BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00000111
         (4530 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1054   0.0  
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1041   0.0  
ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1036   0.0  
ref|XP_010932029.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...  1024   0.0  
ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1006   0.0  
ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1000   0.0  
ref|XP_006841548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   994   0.0  
ref|XP_009383719.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   989   0.0  
ref|XP_011039072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   984   0.0  
ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   982   0.0  
ref|XP_008450498.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   976   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   976   0.0  
ref|XP_010546798.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   974   0.0  
ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   972   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   971   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   970   0.0  
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   970   0.0  
ref|XP_010551750.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   968   0.0  
ref|XP_010094933.1| DEAD-box ATP-dependent RNA helicase 3 [Morus...   961   0.0  
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   959   0.0  

>ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Nelumbo nucifera]
          Length = 761

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 553/698 (79%), Positives = 596/698 (85%), Gaps = 13/698 (1%)
 Frame = -2

Query: 2402 PCAIATPNSVLSEEAFKGL--GLSK-----DDADDDYASETGREAAS--SEDNLAVSDLG 2250
            P AI TPNSVLSEEAFKG+  GLSK      D D  Y SET    A   +E +LA+++L 
Sbjct: 64   PSAIFTPNSVLSEEAFKGISSGLSKRSIEEKDNDVKYDSETDGSGAEEGAEGDLAIANLD 123

Query: 2249 LPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKRLTVDD 2070
            LPQQLVD+L KRGI +LFPIQRAVL+PALEGRD+IARAKTGTGKTLAFGIPIIKR+TVDD
Sbjct: 124  LPQQLVDSLAKRGITHLFPIQRAVLLPALEGRDLIARAKTGTGKTLAFGIPIIKRITVDD 183

Query: 2069 EGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQNALSRG 1890
            EGR+LSRR+G LPR+LVLAPTRELAKQVEKEIKESAPYL+TVCVYGGVSYN QQNALSRG
Sbjct: 184  EGRSLSRRSGCLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNSQQNALSRG 243

Query: 1889 VDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQSML 1710
            VDVVVGTPGRIIDLINS SL LGEVQYLVLDEADQMLAVGFEEDVE+IL+KLPSERQSML
Sbjct: 244  VDVVVGTPGRIIDLINSNSLKLGEVQYLVLDEADQMLAVGFEEDVEIILQKLPSERQSML 303

Query: 1709 FSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTILSDLITVY 1530
            FSATMPGWVKKL+RKYL NPLTIDLVGDQ+EKLAEGIKLYAIPTTATSKRTIL+DLITVY
Sbjct: 304  FSATMPGWVKKLARKYLHNPLTIDLVGDQDEKLAEGIKLYAIPTTATSKRTILTDLITVY 363

Query: 1529 AKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATD 1350
            AKG KTIVFTQTKRDADEVSMAL+NS+ASEALHGDISQHQRERTLNGFRQGKFTVLVATD
Sbjct: 364  AKGGKTIVFTQTKRDADEVSMALTNSVASEALHGDISQHQRERTLNGFRQGKFTVLVATD 423

Query: 1349 VAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVKSLERD 1170
            VAARGLDIPNVDL+IHYE+PNDPETFVHRSGRTGRAGKEG AILMFTSSQRRTV+SLERD
Sbjct: 424  VAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGAAILMFTSSQRRTVRSLERD 483

Query: 1169 VGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDALAAALA 990
            VGCRFEFISPP I EVLESSA QVVATL GVHP+SI++FVPTAQRLIEEQGTDALAAALA
Sbjct: 484  VGCRFEFISPPSIGEVLESSAAQVVATLNGVHPQSIQFFVPTAQRLIEEQGTDALAAALA 543

Query: 989  HLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAADEIGKI 810
            HLSGFSQPPSSRSLINHEQGWVTLQLTR+P YSRG+ SARSV GFLSDV+P AADE+GKI
Sbjct: 544  HLSGFSQPPSSRSLINHEQGWVTLQLTRDPNYSRGYLSARSVTGFLSDVFPAAADEVGKI 603

Query: 809  HLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDNY----XXX 642
            +L+ADE VQGAVFDLPE+ A ELLN+QTPPGNTI+KITKLPALQDDGP  DNY       
Sbjct: 604  YLVADERVQGAVFDLPEETASELLNKQTPPGNTITKITKLPALQDDGPPGDNYGRFSNRE 663

Query: 641  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXXXXWLIGNR 462
                                                SY+T+             WLIG++
Sbjct: 664  RGSRGGSRERGGFRGSRGWGSGRDSDDEDGFRRGGWSYKTDNNRSRRSRSSGDDWLIGSK 723

Query: 461  RSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNKQDY 348
            RSNR SSFG+RDRSFGG+CFNCGRSGHRASECPNKQDY
Sbjct: 724  RSNRSSSFGSRDRSFGGACFNCGRSGHRASECPNKQDY 761



 Score =  145 bits (366), Expect = 3e-31
 Identities = 107/328 (32%), Positives = 170/328 (51%), Gaps = 5/328 (1%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRR---PRAVVLCPTRELCE 3406
            LE + ++  + TG+GKTLA+ +PI++ +  D+   G  +  R    PR +VL PTREL +
Sbjct: 152  LEGRDLIARAKTGTGKTLAFGIPIIKRITVDD--EGRSLSRRSGCLPRVLVLAPTRELAK 209

Query: 3407 QVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYG 3583
            QV    K I   A + +T+ V GG     Q+++L+  +D+VVGTPGR++  I   ++  G
Sbjct: 210  QV---EKEIKESAPYLNTVCVYGGVSYNSQQNALSRGVDVVVGTPGRIIDLINSNSLKLG 266

Query: 3584 DIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDE 3763
            +++YLVLDEAD M   GF  D+   L  L      P ++  Q++L +ATM   V+ L  +
Sbjct: 267  EVQYLVLDEADQMLAVGFEEDVEIILQKL------PSER--QSMLFSATMPGWVKKLARK 318

Query: 3764 EFQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNS 3943
                   +       +        + I        ++L  L    AKG + +VF  T   
Sbjct: 319  YLHNPLTIDLVGDQDEKLAEGIKLYAIPTTATSKRTILTDLITVYAKGGKTIVFTQTKRD 378

Query: 3944 SRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVD 4120
            +  V   L+ N + +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD
Sbjct: 379  ADEVSMALT-NSVASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVD 435

Query: 4121 HVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
             VI ++ P +   ++HR+GRT R G +G
Sbjct: 436  LVIHYELPNDPETFVHRSGRTGRAGKEG 463


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score = 1041 bits (2692), Expect = 0.0
 Identities = 570/780 (73%), Positives = 613/780 (78%), Gaps = 17/780 (2%)
 Frame = -2

Query: 2636 MSSIIAGISSFHHQSPSPTPCLELSKRTXXXXXXXXXXLQKFPXXXXXXXXLKPCKFRGF 2457
            M+S I G+SS +      T  LELS+RT           +                F+  
Sbjct: 1    MASSIIGVSSVYQ-----TTALELSRRTSAHSLSLPFSDKTHLGV-----------FKAP 44

Query: 2456 GHPFPFSSSLRISFSR---HCPCAIATPNSVLSEEAFKGLG-LSKD-----DADDDYASE 2304
                   +SLR SF +     P AIATPNSVLSEEAFKGLG  SKD     D DDDY  E
Sbjct: 45   NTRVLSDASLRRSFKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPE 104

Query: 2303 TGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGT 2124
                AA+ ED LA++ LGLP +LV++L++RGI +LFPIQRAVL+PALEGRD+IARAKTGT
Sbjct: 105  IEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGT 164

Query: 2123 GKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTV 1944
            GKTLAFGIPIIKRL+ DDE R   RR+GRLPR+LVLAPTRELAKQVEKEIKESAPYLSTV
Sbjct: 165  GKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTV 224

Query: 1943 CVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFE 1764
            CVYGGVSY  QQNALSRGVDVVVGTPGRIIDLI   SL LGEVQ LVLDEADQMLAVGFE
Sbjct: 225  CVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFE 284

Query: 1763 EDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAI 1584
            EDVEVILEKLPSERQSMLFSATMP WVKKL+RKYLDNPLTIDLVGD +EKLAEGIKLYAI
Sbjct: 285  EDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAI 344

Query: 1583 PTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRE 1404
            PTTATSKRTILSDLITVYAKG KTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRE
Sbjct: 345  PTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRE 404

Query: 1403 RTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVA 1224
            RTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTGRAGKEG A
Sbjct: 405  RTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTA 464

Query: 1223 ILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPT 1044
            ILMFTSSQRRTVKSLERDVGC+FEFISPP IEEVLESSAEQVVATL GVHPES+E+F PT
Sbjct: 465  ILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPT 524

Query: 1043 AQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSV 864
            AQ+LIEE+GT ALAAALAHLSGFSQPPS RSLI+HEQGWVTLQLTR+ GYSRGF SARSV
Sbjct: 525  AQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSV 584

Query: 863  MGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPA 684
             GFLSDVYP AADE+GKI+L+ADE VQGAVFDLPE+IAKELLN+Q PPGNTISKITKLPA
Sbjct: 585  TGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITKLPA 644

Query: 683  LQDDGPASDNY-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYR 525
            LQDDGPA D Y                                              S+R
Sbjct: 645  LQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGGDDLNRRGGRSFR 704

Query: 524  TEXXXXXXXXXXXXXWLIGNRRSNR-PSSFGNRDRSFGGSCFNCGRSGHRASECPNKQDY 348
            +              WLIG RRSNR  SSFG+R+RSFGGSCF CGRSGHRASECPNK+DY
Sbjct: 705  SNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPNKRDY 764



 Score =  152 bits (383), Expect = 3e-33
 Identities = 112/335 (33%), Positives = 172/335 (51%), Gaps = 3/335 (0%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHD-ELLYGMLMKPRRPRAVVLC 3385
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  D E         R PR +VL 
Sbjct: 142  IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLA 201

Query: 3386 PTRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIK 3562
            PTREL +QV    K I   A + ST+ V GG     Q+++L+  +D+VVGTPGR++  IK
Sbjct: 202  PTRELAKQV---EKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIK 258

Query: 3563 DGNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKA 3742
              ++  G+++ LVLDEAD M   GF  D+   L  L      P ++  Q++L +ATM   
Sbjct: 259  GNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKL------PSER--QSMLFSATMPAW 310

Query: 3743 VQMLIDEEFQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMV 3922
            V+ L  +       +     H +        + I        ++L  L    AKG + +V
Sbjct: 311  VKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIV 370

Query: 3923 FCNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARG 4102
            F  T   +  V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARG
Sbjct: 371  FTQTKRDADEVSMALT-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARG 427

Query: 4103 LDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            LD+ +VD +I ++ P +   ++HR+GRT R G +G
Sbjct: 428  LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG 462


>ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 754

 Score = 1036 bits (2679), Expect = 0.0
 Identities = 550/724 (75%), Positives = 599/724 (82%), Gaps = 22/724 (3%)
 Frame = -2

Query: 2462 GFGHPFPFSSSLRISFSRH---CPCAIATPNSVLSEEAFKGL-GLSKDDAD--------- 2322
            GF  P   SS L++  +      P A+A+PNSVLSEEAFKG  GLSK   +         
Sbjct: 31   GFDKPRSSSSLLKVCGAARRLFVPSAVASPNSVLSEEAFKGFRGLSKSPLEQGEEEEYGS 90

Query: 2321 DDYASETGREAASS------EDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALE 2160
            D Y SE   E +SS      +D LA+++L LPQQLV +L+KRGI +LFPIQRAVL+PALE
Sbjct: 91   DAYNSEEEEEGSSSAAAGQDKDELAITNLDLPQQLVSSLEKRGITHLFPIQRAVLLPALE 150

Query: 2159 GRDIIARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEK 1980
            G+DIIARAKTGTGKTLAFGIPIIKRL+  DEGR  SR+ GRLPR LVLAPTRELA+QVEK
Sbjct: 151  GQDIIARAKTGTGKTLAFGIPIIKRLSEGDEGRRKSRQLGRLPRALVLAPTRELARQVEK 210

Query: 1979 EIKESAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVL 1800
            EIKESAPYLSTVCVYGGVSYN+Q+NALSRGVDVVVGTPGRIIDLIN  SL LGEVQ+LVL
Sbjct: 211  EIKESAPYLSTVCVYGGVSYNIQKNALSRGVDVVVGTPGRIIDLINDNSLRLGEVQFLVL 270

Query: 1799 DEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQE 1620
            DEADQMLAVGFEEDVEVILEKLPSERQ+MLFSATMPGWVKKL+R+ L++PLTIDLVGDQ+
Sbjct: 271  DEADQMLAVGFEEDVEVILEKLPSERQNMLFSATMPGWVKKLARRNLNDPLTIDLVGDQD 330

Query: 1619 EKLAEGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASE 1440
            EKLAEGIKLYAIPTTATSKRTILSDL+TVYAKG K IVFTQTKRDADEVSMAL+NSIASE
Sbjct: 331  EKLAEGIKLYAIPTTATSKRTILSDLVTVYAKGGKAIVFTQTKRDADEVSMALTNSIASE 390

Query: 1439 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRS 1260
            ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRS
Sbjct: 391  ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 450

Query: 1259 GRTGRAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKG 1080
            GRTGRAGKEG AILMFTSSQRRTVKSLERDVGCRFEFISPPQ++E+LESSAEQVVATL+G
Sbjct: 451  GRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCRFEFISPPQMQEILESSAEQVVATLQG 510

