BLASTX nr result
ID: Cinnamomum24_contig00034774
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00034774
(320 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 137 3e-30
ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 137 3e-30
ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 137 3e-30
emb|CBI37517.3| unnamed protein product [Vitis vinifera] 137 3e-30
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca... 132 8e-29
gb|KHG06666.1| DNA topoisomerase 3-alpha [Gossypium arboreum] 131 2e-28
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer ... 131 2e-28
ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 130 3e-28
ref|XP_012489368.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 130 3e-28
ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 130 3e-28
ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 130 3e-28
ref|XP_009622051.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 128 1e-27
ref|XP_009622050.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 128 1e-27
ref|XP_009622049.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 128 1e-27
ref|XP_011652135.1| PREDICTED: DNA topoisomerase 3-alpha [Cucumi... 126 5e-27
ref|XP_008394176.1| PREDICTED: DNA-binding protein HEXBP-like [M... 124 4e-26
ref|XP_007214290.1| hypothetical protein PRUPE_ppb010436mg [Prun... 124 4e-26
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 123 5e-26
ref|XP_008443145.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 123 6e-26
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 123 6e-26
>ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Vitis vinifera]
Length = 916
Score = 137 bits (345), Expect = 3e-30
Identities = 64/114 (56%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
Frame = -3
Query: 315 TRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
TRQ+AC+HC QTGHSSNDCPS++ SR SQ R ++ + +++ CN CG PCI RTANT
Sbjct: 755 TRQTACIHCSQTGHSSNDCPSRVPRSRNSQ-SHRTNMPSGESSIPCNVCGTPCILRTANT 813
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGG---------GGACSPPSRGSRG 1
NNRGRKFY CQ +ECNFFVWEDS+ N+ +GG A +P RG RG
Sbjct: 814 ENNRGRKFYSCQSQECNFFVWEDSL-NSSSGGRSAQPATARSSASNPSRRGGRG 866
>ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vitis vinifera]
Length = 918
Score = 137 bits (345), Expect = 3e-30
Identities = 64/114 (56%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
Frame = -3
Query: 315 TRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
TRQ+AC+HC QTGHSSNDCPS++ SR SQ R ++ + +++ CN CG PCI RTANT
Sbjct: 757 TRQTACIHCSQTGHSSNDCPSRVPRSRNSQ-SHRTNMPSGESSIPCNVCGTPCILRTANT 815
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGG---------GGACSPPSRGSRG 1
NNRGRKFY CQ +ECNFFVWEDS+ N+ +GG A +P RG RG
Sbjct: 816 ENNRGRKFYSCQSQECNFFVWEDSL-NSSSGGRSAQPATARSSASNPSRRGGRG 868
>ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vitis vinifera]
Length = 919
Score = 137 bits (345), Expect = 3e-30
Identities = 64/114 (56%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
Frame = -3
Query: 315 TRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
TRQ+AC+HC QTGHSSNDCPS++ SR SQ R ++ + +++ CN CG PCI RTANT
Sbjct: 758 TRQTACIHCSQTGHSSNDCPSRVPRSRNSQ-SHRTNMPSGESSIPCNVCGTPCILRTANT 816
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGG---------GGACSPPSRGSRG 1
NNRGRKFY CQ +ECNFFVWEDS+ N+ +GG A +P RG RG
Sbjct: 817 ENNRGRKFYSCQSQECNFFVWEDSL-NSSSGGRSAQPATARSSASNPSRRGGRG 869
