GKVDTMFEVFHEMVN+GVEPNV+TYGALIDGC RAG
Sbjct: 400  LVQEAGFQADCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAG 459

Query: 1980 QVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVT 1801
            QV KAFGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE QPIDPDH+T
Sbjct: 460  QVPKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHIT 519

Query: 1800 IGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMK 1621
            +GALIK C+ AGQV+RA EVYKM+H++NI+GTPEVYTIAVN CSQ GD EFA  VY DMK
Sbjct: 520  VGALIKACSNAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMK 579

Query: 1620 RNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQ 1441
            + GV PDE+F SALIDVAGHAGK D AFE+LQ+AK+ GI  G +SYSSLMGACS A+NWQ
Sbjct: 580  KKGVAPDEVFISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQ 639

Query: 1440 KALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLL 1261
            KALELYE++K +KL LTVST+NAL+TSLC+  QL KA+++L+EM+++G+ PN ITYS+LL
Sbjct: 640  KALELYENIKALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILL 699

Query: 1260 MACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKP 1081
            +A E+N +LE+G  L S+A+ DG+ PNL+M +C+ G+CL+RF+KA ++GEPVLSFNSG+P
Sbjct: 700  VASERNGDLEVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRP 759

Query: 1080 QIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSR 901
             I+NKW S AL  YRETI AG          +LGCLQ P D  LR+RLVENL V ++ SR
Sbjct: 760  HIENKWMSVALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSR 819

Query: 900  RANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTI 721
             ++L S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+SPI+VDAR+LQI+TAEVYLLTI
Sbjct: 820  SSSLGSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTI 879

Query: 720  LKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQG 541
            LKGLKHRLAAGA+LP+I+ILLP+EK+QI++  G++++++AGR+GQA+ A+LRR+ L YQG
Sbjct: 880  LKGLKHRLAAGAKLPSISILLPLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQG 939

Query: 540  KESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLS 361
             ES GKIRI+GLAL++WFQP   KLAS F GKP E   S   L K I++QQR IRT NLS
Sbjct: 940  NESYGKIRINGLALRKWFQP---KLASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLS 996

Query: 360  L 358
            L
Sbjct: 997  L 997


>ref|XP_012442072.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763743696|gb|KJB11195.1| hypothetical protein
            B456_001G246900 [Gossypium raimondii]
          Length = 1106

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 536/901 (59%), Positives = 672/901 (74%), Gaps = 4/901 (0%)
 Frame = -1

Query: 3048 LSPGMINEVDVLEPESFVIDKPDLLCRGGVEETEIRPKVHNVRSKHALKEESTKIVEGGE 2869
            L P ++ E    +P +F   +  L     V E E       V  K +    S+ +VE   
Sbjct: 216  LQPTVLLESGAGQPFTFATQRSGLHLEERVNEFEADYPRLAVEPKSSA---SSVLVEDAV 272

Query: 2868 LSDELVVGEFQVSSFNGLSKYVREDIYSFCEETQSGRRTLSCLEGASAISPH--CRLQEK 2695
            +    ++GE +V +++   +  RE++++F E      ++ S L     +S H       K
Sbjct: 273  V----LIGEDKVRNYDIFRESGREELHTFYEADHLVAKSSSNLT-LKPVSSHFLSSNSNK 327

Query: 2694 ASISPLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASKRRDSVKPGGVSRDRG 2515
             S   L +  +LN    S KN L   +  + +V  A ++   + KR+   +     RD+G
Sbjct: 328  FSSLKLKLNSELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKG 387

Query: 2514 LKHQTASRD--MHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGL 2341
             KH    +D  + +   PNG +AN K  P EYLS Y+ LLR GRL+D ++LL+ ME+KGL
Sbjct: 388  KKHLIQEKDTKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGL 447

Query: 2340 LDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRR 2161
            LDMDKVYHA+FFK C  +KAVKEAF FTKLI NPTLSTFNML+SVC  S+DSEG F+V R
Sbjct: 448  LDMDKVYHAKFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLR 507