Query: 1079 VHPESIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREP 900
            VHPESIEYF+PTAQRL +EQGT ALAAALAHLSGFS+PPSSRSLINHEQGWVTLQLTREP
Sbjct: 511  VHPESIEYFLPTAQRLTDEQGTQALAAALAHLSGFSRPPSSRSLINHEQGWVTLQLTREP 570

Query: 899  GYSRGFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPP 720
            GYSRGFFSARSV GFLSDV P AADE+GKI+LIADE +QGAVFDLPEDIAKELLN+Q PP
Sbjct: 571  GYSRGFFSARSVTGFLSDVVPAAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 630

Query: 719  GNTISKITKLPALQDDGPASDNY---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 549
            GN+ISKITKLP LQDDGP++DNY                                     
Sbjct: 631  GNSISKITKLPTLQDDGPSTDNYGRFSNRERGYRGGSSRDRNQRGFRSWGARDSNSDDGF 690

Query: 548  XXXXXSYRTEXXXXXXXXXXXXXWLIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASE 369
                   RT+             WLIG RRS+R SS+GNRDRSFGG+CFNCGRSGHRASE
Sbjct: 691  RRGGRVSRTDNSWSRSPRGSEDDWLIGGRRSSRSSSYGNRDRSFGGTCFNCGRSGHRASE 750

Query: 368  CPNK 357
            CPNK
Sbjct: 751  CPNK 754



 Score =  149 bits (377), Expect = 2e-32
 Identities = 110/326 (33%), Positives = 167/326 (51%), Gaps = 3/326 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRH-DELLYGMLMKPRRPRAVVLCPTRELCEQV 3412
            LE + ++  + TG+GKTLA+ +PI++ L   DE         R PRA+VL PTREL  QV
Sbjct: 149  LEGQDIIARAKTGTGKTLAFGIPIIKRLSEGDEGRRKSRQLGRLPRALVLAPTRELARQV 208

Query: 3413 FRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDI 3589
                K I   A + ST+ V GG     Q+++L+  +D+VVGTPGR++  I D ++  G++
Sbjct: 209  ---EKEIKESAPYLSTVCVYGGVSYNIQKNALSRGVDVVVGTPGRIIDLINDNSLRLGEV 265

Query: 3590 KYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEF 3769
            ++LVLDEAD M   GF  D+   L  L      P ++  Q +L +ATM   V+ L     
Sbjct: 266  QFLVLDEADQMLAVGFEEDVEVILEKL------PSER--QNMLFSATMPGWVKKLARRNL 317

Query: 3770 QGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSR 3949
                 +       +        + I        ++L  L    AKG + +VF  T   + 
Sbjct: 318  NDPLTIDLVGDQDEKLAEGIKLYAIPTTATSKRTILSDLVTVYAKGGKAIVFTQTKRDAD 377

Query: 3950 AVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHV 4126
             V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +
Sbjct: 378  EVSMALT-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLI 434

Query: 4127 IMFDFPLNSIDYLHRTGRTARMGAKG 4204
            I ++ P +   ++HR+GRT R G +G
Sbjct: 435  IHYELPNDPETFVHRSGRTGRAGKEG 460


>ref|XP_010932029.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            3, chloroplastic [Elaeis guineensis]
          Length = 761

 Score = 1024 bits (2648), Expect = 0.0
 Identities = 558/780 (71%), Positives = 612/780 (78%), Gaps = 21/780 (2%)
 Frame = -2

Query: 2636 MSSIIAGISSFHHQSPSPTPCLELSKRTXXXXXXXXXXLQKFPXXXXXXXXLKPCKFRGF 2457
            M+SI+ G+SS +      +PCLEL KR               P           C  R  
Sbjct: 1    MASIV-GVSSLYR-----SPCLELPKRA-------------LPYLSPSSEKPPFCGLRAS 41

Query: 2456 GHPFPFSSSLRISFSRHCP------CAIATPNSVLSEEAFKGLG-LSKDDADDD------ 2316
                    SLR S     P       A+A+PNSVLSEEAFKGLG  SK   D +      
Sbjct: 42   ATTRGCCCSLRSSRPTAAPPRLLVPSAVASPNSVLSEEAFKGLGDFSKSSLDGEEGEEEY 101

Query: 2315 YASETGRE------AASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGR 2154
            Y SE   E         SE+ LA+++LGLP+QLV TL+KRGI +LFPIQRAVL+PALE R
Sbjct: 102  YGSEEEEEEDAEGSTVGSEEELAIANLGLPEQLVSTLEKRGITHLFPIQRAVLLPALESR 161

Query: 2153 DIIARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEI 1974
            D+IARAKTGTGKTLAFGIPIIKRLT D++ R +SRR GRLPR+LVLAPTRELAKQVEKEI
Sbjct: 162  DLIARAKTGTGKTLAFGIPIIKRLTEDNDDRRISRR-GRLPRVLVLAPTRELAKQVEKEI 220

Query: 1973 KESAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDE 1794
            KESAPYL TVCVYGGVSYN+QQNAL+RGVDVVVGTPGRIIDLINS SL LGEV+YLVLDE
Sbjct: 221  KESAPYLGTVCVYGGVSYNIQQNALARGVDVVVGTPGRIIDLINSNSLQLGEVEYLVLDE 280

Query: 1793 ADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEK 1614
            ADQMLAVGFEEDVEVILEKLPS+RQSMLFSATMPGWVKKL+R+YL++PLTIDLVGDQ+EK
Sbjct: 281  ADQMLAVGFEEDVEVILEKLPSDRQSMLFSATMPGWVKKLARRYLNDPLTIDLVGDQDEK 340

Query: 1613 LAEGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEAL 1434
            LAEGIKLYAIPTTATSKRTILSDL+TVYAKG KTIVFTQTKRDADEVSMAL+NSIASEAL
Sbjct: 341  LAEGIKLYAIPTTATSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEAL 400

Query: 1433 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGR 1254
            HGDISQHQRERTL+GFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGR
Sbjct: 401  HGDISQHQRERTLSGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 460

Query: 1253 TGRAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVH 1074
            TGRAGKEG  ILMFTSSQRRTV+SLERDVGC+FEFISPP ++EVLESSAEQVVATL+GVH
Sbjct: 461  TGRAGKEGTTILMFTSSQRRTVRSLERDVGCKFEFISPPLMQEVLESSAEQVVATLQGVH 520

Query: 1073 PESIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGY 894
            PESI++F+PTAQRL +E GT+ALAAALAHLSGFSQPPSSRSLI+HEQGWVTLQLTRE GY
Sbjct: 521  PESIQHFLPTAQRLTQELGTNALAAALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGY 580

Query: 893  SRGFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGN 714
            SRGFFS RSV GFLSDVYP AADE+GKI+LIADE VQGAVFDLPE+IAKELLN+Q PPGN
Sbjct: 581  SRGFFSPRSVTGFLSDVYPAAADEVGKIYLIADERVQGAVFDLPEEIAKELLNKQLPPGN 640

Query: 713  TISKITKLPALQDDGPASDNY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
            TISKI KLPALQDDGP +DNY                                       
Sbjct: 641  TISKIMKLPALQDDGPPTDNYGRFSNRDRGSRGGSRERGHRSSRNWGSRDYDSDDGFRRG 700

Query: 539  XXSYRTEXXXXXXXXXXXXXWLIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPN 360
              SYRT+             WLIG RRS R SSFG+RDR FGG+CFNCGR+GHRASECPN
Sbjct: 701  GRSYRTDNSWSRSSRGSNDDWLIGGRRSGRSSSFGSRDRGFGGACFNCGRTGHRASECPN 760



 Score =  150 bits (380), Expect = 7e-33
 Identities = 108/325 (33%), Positives = 166/325 (51%), Gaps = 2/325 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCPTRELCEQVF 3415
            LE + ++  + TG+GKTLA+ +PI++ L  D     +  + R PR +VL PTREL +QV 
Sbjct: 158  LESRDLIARAKTGTGKTLAFGIPIIKRLTEDNDDRRISRRGRLPRVLVLAPTRELAKQV- 216

Query: 3416 RVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDIK 3592
               K I   A +  T+ V GG     Q+++L   +D+VVGTPGR++  I   ++  G+++
Sbjct: 217  --EKEIKESAPYLGTVCVYGGVSYNIQQNALARGVDVVVGTPGRIIDLINSNSLQLGEVE 274

Query: 3593 YLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEFQ 3772
            YLVLDEAD M   GF  D+   L  L      P D+  Q++L +ATM   V+ L      
Sbjct: 275  YLVLDEADQMLAVGFEEDVEVILEKL------PSDR--QSMLFSATMPGWVKKLARRYLN 326

Query: 3773 GIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSRA 3952
                +       +        + I        ++L  L    AKG + +VF  T   +  
Sbjct: 327  DPLTIDLVGDQDEKLAEGIKLYAIPTTATSKRTILSDLVTVYAKGGKTIVFTQTKRDADE 386

Query: 3953 VDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHVI 4129
            V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +I
Sbjct: 387  VSMALT-NSIASEALHGDISQHQRERTLSGFR--QGKFTVLVATDVAARGLDIPNVDLII 443

Query: 4130 MFDFPLNSIDYLHRTGRTARMGAKG 4204
             ++ P +   ++HR+GRT R G +G
Sbjct: 444  HYELPNDPETFVHRSGRTGRAGKEG 468


>ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Phoenix dactylifera]
          Length = 759

 Score = 1006 bits (2602), Expect = 0.0
 Identities = 528/695 (75%), Positives = 585/695 (84%), Gaps = 14/695 (2%)
 Frame = -2

Query: 2402 PCAIATPNSVLSEEAFKGLG-LSKDDADDD------YASETGREAAS-----SEDNLAVS 2259
            P A+A+PNSVLSEEAFKGLG  SK   D +      Y SE   E A      S++ LA++
Sbjct: 66   PLAVASPNSVLSEEAFKGLGDFSKSSLDGEEGEEEYYGSEEEEEEAEGSTVGSKEELAIA 125

Query: 2258 DLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKRLT 2079
            +LGLP++LV  L++RGI +LFPIQRAVL+PALEGRD+IARAKTGTGKTLAFGIPIIKRLT
Sbjct: 126  NLGLPERLVSALEERGITHLFPIQRAVLLPALEGRDLIARAKTGTGKTLAFGIPIIKRLT 185

Query: 2078 VDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQNAL 1899
             D+EGR +S + GRLPR+LVLAPTRELAKQVEKEIKESAPYL TVCVYGGVSYN+QQN L
Sbjct: 186  EDNEGRRISSKRGRLPRVLVLAPTRELAKQVEKEIKESAPYLGTVCVYGGVSYNIQQNTL 245

Query: 1898 SRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQ 1719
            +RGVDVVVGTPGRIIDLI+S SL LGE+QYLVLDEAD+MLAVGFEEDVEVILEKLPS+RQ
Sbjct: 246  ARGVDVVVGTPGRIIDLIDSNSLQLGEIQYLVLDEADRMLAVGFEEDVEVILEKLPSDRQ 305

Query: 1718 SMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTILSDLI 1539
            SMLFSATMPGWVKKL+R+YL++PLTIDLVGDQ+EKLAEGIKLYAIPTT TSKRTILSDLI
Sbjct: 306  SMLFSATMPGWVKKLARRYLNDPLTIDLVGDQDEKLAEGIKLYAIPTTVTSKRTILSDLI 365

Query: 1538 TVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTVLV 1359
            TVYAKG KTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRERTL+ FRQGKFTVLV
Sbjct: 366  TVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLSSFRQGKFTVLV 425

Query: 1358 ATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVKSL 1179
            ATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTGRAGKEG AILMFTSSQR+TVKSL
Sbjct: 426  ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRKTVKSL 485

Query: 1178 ERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDALAA 999
            ERDVGC+FEF+SPP ++EVLESSAEQVVATL+GVHPESI++F+PTAQRL E+ GT+ALAA
Sbjct: 486  ERDVGCKFEFVSPPLMQEVLESSAEQVVATLRGVHPESIQHFLPTAQRLTEDLGTNALAA 545

Query: 998  ALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAADEI 819
            ALAHLSGFSQPPSSRSLI+HEQGWVTLQLTRE GYSRGFFS RSV GFLSDVYP AADE+
Sbjct: 546  ALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGYSRGFFSPRSVTGFLSDVYPAAADEV 605

Query: 818  GKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDNY--XX 645
            GKI+LIADE VQGAVFDLPE+IAKELLN+Q PPGNTISKI KLPALQDDGP++DNY    
Sbjct: 606  GKIYLIADERVQGAVFDLPEEIAKELLNKQLPPGNTISKIMKLPALQDDGPSTDNYGRFS 665

Query: 644  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXXXXWLIGN 465
                                                 SYRT+             W+I  
Sbjct: 666  NWDRGSRGGFRERGHRGSRNWGGQGYVSDDGFRRGGRSYRTD-NRWSRTGGSDDDWVISG 724

Query: 464  RRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPN 360
            RRS   SSFG+R+R FGG+CFNCGR+GHRASECPN
Sbjct: 725  RRSGWSSSFGSRERGFGGACFNCGRTGHRASECPN 759



 Score =  147 bits (371), Expect = 8e-32
 Identities = 110/326 (33%), Positives = 166/326 (50%), Gaps = 3/326 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRR-PRAVVLCPTRELCEQV 3412
            LE + ++  + TG+GKTLA+ +PI++ L  D     +  K  R PR +VL PTREL +QV
Sbjct: 157  LEGRDLIARAKTGTGKTLAFGIPIIKRLTEDNEGRRISSKRGRLPRVLVLAPTRELAKQV 216

