BLASTX nr result
ID: Cinnamomum24_contig00034759
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00034759
(244 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIO05698.1| putative DNA-directed RNA polymerase IV subunit 1... 103 4e-20
ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV su... 103 5e-20
ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV su... 103 5e-20
ref|XP_011628416.1| PREDICTED: DNA-directed RNA polymerase IV su... 102 9e-20
ref|XP_008803255.1| PREDICTED: DNA-directed RNA polymerase IV su... 102 9e-20
gb|ERN19396.1| hypothetical protein AMTR_s00069p00150990 [Ambore... 102 9e-20
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su... 99 9e-19
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su... 99 9e-19
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r... 99 9e-19
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su... 99 9e-19
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 95 2e-17
ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV su... 94 4e-17
ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV su... 94 5e-17
gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium r... 94 5e-17
ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV su... 94 5e-17
ref|XP_010919205.1| PREDICTED: DNA-directed RNA polymerase IV su... 93 7e-17
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 93 9e-17
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 93 9e-17
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 93 9e-17
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 93 9e-17
>gb|AIO05698.1| putative DNA-directed RNA polymerase IV subunit 1, partial [Cocos
nucifera]
Length = 568
Score = 103 bits (258), Expect = 4e-20
Identities = 49/81 (60%), Positives = 63/81 (77%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAA+L+T+S VFLN+F+MQQLEM CP EL P+I+KAP +SPLWTG+QLFSMLLP +
Sbjct: 49 LTAAHLLTSSIVFLNKFEMQQLEMLCPSELPFPSIIKAPTTRSPLWTGQQLFSMLLPPTM 108
Query: 63 DFFSASDTVLIRKGNILYSSG 1
DF + + I KG +L +SG
Sbjct: 109 DFSMGPNKIQISKGEVLSTSG 129
>ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nelumbo nucifera]
Length = 1373
Score = 103 bits (257), Expect = 5e-20
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AA+L+T + VFL+ FQMQQL+M CP +LQ P ILKAPLL++PLWTGKQLF MLLP+SF
Sbjct: 389 LSAAHLVTQNGVFLDMFQMQQLKMLCPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSF 448
Query: 63 DFFSASDTVLIRKGNILYSSG 1
D+ S V I G +L S G
Sbjct: 449 DYVFPSSGVKISNGELLCSFG 469
>ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nelumbo nucifera]
Length = 1489
Score = 103 bits (257), Expect = 5e-20
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AA+L+T + VFL+ FQMQQL+M CP +LQ P ILKAPLL++PLWTGKQLF MLLP+SF
Sbjct: 511 LSAAHLVTQNGVFLDMFQMQQLKMLCPHQLQIPVILKAPLLEAPLWTGKQLFDMLLPQSF 570
Query: 63 DFFSASDTVLIRKGNILYSSG 1
D+ S V I G +L S G
Sbjct: 571 DYVFPSSGVKISNGELLCSFG 591
>ref|XP_011628416.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Amborella
trichopoda]
Length = 1789
Score = 102 bits (255), Expect = 9e-20
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+T +D FL++FQMQQL+MFCP EL PAI K+PL + PLWTG Q FSM LP+S
Sbjct: 882 LTAAYLVTRNDEFLDQFQMQQLQMFCPSELPIPAICKSPLSRGPLWTGHQFFSMFLPKSL 941
Query: 63 DFFSASDTVLIRKGNILYSSG 1
D+ S+ VLI +G +L +SG
Sbjct: 942 DYQYVSNGVLISEGELLTTSG 962
>ref|XP_008803255.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Phoenix