Query: 2160 LVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAG 1981
            LV+EAG +ADC LYTTLISTCAK+GKVDTMFEVFHEMVN+GVEPNV+TYGALIDGC RAG
Sbjct: 508  LVQEAGFQADCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAG 567

Query: 1980 QVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVT 1801
            QV KAFGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE QPIDPDH+T
Sbjct: 568  QVPKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHIT 627

Query: 1800 IGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMK 1621
            +GALIK C+ AGQV+RA EVYKM+H++NI+GTPEVYTIAVN CSQ GD EFA  VY DMK
Sbjct: 628  VGALIKACSNAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMK 687

Query: 1620 RNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQ 1441
            + GV PDE+F SALIDVAGHAGK D AFE+LQ+AK+ GI  G +SYSSLMGACS A+NWQ
Sbjct: 688  KKGVAPDEVFISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQ 747

Query: 1440 KALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLL 1261
            KALELYE++K +KL LTVST+NAL+TSLC+  QL KA+++L+EM+++G+ PN ITYS+LL
Sbjct: 748  KALELYENIKALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILL 807

Query: 1260 MACEKNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKP 1081
            +A E+N +LE+G  L S+A+ DG+ PNL+M +C+ G+CL+RF+KA ++GEPVLSFNSG+P
Sbjct: 808  VASERNGDLEVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRP 867

Query: 1080 QIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSR 901
             I+NKW S AL  YRETI AG          +LGCLQ P D  LR+RLVENL V ++ SR
Sbjct: 868  HIENKWMSVALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSR 927

Query: 900  RANLYSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTI 721
             ++L S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+SPI+VDAR+LQI+TAEVYLLTI
Sbjct: 928  SSSLGSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTI 987

Query: 720  LKGLKHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQG 541
            LKGLKHRLAAGA+LP+I+ILLP+EK+QI++  G++++++AGR+GQA+ A+LRR+ L YQG
Sbjct: 988  LKGLKHRLAAGAKLPSISILLPLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQG 1047

Query: 540  KESLGKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLS 361
             ES GKIRI+GLAL++WFQP   KLAS F GKP E   S   L K I++QQR IRT NLS
Sbjct: 1048 NESYGKIRINGLALRKWFQP---KLASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLS 1104

Query: 360  L 358
            L
Sbjct: 1105 L 1105


>gb|KDO42798.1| hypothetical protein CISIN_1g005129mg [Citrus sinensis]
            gi|641823386|gb|KDO42799.1| hypothetical protein
            CISIN_1g005129mg [Citrus sinensis]
            gi|641823387|gb|KDO42800.1| hypothetical protein
            CISIN_1g005129mg [Citrus sinensis]
          Length = 713

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 504/717 (70%), Positives = 597/717 (83%)
 Frame = -1

Query: 2505 QTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDK 2326
            Q   ++M +   PNG  AN   D SE L +Y+RL+R GR+++CI+LL+ MERKGLLDMDK
Sbjct: 2    QDGGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDK 61

Query: 2325 VYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEA 2146
            VYHARFF  C+S+KA+KEAF F KL+ NPTLSTFNML+SVCA+S+DSEG F+V RLV+EA
Sbjct: 62   VYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEA 121

Query: 2145 GLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKA 1966
            GLKADCKLYTTLI+TCAK+GKVD MFEVFHEMVN G+EPNVHTYGALIDGC +AGQVAKA
Sbjct: 122  GLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA 181

Query: 1965 FGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALI 1786
            FGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+TIGAL+
Sbjct: 182  FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALM 241

Query: 1785 KTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVV 1606
            K C  AGQVDRA EVYKMIH+YNIKGTPEVYTIA+N CSQ GD EFA SVY DM + GV+
Sbjct: 242  KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVI 301

Query: 1605 PDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALEL 1426
            PDE+F SALID AGHAGK + AFE+LQ+AK+QGI +G ISYSSLMGACS AKNWQKALEL
Sbjct: 302  PDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALEL 361