Query: 3413 FRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDI 3589
                K I   A +  T+ V GG     Q+++L   +D+VVGTPGR++  I   ++  G+I
Sbjct: 217  ---EKEIKESAPYLGTVCVYGGVSYNIQQNTLARGVDVVVGTPGRIIDLIDSNSLQLGEI 273

Query: 3590 KYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEF 3769
            +YLVLDEAD M   GF  D+   L  L      P D+  Q++L +ATM   V+ L     
Sbjct: 274  QYLVLDEADRMLAVGFEEDVEVILEKL------PSDR--QSMLFSATMPGWVKKLARRYL 325

Query: 3770 QGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSR 3949
                 +       +        + I        ++L  L    AKG + +VF  T   + 
Sbjct: 326  NDPLTIDLVGDQDEKLAEGIKLYAIPTTVTSKRTILSDLITVYAKGGKTIVFTQTKRDAD 385

Query: 3950 AVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHV 4126
             V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +
Sbjct: 386  EVSMALT-NSIASEALHGDISQHQRERTLSSFR--QGKFTVLVATDVAARGLDIPNVDLI 442

Query: 4127 IMFDFPLNSIDYLHRTGRTARMGAKG 4204
            I ++ P +   ++HR+GRT R G +G
Sbjct: 443  IHYELPNDPETFVHRSGRTGRAGKEG 468


>ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Phoenix dactylifera]
          Length = 762

 Score = 1000 bits (2585), Expect = 0.0
 Identities = 531/703 (75%), Positives = 586/703 (83%), Gaps = 21/703 (2%)
 Frame = -2

Query: 2402 PCAIATPNSVLSEEAFKGLG-LSK------DDADDDYASETGREAASS-----EDNLAVS 2259
            P A+A+PNSVLSE+A KGLG LSK      +D ++ Y S+  +EAA       E++LAV+
Sbjct: 63   PSAVASPNSVLSEDALKGLGDLSKIPLEGEEDEEEYYGSD--KEAAEGPAVGGEEDLAVA 120

Query: 2258 DLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKRLT 2079
            +LGLP+QLV  L+KRGI +LFPIQRAVL+PALEGRD+IARAKTGTGKTLAFGIPIIKRL 
Sbjct: 121  NLGLPEQLVSALEKRGITHLFPIQRAVLLPALEGRDLIARAKTGTGKTLAFGIPIIKRLA 180

Query: 2078 VDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQNAL 1899
             D+E +++SRR GRLPR+LVLAPTRELAKQVEKEIKESAPYL TVCVYGGVSYN+QQNAL
Sbjct: 181  EDNERQSVSRR-GRLPRVLVLAPTRELAKQVEKEIKESAPYLGTVCVYGGVSYNIQQNAL 239

Query: 1898 SRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQ 1719
            + GVDVVVGTPGRIIDLINS SL LGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQ
Sbjct: 240  AHGVDVVVGTPGRIIDLINSSSLRLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQ 299

Query: 1718 SMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTILSDLI 1539
            +MLFSATMP WVKKL+R+YL++PLTIDLVGDQ+EKL EGIKLYAIPTT+TSKR ILSDLI
Sbjct: 300  NMLFSATMPSWVKKLARRYLNDPLTIDLVGDQDEKLPEGIKLYAIPTTSTSKRMILSDLI 359

Query: 1538 TVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTVLV 1359
             VYAK  KTIVFTQTKRDADEVSMAL+N+IASEALHGDISQHQRERTLNGFRQGKFTVLV
Sbjct: 360  MVYAKAGKTIVFTQTKRDADEVSMALTNNIASEALHGDISQHQRERTLNGFRQGKFTVLV 419

Query: 1358 ATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVKSL 1179
            ATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTGRAGKEG AILMF+SSQRRTVKSL
Sbjct: 420  ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFSSSQRRTVKSL 479

Query: 1178 ERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDALAA 999
            ERDVGC+FEFISPPQ++EVLESSAEQVVATL+GVHPESI++F+PTAQRL EE GT+ALA+
Sbjct: 480  ERDVGCKFEFISPPQMQEVLESSAEQVVATLQGVHPESIQHFLPTAQRLTEELGTNALAS 539

Query: 998  ALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAADEI 819
            ALAHLSGFSQPPSSRSLINHEQGWVTLQLTRE  Y+RGFFS RSV GFLSDVYP AADE+
Sbjct: 540  ALAHLSGFSQPPSSRSLINHEQGWVTLQLTREQEYTRGFFSPRSVTGFLSDVYPAAADEV 599

Query: 818  GKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDNY---- 651
            GKI+LIADE VQGAVFDLPE+IAKELL +Q PPGNTISKI KLPALQDDGP +DNY    
Sbjct: 600  GKIYLIADERVQGAVFDLPEEIAKELLKKQLPPGNTISKIMKLPALQDDGPPTDNYGRFS 659

Query: 650  -----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXX 486
                                                        SYRT+           
Sbjct: 660  NWDRGSRGSSRDRGRRGSRNGGGSSRNWGGRDNDSGDGFRRGGRSYRTDNSWSRSSRGSG 719

Query: 485  XXWLIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNK 357
              WLI  RRS R SSFG+RDR+FGG+C+NCGRSGHRASECP K
Sbjct: 720  DDWLISGRRSGRSSSFGSRDRNFGGACYNCGRSGHRASECPTK 762



 Score =  147 bits (372), Expect = 6e-32
 Identities = 113/364 (31%), Positives = 175/364 (48%), Gaps = 12/364 (3%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCPTRELCEQVF 3415
            LE + ++  + TG+GKTLA+ +PI++ L  D     +  + R PR +VL PTREL +QV 
Sbjct: 152  LEGRDLIARAKTGTGKTLAFGIPIIKRLAEDNERQSVSRRGRLPRVLVLAPTRELAKQV- 210

Query: 3416 RVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDIK 3592
               K I   A +  T+ V GG     Q+++L   +D+VVGTPGR++  I   ++  G+++
Sbjct: 211  --EKEIKESAPYLGTVCVYGGVSYNIQQNALAHGVDVVVGTPGRIIDLINSSSLRLGEVQ 268

Query: 3593 YLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEFQ 3772
            YLVLDEAD M   GF  D+   L  L      P ++  Q +L +ATM   V+ L      
Sbjct: 269  YLVLDEADQMLAVGFEEDVEVILEKL------PSER--QNMLFSATMPSWVKKLARRYLN 320

Query: 3773 GIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSRA 3952
                +       +        + I         +L  L    AK  + +VF  T   +  
Sbjct: 321  DPLTIDLVGDQDEKLPEGIKLYAIPTTSTSKRMILSDLIMVYAKAGKTIVFTQTKRDADE 380

Query: 3953 VDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHVI 4129
            V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +I
Sbjct: 381  VSMALT-NNIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLII 437

Query: 4130 MFDFPLNSIDYLHRTGRTARMGAKGKVTSLVA----------KRDLGLATRIEEAIRKNE 4279
             ++ P +   ++HR+GRT R G +G    + +          +RD+G         +  E
Sbjct: 438  HYELPNDPETFVHRSGRTGRAGKEGTAILMFSSSQRRTVKSLERDVGCKFEFISPPQMQE 497

Query: 4280 SLES 4291
             LES
Sbjct: 498  VLES 501


>ref|XP_006841548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Amborella trichopoda] gi|548843569|gb|ERN03223.1|
            hypothetical protein AMTR_s00003p00168720 [Amborella
            trichopoda]
          Length = 768

 Score =  994 bits (2571), Expect = 0.0
 Identities = 535/681 (78%), Positives = 576/681 (84%), Gaps = 19/681 (2%)
 Frame = -2

Query: 2636 MSSIIAGISSFHHQSPSPTPCLELSKRTXXXXXXXXXXLQKFPXXXXXXXXLKPCKFRGF 2457
            M+SII G+SS +      T  LELS+R                         KP +FR  
Sbjct: 1    MASII-GVSSLYQ-----TLSLELSRRASSQLP-------SLSSAPSYSSSEKP-QFRSL 46

Query: 2456 GHPFPFSSSLRISFS--------RH-----CPCAIATPNSVLSEEAFKGLG-LSK----- 2334
              P P + S   S S        RH      PCAIATPNSVLSEEAFKGLG LSK     
Sbjct: 47   SSPKPLNKSFEASCSLNGDSSAKRHGFKGLIPCAIATPNSVLSEEAFKGLGGLSKGRGFK 106

Query: 2333 DDADDDYASETGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGR 2154
            DD +DDY  E G EA S+E+NLA+ +LGL ++LVD L KRGI +LFPIQRAVL+PALEGR
Sbjct: 107  DDGEDDYELEVGSEA-SNEENLAIGNLGLREELVDALAKRGITHLFPIQRAVLVPALEGR 165

Query: 2153 DIIARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEI 1974
            DII RAKTGTGKTLAF IPIIKRL  DDEGR+ SR  GRLPR+LVLAPTRELAKQVEKEI
Sbjct: 166  DIIGRAKTGTGKTLAFAIPIIKRL--DDEGRSPSR--GRLPRVLVLAPTRELAKQVEKEI 221

Query: 1973 KESAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDE 1794
            KESAPYLSTVCVYGGVSYN+QQNAL+RGVDVVVGTPGRIIDL+N  SL LGEVQYLVLDE
Sbjct: 222  KESAPYLSTVCVYGGVSYNIQQNALTRGVDVVVGTPGRIIDLVNGNSLQLGEVQYLVLDE 281

Query: 1793 ADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEK 1614
            ADQMLAVGFEEDVEVILEKLP+ RQSMLFSATMPGWVKKL+RKYLDNP+TIDLVGDQEEK
Sbjct: 282  ADQMLAVGFEEDVEVILEKLPTGRQSMLFSATMPGWVKKLARKYLDNPMTIDLVGDQEEK 341

Query: 1613 LAEGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEAL 1434
            LAEGIKLYAIPTTAT+KRTIL DLITVYAKG KTIVFTQTKRDADEVS+AL++SI SEAL
Sbjct: 342  LAEGIKLYAIPTTATTKRTILGDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEAL 401

Query: 1433 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGR 1254
            HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGR
Sbjct: 402  HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 461

Query: 1253 TGRAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVH 1074
            TGRAGKEG AILMFT SQRRT+KSLERDVGC FEFISPPQ+EEVLESSAEQVVATLKGVH
Sbjct: 462  TGRAGKEGTAILMFTGSQRRTIKSLERDVGCSFEFISPPQMEEVLESSAEQVVATLKGVH 521

Query: 1073 PESIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGY 894
            PESI++F+P AQR+IEEQGTDALAAALAHLSGFSQPPSSRSL+ HEQGWVTLQLTRE G+
Sbjct: 522  PESIQFFLPAAQRMIEEQGTDALAAALAHLSGFSQPPSSRSLVTHEQGWVTLQLTREQGF 581

Query: 893  SRGFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGN 714
            SRGF SARSV GFLSD+YP AADE+GKIHLIADE VQGAVFDLPE+IAKELL +QTPPGN
Sbjct: 582  SRGFLSARSVTGFLSDIYPAAADEVGKIHLIADERVQGAVFDLPEEIAKELLTKQTPPGN 641

Query: 713  TISKITKLPALQDDGPASDNY 651
            TISKITKLP LQDDGP+ DNY
Sbjct: 642  TISKITKLPPLQDDGPSGDNY 662



 Score =  145 bits (365), Expect = 4e-31
 Identities = 115/373 (30%), Positives = 182/373 (48%), Gaps = 12/373 (3%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCP 3388
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  +        + R PR +VL P
Sbjct: 153  IQRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKRLDDEGRSPS---RGRLPRVLVLAP 209

Query: 3389 TRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKD 3565
            TREL +QV    K I   A + ST+ V GG     Q+++L   +D+VVGTPGR++  +  
Sbjct: 210  TRELAKQV---EKEIKESAPYLSTVCVYGGVSYNIQQNALTRGVDVVVGTPGRIIDLVNG 266

Query: 3566 GNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAV 3745
             ++  G+++YLVLDEAD M   GF  D+   L  L          G Q++L +ATM   V
Sbjct: 267  NSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKL--------PTGRQSMLFSATMPGWV 318

Query: 3746 QMLIDEEFQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVF 3925
            + L  +       +      ++        + I        ++L  L    AKG + +VF
Sbjct: 319  KKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATTKRTILGDLITVYAKGGKTIVF 378

Query: 3926 CNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGL 4105
              T   +  V   L+ + I +   HG++   +R   L  F+   G    LV TD+AARGL
Sbjct: 379  TQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGL 435

Query: 4106 DL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG----------KVTSLVAKRDLGLATR 4252
            D+ +VD +I ++ P +   ++HR+GRT R G +G          + T    +RD+G +  
Sbjct: 436  DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTGSQRRTIKSLERDVGCSFE 495

Query: 4253 IEEAIRKNESLES 4291
                 +  E LES
Sbjct: 496  FISPPQMEEVLES 508



 Score = 81.3 bits (199), Expect = 7e-12
 Identities = 34/43 (79%), Positives = 41/43 (95%)
 Frame = -2

Query: 476 LIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNKQDY 348
           LIGNRRSNR SSFG+RDRSFGG+CF CGR+GHRA++CP+KQD+
Sbjct: 726 LIGNRRSNRSSSFGSRDRSFGGACFVCGRAGHRAADCPSKQDF 768


