BLASTX nr result

ID: Cinnamomum24_contig00036325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00036325
         (278 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008783094.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    84   4e-14
ref|XP_010928987.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    82   1e-13
ref|XP_010246311.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    70   8e-10
ref|XP_010246310.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    70   8e-10
ref|XP_009398766.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    62   1e-07
ref|XP_008375082.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    57   5e-06

>ref|XP_008783094.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like [Phoenix dactylifera]
          Length = 624

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 50/80 (62%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
 Frame = -3

Query: 228 VCDSPPVPTMSS-KIRPVSEFRSSMPEADLLPTMSARRLGEGSL----GETHDPCRVSAS 64
           +CDSPP+P  SS + R VS+ RSSMPEADLLPTMSARR  EGS     G     CR  AS
Sbjct: 314 LCDSPPLPGHSSCRARSVSDLRSSMPEADLLPTMSARRAAEGSSSRQDGGEDSSCR--AS 371

Query: 63  SP-CYRSLNAALSSCQQSFS 7
           +P CYRSLN ALSSCQQ+ +
Sbjct: 372 NPLCYRSLNLALSSCQQNLN 391


>ref|XP_010928987.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like [Elaeis guineensis]
          Length = 611

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 6/77 (7%)
 Frame = -3

Query: 228 VCDSPPVPTMSS-KIRPVSEFRSSMPEADLLPTMSARRLGEGSLGET---HDP-CRVSAS 64
           +C+SPP+P+ ++ + RPVSE RSSMPEADLLPTMSARR  EGS G      DP CR  AS
Sbjct: 292 LCESPPLPSHNNCRGRPVSELRSSMPEADLLPTMSARRAVEGSSGRQDCGQDPSCR--AS 349

Query: 63  SP-CYRSLNAALSSCQQ 16
           +P CYRSLN ALSSC Q
Sbjct: 350 NPLCYRSLNMALSSCPQ 366


>ref|XP_010246311.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like isoform X2 [Nelumbo
           nucifera]
          Length = 585

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = -3

Query: 228 VCDSPPVPTMSSKIRPVSEFRSSMPEADLLPTMSARRLGEGSL----GETHDPCRVSASS 61
           +C SPP+P  +SKIR + + R SMPEADLLP MS+R +   +     G+      +S++S
Sbjct: 257 MCSSPPIPPQNSKIRCLPDVRLSMPEADLLPAMSSRLVAGRNFKQRDGDVVGDSCISSAS 316

Query: 60  PCYRSLNAALSSC 22
           PCYRSLN  LS C
Sbjct: 317 PCYRSLNTPLSGC 329


>ref|XP_010246310.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like isoform X1 [Nelumbo
           nucifera]
          Length = 590

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = -3

Query: 228 VCDSPPVPTMSSKIRPVSEFRSSMPEADLLPTMSARRLGEGSL----GETHDPCRVSASS 61
           +C SPP+P  +SKIR + + R SMPEADLLP MS+R +   +     G+      +S++S
Sbjct: 257 MCSSPPIPPQNSKIRCLPDVRLSMPEADLLPAMSSRLVAGRNFKQRDGDVVGDSCISSAS 316

Query: 60  PCYRSLNAALSSC 22
           PCYRSLN  LS C
Sbjct: 317 PCYRSLNTPLSGC 329


>ref|XP_009398766.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like [Musa acuminata
           subsp. malaccensis]
          Length = 543

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
 Frame = -3

Query: 228 VCDSPPV-PTMSSKIRPVSEFRSSMPEADLLPTMSARRLGEG----SLGETHDPCRVSAS 64
           +CDSPP+ P  S + RPV+E RSSMPEADLL   SARR  E       G     CR S S
Sbjct: 223 LCDSPPLLPPASCRSRPVAEVRSSMPEADLL---SARRATEACSSRQTGAEDSACRASTS 279

Query: 63  SPCYRSLNAALSSCQQ 16
           S C RSL  A+S  QQ
Sbjct: 280 SFCLRSLTPAMSCRQQ 295


>ref|XP_008375082.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like [Malus domestica]
          Length = 329

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
 Frame = -3

Query: 204 TMSSKIRPVSEFRSSMPEADLLPTMSARRLGEGSLGE---THDPCRVSASSPCYRSLNAA 34
           T SS  R + + RSSMPEADLLPT+S+R+L E S      T D  + SA SPC RSLN +
Sbjct: 53  TPSSTARCLPDIRSSMPEADLLPTVSSRQLVEKSSSRGNATGDFSKYSA-SPCSRSLNLS 111

Query: 33  LSSCQQSF 10
           LSS   SF
Sbjct: 112 LSSSDSSF 119


Top