Query: 1425 YEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEK 1246
            YE +K IKL  TVST+NAL+T+LCDG+QL K +++L++MK  G+CPN ITYS+LL+ACE+
Sbjct: 362  YEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACER 421

Query: 1245 NDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNK 1066
             D++E+G  L SQAK+DGV PNL+M KC+ G+C +R+ KA ++ E VLSFNSG+PQI+NK
Sbjct: 422  KDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENK 481

Query: 1065 WTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLY 886
            WTS ALM YRE I AG          VLGCLQ P++  +R RLVENLGVS+++ +R+NL 
Sbjct: 482  WTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLC 541

Query: 885  SFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLK 706
            S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+ P++VDARKL+IHTA+VYLLTILKGL+
Sbjct: 542  SLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAKVYLLTILKGLR 601

Query: 705  HRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLG 526
            HRLAAGA+LPN+NILLPVEK+QI+S  G++T+ +A R  QA+ A+LRRLGL YQG  S G
Sbjct: 602  HRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPYQGNGSYG 661

Query: 525  KIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            KIRI+GLALKRWFQP   KLAS F GKP EL  S   L K IT+QQR IRT NLSLE
Sbjct: 662  KIRINGLALKRWFQP---KLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSLE 713


>ref|XP_012442074.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Gossypium raimondii]
          Length = 1073

 Score = 1015 bits (2625), Expect = 0.0
 Identities = 522/837 (62%), Positives = 650/837 (77%), Gaps = 4/837 (0%)
 Frame = -1

Query: 2856 LVVGEFQVSSFNGLSKYVREDIYSFCEETQSGRRTLSCLEGASAISPH--CRLQEKASIS 2683
            +++GE +V +++   +  RE++++F E      ++ S L     +S H       K S  
Sbjct: 240  VLIGEDKVRNYDIFRESGREELHTFYEADHLVAKSSSNLT-LKPVSSHFLSSNSNKFSSL 298

Query: 2682 PLLMPQKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASKRRDSVKPGGVSRDRGLKHQ 2503
             L +  +LN    S KN L   +  + +V  A ++   + KR+   +     RD+G KH 
Sbjct: 299  KLKLNSELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKGKKHL 358

Query: 2502 TASRD--MHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMD 2329
               +D  + +   PNG +AN K  P EYLS Y+ LLR GRL+D ++LL+ ME+KGLLDMD
Sbjct: 359  IQEKDTKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGLLDMD 418

Query: 2328 KVYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKE 2149
            KVYHA+FFK C  +KAVKEAF FTKLI NPTLSTFNML+SVC  S+DSEG F+V RLV+E
Sbjct: 419  KVYHAKFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQE 478

Query: 2148 AGLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAK 1969
            AG +ADC LYTTLISTCAK+GKVDTMFEVFHEMVN+GVEPNV+TYGALIDGC RAGQV K
Sbjct: 479  AGFQADCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPK 538

Query: 1968 AFGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGAL 1789
            AFGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE QPIDPDH+T+GAL
Sbjct: 539  AFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGAL 598

Query: 1788 IKTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGV 1609
            IK C+ AGQV+RA EVYKM+H++NI+GTPEVYTIAVN CSQ GD EFA  VY DMK+ GV
Sbjct: 599  IKACSNAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGV 658

Query: 1608 VPDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALE 1429
             PDE+F SALIDVAGHAGK D AFE+LQ+AK+ GI  G +SYSSLMGACS A+NWQKALE
Sbjct: 659  APDEVFISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALE 718

Query: 1428 LYEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACE 1249
            LYE++K +KL LTVST+NAL+TSLC+  QL KA+++L+EM+++G+ PN ITYS+LL+A E
Sbjct: 719  LYENIKALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASE 778

Query: 1248 KNDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDN 1069
            +N +LE+G  L S+A+ DG+ PNL+M +C+ G+CL+RF+KA ++GEPVLSFNSG+P I+N
Sbjct: 779  RNGDLEVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIEN 838

Query: 1068 KWTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANL 889
            KW S AL  YRETI AG          +LGCLQ P D  LR+RLVENL V ++ SR ++L
Sbjct: 839  KWMSVALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSL 898