>ref|XP_009383719.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Musa acuminata subsp. malaccensis]
          Length = 776

 Score =  989 bits (2558), Expect = 0.0
 Identities = 522/699 (74%), Positives = 576/699 (82%), Gaps = 19/699 (2%)
 Frame = -2

Query: 2396 AIATPNSVLSEEAFKGL-GLSKDDAD---------DDYASETGRE------AASSEDNLA 2265
            A+A+PNSVLSEEAF+G  GLSK   +         D Y SE   E      A   E+ +A
Sbjct: 78   AVASPNSVLSEEAFQGFRGLSKSSLEEGEEEGYDADTYESEEEEEGPFSATAGHDENEVA 137

Query: 2264 VSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKR 2085
            ++ L LPQQLV +L+KRGI +LFPIQRAVL+PALEGRD+IARAKTGTGKTLAFGIPIIKR
Sbjct: 138  IASLDLPQQLVSSLEKRGITHLFPIQRAVLLPALEGRDLIARAKTGTGKTLAFGIPIIKR 197

Query: 2084 LTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQN 1905
            L+  D GR  SR++G LPR+LVLAPTRELAKQVEKEI ESAPYLSTVCVYGGVSYNVQ++
Sbjct: 198  LSEADLGRKTSRQSGHLPRVLVLAPTRELAKQVEKEIDESAPYLSTVCVYGGVSYNVQKS 257

Query: 1904 ALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSE 1725
            ALSRGVDVVVGTPGRIIDLIN  SL LGEV+YLVLDEAD+MLAVGFEEDVE+ILEKLPS+
Sbjct: 258  ALSRGVDVVVGTPGRIIDLINDNSLRLGEVEYLVLDEADRMLAVGFEEDVELILEKLPSK 317

Query: 1724 RQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTILSD 1545
            RQSMLFSATMP WVKKL+R++L++PL +DLVGDQ+EKLAEGIKLYA+PTT+TSKRTILSD
Sbjct: 318  RQSMLFSATMPDWVKKLARRHLNDPLIVDLVGDQDEKLAEGIKLYAVPTTSTSKRTILSD 377

Query: 1544 LITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTV 1365
            LITVYAKG KTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRERTLNGFRQGKFTV
Sbjct: 378  LITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTV 437

Query: 1364 LVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVK 1185
            LVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTGRAGKEG AILMFTSSQRRTVK
Sbjct: 438  LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVK 497

Query: 1184 SLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDAL 1005
            SLERDVGCRFEF SPP ++EVLESSAEQVVATL+GVH ESI+YF+P AQRLI+E GT AL
Sbjct: 498  SLERDVGCRFEFTSPPAMQEVLESSAEQVVATLQGVHSESIQYFLPAAQRLIDELGTQAL 557

Query: 1004 AAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAAD 825
            AAALAHLSGFSQPPSS SLI+HEQGWVTLQLTRE G+SRGFFSARSV GFLSDV+P AAD
Sbjct: 558  AAALAHLSGFSQPPSSHSLISHEQGWVTLQLTRESGHSRGFFSARSVTGFLSDVFPAAAD 617

Query: 824  EIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDNY-- 651
            E+GKI++IADE VQGAVFDLP+DIAKELLN+Q PPGN+ISKITKLP LQDDGP  DNY  
Sbjct: 618  EVGKIYMIADERVQGAVFDLPDDIAKELLNKQLPPGNSISKITKLPTLQDDGPPVDNYGR 677

Query: 650  -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXXXXWL 474
                                                     YRT+             WL
Sbjct: 678  FSNRDWGSRGGGSGERSQRVSRNWGGRNSDSGDGFRRGGQVYRTDNSWSKSPRGSEDDWL 737

Query: 473  IGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNK 357
            IG RRS+  SS G+R+R FGG+CFNCGRSGHRASECPNK
Sbjct: 738  IGGRRSHHSSSQGSRERGFGGACFNCGRSGHRASECPNK 776



 Score =  147 bits (371), Expect = 8e-32
 Identities = 110/328 (33%), Positives = 168/328 (51%), Gaps = 5/328 (1%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDEL-LYGMLMKPRRPRAVVLCPTRELCEQV 3412
            LE + ++  + TG+GKTLA+ +PI++ L   +L           PR +VL PTREL +QV
Sbjct: 171  LEGRDLIARAKTGTGKTLAFGIPIIKRLSEADLGRKTSRQSGHLPRVLVLAPTRELAKQV 230

Query: 3413 FRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDI 3589
                K I   A + ST+ V GG     Q+ +L+  +D+VVGTPGR++  I D ++  G++
Sbjct: 231  ---EKEIDESAPYLSTVCVYGGVSYNVQKSALSRGVDVVVGTPGRIIDLINDNSLRLGEV 287

Query: 3590 KYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEF 3769
            +YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   V+ L     
Sbjct: 288  EYLVLDEADRMLAVGFEEDVELILEKLPSKR--------QSMLFSATMPDWVKKLARRHL 339

Query: 3770 QG--IAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNS 3943
                I  L      +K+A      + +        ++L  L    AKG + +VF  T   
Sbjct: 340  NDPLIVDL-VGDQDEKLAEG-IKLYAVPTTSTSKRTILSDLITVYAKGGKTIVFTQTKRD 397

Query: 3944 SRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVD 4120
            +  V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD
Sbjct: 398  ADEVSMALT-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVD 454

Query: 4121 HVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
             +I ++ P +   ++HR+GRT R G +G
Sbjct: 455  LIIHYELPNDPETFVHRSGRTGRAGKEG 482


>ref|XP_011039072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Populus euphratica]
          Length = 776

 Score =  984 bits (2545), Expect = 0.0
 Identities = 526/700 (75%), Positives = 570/700 (81%), Gaps = 15/700 (2%)
 Frame = -2

Query: 2402 PCAIATPNSVLSEEAFKGL-GLSKDDADDD-------YAS-ETGREAASSEDNLAVSDLG 2250
            P AIA+PNS+LSEEAFKGL G S  +AD +       YAS ET   + +SED L VS LG
Sbjct: 80   PSAIASPNSILSEEAFKGLDGFSDFEADVEAGGADVHYASSETEPSSNTSEDELDVSKLG 139

Query: 2249 LPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKRLTVDD 2070
            LP +LV TLQ RGI +LFPIQRAVLIPALEGRD+IARAKTGTGKTLAFGIPIIKRLT D 
Sbjct: 140  LPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPIIKRLTEDC 199

Query: 2069 EGRALSRR-AGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQNALSR 1893
                L+RR  GRLP++LVLAPTRELAKQVEKEIKESA YLSTVCVYGGVSY  QQ+ALSR
Sbjct: 200  XXXXLARRRTGRLPKVLVLAPTRELAKQVEKEIKESATYLSTVCVYGGVSYVTQQSALSR 259

Query: 1892 GVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQSM 1713
            GVDVVVGTPGRIIDL+   SL LGEV+YLVLDEADQML+ GFEEDVEVILE LPS+RQSM
Sbjct: 260  GVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSKRQSM 319

Query: 1712 LFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTILSDLITV 1533
            LFSATMP WVKKL+RKYLDNPL IDLVGDQEEKLAEGIKLYA+  TA SKRTILSDL+TV
Sbjct: 320  LFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYALSATAASKRTILSDLVTV 379

Query: 1532 YAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 1353
            YAKG KTI+FTQTKRDADEVSMAL+N++ASEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 380  YAKGGKTIIFTQTKRDADEVSMALTNTVASEALHGDISQHQRERTLNGFRQGKFTVLVAT 439

Query: 1352 DVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVKSLER 1173
            DVA+RGLDIPNVDLIIHYE+PND ETFVHRSGRTGRAGKEG AILMFTSSQRRTV+SLER
Sbjct: 440  DVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLER 499

Query: 1172 DVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDALAAAL 993
            D GC+FEF+SPP IEEVLESSAEQVVATL GVHPES+E+F PTAQ+LIEEQGT ALAAAL
Sbjct: 500  DAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFFTPTAQKLIEEQGTSALAAAL 559

Query: 992  AHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAADEIGK 813
            AHLSGFSQPPSSRSLI+HEQGW TLQLTR+P YSRGF SARSV GFLSDVYP AADE+GK
Sbjct: 560  AHLSGFSQPPSSRSLISHEQGWATLQLTRDPTYSRGFLSARSVTGFLSDVYPAAADEVGK 619

Query: 812  IHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDNYXXXXXX 633
            IH+IADE VQGAVFDLPE+IAKELLN+Q PPGNTI+KITKLPALQDDGP  D Y      
Sbjct: 620  IHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITKLPALQDDGPPGDFYGRFSSR 679

Query: 632  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSY-----RTEXXXXXXXXXXXXXWLIG 468
                                              +       E             WLIG
Sbjct: 680  DRPARGGPRGQRGGFRSSRGRGSGRDSDDEGMYRHGGRSNSNENSWSRMSRSSGDDWLIG 739

Query: 467  NRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNKQDY 348
             RRS+RP S   RDRSFGGSCFNCGRSGHRASECPN++D+
Sbjct: 740  GRRSSRPPS---RDRSFGGSCFNCGRSGHRASECPNRKDF 776



 Score =  150 bits (379), Expect = 9e-33
 Identities = 103/327 (31%), Positives = 170/327 (51%), Gaps = 4/327 (1%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKP--RRPRAVVLCPTRELCEQ 3409
            LE + ++  + TG+GKTLA+ +PI++ L  D     +  +   R P+ +VL PTREL +Q
Sbjct: 168  LEGRDLIARAKTGTGKTLAFGIPIIKRLTEDCXXXXLARRRTGRLPKVLVLAPTRELAKQ 227

Query: 3410 VFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGD 3586
            V    K I   A + ST+ V GG     Q+ +L+  +D+VVGTPGR++  +K  ++  G+
Sbjct: 228  V---EKEIKESATYLSTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLLKGNSLKLGE 284

Query: 3587 IKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEE 3766
            ++YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   V+ L  + 
Sbjct: 285  VEYLVLDEADQMLSFGFEEDVEVILENLPSKR--------QSMLFSATMPTWVKKLARKY 336

Query: 3767 FQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSS 3946
                  +      ++        + +S       ++L  L    AKG + ++F  T   +
Sbjct: 337  LDNPLQIDLVGDQEEKLAEGIKLYALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDA 396

Query: 3947 RAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDH 4123
              V   L+ N + +   HG++   +R   L  F+   G    LV TD+A+RGLD+ +VD 
Sbjct: 397  DEVSMALT-NTVASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVASRGLDIPNVDL 453

Query: 4124 VIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            +I ++ P ++  ++HR+GRT R G +G
Sbjct: 454  IIHYELPNDAETFVHRSGRTGRAGKEG 480


>ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 769

 Score =  982 bits (2538), Expect = 0.0
 Identities = 512/623 (82%), Positives = 557/623 (89%), Gaps = 19/623 (3%)
 Frame = -2

Query: 2462 GFGHPFPFSSSLRISFSRH---CPCAIATPNSVLSEEAFKGL-GLSKDDAD--------- 2322
            GF  P   SS L++  +      P A+A+PNSVLSEEAFKG  GLSK   +         
Sbjct: 31   GFDKPRSSSSLLKVCGAARRLFVPSAVASPNSVLSEEAFKGFRGLSKSPLEQGEEEEYGS 90

Query: 2321 DDYASETGREAASS------EDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALE 2160
            D Y SE   E +SS      +D LA+++L LPQQLV +L+KRGI +LFPIQRAVL+PALE
Sbjct: 91   DAYNSEEEEEGSSSAAAGQDKDELAITNLDLPQQLVSSLEKRGITHLFPIQRAVLLPALE 150

Query: 2159 GRDIIARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEK 1980
            G+DIIARAKTGTGKTLAFGIPIIKRL+  DEGR  SR+ GRLPR LVLAPTRELA+QVEK
Sbjct: 151  GQDIIARAKTGTGKTLAFGIPIIKRLSEGDEGRRKSRQLGRLPRALVLAPTRELARQVEK 210

Query: 1979 EIKESAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVL 1800
            EIKESAPYLSTVCVYGGVSYN+Q+NALSRGVDVVVGTPGRIIDLIN  SL LGEVQ+LVL
Sbjct: 211  EIKESAPYLSTVCVYGGVSYNIQKNALSRGVDVVVGTPGRIIDLINDNSLRLGEVQFLVL 270

Query: 1799 DEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQE 1620
            DEADQMLAVGFEEDVEVILEKLPSERQ+MLFSATMPGWVKKL+R+ L++PLTIDLVGDQ+
Sbjct: 271  DEADQMLAVGFEEDVEVILEKLPSERQNMLFSATMPGWVKKLARRNLNDPLTIDLVGDQD 330

Query: 1619 EKLAEGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASE 1440
            EKLAEGIKLYAIPTTATSKRTILSDL+TVYAKG K IVFTQTKRDADEVSMAL+NSIASE
Sbjct: 331  EKLAEGIKLYAIPTTATSKRTILSDLVTVYAKGGKAIVFTQTKRDADEVSMALTNSIASE 390

Query: 1439 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRS 1260
            ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRS
Sbjct: 391  ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 450

Query: 1259 GRTGRAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKG 1080
            GRTGRAGKEG AILMFTSSQRRTVKSLERDVGCRFEFISPPQ++E+LESSAEQVVATL+G
Sbjct: 451  GRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCRFEFISPPQMQEILESSAEQVVATLQG 510

