BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00036297
         (263 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011030060.1| PREDICTED: DNA-directed RNA polymerases II, ...    61   3e-07
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu...    61   3e-07
ref|XP_012090303.1| PREDICTED: DNA-directed RNA polymerases II, ...    59   1e-06
ref|XP_008466421.1| PREDICTED: DNA-directed RNA polymerases II, ...    59   1e-06
ref|XP_008386880.1| PREDICTED: DNA-directed RNA polymerases II, ...    59   1e-06
ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases II, ...    59   1e-06
ref|XP_009343039.1| PREDICTED: DNA-directed RNA polymerases II, ...    58   3e-06
gb|KDP22319.1| hypothetical protein JCGZ_26150 [Jatropha curcas]       57   5e-06
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...    57   7e-06
ref|XP_003625191.1| DNA-directed RNA polymerase I, II [Medicago ...    57   7e-06
gb|ACJ84175.1| unknown [Medicago truncatula]                           56   9e-06
ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases II, ...    56   9e-06
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ...    56   9e-06

>ref|XP_011030060.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
           [Populus euphratica]
          Length = 143

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/72 (47%), Positives = 39/72 (54%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MAD+DYND  +GY                             GEP+ETE+KE+QE  ERP
Sbjct: 1   MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNDVDDK---GEPIETEDKEEQEPVERP 57

Query: 38  RKTSKFMTKYER 3
           RKTSKFMTKYER
Sbjct: 58  RKTSKFMTKYER 69


>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
           gi|550327061|gb|EEE96460.2| hypothetical protein
           POPTR_0012s13610g [Populus trichocarpa]
          Length = 183

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/72 (47%), Positives = 39/72 (54%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MAD+DYND  +GY                             GEP+ETE+KE+QE  ERP
Sbjct: 41  MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDK---GEPIETEDKEEQEPVERP 97

Query: 38  RKTSKFMTKYER 3
           RKTSKFMTKYER
Sbjct: 98  RKTSKFMTKYER 109


>ref|XP_012090303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
           [Jatropha curcas]
          Length = 142

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/72 (47%), Positives = 38/72 (52%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDY D + GY                             GEP+ETE+KEDQE  ERP
Sbjct: 1   MADDDYMDELPGYEDEPEPEIEEGIEEDVENNNNEDAP----GEPIETEDKEDQEPVERP 56

Query: 38  RKTSKFMTKYER 3
           RKTSK+MTKYER
Sbjct: 57  RKTSKYMTKYER 68


>ref|XP_008466421.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Cucumis melo]
          Length = 217

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/73 (46%), Positives = 38/73 (52%)
 Frame = -1

Query: 221 TMADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAER 42
           +MADDDYND  +GY                             GEP+E EEKED+E  ER
Sbjct: 75  SMADDDYNDLDMGYEDEPPEPEIEEGAEEELDTNNDDVP----GEPVEAEEKEDEEPVER 130

Query: 41  PRKTSKFMTKYER 3
            RKTSKFMTKYER
Sbjct: 131 VRKTSKFMTKYER 143


>ref|XP_008386880.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Malus domestica]
          Length = 145

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/72 (45%), Positives = 38/72 (52%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDYND  +GY                             G+P+E EEKE+QE  ERP
Sbjct: 1   MADDDYNDVDMGYQDEPPEPEIEEGAEEEDVDNLNNDDDVA-GDPIEAEEKEEQEGVERP 59

Query: 38  RKTSKFMTKYER 3
           RKTSK+MTKYER
Sbjct: 60  RKTSKYMTKYER 71


>ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Cicer arietinum]
          Length = 145

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/72 (44%), Positives = 38/72 (52%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDY D  +GY                             GEP+ETE+KED++  ERP
Sbjct: 1   MADDDYEDIDMGYEEEPPEPEIEEGAEEEDLENKNDDMTGE-GEPIETEDKEDEQPGERP 59

