BLASTX nr result

ID: Cinnamomum24_contig00035217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00035217
         (491 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004303558.1| PREDICTED: F-box protein SNE [Fragaria vesca...    61   4e-07
ref|XP_006447769.1| hypothetical protein CICLE_v10016961mg [Citr...    57   7e-06
ref|XP_012490322.1| PREDICTED: F-box protein SNE-like [Gossypium...    56   9e-06
ref|XP_012490308.1| PREDICTED: F-box protein SNE [Gossypium raim...    56   9e-06
ref|XP_008229907.1| PREDICTED: F-box protein SNE [Prunus mume]         56   9e-06
ref|XP_007215102.1| hypothetical protein PRUPE_ppa012743mg [Prun...    56   9e-06

>ref|XP_004303558.1| PREDICTED: F-box protein SNE [Fragaria vesca subsp. vesca]
          Length = 149

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
 Frame = +1

Query: 1   LRPVVLAMGGHRTLYTACVRPVLHR------PLRSW--DEVQLSLSLLSVDCYERRLIXX 156
           +RPVV+A+GG++ LY  CVRPVL R        R W  DEVQLSLSL  VD YERRL   
Sbjct: 73  VRPVVVALGGYKRLYMVCVRPVLSRLSDSDLVRRVWTRDEVQLSLSLFCVDYYERRL--- 129

Query: 157 XXXXXXXXXXXXXXXXLSFLCDPI 228
                           L FLC+P+
Sbjct: 130 ------GGGEASASSSLMFLCNPV 147


>ref|XP_006447769.1| hypothetical protein CICLE_v10016961mg [Citrus clementina]
           gi|568830423|ref|XP_006469499.1| PREDICTED: F-box
           protein SNE-like [Citrus sinensis]
           gi|557550380|gb|ESR61009.1| hypothetical protein
           CICLE_v10016961mg [Citrus clementina]
          Length = 170

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 12/59 (20%)
 Frame = +1

Query: 1   LRPVVLAMGGHRTLYTACVRPVL----------HRPLRSW--DEVQLSLSLLSVDCYER 141
           +RPVVLA+GG++ LY  C++PVL          HR  R+W  DE+QLSLSL  VD YER
Sbjct: 79  VRPVVLALGGYKRLYMVCLQPVLSRLGLAELNSHRVKRTWTRDELQLSLSLFCVDYYER 137


>ref|XP_012490322.1| PREDICTED: F-box protein SNE-like [Gossypium raimondii]
           gi|763743253|gb|KJB10752.1| hypothetical protein
           B456_001G221300 [Gossypium raimondii]
          Length = 159

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
 Frame = +1

Query: 1   LRPVVLAMGGHRTLYTACVRPVLHRPLR----SW--DEVQLSLSLLSVDCYER 141
           +R VVLA+GG++ LYT CVRPV  R  R    SW  DEVQLSLSL  VD YER
Sbjct: 79  VRSVVLALGGYKRLYTGCVRPVRSRLGRVRRASWAGDEVQLSLSLFCVDYYER 131


>ref|XP_012490308.1| PREDICTED: F-box protein SNE [Gossypium raimondii]
           gi|763743252|gb|KJB10751.1| hypothetical protein
           B456_001G221200 [Gossypium raimondii]
          Length = 159

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
 Frame = +1

Query: 1   LRPVVLAMGGHRTLYTACVRPVLHRPLR----SW--DEVQLSLSLLSVDCYER 141
           +R VVLA+GG++ LYT CVRPV  R  R    SW  DEVQLSLSL  VD YER
Sbjct: 79  VRSVVLALGGYKRLYTGCVRPVRSRLGRMRKASWAGDEVQLSLSLFCVDYYER 131


>ref|XP_008229907.1| PREDICTED: F-box protein SNE [Prunus mume]
          Length = 169

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 8/55 (14%)
 Frame = +1

Query: 1   LRPVVLAMGGHRTLYTACVRPVLHR------PLRSW--DEVQLSLSLLSVDCYER 141
           +RPVV+A+GG++ LY  CVRPVL R        R W  DEVQLSLSL  VD YER
Sbjct: 86  VRPVVVALGGYKRLYRVCVRPVLSRLSDSDLVRRVWTRDEVQLSLSLFCVDYYER 140


>ref|XP_007215102.1| hypothetical protein PRUPE_ppa012743mg [Prunus persica]
           gi|462411252|gb|EMJ16301.1| hypothetical protein
           PRUPE_ppa012743mg [Prunus persica]
          Length = 156

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 8/55 (14%)
 Frame = +1

Query: 1   LRPVVLAMGGHRTLYTACVRPVLHR------PLRSW--DEVQLSLSLLSVDCYER 141
           +RPVV+A+GG++ LY  CVRPVL R        R W  DEVQLSLSL  VD YER
Sbjct: 75  VRPVVVALGGYKRLYRVCVRPVLSRLSDSDLVRRVWTRDEVQLSLSLFCVDYYER 129


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