Query: 1079 VHPESIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREP 900
            VHPESIEYF+PTAQRL +EQGT ALAAALAHLSGFS+PPSSRSLINHEQGWVTLQLTREP
Sbjct: 511  VHPESIEYFLPTAQRLTDEQGTQALAAALAHLSGFSRPPSSRSLINHEQGWVTLQLTREP 570

Query: 899  GYSRGFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPP 720
            GYSRGFFSARSV GFLSDV P AADE+GKI+LIADE +QGAVFDLPEDIAKELLN+Q PP
Sbjct: 571  GYSRGFFSARSVTGFLSDVVPAAADEVGKIYLIADERIQGAVFDLPEDIAKELLNKQLPP 630

Query: 719  GNTISKITKLPALQDDGPASDNY 651
            GN+ISKITKLP LQDDGP++DNY
Sbjct: 631  GNSISKITKLPTLQDDGPSTDNY 653



 Score =  149 bits (377), Expect = 2e-32
 Identities = 110/326 (33%), Positives = 167/326 (51%), Gaps = 3/326 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRH-DELLYGMLMKPRRPRAVVLCPTRELCEQV 3412
            LE + ++  + TG+GKTLA+ +PI++ L   DE         R PRA+VL PTREL  QV
Sbjct: 149  LEGQDIIARAKTGTGKTLAFGIPIIKRLSEGDEGRRKSRQLGRLPRALVLAPTRELARQV 208

Query: 3413 FRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDI 3589
                K I   A + ST+ V GG     Q+++L+  +D+VVGTPGR++  I D ++  G++
Sbjct: 209  ---EKEIKESAPYLSTVCVYGGVSYNIQKNALSRGVDVVVGTPGRIIDLINDNSLRLGEV 265

Query: 3590 KYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEF 3769
            ++LVLDEAD M   GF  D+   L  L      P ++  Q +L +ATM   V+ L     
Sbjct: 266  QFLVLDEADQMLAVGFEEDVEVILEKL------PSER--QNMLFSATMPGWVKKLARRNL 317

Query: 3770 QGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSR 3949
                 +       +        + I        ++L  L    AKG + +VF  T   + 
Sbjct: 318  NDPLTIDLVGDQDEKLAEGIKLYAIPTTATSKRTILSDLVTVYAKGGKAIVFTQTKRDAD 377

Query: 3950 AVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHV 4126
             V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +
Sbjct: 378  EVSMALT-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLI 434

Query: 4127 IMFDFPLNSIDYLHRTGRTARMGAKG 4204
            I ++ P +   ++HR+GRT R G +G
Sbjct: 435  IHYELPNDPETFVHRSGRTGRAGKEG 460



 Score = 81.3 bits (199), Expect = 7e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -2

Query: 476 LIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNK 357
           LIG RRS+R SS+GNRDRSFGG+CFNCGRSGHRASECPNK
Sbjct: 730 LIGGRRSSRSSSYGNRDRSFGGTCFNCGRSGHRASECPNK 769


>ref|XP_008450498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Cucumis melo]
          Length = 748

 Score =  976 bits (2523), Expect = 0.0
 Identities = 520/703 (73%), Positives = 570/703 (81%), Gaps = 8/703 (1%)
 Frame = -2

Query: 2441 FSSSLRISFSRHCPCAIATPNSVLSEEAFKGL-GLSKDDADD---DYASETGREAASSED 2274
            FS S R + S     AIATPNS+LSEEAF+ L G SKD  DD   D    +    ++ +D
Sbjct: 51   FSGSSRRNLSGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDD 110

Query: 2273 NLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPI 2094
             LA+S L LPQ+L D LQKRGI +LFPIQRAVL+PALEGRD+IARAKTGTGKTLAFGIPI
Sbjct: 111  ELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI 170

Query: 2093 IKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNV 1914
            +K+LT DDE R+L RR+ RLPR+LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  
Sbjct: 171  LKKLTEDDESRSLRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 229

Query: 1913 QQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKL 1734
            QQNALSRGVDVVVGTPGR+IDLIN  SL LGEV+YLVLDEADQMLAVGFEEDVEVILEKL
Sbjct: 230  QQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 289

Query: 1733 PSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTI 1554
            PS+RQ+MLFSATMP WVKKL+RKYLDNPLTIDLVGDQ+EKLAEGIKL+AI TTATSK+TI
Sbjct: 290  PSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 349

Query: 1553 LSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGK 1374
            L DL+TVYAKG KTIVFTQTKRDADEVS+AL+NSI SEALHGDISQHQRERTLNGFRQGK
Sbjct: 350  LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 409

Query: 1373 FTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRR 1194
            FTVLVATDVA+RGLDIPNVDL+IHYE+PNDPETFVHRSGRTGRAGKEG AILMFT+SQRR
Sbjct: 410  FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 469

Query: 1193 TVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGT 1014
            TV+SLERDVGC+FEF +PP IE+VLESSAEQVV TL+GVHPESIEYF PTAQ+LI+EQG 
Sbjct: 470  TVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGP 529

Query: 1013 DALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPR 834
             ALAAALA LSGFS PPSSRSLINHEQGWVTLQLTR+P YSRGF SARSV GFLSD+Y  
Sbjct: 530  GALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSP 589

Query: 833  AADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDN 654
            AADEIGKIHLIADE + GAVFDLPE+IAKELLN++ P GNTI K+TKLP LQDDGP SDN
Sbjct: 590  AADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDN 649

Query: 653  Y----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXX 486
            Y                                           S+RT            
Sbjct: 650  YGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSG 709

Query: 485  XXWLIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNK 357
              WLIG RRS+R SS    DR FGGSCFNCGR GHRASECP+K
Sbjct: 710  DDWLIGGRRSSRSSSV---DR-FGGSCFNCGRMGHRASECPDK 748



 Score =  151 bits (381), Expect = 5e-33
 Identities = 111/335 (33%), Positives = 178/335 (53%), Gaps = 3/335 (0%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCP 3388
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  D+    +  + R PR +VL P
Sbjct: 138  IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLPRVLVLTP 197

Query: 3389 TRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKD 3565
            TREL +QV    K I   A + +T+ V GG     Q+++L+  +D+VVGTPGR++  I  
Sbjct: 198  TRELAKQV---EKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRLIDLING 254

Query: 3566 GNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAV 3745
             ++  G+++YLVLDEAD M   GF  D+   L  L  +         Q +L +ATM   V
Sbjct: 255  NSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR--------QNMLFSATMPTWV 306

Query: 3746 QMLIDEEFQGIAHL-RTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMV 3922
            + L  +       +       +K+A        ++ A +K +++L+ L    AKG + +V
Sbjct: 307  KKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSK-QTILRDLVTVYAKGGKTIV 365

Query: 3923 FCNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARG 4102
            F  T   +  V   L+ N I +   HG++   +R   L  F+   G    LV TD+A+RG
Sbjct: 366  FTQTKRDADEVSLALA-NSITSEALHGDISQHQRERTLNGFR--QGKFTVLVATDVASRG 422

Query: 4103 LDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            LD+ +VD VI ++ P +   ++HR+GRT R G +G
Sbjct: 423  LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 457


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  976 bits (2522), Expect = 0.0
 Identities = 538/791 (68%), Positives = 589/791 (74%), Gaps = 29/791 (3%)
 Frame = -2

Query: 2633 SSIIAGISSFHHQSPSPTPCLELSKRTXXXXXXXXXXLQKFPXXXXXXXXLKPCKF---- 2466
            +S + G+SS  H     TP +ELS R             K          L+ C      
Sbjct: 3    TSSVLGVSSIFH-----TPSVELSSRKTNSTTLSIPTTDK---PHFNSLVLQSCSLYNNK 54

Query: 2465 RGFGHPFPFSSSLRISFSRHCPCAIATPNSVLSEEAFKGLG--LSKDDADDD-------- 2316
             G GH            S     AIA PNS+LSEEAFKGLG  LS  D D+D        
Sbjct: 55   HGHGH----------GHSSFVTSAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGG 104

Query: 2315 YASETGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARA 2136
            Y  +   E+   +D LA+S LGLPQ+LV++L+KRGI +LFPIQRAVL+PALEGRD+IARA
Sbjct: 105  YEDDGAGESLPDDDELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARA 164

Query: 2135 KTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPY 1956
            KTGTGKTLAFGIPIIK +T DD  ++  RR GRLPR+LVLAPTRELAKQVEKEI ESAPY
Sbjct: 165  KTGTGKTLAFGIPIIKCITEDD--KSSQRRTGRLPRVLVLAPTRELAKQVEKEINESAPY 222

Query: 1955 LSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLA 1776
            LSTVCVYGGVSY  Q+NALSRGVDVVVGTPGRIIDLINS SL LGEV+YLVLDEADQML+
Sbjct: 223  LSTVCVYGGVSYITQRNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLS 282

Query: 1775 VGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIK 1596
             GFEEDVEVILE LPS+RQSMLFSATMP WVKKL+RKYLDNPL IDLVGDQEEKLAEGIK
Sbjct: 283  FGFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIK 342

Query: 1595 LYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQ 1416
            LYAI T ATSKR+ILSDL+TVYAKG KTI+FTQTKRDADEVSM L+NSIASEALHGDISQ
Sbjct: 343  LYAISTNATSKRSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQ 402

Query: 1415 HQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGK 1236
            HQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYE+PNDPETFVHRSGRTGRAGK
Sbjct: 403  HQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGK 462

Query: 1235 EGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEY 1056
            EG A+LMFTSSQRRTVKSLERDVGCRFEF+SPP  EEVLESSAEQV+ATL GVHPES+ +
Sbjct: 463  EGTAVLMFTSSQRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGF 522

Query: 1055 FVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFS 876
            F PTAQRLIEEQGT ALAAALA LSGFSQPPSSRSLI+HEQGW TLQLTR+P YSRGF S
Sbjct: 523  FTPTAQRLIEEQGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLS 582

Query: 875  ARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKIT 696
            ARSV GFLSDVY  AADE+GKIH+IADE+VQGAVFDLPE+IAKELLN+Q PPGNTISKIT
Sbjct: 583  ARSVTGFLSDVYTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKIT 642

Query: 695  KLPALQDDGPASDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEX 516
            KLP+LQDDGP SD Y                                             
Sbjct: 643  KLPSLQDDGPPSDFYGRFSSRDRPPRGGGRGQRGSRSSQGWGGGRGGRNSDDDDDTFRRG 702

Query: 515  XXXXXXXXXXXXWLIGNRRSNRPSSFGN---------RDR------SFGGSCFNCGRSGH 381
                         + G R S+RPS  G          RDR      SFGGSCFNCGRSGH
Sbjct: 703  GRSFSRSSSDDWLIGGGR-SSRPSPRGRSSPRDWSSPRDRSSPRDRSFGGSCFNCGRSGH 761

Query: 380  RASECPNKQDY 348
            RAS+CPNK D+
Sbjct: 762  RASDCPNKLDF 772



 Score =  155 bits (391), Expect = 4e-34
 Identities = 110/334 (32%), Positives = 172/334 (51%), Gaps = 2/334 (0%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCP 3388
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ +  D+         R PR +VL P
Sbjct: 146  IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKCITEDDKS-SQRRTGRLPRVLVLAP 204

Query: 3389 TRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKD 3565
            TREL +QV    K I+  A + ST+ V GG     Q ++L+  +D+VVGTPGR++  I  
Sbjct: 205  TRELAKQV---EKEINESAPYLSTVCVYGGVSYITQRNALSRGVDVVVGTPGRIIDLINS 261

Query: 3566 GNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAV 3745
            G++  G+++YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   V
Sbjct: 262  GSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSKR--------QSMLFSATMPTWV 313

Query: 3746 QMLIDEEFQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVF 3925
            + L  +       +      ++        + IS       S+L  L    AKG + ++F
Sbjct: 314  KKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATSKRSILSDLVTVYAKGGKTIIF 373

Query: 3926 CNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGL 4105
              T   +  V   L+ N I +   HG++   +R   L  F+   G    LV TD+A+RGL
Sbjct: 374  TQTKRDADEVSMVLT-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVASRGL 430

Query: 4106 DL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            D+ +VD VI ++ P +   ++HR+GRT R G +G
Sbjct: 431  DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 464


>ref|XP_010546798.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Tarenaya hassleriana]
          Length = 739

 Score =  974 bits (2517), Expect = 0.0
 Identities = 523/715 (73%), Positives = 569/715 (79%), Gaps = 6/715 (0%)
 Frame = -2

Query: 2474 CKFRGFGHPFPFSSSLR-----ISFSRHCPCAIATPNSVLSEEAFKGLGLSKDDADDDYA 2310
            C       PF  S  LR     +S S   P A+ATPNSVLSEEAFKGLGLS    DD+ A
Sbjct: 29   CLVFSLDRPFFRSLPLRRPCVSLSSSSVIPSAVATPNSVLSEEAFKGLGLS----DDENA 84

Query: 2309 SETGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKT 2130
             +    A  S D LA+S LGLP++L D+L+KRGI +LFPIQRAVLIPALEGRDIIARAKT
Sbjct: 85   LDEENGAVPSSDELAISKLGLPERLADSLEKRGITHLFPIQRAVLIPALEGRDIIARAKT 144