dactylifera]
Length = 1567
Score = 102 bits (255), Expect = 9e-20
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAA+L+TNS VFLN+F+MQQ EM CP + P+I+KAP +SPLWTG+QLFSMLLP +
Sbjct: 570 LTAAHLLTNSIVFLNKFEMQQFEMLCPSQSPSPSIIKAPTTRSPLWTGQQLFSMLLPPTM 629
Query: 63 DFFSASDTVLIRKGNILYSSG 1
DF S+ + I KG +L +SG
Sbjct: 630 DFSMGSNKIPISKGEVLSTSG 650
>gb|ERN19396.1| hypothetical protein AMTR_s00069p00150990 [Amborella trichopoda]
Length = 966
Score = 102 bits (255), Expect = 9e-20
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+T +D FL++FQMQQL+MFCP EL PAI K+PL + PLWTG Q FSM LP+S
Sbjct: 581 LTAAYLVTRNDEFLDQFQMQQLQMFCPSELPIPAICKSPLSRGPLWTGHQFFSMFLPKSL 640
Query: 63 DFFSASDTVLIRKGNILYSSG 1
D+ S+ VLI +G +L +SG
Sbjct: 641 DYQYVSNGVLISEGELLTTSG 661
>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Gossypium raimondii]
Length = 1300
Score = 99.4 bits (246), Expect = 9e-19
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+ V LN FQMQQLEMFCP PAI+KAPLL +P+WTGKQLFSML P F
Sbjct: 510 LTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEF 569
Query: 63 DFFSASDTVLIRKGNILYSS 4
D+ A V+I G+++ SS
Sbjct: 570 DYVFAPSGVVIHNGDLICSS 589
>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Gossypium raimondii]
Length = 1340
Score = 99.4 bits (246), Expect = 9e-19
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+ V LN FQMQQLEMFCP PAI+KAPLL +P+WTGKQLFSML P F
Sbjct: 369 LTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEF 428
Query: 63 DFFSASDTVLIRKGNILYSS 4
D+ A V+I G+++ SS
Sbjct: 429 DYVFAPSGVVIHNGDLICSS 448
>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
Length = 1478
Score = 99.4 bits (246), Expect = 9e-19
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+ V LN FQMQQLEMFCP PAI+KAPLL +P+WTGKQLFSML P F
Sbjct: 507 LTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEF 566
Query: 63 DFFSASDTVLIRKGNILYSS 4
D+ A V+I G+++ SS
Sbjct: 567 DYVFAPSGVVIHNGDLICSS 586
>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X1 [Gossypium raimondii]
gi|763758424|gb|KJB25755.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
gi|763758426|gb|KJB25757.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
Length = 1481
Score = 99.4 bits (246), Expect = 9e-19
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+ V LN FQMQQLEMFCP PAI+KAPLL +P+WTGKQLFSML P F
Sbjct: 510 LTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPLPAIVKAPLLSNPVWTGKQLFSMLFPPEF 569
Query: 63 DFFSASDTVLIRKGNILYSS 4
D+ A V+I G+++ SS
Sbjct: 570 DYVFAPSGVVIHNGDLICSS 589
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 94.7 bits (234), Expect = 2e-17
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAAYL+ V LN FQMQQLEMFCP PAI+KAPLL+S +WTGKQL SML P F
Sbjct: 510 LTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEF 569
Query: 63 DFFSASDTVLIRKGNILYSS 4
D+ + V+IR G ++ SS
Sbjct: 570 DYDFTPNDVVIRNGELISSS 589
>ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Malus
domestica]
Length = 1287
Score = 94.0 bits (232), Expect = 4e-17
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAA+L+ V LNR QMQQL+ FC EL PAI+KAP L P WTGKQ+FSMLLP F
Sbjct: 479 LTAAHLILEDGVLLNRSQMQQLQRFCCNELPSPAIIKAPSLNGPAWTGKQVFSMLLPLGF 538
Query: 63 DFFSASDTVLIRKGNILYSSG 1
D+ A D V +R G +L S G
Sbjct: 539 DYDFAPDGVCVRNGELLSSEG 559
>ref|XP_012488706.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Gossypium