Query: 888  YSFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGL 709
             S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+SPI+VDAR+LQI+TAEVYLLTILKGL
Sbjct: 899  GSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGL 958

Query: 708  KHRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESL 529
            KHRLAAGA+LP+I+ILLP+EK+QI++  G++++++AGR+GQA+ A+LRR+ L YQG ES 
Sbjct: 959  KHRLAAGAKLPSISILLPLEKAQILTSGGEKSINVAGRMGQAIAALLRRIKLPYQGNESY 1018

Query: 528  GKIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSL 358
            GKIRI+GLAL++WFQP   KLAS F GKP E   S   L K I++QQR IRT NLSL
Sbjct: 1019 GKIRINGLALRKWFQP---KLASPFTGKPGEWNASQMRLGKGISHQQRNIRTGNLSL 1072


>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
            gi|557525497|gb|ESR36803.1| hypothetical protein
            CICLE_v10027915mg [Citrus clementina]
          Length = 713

 Score = 1015 bits (2625), Expect = 0.0
 Identities = 504/717 (70%), Positives = 596/717 (83%)
 Frame = -1

Query: 2505 QTASRDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDK 2326
            Q   ++M +   PNG  AN   D SE L +Y+RL+R GR+++CI+LL+ MERKGLLDMDK
Sbjct: 2    QDGGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDK 61

Query: 2325 VYHARFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEA 2146
            VYHARFF  C+S+KA+KEAFCF KL+ NPTLSTFNML+SVCA+S+DSEG F+V RLV+EA
Sbjct: 62   VYHARFFNVCKSQKAIKEAFCFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEA 121

Query: 2145 GLKADCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKA 1966
            GLKADCKLYTTLI+TCAK+GKVD MFEVFHEMVN G+EPNVHTYGALIDGC +AGQVAKA
Sbjct: 122  GLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA 181

Query: 1965 FGAYGIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALI 1786
            FGAYGIMRSK VKPDRV+FNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+TIGAL+
Sbjct: 182  FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALM 241

Query: 1785 KTCTQAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVV 1606
            K C  AGQVDRA EVYKMIH+YNIKGTPEVYTIA+N CSQ GD EFA SVY DM + GV+
Sbjct: 242  KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVI 301

Query: 1605 PDEMFFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALEL 1426
            PDE+F SALID AGHAGK + AFE+LQ+AK+QGI +G ISYSSLMGACS AKNWQKALEL
Sbjct: 302  PDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALEL 361

Query: 1425 YEDLKVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEK 1246
            YE +K IKL  TVST+NAL+T+LCDG+QL K +++L++MK  G+CPN ITYS+LL+ACE+
Sbjct: 362  YEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACER 421

Query: 1245 NDELELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNK 1066
             D++E+G  L SQAK+DGV PNL+M KC+ G+C +R+ KA ++ E VLSFNSG+PQI+NK
Sbjct: 422  KDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENK 481

Query: 1065 WTSWALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLY 886
            WTS ALM YRE I AG          VLGCLQ P++  +R RLVENLGVS+++ +R+NL 
Sbjct: 482  WTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLC 541

Query: 885  SFIDGFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLK 706
            S IDGFGEYDPR+FSLLEEAAS GI+ CVSFK+ P++VDARKL+IHTA+VYLLTILKGL+
Sbjct: 542  SLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAKVYLLTILKGLR 601

Query: 705  HRLAAGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLG 526
            HRLAAGA+LPN+NILLPVEK+QI S  G++T+ +A R  QA+ A+LRRLGL  QG  S G
Sbjct: 602  HRLAAGAKLPNVNILLPVEKTQIKSVGGEKTIDIAERTTQAIAALLRRLGLPNQGNGSYG 661

Query: 525  KIRISGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            KIRI+GLALKRWFQP   KLAS F GKP EL  S   L K IT+QQR IRT NLSLE
Sbjct: 662  KIRINGLALKRWFQP---KLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSLE 713