Query: 2129 GTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLS 1950
            GTGKTLAFGIPIIKRLT D    +  RR+GRLP+LLVLAPTRELAKQVEKEIKESAPYLS
Sbjct: 145  GTGKTLAFGIPIIKRLTEDAVDHSSFRRSGRLPKLLVLAPTRELAKQVEKEIKESAPYLS 204

Query: 1949 TVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVG 1770
            TVCVYGGVSYN QQ+ALSRGVDVVVGTPGRIIDLI  +SL LGEV+YLVLDEADQMLAVG
Sbjct: 205  TVCVYGGVSYNTQQSALSRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVG 264

Query: 1769 FEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLY 1590
            FEE VE ILE LPS+RQSMLFSATMP WVKKL+RKYLDNPL IDLVGD+EEKLAEGIKLY
Sbjct: 265  FEEAVESILENLPSKRQSMLFSATMPSWVKKLARKYLDNPLNIDLVGDREEKLAEGIKLY 324

Query: 1589 AIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQ 1410
            AIP T+TSKRTILSDLITVYAKG KTIVFTQTK+DADEVS+AL++SIASEALHGDISQHQ
Sbjct: 325  AIPATSTSKRTILSDLITVYAKGGKTIVFTQTKKDADEVSLALTSSIASEALHGDISQHQ 384

Query: 1409 RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEG 1230
            RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTGRAGKEG
Sbjct: 385  RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG 444

Query: 1229 VAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFV 1050
             A+LMFTSSQRRTV+SLERDVGC FEFISPP + EVLE+SAEQVVATL GVHPESIE+F 
Sbjct: 445  TAVLMFTSSQRRTVRSLERDVGCNFEFISPPTVGEVLEASAEQVVATLNGVHPESIEFFS 504

Query: 1049 PTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSAR 870
             TA+RL EE+GT ALAAALA LSGF+QPPSSRSLI+HEQGWVTLQL R+P  SRG+ S R
Sbjct: 505  ATAERLFEEKGTGALAAALAQLSGFAQPPSSRSLISHEQGWVTLQLMRDPSNSRGYLSVR 564

Query: 869  SVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKL 690
            SV GFLSDVY  AADE+GKI LIAD+ VQGAVFDLPEDIAKELL+Q+ PPGN+ISKITKL
Sbjct: 565  SVTGFLSDVYTPAADEVGKIFLIADDRVQGAVFDLPEDIAKELLDQELPPGNSISKITKL 624

Query: 689  PALQDDGPASDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXX 510
            P LQDDGPASD Y                                               
Sbjct: 625  PPLQDDGPASDFYGRFSSRDRMPRGGSRGGGSRGSRSGRGSRGWGGGRDSDDERGGRNNW 684

Query: 509  XXXXXXXXXXWLI-GNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNKQDY 348
                      WLI G  R +  SS  +RDRSFGGSCF CGRSGHRA++CP K+DY
Sbjct: 685  SRGSRESKDDWLISGGGRRSSRSSSSSRDRSFGGSCFICGRSGHRATDCPGKRDY 739



 Score =  149 bits (376), Expect = 2e-32
 Identities = 104/326 (31%), Positives = 169/326 (51%), Gaps = 3/326 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRR-PRAVVLCPTRELCEQV 3412
            LE + ++  + TG+GKTLA+ +PI++ L  D + +    +  R P+ +VL PTREL +QV
Sbjct: 133  LEGRDIIARAKTGTGKTLAFGIPIIKRLTEDAVDHSSFRRSGRLPKLLVLAPTRELAKQV 192

Query: 3413 FRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDI 3589
                K I   A + ST+ V GG     Q+ +L+  +D+VVGTPGR++  I+  ++  G++
Sbjct: 193  ---EKEIKESAPYLSTVCVYGGVSYNTQQSALSRGVDVVVGTPGRIIDLIEGRSLKLGEV 249

Query: 3590 KYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEF 3769
            +YLVLDEAD M   GF   +   L  L  +         Q++L +ATM   V+ L  +  
Sbjct: 250  EYLVLDEADQMLAVGFEEAVESILENLPSKR--------QSMLFSATMPSWVKKLARKYL 301

Query: 3770 QGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSR 3949
                ++      ++        + I        ++L  L    AKG + +VF  T   + 
Sbjct: 302  DNPLNIDLVGDREEKLAEGIKLYAIPATSTSKRTILSDLITVYAKGGKTIVFTQTKKDAD 361

Query: 3950 AVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHV 4126
             V   L+ + I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +
Sbjct: 362  EVSLALT-SSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLI 418

Query: 4127 IMFDFPLNSIDYLHRTGRTARMGAKG 4204
            I ++ P +   ++HR+GRT R G +G
Sbjct: 419  IHYELPNDPETFVHRSGRTGRAGKEG 444


>ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Cucumis sativus] gi|700210905|gb|KGN66001.1|
            hypothetical protein Csa_1G560830 [Cucumis sativus]
          Length = 748

 Score =  972 bits (2513), Expect = 0.0
 Identities = 519/703 (73%), Positives = 569/703 (80%), Gaps = 8/703 (1%)
 Frame = -2

Query: 2441 FSSSLRISFSRHCPCAIATPNSVLSEEAFKGL-GLSKDDADD---DYASETGREAASSED 2274
            FS S R + S     AIATPNS+LSEEAF+   G S+D  DD   D    +    A+ +D
Sbjct: 51   FSGSSRRNLSGFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDD 110

Query: 2273 NLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPI 2094
             LA+S L LPQ+L D LQKRGI +LFPIQRAVL+PALEGRD+IARAKTGTGKTLAFGIPI
Sbjct: 111  ELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI 170

Query: 2093 IKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNV 1914
            +K+LT DDE R+L RR+ RLPR+LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  
Sbjct: 171  LKKLTEDDESRSLRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYIT 229

Query: 1913 QQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKL 1734
            QQNALSRGVDVVVGTPGR+IDLIN  SL LGEV+YLVLDEADQMLAVGFEEDVEVILEKL
Sbjct: 230  QQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 289

Query: 1733 PSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTI 1554
            PS+RQ+MLFSATMP WVKKL+RKYLDNPLTIDLVGDQ+EKLAEGIKL+AI TTATSK+TI
Sbjct: 290  PSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 349

Query: 1553 LSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGK 1374
            L DL+TVYAKG KTIVFTQTKRDADEVS+AL+NSI SEALHGDISQHQRERTLNGFRQGK
Sbjct: 350  LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 409

Query: 1373 FTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRR 1194
            FTVLVATDVA+RGLDIPNVDL+IHYE+PNDPETFVHRSGRTGRAGKEG AILMFT+SQRR
Sbjct: 410  FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 469

Query: 1193 TVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGT 1014
            TV+SLERDVGC+FEF +PP +EEVL+SSAEQVV TL+GVHPESIEYF PTAQ+LI+EQG 
Sbjct: 470  TVRSLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGL 529

Query: 1013 DALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPR 834
             ALAAALA LSGF+ PPSSRSLINHEQGWVTLQLTR+P YSRGF SARSV GFLSDVY  
Sbjct: 530  GALAAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSP 589

Query: 833  AADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDN 654
            AADEIGKIHLIADE + GAVFDLPE+IAKELLN++ P GNTI KITKLP LQDDGP SDN
Sbjct: 590  AADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDN 649

Query: 653  Y----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXX 486
            Y                                           S+RT            
Sbjct: 650  YGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSG 709

Query: 485  XXWLIGNRRSNRPSSFGNRDRSFGGSCFNCGRSGHRASECPNK 357
              WLIG RRS+R SS    DR FGGSCFNCGR GHRASECP+K
Sbjct: 710  DDWLIGGRRSSRSSSV---DR-FGGSCFNCGRMGHRASECPDK 748



 Score =  151 bits (381), Expect = 5e-33
 Identities = 111/335 (33%), Positives = 178/335 (53%), Gaps = 3/335 (0%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCP 3388
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  D+    +  + R PR +VL P
Sbjct: 138  IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLPRVLVLTP 197

Query: 3389 TRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKD 3565
            TREL +QV    K I   A + +T+ V GG     Q+++L+  +D+VVGTPGR++  I  
Sbjct: 198  TRELAKQV---EKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLING 254

Query: 3566 GNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAV 3745
             ++  G+++YLVLDEAD M   GF  D+   L  L  +         Q +L +ATM   V
Sbjct: 255  NSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR--------QNMLFSATMPTWV 306

Query: 3746 QMLIDEEFQGIAHL-RTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMV 3922
            + L  +       +       +K+A        ++ A +K +++L+ L    AKG + +V
Sbjct: 307  KKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSK-QTILRDLVTVYAKGGKTIV 365

Query: 3923 FCNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARG 4102
            F  T   +  V   L+ N I +   HG++   +R   L  F+   G    LV TD+A+RG
Sbjct: 366  FTQTKRDADEVSLALA-NSITSEALHGDISQHQRERTLNGFR--QGKFTVLVATDVASRG 422

Query: 4103 LDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            LD+ +VD VI ++ P +   ++HR+GRT R G +G
Sbjct: 423  LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 457


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  971 bits (2509), Expect = 0.0
 Identities = 524/731 (71%), Positives = 575/731 (78%), Gaps = 24/731 (3%)
 Frame = -2

Query: 2480 KPCKFR-GFGHPFPFSSSLRISFSRHCPCAIATPNSVLSEEAFKGLG--------LSKDD 2328
            KP  FR G G  F F  SL        P AIATPN+VLSEEAFK LG        L    
Sbjct: 54   KPLGFRNGGGSGFGFKQSLTF-----VPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSV 108

Query: 2327 ADDDYASETGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDI 2148
            +D+DY S+T     S ED LA+S LGLP +L ++L+KRGI +LFPIQRAV  PAL+GRD+
Sbjct: 109  SDEDYESQT----VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDL 164

Query: 2147 IARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKE 1968
            IARAKTGTGKTLAFGIPI+KRLT   E +A+S R  RLP++LVLAPTRELA+QVEKEIKE
Sbjct: 165  IARAKTGTGKTLAFGIPILKRLTEGYE-QAISLRRSRLPKVLVLAPTRELARQVEKEIKE 223

Query: 1967 SAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEAD 1788
            SAPYL+TVCVYGGVSYN QQNALSRGVDVVVGTPGRIIDLIN+ SL LGEV+YLVLDEAD
Sbjct: 224  SAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEAD 283

Query: 1787 QMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLA 1608
            QMLAVGFEEDVE+ILE LP +RQSMLFSATMP WVKKLSRKYLDNPL IDLVG+Q+EKLA
Sbjct: 284  QMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 343

Query: 1607 EGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHG 1428
            EGIKLYAI TTATSKRTILSDLITVYAKG KTIVFTQTKRDADEVS+AL++ IASEALHG
Sbjct: 344  EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHG 403

Query: 1427 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTG 1248
            DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTG
Sbjct: 404  DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 463

Query: 1247 RAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPE 1068
            RAGKEG AILMFTSSQRRTV+SLERDVGC+FEF+SPP +E+VLESSAEQVVATL GVHPE
Sbjct: 464  RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 523

Query: 1067 SIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSR 888
            S+E+F PTAQRLIEE+GTDALAAALA LSGFS+PPSSRSLINHEQGWVTLQLTR+  +SR
Sbjct: 524  SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSR 583

Query: 887  GFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTI 708
            GF SARSVMGFLSDVYP AADEIGKIH+IAD+ VQGAVFDLPE+IAKELLN+Q PPGNTI
Sbjct: 584  GFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTI 643

Query: 707  SKITKLPALQDDGPASDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSY 528
            SKITKLP LQDDGP+SDNY                                        +
Sbjct: 644  SKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGF 703

Query: 527  RTEXXXXXXXXXXXXXWLIGNRRSNRPSSFGNRDRSFGGS---------------CFNCG 393
             +                 GN + +R S+  + D   GGS               CFNCG
Sbjct: 704  SSSRGGRSFRS--------GNNQGSRFSTSSDDDWLIGGSRSSRSSSRDRSFGGACFNCG 755

Query: 392  RSGHRASECPN 360
            RSGHRASECPN
Sbjct: 756  RSGHRASECPN 766



 Score =  147 bits (370), Expect = 1e-31
 Identities = 104/325 (32%), Positives = 168/325 (51%), Gaps = 2/325 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCPTRELCEQVF 3415
            L+ + ++  + TG+GKTLA+ +PI++ L         L + R P+ +VL PTREL  QV 
Sbjct: 159  LQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQV- 217

Query: 3416 RVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDIK 3592
               K I   A + +T+ V GG     Q+++L+  +D+VVGTPGR++  I + ++  G+++
Sbjct: 218  --EKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVE 275

Query: 3593 YLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEFQ 3772
            YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   V+ L  +   
Sbjct: 276  YLVLDEADQMLAVGFEEDVELILENLPPKR--------QSMLFSATMPSWVKKLSRKYLD 327

Query: 3773 GIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSRA 3952
               ++       +        + IS       ++L  L    AKG + +VF  T   +  
Sbjct: 328  NPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 387

Query: 3953 VDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHVI 4129
            V   L+ + I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +I
Sbjct: 388  VSLALT-SIIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLII 444

Query: 4130 MFDFPLNSIDYLHRTGRTARMGAKG 4204
             ++ P +   ++HR+GRT R G +G
Sbjct: 445  HYELPNDPETFVHRSGRTGRAGKEG 469


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  970 bits (2508), Expect = 0.0
 Identities = 524/732 (71%), Positives = 575/732 (78%), Gaps = 25/732 (3%)
 Frame = -2