>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 137 bits (345), Expect = 3e-30
Identities = 64/114 (56%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
Frame = -3
Query: 315 TRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
TRQ+AC+HC QTGHSSNDCPS++ SR SQ R ++ + +++ CN CG PCI RTANT
Sbjct: 428 TRQTACIHCSQTGHSSNDCPSRVPRSRNSQ-SHRTNMPSGESSIPCNVCGTPCILRTANT 486
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGG---------GGACSPPSRGSRG 1
NNRGRKFY CQ +ECNFFVWEDS+ N+ +GG A +P RG RG
Sbjct: 487 ENNRGRKFYSCQSQECNFFVWEDSL-NSSSGGRSAQPATARSSASNPSRRGGRG 539
>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
1 [Theobroma cacao]
Length = 914
Score = 132 bits (333), Expect = 8e-29
Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 8/111 (7%)
Frame = -3
Query: 318 TTRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTAN 139
++RQ AC++C+QTGHSSNDCPSQ S SR S+ R S QN ++SC+ CG PC+ RTAN
Sbjct: 756 SSRQGACLYCQQTGHSSNDCPSQFSGSRNSRS--RTSSQNGEPSVSCSTCGTPCVLRTAN 813
Query: 138 TANNRGRKFYKCQREECNFFVWEDSIDNNDTGG--------GGACSPPSRG 10
TANNRGRKFY C +ECNFF+WED NN TGG G+ S SRG
Sbjct: 814 TANNRGRKFYSCPSQECNFFIWEDE-HNNGTGGRSIPRAGINGSASNSSRG 863
>gb|KHG06666.1| DNA topoisomerase 3-alpha [Gossypium arboreum]
Length = 264
Score = 131 bits (330), Expect = 2e-28
Identities = 59/104 (56%), Positives = 72/104 (69%)
Frame = -3
Query: 318 TTRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTAN 139
+ R +AC+HC+QTGHSSNDCPSQ S SR SQ + QN ++SC+ CG PC+ RTAN
Sbjct: 83 SNRHNACIHCQQTGHSSNDCPSQFSRSRNSQS--HTNSQNGEPSVSCSTCGMPCVLRTAN 140
Query: 138 TANNRGRKFYKCQREECNFFVWEDSIDNNDTGGGGACSPPSRGS 7
TANNRGRKFY C +ECNFF+WED + N G GG P + S
Sbjct: 141 TANNRGRKFYSCPSQECNFFIWEDGVSN---GNGGRSIPSTNRS 181
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer arietinum]
Length = 920
Score = 131 bits (329), Expect = 2e-28
Identities = 57/93 (61%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -3
Query: 312 RQSACVHCRQTGHSSNDCPSQISNSRGS-QHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
RQ+ C++C++TGHSSNDCPSQ SR + QHG ++ Q+ ++SCN+CG PC+ RTANT
Sbjct: 759 RQAVCMNCQETGHSSNDCPSQTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANT 818
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGGG 37
ANNRGRKFY C +ECNFFVWED + N+ TGGG
Sbjct: 819 ANNRGRKFYSCPSQECNFFVWEDDL-NSGTGGG 850
>ref|XP_012489370.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Gossypium raimondii]
Length = 917
Score = 130 bits (328), Expect = 3e-28
Identities = 60/112 (53%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Frame = -3
Query: 318 TTRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTAN 139
+ R ++C+HC+QTGHSSNDCPSQ S SR SQ + +N ++SC+ CG PC+ RTAN
Sbjct: 764 SNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQS--HTNSENGDPSVSCSTCGMPCVLRTAN 821
Query: 138 TANNRGRKFYKCQREECNFFVWEDSIDNNDTGGGGA------CSPPSRGSRG 1
TANNRGRKFY C +ECNFF+WED + N G GG CS + G RG
Sbjct: 822 TANNRGRKFYSCPSQECNFFIWEDGVSN---GNGGRSIPSTNCSASNSGRRG 870
>ref|XP_012489368.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Gossypium raimondii]
Length = 936
Score = 130 bits (328), Expect = 3e-28
Identities = 60/112 (53%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Frame = -3
Query: 318 TTRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTAN 139
+ R ++C+HC+QTGHSSNDCPSQ S SR SQ + +N ++SC+ CG PC+ RTAN
Sbjct: 783 SNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQS--HTNSENGDPSVSCSTCGMPCVLRTAN 840
Query: 138 TANNRGRKFYKCQREECNFFVWEDSIDNNDTGGGGA------CSPPSRGSRG 1