>ref|XP_011037244.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 1109

 Score = 1015 bits (2624), Expect = 0.0
 Identities = 537/872 (61%), Positives = 652/872 (74%), Gaps = 6/872 (0%)
 Frame = -1

Query: 2952 TEIRPKVHNVRSKHALKEESTKIVEGGELSDELVVGEFQVSSFNG-LSKYVREDIYSFCE 2776
            +E+   V  V+S   L     + ++  ELS+           +NG +S+ VRED+Y+F  
Sbjct: 257  SELSESVEKVKSNAVLVPVDNESIDKAELSN-----------YNGAISQSVREDLYTFYG 305

Query: 2775 ETQSGRRTLSCLEGASAISPHCRLQEKASISPLLMPQKLNGAEESLKNLLHATEYFKERV 2596
              +S  ++ S L G    S H  L +    S L M   L   + S +  L A ++ ++ +
Sbjct: 306  ANRSVVKSASNL-GLKETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKIM 364

Query: 2595 PVAFYKDLSASKRRDSVKPGGVSRDRGLKHQTASRDMHRSLQPNGIIANGKSDPSEYLST 2416
            P+A  +  S  K ++  +    SR+R    Q +   + +   PNGI +  K  PSE  + 
Sbjct: 365  PLAHNEGGSFHKSKNLPR----SRERKHPIQDSHSKLRQLPSPNGIPSKVKDHPSEDYNA 420

Query: 2415 YSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHARFFKACRSKKAVKEAFCFTKLIKNPT 2236
            Y+RLLR GRL +C++LL+ MER+GLLDM+KVYH +FFK CRS+KAVKEAF F KL++NPT
Sbjct: 421  YNRLLREGRLAECLDLLEDMERRGLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPT 480

Query: 2235 LSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKADCKLYTTLISTCAKNGKVDTMFEVFH 2056
            LSTFNML+SVCA+SQ+S G FEV +L K  GLKADCKLYTTLISTCAK+GKVD MFEVFH
Sbjct: 481  LSTFNMLMSVCASSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFH 540

Query: 2055 EMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVKPDRVIFNALITACGQSG 1876
            EMVN GVEPNVHTYGALIDGC RAGQVAKAFGAYGIMRSK VKPDRV+FNALITACGQSG
Sbjct: 541  EMVNAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 600

Query: 1875 AVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCTQAGQVDRACEVYKMIHQYNIKGTPEV 1696
            AVDRAFDVLAEM  EAQPIDPDH+T+GALIK CT AGQVDRA EVY M+H+YNIKGTPEV
Sbjct: 601  AVDRAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEV 660

Query: 1695 YTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEMFFSALIDVAGHAGKADVAFEVLQDAK 1516
            YTIA+NS SQ+GD EFA  VY DM R GVVPDEMF SALIDVAGHAGK D AFE++Q+AK
Sbjct: 661  YTIAINSSSQIGDWEFACKVYDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAK 720

Query: 1515 SQGIQLGNISYSSLMGACSKAKNWQKALELYEDLKVIKLLLTVSTLNALMTSLCDGEQLY 1336
            ++G QLG I YSSLMGAC  AKNWQK LELYED+K +KL  TV+TLNAL+T+LCDG+QL 
Sbjct: 721  AKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKLKPTVATLNALITALCDGDQLS 780

Query: 1335 KAVDILAEMKKAGVCPNDITYSVLLMACEKNDELELGFELFSQAKKDGVFPNLIMCKCLT 1156
            KA+++L+EMK  G+ PN ITYS+L +A E+ D+LE G  L SQAKKD V P LIM KC+ 
Sbjct: 781  KALEVLSEMKVWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIMVKCII 840

Query: 1155 GLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSWALMFYRETIAAGXXXXXXXXXXVLGC 976
             +CL++F  A ++GEPVLSFNSG+ QI+NKWTS ALM YR TIAAG          VLGC
Sbjct: 841  SMCLRKFENACTLGEPVLSFNSGRAQIENKWTSVALMAYRGTIAAGEKPTIELVSQVLGC 900