Query: 2480 KPCKFR-GFGHPFPFSSSLRISFSRHCPCAIATPNSVLSEEAFKGLG--------LSKDD 2328
            KP  FR G G  F F  SL        P AIATPN+VLSEEAFK LG        L    
Sbjct: 54   KPLGFRNGGGSGFGFKQSLTF-----VPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSV 108

Query: 2327 ADDDYASETGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDI 2148
            +D+DY S+T     S ED LA+S LGLP +L ++L+KRGI +LFPIQRAV  PAL+GRD+
Sbjct: 109  SDEDYESQT----VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDL 164

Query: 2147 IARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKE 1968
            IARAKTGTGKTLAFGIPI+KRLT   E +A+S R  RLP++LVLAPTRELA+QVEKEIKE
Sbjct: 165  IARAKTGTGKTLAFGIPILKRLTEGYE-QAISLRRSRLPKVLVLAPTRELARQVEKEIKE 223

Query: 1967 SAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEAD 1788
            SAPYL+TVCVYGGVSYN QQNALSRGVDVVVGTPGRIIDLIN+ SL LGEV+YLVLDEAD
Sbjct: 224  SAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEAD 283

Query: 1787 QMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLA 1608
            QMLAVGFEEDVE+ILE LP +RQSMLFSATMP WVKKLSRKYLDNPL IDLVG+Q+EKLA
Sbjct: 284  QMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 343

Query: 1607 EGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHG 1428
            EGIKLYAI TTATSKRTILSDLITVYAKG KTIVFTQTKRDADEVS+AL++ IASEALHG
Sbjct: 344  EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHG 403

Query: 1427 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTG 1248
            DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTG
Sbjct: 404  DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 463

Query: 1247 RAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPE 1068
            RAGKEG AILMFTSSQRRTV+SLERDVGC+FEF+SPP +E+VLESSAEQVVATL GVHPE
Sbjct: 464  RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 523

Query: 1067 SIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSR 888
            S+E+F PTAQRLIEE+GTDALAAALA LSGFS+PPSSRSLINHEQGWVTLQLTR+  +SR
Sbjct: 524  SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSR 583

Query: 887  GFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTI 708
            GF SARSVMGFLSDVYP AADEIGKIH+IAD+ VQGAVFDLPE+IAKELLN+Q PPGNTI
Sbjct: 584  GFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTI 643

Query: 707  SKITKLPALQDDGPASDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSY 528
            SKITKLP LQDDGP+SDNY                                        +
Sbjct: 644  SKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGF 703

Query: 527  RTEXXXXXXXXXXXXXWLIGNRRSNRPSSFGNRDRSFGGS----------------CFNC 396
             +                 GN + +R S+  + D   GGS                CFNC
Sbjct: 704  SSSRGGRSFRS--------GNNQGSRFSTSSDDDWLIGGSRSSRSSSRDSRSFGGACFNC 755

Query: 395  GRSGHRASECPN 360
            GRSGHRASECPN
Sbjct: 756  GRSGHRASECPN 767



 Score =  147 bits (370), Expect = 1e-31
 Identities = 104/325 (32%), Positives = 168/325 (51%), Gaps = 2/325 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCPTRELCEQVF 3415
            L+ + ++  + TG+GKTLA+ +PI++ L         L + R P+ +VL PTREL  QV 
Sbjct: 159  LQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQV- 217

Query: 3416 RVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDIK 3592
               K I   A + +T+ V GG     Q+++L+  +D+VVGTPGR++  I + ++  G+++
Sbjct: 218  --EKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVE 275

Query: 3593 YLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEFQ 3772
            YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   V+ L  +   
Sbjct: 276  YLVLDEADQMLAVGFEEDVELILENLPPKR--------QSMLFSATMPSWVKKLSRKYLD 327

Query: 3773 GIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSRA 3952
               ++       +        + IS       ++L  L    AKG + +VF  T   +  
Sbjct: 328  NPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 387

Query: 3953 VDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHVI 4129
            V   L+ + I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +I
Sbjct: 388  VSLALT-SIIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLII 444

Query: 4130 MFDFPLNSIDYLHRTGRTARMGAKG 4204
             ++ P +   ++HR+GRT R G +G
Sbjct: 445  HYELPNDPETFVHRSGRTGRAGKEG 469


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 768

 Score =  970 bits (2507), Expect = 0.0
 Identities = 524/733 (71%), Positives = 575/733 (78%), Gaps = 26/733 (3%)
 Frame = -2

Query: 2480 KPCKFR-GFGHPFPFSSSLRISFSRHCPCAIATPNSVLSEEAFKGLG--------LSKDD 2328
            KP  FR G G  F F  SL        P AIATPN+VLSEEAFK LG        L    
Sbjct: 54   KPLGFRNGGGSGFGFKQSLTF-----VPSAIATPNTVLSEEAFKRLGEFSENSGSLDGSV 108

Query: 2327 ADDDYASETGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDI 2148
            +D+DY S+T     S ED LA+S LGLP +L ++L+KRGI +LFPIQRAV  PAL+GRD+
Sbjct: 109  SDEDYESQT----VSDEDELAISKLGLPGRLAESLEKRGITHLFPIQRAVFEPALQGRDL 164

Query: 2147 IARAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKE 1968
            IARAKTGTGKTLAFGIPI+KRLT   E +A+S R  RLP++LVLAPTRELA+QVEKEIKE
Sbjct: 165  IARAKTGTGKTLAFGIPILKRLTEGYE-QAISLRRSRLPKVLVLAPTRELARQVEKEIKE 223

Query: 1967 SAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEAD 1788
            SAPYL+TVCVYGGVSYN QQNALSRGVDVVVGTPGRIIDLIN+ SL LGEV+YLVLDEAD
Sbjct: 224  SAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEAD 283

Query: 1787 QMLAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLA 1608
            QMLAVGFEEDVE+ILE LP +RQSMLFSATMP WVKKLSRKYLDNPL IDLVG+Q+EKLA
Sbjct: 284  QMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLA 343

Query: 1607 EGIKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHG 1428
            EGIKLYAI TTATSKRTILSDLITVYAKG KTIVFTQTKRDADEVS+AL++ IASEALHG
Sbjct: 344  EGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHG 403

Query: 1427 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTG 1248
            DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYE+PNDPETFVHRSGRTG
Sbjct: 404  DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 463

Query: 1247 RAGKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPE 1068
            RAGKEG AILMFTSSQRRTV+SLERDVGC+FEF+SPP +E+VLESSAEQVVATL GVHPE
Sbjct: 464  RAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPE 523

Query: 1067 SIEYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSR 888
            S+E+F PTAQRLIEE+GTDALAAALA LSGFS+PPSSRSLINHEQGWVTLQLTR+  +SR
Sbjct: 524  SVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSR 583

Query: 887  GFFSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTI 708
            GF SARSVMGFLSDVYP AADEIGKIH+IAD+ VQGAVFDLPE+IAKELLN+Q PPGNTI
Sbjct: 584  GFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTI 643

Query: 707  SKITKLPALQDDGPASDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSY 528
            SKITKLP LQDDGP+SDNY                                        +
Sbjct: 644  SKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGF 703

Query: 527  RTEXXXXXXXXXXXXXWLIGNRRSNRPSSFGNRDRSFGGS-----------------CFN 399
             +                 GN + +R S+  + D   GGS                 CFN
Sbjct: 704  SSSRGGRSFRS--------GNNQGSRFSTSSDDDWLIGGSRSSRSSSRDSSRSFGGACFN 755

Query: 398  CGRSGHRASECPN 360
            CGRSGHRASECPN
Sbjct: 756  CGRSGHRASECPN 768



 Score =  147 bits (370), Expect = 1e-31
 Identities = 104/325 (32%), Positives = 168/325 (51%), Gaps = 2/325 (0%)
 Frame = +2

Query: 3236 LERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRRPRAVVLCPTRELCEQVF 3415
            L+ + ++  + TG+GKTLA+ +PI++ L         L + R P+ +VL PTREL  QV 
Sbjct: 159  LQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPKVLVLAPTRELARQV- 217

Query: 3416 RVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKDGNMVYGDIK 3592
               K I   A + +T+ V GG     Q+++L+  +D+VVGTPGR++  I + ++  G+++
Sbjct: 218  --EKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVE 275

Query: 3593 YLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAVQMLIDEEFQ 3772
            YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   V+ L  +   
Sbjct: 276  YLVLDEADQMLAVGFEEDVELILENLPPKR--------QSMLFSATMPSWVKKLSRKYLD 327

Query: 3773 GIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVFCNTLNSSRA 3952
               ++       +        + IS       ++L  L    AKG + +VF  T   +  
Sbjct: 328  NPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADE 387

Query: 3953 VDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVDHVI 4129
            V   L+ + I +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD +I
Sbjct: 388  VSLALT-SIIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLII 444

Query: 4130 MFDFPLNSIDYLHRTGRTARMGAKG 4204
             ++ P +   ++HR+GRT R G +G
Sbjct: 445  HYELPNDPETFVHRSGRTGRAGKEG 469


>ref|XP_010551750.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Tarenaya hassleriana]
          Length = 756

 Score =  968 bits (2502), Expect = 0.0
 Identities = 514/707 (72%), Positives = 568/707 (80%), Gaps = 9/707 (1%)
 Frame = -2

Query: 2441 FSSSLRISFSRHCPCAIATPNSVLSEEAFKGLGLSKDDAD-DDYASETGREAASSEDNLA 2265
            FSSS   S S   P A+ATPNSV SEEAFKGLGLS DD D D+   +   ++ +S D LA
Sbjct: 53   FSSS---SSSSLIPSAVATPNSVFSEEAFKGLGLSDDDHDHDENGLDVDDDSGTSSDELA 109

Query: 2264 VSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKR 2085
            VS LGLP++L D+L+KRGI +LFPIQRAVL PALEGRDIIARAKTGTGKTLAFGIPIIKR
Sbjct: 110  VSQLGLPERLADSLEKRGITHLFPIQRAVLHPALEGRDIIARAKTGTGKTLAFGIPIIKR 169

Query: 2084 LTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQN 1905
            LT D   ++  RR+GRLP++LVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYN QQ+
Sbjct: 170  LTEDAVDQSSFRRSGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNTQQS 229

Query: 1904 ALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSE 1725
            ALSRGVDVVVGTPGRIIDLI  KSL LGEV+YLVLDEADQMLAVGFEEDVE ILE LPS+
Sbjct: 230  ALSRGVDVVVGTPGRIIDLIEGKSLKLGEVEYLVLDEADQMLAVGFEEDVECILENLPSK 289

Query: 1724 RQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEGIKLYAIPTTATSKRTILSD 1545
            RQSMLFSATMP W+KKL+RKYLDNPL IDLVGDQ+EKLAEGIKL+AIP T+TSKRTILSD
Sbjct: 290  RQSMLFSATMPAWIKKLARKYLDNPLNIDLVGDQDEKLAEGIKLFAIPATSTSKRTILSD 349

Query: 1544 LITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTV 1365
            LITVYAKG KTIVFTQTK+DADEVS+ALSNSIASEALHGDISQHQRERTLNGFRQGKFTV
Sbjct: 350  LITVYAKGGKTIVFTQTKKDADEVSLALSNSIASEALHGDISQHQRERTLNGFRQGKFTV 409

Query: 1364 LVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVK 1185
            LVATDVA+RGLDIPNVDL+IHYE+PNDPETFVHRSGRTGRAGKEG AILMFTS+QRRTV+
Sbjct: 410  LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSNQRRTVR 469

Query: 1184 SLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDAL 1005
            SLE DVG +FEFISPP + EVLE+SAEQVVATL GVHPESIE+F  TAQRL EE+GT AL
Sbjct: 470  SLEHDVGSKFEFISPPSVGEVLEASAEQVVATLNGVHPESIEFFSATAQRLFEEKGTSAL 529

Query: 1004 AAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAAD 825
            AAALA LSGF+QPPSSRSLI+HEQGWVTLQLTR+   SRG+ S RSV GFLSDVY  AAD
Sbjct: 530  AAALAQLSGFAQPPSSRSLISHEQGWVTLQLTRDASNSRGYLSVRSVTGFLSDVYTAAAD 589

Query: 824  EIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASD---N 654
            E+GKI +IAD+ VQGAVFDLPEDIAKELL+++ PPGN+ISKITKLP LQDDGPASD    
Sbjct: 590  EVGKILMIADDRVQGAVFDLPEDIAKELLDKELPPGNSISKITKLPPLQDDGPASDFYGR 649

Query: 653  YXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYRTEXXXXXXXXXXXXXWL 474
            +                                         R                +
Sbjct: 650  FSGRDRMPRGGSRGGSSRGLQSGRGSRGWGGGRDSNNERERGRNNWSRLSRESSRDDWLI 709

Query: 473  IGNRRSNRPSS-----FGNRDRSFGGSCFNCGRSGHRASECPNKQDY 348
             G RRS+R SS     F +RDRS GG CF CGRSGHRA++CP  +DY
Sbjct: 710  SGGRRSSRSSSSSSSSFSSRDRSLGGPCFICGRSGHRAADCPGSKDY 756



 Score =  152 bits (385), Expect = 2e-33
 Identities = 109/335 (32%), Positives = 171/335 (51%), Gaps = 3/335 (0%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRR-PRAVVLC 3385
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  D +      +  R P+ +VL 
Sbjct: 134  IQRAVLHPALEGRDIIARAKTGTGKTLAFGIPIIKRLTEDAVDQSSFRRSGRLPKVLVLA 193