raimondii]
Length = 1485
Score = 93.6 bits (231), Expect = 5e-17
Identities = 48/81 (59%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AAYL+ V LN ++MQQLEMFCP PAI+KAPLL +P+WTGKQLFSML P
Sbjct: 516 LSAAYLVNGDGVLLNLYEMQQLEMFCPNRSPSPAIIKAPLLSNPVWTGKQLFSMLFPPEL 575
Query: 63 DF-FSASDTVLIRKGNILYSS 4
D+ FS SD V IR G ++ SS
Sbjct: 576 DYGFSPSDLV-IRNGELITSS 595
>gb|KJB39621.1| hypothetical protein B456_007G022200 [Gossypium raimondii]
Length = 1397
Score = 93.6 bits (231), Expect = 5e-17
Identities = 48/81 (59%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AAYL+ V LN ++MQQLEMFCP PAI+KAPLL +P+WTGKQLFSML P
Sbjct: 428 LSAAYLVNGDGVLLNLYEMQQLEMFCPNRSPSPAIIKAPLLSNPVWTGKQLFSMLFPPEL 487
Query: 63 DF-FSASDTVLIRKGNILYSS 4
D+ FS SD V IR G ++ SS
Sbjct: 488 DYGFSPSDLV-IRNGELITSS 507
>ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Pyrus x
bretschneideri] gi|694406181|ref|XP_009377913.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
[Pyrus x bretschneideri]
Length = 1466
Score = 93.6 bits (231), Expect = 5e-17
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAA+L+ V LNR QMQQL+ FC EL PAI+KAP L P WTGKQ+FSMLLP F
Sbjct: 500 LTAAHLILEDGVLLNRSQMQQLQRFCCNELPSPAIIKAPSLDGPAWTGKQVFSMLLPLGF 559
Query: 63 DFFSASDTVLIRKGNILYSSG 1
D+ A D V +R G +L S G
Sbjct: 560 DYDFAPDGVCVRNGELLSSEG 580
>ref|XP_010919205.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Elaeis
guineensis]
Length = 1569
Score = 93.2 bits (230), Expect = 7e-17
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
LTAA+L+T++ VFLN+F+MQQLEM C L P+I+KAP + PLWTG+QLFSM+LP +
Sbjct: 570 LTAAHLLTSNIVFLNKFEMQQLEMLCFSRLPFPSIIKAPTTRFPLWTGQQLFSMVLPPAM 629
Query: 63 DFFSASDTVLIRKGNILYSSG 1
DF + + I KG +L +SG
Sbjct: 630 DFSMGPNKIQISKGEVLSTSG 650
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
[Vitis vinifera]
Length = 1354
Score = 92.8 bits (229), Expect = 9e-17
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AA+L+ V LN FQMQQLEMFCP +LQ PAI+KAPLL + +WTGKQLFSMLLP F
Sbjct: 390 LSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGF 449
Query: 63 DFFSASDTVLIRKGNILYSS 4
++ + V I G ++ SS
Sbjct: 450 NYVFPLNGVRISDGELISSS 469
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Vitis vinifera]
Length = 1458
Score = 92.8 bits (229), Expect = 9e-17
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AA+L+ V LN FQMQQLEMFCP +LQ PAI+KAPLL + +WTGKQLFSMLLP F
Sbjct: 496 LSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGF 555
Query: 63 DFFSASDTVLIRKGNILYSS 4
++ + V I G ++ SS
Sbjct: 556 NYVFPLNGVRISDGELISSS 575
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Vitis vinifera]
Length = 1460
Score = 92.8 bits (229), Expect = 9e-17
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AA+L+ V LN FQMQQLEMFCP +LQ PAI+KAPLL + +WTGKQLFSMLLP F
Sbjct: 496 LSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGF 555
Query: 63 DFFSASDTVLIRKGNILYSS 4
++ + V I G ++ SS
Sbjct: 556 NYVFPLNGVRISDGELISSS 575
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 92.8 bits (229), Expect = 9e-17
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = -2
Query: 243 LTAAYLMTNSDVFLNRFQMQQLEMFCPRELQCPAILKAPLLKSPLWTGKQLFSMLLPESF 64
L+AA+L+ V LN FQMQQLEMFCP +LQ PAI+KAPLL + +WTGKQLFSMLLP F
Sbjct: 499 LSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGF 558
Query: 63 DFFSASDTVLIRKGNILYSS 4
++ + V I G ++ SS
Sbjct: 559 NYVFPLNGVRISDGELISSS 578