TANNRGRKFY C +ECNFF+WED + N G GG CS + G RG
Sbjct: 841 TANNRGRKFYSCPSQECNFFIWEDGVSN---GNGGRSIPSTNCSASNSGRRG 889
>ref|XP_012489371.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Gossypium raimondii]
gi|763773368|gb|KJB40491.1| hypothetical protein
B456_007G066700 [Gossypium raimondii]
gi|763773370|gb|KJB40493.1| hypothetical protein
B456_007G066700 [Gossypium raimondii]
Length = 909
Score = 130 bits (328), Expect = 3e-28
Identities = 60/112 (53%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Frame = -3
Query: 318 TTRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTAN 139
+ R ++C+HC+QTGHSSNDCPSQ S SR SQ + +N ++SC+ CG PC+ RTAN
Sbjct: 756 SNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQS--HTNSENGDPSVSCSTCGMPCVLRTAN 813
Query: 138 TANNRGRKFYKCQREECNFFVWEDSIDNNDTGGGGA------CSPPSRGSRG 1
TANNRGRKFY C +ECNFF+WED + N G GG CS + G RG
Sbjct: 814 TANNRGRKFYSCPSQECNFFIWEDGVSN---GNGGRSIPSTNCSASNSGRRG 862
>ref|XP_012489369.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Gossypium raimondii]
gi|763773367|gb|KJB40490.1| hypothetical protein
B456_007G066700 [Gossypium raimondii]
gi|763773369|gb|KJB40492.1| hypothetical protein
B456_007G066700 [Gossypium raimondii]
Length = 928
Score = 130 bits (328), Expect = 3e-28
Identities = 60/112 (53%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Frame = -3
Query: 318 TTRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTAN 139
+ R ++C+HC+QTGHSSNDCPSQ S SR SQ + +N ++SC+ CG PC+ RTAN
Sbjct: 775 SNRHNSCIHCQQTGHSSNDCPSQFSRSRNSQS--HTNSENGDPSVSCSTCGMPCVLRTAN 832
Query: 138 TANNRGRKFYKCQREECNFFVWEDSIDNNDTGGGGA------CSPPSRGSRG 1
TANNRGRKFY C +ECNFF+WED + N G GG CS + G RG
Sbjct: 833 TANNRGRKFYSCPSQECNFFIWEDGVSN---GNGGRSIPSTNCSASNSGRRG 881
>ref|XP_009622051.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Nicotiana
tomentosiformis]
Length = 853
Score = 128 bits (322), Expect = 1e-27
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = -3
Query: 309 QSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTAN 130
Q +C +CRQTGH SNDCPSQ S SR ++ + + LQN + CN+CGEPC RTANTAN
Sbjct: 712 QGSCAYCRQTGHLSNDCPSQASRSRTAR-SQEVDLQNGEPLIPCNSCGEPCNLRTANTAN 770
Query: 129 NRGRKFYKCQREECNFFVWEDSIDNNDTGGGGACSPPSRGSRG 1
NRGRKF+ CQ ECNFFVWED+++ + A + RG RG
Sbjct: 771 NRGRKFFSCQSRECNFFVWEDTLNGGERTNTSASTSSRRGGRG 813
>ref|XP_009622050.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Nicotiana
tomentosiformis]
Length = 900
Score = 128 bits (322), Expect = 1e-27
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = -3
Query: 309 QSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTAN 130
Q +C +CRQTGH SNDCPSQ S SR ++ + + LQN + CN+CGEPC RTANTAN
Sbjct: 759 QGSCAYCRQTGHLSNDCPSQASRSRTAR-SQEVDLQNGEPLIPCNSCGEPCNLRTANTAN 817
Query: 129 NRGRKFYKCQREECNFFVWEDSIDNNDTGGGGACSPPSRGSRG 1
NRGRKF+ CQ ECNFFVWED+++ + A + RG RG
Sbjct: 818 NRGRKFFSCQSRECNFFVWEDTLNGGERTNTSASTSSRRGGRG 860
>ref|XP_009622049.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Nicotiana
tomentosiformis]
Length = 913
Score = 128 bits (322), Expect = 1e-27
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = -3
Query: 309 QSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTAN 130
Q +C +CRQTGH SNDCPSQ S SR ++ + + LQN + CN+CGEPC RTANTAN
Sbjct: 772 QGSCAYCRQTGHLSNDCPSQASRSRTAR-SQEVDLQNGEPLIPCNSCGEPCNLRTANTAN 830
Query: 129 NRGRKFYKCQREECNFFVWEDSIDNNDTGGGGACSPPSRGSRG 1
NRGRKF+ CQ ECNFFVWED+++ + A + RG RG
Sbjct: 831 NRGRKFFSCQSRECNFFVWEDTLNGGERTNTSASTSSRRGGRG 873
