BLASTX nr result

ID: Cinnamomum24_contig00034889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00034889
         (243 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009391177.1| PREDICTED: high mobility group B protein 9-l...    67   4e-09
ref|XP_009406430.1| PREDICTED: high mobility group B protein 9-l...    62   1e-07
ref|XP_011629069.1| PREDICTED: high mobility group B protein 9 [...    57   7e-06
gb|ERM96293.1| hypothetical protein AMTR_s00001p00177580 [Ambore...    57   7e-06

>ref|XP_009391177.1| PREDICTED: high mobility group B protein 9-like [Musa acuminata
           subsp. malaccensis]
          Length = 352

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 33/45 (73%), Positives = 36/45 (80%)
 Frame = -1

Query: 243 LTQEEKMKYNACGLKDKERYKREMQEYKERMKLVQHKEAARASPS 109
           L +EE+M Y   GLKDKERYKREMQEYKER+KLVQ KE A A PS
Sbjct: 293 LNEEERMVYQNYGLKDKERYKREMQEYKERLKLVQPKEMAGAEPS 337


>ref|XP_009406430.1| PREDICTED: high mobility group B protein 9-like [Musa acuminata
           subsp. malaccensis]
          Length = 350

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = -1

Query: 243 LTQEEKMKYNACGLKDKERYKREMQEYKERMKLVQHKE--AARASPSS 106
           L++EE++ Y   GLKDKERYK EMQEYKER+KL Q KE   ARA PSS
Sbjct: 289 LSEEERLVYQDYGLKDKERYKMEMQEYKERLKLAQPKEVTVARAEPSS 336


>ref|XP_011629069.1| PREDICTED: high mobility group B protein 9 [Amborella trichopoda]
          Length = 328

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 23/35 (65%), Positives = 32/35 (91%)
 Frame = -1

Query: 243 LTQEEKMKYNACGLKDKERYKREMQEYKERMKLVQ 139
           LT+EE++ Y  CGL+DKERY+REMQEY+ER+KL++
Sbjct: 252 LTEEERLVYQDCGLQDKERYRREMQEYRERLKLLR 286


>gb|ERM96293.1| hypothetical protein AMTR_s00001p00177580 [Amborella trichopoda]
          Length = 367

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 23/35 (65%), Positives = 32/35 (91%)
 Frame = -1

Query: 243 LTQEEKMKYNACGLKDKERYKREMQEYKERMKLVQ 139
           LT+EE++ Y  CGL+DKERY+REMQEY+ER+KL++
Sbjct: 291 LTEEERLVYQDCGLQDKERYRREMQEYRERLKLLR 325


Top