Query: 38  RKTSKFMTKYER 3
           RKTSK+MTKYER
Sbjct: 60  RKTSKYMTKYER 71


>ref|XP_009343039.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Pyrus x bretschneideri]
          Length = 145

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/72 (44%), Positives = 38/72 (52%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDYND  +GY                             G+P+E EEKE+QE  E+P
Sbjct: 1   MADDDYNDVDMGYQDEPPEPEIEEGAEEEDVDNLNNDDDVA-GDPIEAEEKEEQEGVEQP 59

Query: 38  RKTSKFMTKYER 3
           RKTSK+MTKYER
Sbjct: 60  RKTSKYMTKYER 71


>gb|KDP22319.1| hypothetical protein JCGZ_26150 [Jatropha curcas]
          Length = 149

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -1

Query: 92  GEPLETEEKEDQELAERPRKTSKFMTKYER 3
           GEP+ETE+KEDQE  ERPRKTSK+MTKYER
Sbjct: 46  GEPIETEDKEDQEPVERPRKTSKYMTKYER 75


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -1

Query: 92  GEPLETEEKEDQELAERPRKTSKFMTKYER 3
           G+P+ETE+KE+QE AERPRKTSK+MTKYER
Sbjct: 21  GDPIETEDKEEQEAAERPRKTSKYMTKYER 50


>ref|XP_003625191.1| DNA-directed RNA polymerase I, II [Medicago truncatula]
           gi|124360124|gb|ABN08140.1| DNA-directed RNA polymerase,
           14 to 18 kDa subunit [Medicago truncatula]
           gi|355500206|gb|AES81409.1| DNA-directed RNA polymerase
           I, II [Medicago truncatula] gi|388508874|gb|AFK42503.1|
           unknown [Medicago truncatula]
           gi|388517849|gb|AFK46986.1| unknown [Medicago
           truncatula]
          Length = 145

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 32/72 (44%), Positives = 36/72 (50%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDY D  +GY                             GEP+ETEEKED    ERP
Sbjct: 1   MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAE-GEPIETEEKEDAAPVERP 59

Query: 38  RKTSKFMTKYER 3
           R+TSK+MTKYER
Sbjct: 60  RRTSKYMTKYER 71


>gb|ACJ84175.1| unknown [Medicago truncatula]
          Length = 145

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/72 (44%), Positives = 36/72 (50%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDY D  +GY                             GEP+ETEEKED    ERP
Sbjct: 1   MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAE-GEPIETEEKEDVAPVERP 59

Query: 38  RKTSKFMTKYER 3
           R+TSK+MTKYER
Sbjct: 60  RRTSKYMTKYER 71


>ref|XP_004136357.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
           [Cucumis sativus] gi|700204956|gb|KGN60089.1|
           hypothetical protein Csa_3G877600 [Cucumis sativus]
          Length = 142

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/72 (45%), Positives = 36/72 (50%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDYND  +GY                             GEP+E E KED+E  ER 
Sbjct: 1   MADDDYNDLDMGYEDEPPEPEIEEGAEEELDTNTDDVP----GEPVEAEGKEDEEPVERV 56

Query: 38  RKTSKFMTKYER 3
           RKTSKFMTKYER
Sbjct: 57  RKTSKFMTKYER 68


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Glycine max] gi|734317895|gb|KHN02801.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 [Glycine soja] gi|947086645|gb|KRH35366.1|
           hypothetical protein GLYMA_10G238600 [Glycine max]
          Length = 142

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 30/72 (41%), Positives = 38/72 (52%)
 Frame = -1

Query: 218 MADDDYNDFVIGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGEPLETEEKEDQELAERP 39
           MADDDY D  +GY                             GEP++TE+KE+++  ERP
Sbjct: 1   MADDDYEDIDMGYEDEPPEPEIEEGAEEDLENKNDELT----GEPIDTEDKEEEQPVERP 56

Query: 38  RKTSKFMTKYER 3
           RKTSK+MTKYER
Sbjct: 57  RKTSKYMTKYER 68