>ref|XP_011652135.1| PREDICTED: DNA topoisomerase 3-alpha [Cucumis sativus]
gi|700204227|gb|KGN59360.1| hypothetical protein
Csa_3G813290 [Cucumis sativus]
Length = 924
Score = 126 bits (317), Expect = 5e-27
Identities = 56/89 (62%), Positives = 70/89 (78%)
Frame = -3
Query: 309 QSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTAN 130
QS C+ C+Q GHSSNDCPSQ SR +Q RR Q+ +++SC++CG PC+ RTANTAN
Sbjct: 759 QSVCIFCQQVGHSSNDCPSQSVGSRSAQ--RR---QSGESSVSCSSCGSPCVLRTANTAN 813
Query: 129 NRGRKFYKCQREECNFFVWEDSIDNNDTG 43
NRGRKFYKCQ +ECNFFVWED++DN + G
Sbjct: 814 NRGRKFYKCQSQECNFFVWEDNVDNGNGG 842
>ref|XP_008394176.1| PREDICTED: DNA-binding protein HEXBP-like [Malus domestica]
Length = 166
Score = 124 bits (310), Expect = 4e-26
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = -3
Query: 315 TRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
TRQ AC++C QTGHSS DCPSQ S + S R +++Q+ ++SC+ CG PC RTANT
Sbjct: 10 TRQGACIYCHQTGHSSGDCPSQSSGPQ-SARPRPMNVQSGQVSISCSTCGAPCALRTANT 68
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGGGG 34
NRGRKFY CQ + CNFFVWEDS+ NND GG G
Sbjct: 69 TANRGRKFYSCQSQACNFFVWEDSL-NNDNGGRG 101
>ref|XP_007214290.1| hypothetical protein PRUPE_ppb010436mg [Prunus persica]
gi|462410155|gb|EMJ15489.1| hypothetical protein
PRUPE_ppb010436mg [Prunus persica]
Length = 166
Score = 124 bits (310), Expect = 4e-26
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 7/108 (6%)
Frame = -3
Query: 315 TRQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANT 136
TRQ AC++C QTGHSS +CPSQ S R S+ + +++Q+ ++SC+ACG PC RTANT
Sbjct: 10 TRQGACIYCHQTGHSSGNCPSQSSGPRSSRP-QSMNVQSGQVSISCSACGAPCTSRTANT 68
Query: 135 ANNRGRKFYKCQREECNFFVWEDSIDNNDTGGG-------GACSPPSR 13
NRGRKFY CQ + CNFFVWEDSI+N + G G + S PSR
Sbjct: 69 TTNRGRKFYSCQSQACNFFVWEDSINNGNRGRGFQRVNVSASASNPSR 116
>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
Length = 940
Score = 123 bits (309), Expect = 5e-26
Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Frame = -3
Query: 312 RQSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTA 133
RQ AC++C+Q GHSS+DCPSQ S SR ++ ++ Q+ +++ C CG PC+ RTANTA
Sbjct: 787 RQRACIYCQQMGHSSSDCPSQFSGSRNAR-ANGMNPQSGESSIQCTTCGTPCVLRTANTA 845
Query: 132 NNRGRKFYKCQREECNFFVWEDSIDNNDTG------GGGACSPPSRGSRG 1
NNRGRKFY C +ECNFFVWED N G A +P RG RG
Sbjct: 846 NNRGRKFYSCSSQECNFFVWEDDAKNGTRRMPQAGVSGSASNPSQRGGRG 895
>ref|XP_008443145.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Cucumis melo]
Length = 922
Score = 123 bits (308), Expect = 6e-26
Identities = 55/89 (61%), Positives = 68/89 (76%)
Frame = -3
Query: 309 QSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTAN 130
QS C+ C+Q GHSSNDCPSQ S GS GR Q+ +++SC++CG PC+ RTANT N
Sbjct: 759 QSVCIFCQQVGHSSNDCPSQSVGS-GSARGR----QSGESSVSCSSCGTPCVLRTANTTN 813
Query: 129 NRGRKFYKCQREECNFFVWEDSIDNNDTG 43
NRGRKFYKCQ +ECNFFVWED++DN + G
Sbjct: 814 NRGRKFYKCQSQECNFFVWEDNVDNVNGG 842
>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
Length = 915
Score = 123 bits (308), Expect = 6e-26
Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Frame = -3
Query: 309 QSACVHCRQTGHSSNDCPSQISNSRGSQHGRRLSLQNRTTTLSCNACGEPCIFRTANTAN 130
QS+C +CRQTGH SNDCPSQ S R + R + N +++ CN+CG PCI RTANTAN
Sbjct: 770 QSSCAYCRQTGHLSNDCPSQASRGRTA---RAQEVDNGESSIPCNSCGAPCILRTANTAN 826
Query: 129 NRGRKFYKCQREECNFFVWEDSIDNN--DTGGGGACSPPSRGSRG 1
NRGRKF+ CQ +ECNFFVWED+++ + A + RG RG
Sbjct: 827 NRGRKFFSCQSQECNFFVWEDNLNGGRAERANTSASTSSGRGGRG 871