Query: 3386 PTRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIK 3562
            PTREL +QV    K I   A + ST+ V GG     Q+ +L+  +D+VVGTPGR++  I+
Sbjct: 194  PTRELAKQV---EKEIKESAPYLSTVCVYGGVSYNTQQSALSRGVDVVVGTPGRIIDLIE 250

Query: 3563 DGNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKA 3742
              ++  G+++YLVLDEAD M   GF  D+   L  L  +         Q++L +ATM   
Sbjct: 251  GKSLKLGEVEYLVLDEADQMLAVGFEEDVECILENLPSKR--------QSMLFSATMPAW 302

Query: 3743 VQMLIDEEFQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMV 3922
            ++ L  +      ++       +        F I        ++L  L    AKG + +V
Sbjct: 303  IKKLARKYLDNPLNIDLVGDQDEKLAEGIKLFAIPATSTSKRTILSDLITVYAKGGKTIV 362

Query: 3923 FCNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARG 4102
            F  T   +  V   LS N I +   HG++   +R   L  F+   G    LV TD+A+RG
Sbjct: 363  FTQTKKDADEVSLALS-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVASRG 419

Query: 4103 LDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            LD+ +VD VI ++ P +   ++HR+GRT R G +G
Sbjct: 420  LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 454


>ref|XP_010094933.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
            gi|587868209|gb|EXB57576.1| DEAD-box ATP-dependent RNA
            helicase 3 [Morus notabilis]
          Length = 810

 Score =  961 bits (2483), Expect = 0.0
 Identities = 506/617 (82%), Positives = 547/617 (88%), Gaps = 17/617 (2%)
 Frame = -2

Query: 2450 PFP----FSSSLRI------SFSRHCPCAIATPNSVLSEEAFKGLG-LSKD----DADDD 2316
            PFP    F+S LR       S SR    AIATPNSVLSEEAFKGLG  SKD    D +DD
Sbjct: 33   PFPDKSHFNSVLRAYNCKSGSSSRLVASAIATPNSVLSEEAFKGLGDFSKDSFSGDEEDD 92

Query: 2315 YASETGR--EAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIA 2142
            Y SE G   EA+  +D LA+S LGLPQ+LVD+L+KRGI +LFPIQRAVL+PALEGRD+IA
Sbjct: 93   YESEEGEPGEASVDDDELAISKLGLPQRLVDSLEKRGITHLFPIQRAVLVPALEGRDLIA 152

Query: 2141 RAKTGTGKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESA 1962
            RAKTGTGKTLAFGIPIIKRLT DDE R   RR+ RLP+ LVLAPTRELAKQVEKEIKESA
Sbjct: 153  RAKTGTGKTLAFGIPIIKRLTEDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKEIKESA 212

Query: 1961 PYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQM 1782
            P+L+TVCVYGGVSY  QQNALSRGVDVVVGTPGR+IDLIN  SL LGEVQYLVLDEADQM
Sbjct: 213  PHLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLDEADQM 272

Query: 1781 LAVGFEEDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDLVGDQEEKLAEG 1602
            LAVGFEEDVEVILEKLPSERQSMLFSATMP WVKKL+RKYLDNPLTIDLVG+++EKLAEG
Sbjct: 273  LAVGFEEDVEVILEKLPSERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGERDEKLAEG 332

Query: 1601 IKLYAIPTTATSKRTILSDLITVYAKGEKTIVFTQTKRDADEVSMALSNSIASEALHGDI 1422
            IKLYAI TTATSKRTILSDL+TVYAKG KTIVFTQTKRDADEVSMAL+NSIASEALHGDI
Sbjct: 333  IKLYAISTTATSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDI 392

Query: 1421 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEMPNDPETFVHRSGRTGRA 1242
            SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL+IHYE+PNDPETFVHRSGRTGRA
Sbjct: 393  SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRA 452

Query: 1241 GKEGVAILMFTSSQRRTVKSLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESI 1062
            GKEG AILMFTSSQRRTV+SLERDVGC+FEF+SPP IEEVLESSAE VVATL GVH ES+
Sbjct: 453  GKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGVHAESV 512

Query: 1061 EYFVPTAQRLIEEQGTDALAAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGF 882
            E+F PTAQ+LIEEQGT ALAAALA LSGF++PPSSRSLINHEQG VTLQL R+P +SRGF
Sbjct: 513  EFFTPTAQKLIEEQGTSALAAALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPAFSRGF 572

Query: 881  FSARSVMGFLSDVYPRAADEIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISK 702
             SARSV GFLSDVY  AADE+GK++L+ADE VQ AVFDLPE+IAKELLN++ P GNTISK
Sbjct: 573  LSARSVTGFLSDVYSAAADELGKVYLVADERVQSAVFDLPEEIAKELLNRELPSGNTISK 632

Query: 701  ITKLPALQDDGPASDNY 651
            ITKLP LQDDGPASD Y
Sbjct: 633  ITKLPPLQDDGPASDYY 649



 Score =  155 bits (393), Expect = 2e-34
 Identities = 110/334 (32%), Positives = 173/334 (51%), Gaps = 2/334 (0%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHDELLYGMLMKPRR-PRAVVLC 3385
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  D+   G   +  R P+ +VL 
Sbjct: 136  IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLTEDDEQRGSRRRSSRLPKGLVLA 195

Query: 3386 PTRELCEQVFRVAKSISHHARFRSTMVSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIKD 3565
            PTREL +QV +  K  + H    +  V GG     Q+++L+  +D+VVGTPGR++  I  
Sbjct: 196  PTRELAKQVEKEIKESAPH--LNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLING 253

Query: 3566 GNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKAV 3745
            G++  G+++YLVLDEAD M   GF  D+   L  L      P ++  Q++L +ATM   V
Sbjct: 254  GSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKL------PSER--QSMLFSATMPSWV 305

Query: 3746 QMLIDEEFQGIAHLRTSTLHKKIATARHDFFKISGAENKLESLLQVLEPSLAKGNRVMVF 3925
            + L  +       +       +        + IS       ++L  L    AKG + +VF
Sbjct: 306  KKLARKYLDNPLTIDLVGERDEKLAEGIKLYAISTTATSKRTILSDLVTVYAKGGKTIVF 365

Query: 3926 CNTLNSSRAVDHFLSENQILTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGL 4105
              T   +  V   L+ N I +   HG++   +R   L  F+   G    LV TD+AARGL
Sbjct: 366  TQTKRDADEVSMALT-NSIASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGL 422

Query: 4106 DL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKG 4204
            D+ +VD VI ++ P +   ++HR+GRT R G +G
Sbjct: 423  DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 456



 Score = 63.5 bits (153), Expect = 2e-06
 Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 5/45 (11%)
 Frame = -2

Query: 476 LIGNRRSNRPSSFGN-----RDRSFGGSCFNCGRSGHRASECPNK 357
           LIG R+S    S G+     RDRSFGGSCFNCGRSGHRASECP+K
Sbjct: 733 LIGGRKSGSSWSQGSSRSSSRDRSFGGSCFNCGRSGHRASECPDK 777


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  959 bits (2478), Expect = 0.0
 Identities = 530/718 (73%), Positives = 568/718 (79%), Gaps = 56/718 (7%)
 Frame = -2

Query: 2636 MSSIIAGISSFHHQSPSPTPCLELSKRTXXXXXXXXXXLQKFPXXXXXXXXLKPCKFRGF 2457
            M+S I G+SS +      T  LELS+RT           +                F+  
Sbjct: 1    MASSIIGVSSVYQ-----TTALELSRRTSAHSLSLPFSDKTHLGV-----------FKAP 44

Query: 2456 GHPFPFSSSLRISFSR---HCPCAIATPNSVLSEEAFKGLG-LSKD-----DADDDYASE 2304
                   +SLR SF +     P AIATPNSVLSEEAFKGLG  SKD     D DDDY  E
Sbjct: 45   NTRVLSDASLRRSFKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPE 104

Query: 2303 TGREAASSEDNLAVSDLGLPQQLVDTLQKRGINNLFPIQRAVLIPALEGRDIIARAKTGT 2124
                AA+ ED LA++ LGLP +LV++L++RGI +LFPIQRAVL+PALEGRD+IARAKTGT
Sbjct: 105  IEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGT 164

Query: 2123 GKTLAFGIPIIKRLTVDDEGRALSRRAGRLPRLLVLAPTRELAKQVEKEIKESAPYLSTV 1944
            GKTLAFGIPIIKRL+ DDE R   RR+GRLPR+LVLAPTRELAKQVEKEIKESAPYLSTV
Sbjct: 165  GKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTV 224

Query: 1943 CVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINSKSLLLGEVQYLVLDEADQMLAVGFE 1764
            CVYGGVSY  QQNALSRGVDVVVGTPGRIIDLI   SL LGEVQ LVLDEADQMLAVGFE
Sbjct: 225  CVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFE 284

Query: 1763 EDVEVILEKLPSERQSMLFSATMPGWVKKLSRKYLDNPLTIDL----------------- 1635
            EDVEVILEKLPSERQSMLFSATMP WVKKL+RKYLDNPLTIDL                 
Sbjct: 285  EDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDLGNFCPHWGLNLEPPKNP 344

Query: 1634 ------VGDQEEKLAEGIKLYAIPTTATSKRTILSDLIT---------------VYAKGE 1518
                  VGD +EKLAEGIKLYAIPTTATSKRTILSDLIT               VYAKG 
Sbjct: 345  PQTLDHVGDHDEKLAEGIKLYAIPTTATSKRTILSDLITKNIVKDRGGFQYGHKVYAKGG 404

Query: 1517 KTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 1338
            KTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR
Sbjct: 405  KTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAAR 464

Query: 1337 GLDIPNVDL---------IIHYEMPNDPETFVHRSGRTGRAGKEGVAILMFTSSQRRTVK 1185
            GLDIPNVDL         IIHYE+PNDPETFVHRSGRTGRAGKEG AILMFTSSQRRTVK
Sbjct: 465  GLDIPNVDLKYVDLLFLQIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVK 524

Query: 1184 SLERDVGCRFEFISPPQIEEVLESSAEQVVATLKGVHPESIEYFVPTAQRLIEEQGTDAL 1005
            SLERDVGC+FEFISPP IEEVLESSAEQVVATL GVHPES+E+F PTAQ+LIEE+GT AL
Sbjct: 525  SLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIEEKGTGAL 584

Query: 1004 AAALAHLSGFSQPPSSRSLINHEQGWVTLQLTREPGYSRGFFSARSVMGFLSDVYPRAAD 825
            AAALAHLSGFSQPPS RSLI+HEQGWVTLQLTR+ GYSRGF SARSV GFLSDVYP AAD
Sbjct: 585  AAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYPTAAD 644

Query: 824  EIGKIHLIADEEVQGAVFDLPEDIAKELLNQQTPPGNTISKITKLPALQDDGPASDNY 651
            E+GKI+L+ADE VQGAVFDLPE+IAKELLN+Q PPGNTISKITKLPALQDDGPA D Y
Sbjct: 645  ELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITKLPALQDDGPAGDYY 702



 Score =  127 bits (318), Expect = 1e-25
 Identities = 114/384 (29%), Positives = 180/384 (46%), Gaps = 52/384 (13%)
 Frame = +2

Query: 3209 IQCLGIPSVLERKSVVLGSHTGSGKTLAYMLPIVQLLRHD-ELLYGMLMKPRRPRAVVLC 3385
            IQ   +   LE + ++  + TG+GKTLA+ +PI++ L  D E         R PR +VL 
Sbjct: 142  IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLA 201

Query: 3386 PTRELCEQVFRVAKSISHHARFRSTM-VSGGSRMRPQEDSLNVPIDMVVGTPGRVLQHIK 3562
            PTREL +QV    K I   A + ST+ V GG     Q+++L+  +D+VVGTPGR++  IK
Sbjct: 202  PTRELAKQV---EKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIK 258

Query: 3563 DGNMVYGDIKYLVLDEADTMFDQGFGPDIRQFLGPLKHRASKPDDQGYQTVLVTATMTKA 3742
              ++  G+++ LVLDEAD M   GF  D+   L  L      P ++  Q++L +ATM   
Sbjct: 259  GNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKL------PSER--QSMLFSATMPAW 310

Query: 3743 VQMLIDEEF--------------------------QGIAHLRTSTLHKKIATARHDFFKI 3844
            V+ L  +                            Q + H+      +K+A     +   
Sbjct: 311  VKKLARKYLDNPLTIDLGNFCPHWGLNLEPPKNPPQTLDHV--GDHDEKLAEGIKLYAIP 368

Query: 3845 SGAENKLESLLQVLEPSLAK--------------GNRVMVFCNTLNSSRAVDHFLSENQI 3982
            + A +K   L  ++  ++ K              G + +VF  T   +  V   L+ N I
Sbjct: 369  TTATSKRTILSDLITKNIVKDRGGFQYGHKVYAKGGKTIVFTQTKRDADEVSMALT-NSI 427

Query: 3983 LTVNYHGEVPAEKRVENLKKFKSEDGDCPTLVCTDLAARGLDL-DVD---------HVIM 4132
             +   HG++   +R   L  F+   G    LV TD+AARGLD+ +VD          +I 
Sbjct: 428  ASEALHGDISQHQRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLKYVDLLFLQIIH 485

Query: 4133 FDFPLNSIDYLHRTGRTARMGAKG 4204
            ++ P +   ++HR+GRT R G +G
Sbjct: 486  YELPNDPETFVHRSGRTGRAGKEG 509