Query: 975  LQFPHDTPLRNRLVENLGVSSNSSRRANLYSFIDGFGEYDPRSFSLLE-----EAASLGI 811
            LQ P D  L+NRLVENLGV++  SR +NL S +DGFGEYDPR+FSLLE     EAASLGI
Sbjct: 901  LQIPCDATLKNRLVENLGVTAVPSRYSNLCSLVDGFGEYDPRAFSLLEICHLQEAASLGI 960

Query: 810  IQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLAAGARLPNINILLPVEKSQIIS 631
            + CVSFK+SPI +DA++LQIH AEVY LTILKGLKHRLAAGA+LPNI ILLPVEK+Q I+
Sbjct: 961  VPCVSFKESPITMDAKQLQIHIAEVYFLTILKGLKHRLAAGAKLPNITILLPVEKAQAIT 1020

Query: 630  HKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRISGLALKRWFQPKLTKLASQFG 451
             +G++T+++AGR+ QAV ++LRRLGL YQG ES GKIRI+G++L+RW QPKL    S F 
Sbjct: 1021 LEGEKTINVAGRISQAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLD---SPFS 1077

Query: 450  GKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            GKP E  TS + L K I+ QQR IRT + SLE
Sbjct: 1078 GKPGEWSTSLSRLGKGISFQQRNIRTGDFSLE 1109


>ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Jatropha curcas]
            gi|643715661|gb|KDP27602.1| hypothetical protein
            JCGZ_19607 [Jatropha curcas]
          Length = 1112

 Score = 1012 bits (2617), Expect = 0.0
 Identities = 515/833 (61%), Positives = 641/833 (76%), Gaps = 3/833 (0%)
 Frame = -1

Query: 2844 EFQVSSFNGLSKY-VREDIYSFCEETQSGRRTLSCLEGASAISPHCRLQEKASISPLLMP 2668
            +  +SS++G+ K   RED+Y F +++QS  ++   L G++++S H       S S   + 
Sbjct: 283  KIDLSSYHGIIKESAREDLYMFYDKSQSVVKSPLNLNGSNSVSSHASPSIGNSFSSFKVN 342

Query: 2667 QKLNGAEESLKNLLHATEYFKERVPVAFYKDLSASKRRDSVKPGG--VSRDRGLKHQTAS 2494
              +  A+ S +      E   ++V +A Y   S+ K  ++ +  G    +++G   Q   
Sbjct: 343  GIVKEADSSAQQSPKIAESVDKKVRLAHYVRESSRKNENTRRRRGFPTEKEKGRPVQNNQ 402

Query: 2493 RDMHRSLQPNGIIANGKSDPSEYLSTYSRLLRAGRLTDCIELLQSMERKGLLDMDKVYHA 2314
              +     PNG+    K  PS+ +  Y+RLLR GRLT+C+ LL+ MER+GLLDM+K+YHA
Sbjct: 403  IKLPEFPYPNGVHVIDKDHPSQQVHAYNRLLRDGRLTECVSLLEDMERRGLLDMNKIYHA 462

Query: 2313 RFFKACRSKKAVKEAFCFTKLIKNPTLSTFNMLLSVCATSQDSEGPFEVRRLVKEAGLKA 2134
            +FFK C+ +KAV EAF F KL+ NPTLST+NML+SVCA+SQDS G F+V +L + +GLKA
Sbjct: 463  KFFKICKIQKAVNEAFRFCKLVPNPTLSTYNMLMSVCASSQDSSGAFQVLQLARGSGLKA 522

Query: 2133 DCKLYTTLISTCAKNGKVDTMFEVFHEMVNTGVEPNVHTYGALIDGCGRAGQVAKAFGAY 1954
            DC+LYTTLISTCAK+GKVDTMFEVFH+MVN GVEPNVHTYGALIDGC RAGQ+AKAFGAY
Sbjct: 523  DCRLYTTLISTCAKSGKVDTMFEVFHKMVNAGVEPNVHTYGALIDGCARAGQLAKAFGAY 582

Query: 1953 GIMRSKKVKPDRVIFNALITACGQSGAVDRAFDVLAEMRAEAQPIDPDHVTIGALIKTCT 1774
            GIM SKKVKPDRV+FNALI ACGQSGAVDRAFDVLAEMRAE QPIDPDH+T+GALI  C 
Sbjct: 583  GIMSSKKVKPDRVVFNALINACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALINACA 642

Query: 1773 QAGQVDRACEVYKMIHQYNIKGTPEVYTIAVNSCSQVGDLEFALSVYGDMKRNGVVPDEM 1594
            +AGQ++RA EVY M+H++NIKGTPEVYTIAVN CSQ GD EFA SVY DMKR  V PDEM
Sbjct: 643  KAGQINRAKEVYNMMHEFNIKGTPEVYTIAVNCCSQTGDWEFARSVYDDMKRKDVAPDEM 702

Query: 1593 FFSALIDVAGHAGKADVAFEVLQDAKSQGIQLGNISYSSLMGACSKAKNWQKALELYEDL 1414
            F SALIDVAGHAGK DVAFE+LQ+A+ QG+QLG I YSSLMGACS AKNWQKALELYED+
Sbjct: 703  FLSALIDVAGHAGKVDVAFEILQEARIQGMQLGIIPYSSLMGACSNAKNWQKALELYEDI 762

Query: 1413 KVIKLLLTVSTLNALMTSLCDGEQLYKAVDILAEMKKAGVCPNDITYSVLLMACEKNDEL 1234
            K IK+  TV TLNAL+T+LCDG+QL KA+++++EMK   +CPN +TYS+L +A E+ D+L
Sbjct: 763  KSIKVNPTVPTLNALITALCDGDQLPKAIEVMSEMKSFRLCPNTVTYSILFVASERKDDL 822

Query: 1233 ELGFELFSQAKKDGVFPNLIMCKCLTGLCLQRFLKAASIGEPVLSFNSGKPQIDNKWTSW 1054
            E+G  L SQAK+D + P LIM KC+ G+CL+R+ K  ++GEPVLSF+SG+PQ+ N+WTS 
Sbjct: 823  EVGLRLLSQAKEDCIAPTLIMYKCIIGMCLRRYEKVCALGEPVLSFDSGRPQMKNEWTSL 882

Query: 1053 ALMFYRETIAAGXXXXXXXXXXVLGCLQFPHDTPLRNRLVENLGVSSNSSRRANLYSFID 874
            ALM YRETIAAG          VLGCLQ P D  L++RLVENLGV+++SS+ +NL S +D
Sbjct: 883  ALMVYRETIAAGEKLTMEVVSQVLGCLQLPFDASLKHRLVENLGVTTDSSKVSNLCSLVD 942

Query: 873  GFGEYDPRSFSLLEEAASLGIIQCVSFKQSPIIVDARKLQIHTAEVYLLTILKGLKHRLA 694
            GFGEYDPR+FSLLEEAASLGII CVSFK+SPIIVDA+ LQ H A+VYLLTILKGLKHRLA
Sbjct: 943  GFGEYDPRAFSLLEEAASLGIIPCVSFKESPIIVDAKALQSHVAQVYLLTILKGLKHRLA 1002

Query: 693  AGARLPNINILLPVEKSQIISHKGDRTVHLAGRVGQAVGAMLRRLGLRYQGKESLGKIRI 514
            AGARLPNI ILLP E +Q+   +G++T+++A RV Q V A+LRRL L YQG ES GKIRI
Sbjct: 1003 AGARLPNITILLPTETAQVKVPEGEKTINIAARVSQDVAALLRRLRLHYQGNESYGKIRI 1062

Query: 513  SGLALKRWFQPKLTKLASQFGGKPAELGTSPTHLHKEITNQQREIRTRNLSLE 355
            +G++LKRWFQP   KLA  F GKP EL +S   + K+I++QQR IRT NLSLE
Sbjct: 1063 NGISLKRWFQP---KLAYPFSGKPEELNSSLLRIGKDISHQQRNIRTGNLSLE 1112