BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00034506
         (324 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015876.1| Pentatricopeptide repeat superfamily protein...    78   3e-12
ref|XP_012476600.1| PREDICTED: putative pentatricopeptide repeat...    72   1e-10
ref|XP_002269762.2| PREDICTED: putative pentatricopeptide repeat...    70   5e-10
emb|CBI28363.3| unnamed protein product [Vitis vinifera]               70   5e-10
ref|XP_010907154.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_010244176.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_006647336.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-07
ref|XP_004952633.1| PREDICTED: pentatricopeptide repeat-containi...    55   9e-07
gb|EMT02731.1| Pentatricopeptide repeat-containing protein [Aegi...    59   1e-06
ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [S...    58   3e-06
ref|XP_010679297.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
gb|KQK12076.1| hypothetical protein BRADI_1g01470 [Brachypodium ...    56   9e-06
ref|XP_010664278.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06
ref|XP_003559133.2| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06
gb|EMT04224.1| hypothetical protein F775_10866 [Aegilops tauschii]     56   9e-06
ref|XP_008645746.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>ref|XP_007015876.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508786239|gb|EOY33495.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 974

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 52/111 (46%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
 Frame = +2

Query: 32  MLSCAYASSIPPTSPLF--HKPPCIAPYK--------NITTLKPIL----HAPTKPTXXX 169
           +L+C+  S IP   P F  H+ P  A +         N+  LKP      HA  KPT   
Sbjct: 4   LLTCS--SVIPSFPPFFLKHQTPKTAHFSQCNLIINHNLKQLKPTHFLKPHAYPKPTLFY 61

Query: 170 XXXXXXXQLYSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
                  +LY  AG M+EAR LFD MPERTLISWTILMSGYA++GPT E M
Sbjct: 62  FNLYL--RLYINAGFMQEARDLFDSMPERTLISWTILMSGYAKHGPTKEAM 110


>ref|XP_012476600.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Gossypium raimondii]
           gi|763741543|gb|KJB09042.1| hypothetical protein
           B456_001G121000 [Gossypium raimondii]
          Length = 976

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +2

Query: 14  SSVLPPMLSCAYASSIPPTSPLFHKPPCIAPYKNITT-LKPILHAPTKPTXXXXXXXXXX 190
           SS  P +L  ++   +     L H  P  + +  +T  LKP  HA  KP           
Sbjct: 12  SSSPPFLLLQSHTPKLTHFPQLNHITPQNSQHLKLTHFLKP--HANPKPPLFYFNLHL-- 67

Query: 191 QLYSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
           QLY  AG M+EAR LFD MPERTLISWTILMSGYA++GP++E +
Sbjct: 68  QLYINAGFMQEARDLFDSMPERTLISWTILMSGYAKHGPSTEAL 111


>ref|XP_002269762.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630 [Vitis vinifera]
          Length = 965

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
 Frame = +2

Query: 59  IPPTSPLFHKPPCIAPYKNI---TTLKPI----LHAPTKPTXXXXXXXXXXQLYSRAGRM 217
           +PP+    H    +    N    T LKPI    +HA T+            ++Y  AG M
Sbjct: 14  LPPSLHNLHSQTLLQLQSNHIAQTKLKPIPQNEIHARTR------LFNLYLRMYVNAGAM 67

Query: 218 REARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
           +EAR LFD+MPER+L+SWTI+MSGYAR+GP SE +
Sbjct: 68  QEARKLFDEMPERSLVSWTIVMSGYARHGPASEVL 102


>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
 Frame = +2

Query: 59  IPPTSPLFHKPPCIAPYKNI---TTLKPI----LHAPTKPTXXXXXXXXXXQLYSRAGRM 217
           +PP+    H    +    N    T LKPI    +HA T+            ++Y  AG M
Sbjct: 14  LPPSLHNLHSQTLLQLQSNHIAQTKLKPIPQNEIHARTR------LFNLYLRMYVNAGAM 67

Query: 218 REARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
           +EAR LFD+MPER+L+SWTI+MSGYAR+GP SE +
Sbjct: 68  QEARKLFDEMPERSLVSWTIVMSGYARHGPASEVL 102


>ref|XP_010907154.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Elaeis guineensis]
          Length = 985

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 44/123 (35%), Positives = 58/123 (47%), Gaps = 23/123 (18%)
 Frame = +2

Query: 23  LPPMLSCAYASSIPPTS---PLFHKPP-------------CIAPYKNITTLKPILHAPTK 154
           +P  L C  +S +PPT    PL+ K               C     +IT+    +  PT 
Sbjct: 1   MPTFLLCTSSSPVPPTPSHHPLYKKSTSRNPQETISLKAVCSPGVHSITSANDTIIGPTS 60

Query: 155 PTXXXXXXXXXXQL-------YSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTS 313
                       +L       Y+RAGRMREAR LF+ MP++TL+SWTILMSGY  +G   
Sbjct: 61  CINDRRNVLNQDKLTLSLLHEYTRAGRMREARALFNAMPDKTLVSWTILMSGYTLHGHAI 120

Query: 314 ETM 322
           E M
Sbjct: 121 EAM 123


>ref|XP_010244176.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Nelumbo nucifera]
          Length = 971

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 48/108 (44%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
 Frame = +2

Query: 32  MLSCAYASSIP-PTSPLFHK---PPCIAPYKNITT--LKPIL--HAPT---KPTXXXXXX 178
           ML+CA  S  P P SP  H    P  +    NITT  +K +   HA       T      
Sbjct: 4   MLTCAIPSFPPSPFSPSIHHIHHPRHLLQSNNITTHDIKKLKANHARQFHRHSTRTLFFF 63

Query: 179 XXXXQLYSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
               QLY  A  M +AR LFD+MP RTL+SWTILMSGY R+GP +ET+
Sbjct: 64  NLYLQLYVSAALMSKARALFDEMPVRTLVSWTILMSGYTRHGPATETL 111


>ref|XP_006647336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Oryza brachyantha]
          Length = 791

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +2

Query: 62  PPTSPLFHKPPCIAPYKNITTLKPILHAPTKPTXXXXXXXXXXQLYSRAGRMREARHLFD 241
           PP S   H     A    ++    +LH  ++P           + ++RAGRM+ AR  FD
Sbjct: 8   PPPSSFPHSSRLCA---GVSHSHAVLHRSSEPVPDAAAQLSLMRAHARAGRMQPARRAFD 64

Query: 242 KMP--ERTLISWTILMSGYARYGPTSETM 322
            MP  +R+L++WT+LMSGYA +GP SE +
Sbjct: 65  AMPPRDRSLVAWTVLMSGYATHGPASEAL 93


>ref|XP_004952633.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Setaria italica]
           gi|944265633|gb|KQL29873.1| hypothetical protein
           SETIT_019566mg [Setaria italica]
          Length = 798

 Score = 55.5 bits (132), Expect(2) = 9e-07
 Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPE--RTLISWTILMSGYARYGPTSETM 322
           ++RAGRMR AR +FD MP   R+L++WT LMSGYA +GP +E +
Sbjct: 55  HARAGRMRPAREVFDAMPAPGRSLVAWTALMSGYATHGPATEAL 98



 Score = 23.9 bits (50), Expect(2) = 9e-07
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +1

Query: 22  PATHAIMRLCVLYSSNL-PSLPQAPLHRSLQEHHNTQTNPPCTYQ 153
           P  H + R   + SS + P+ P   +HRS     N  T P    Q
Sbjct: 4   PPPHLLPRSSTIISSAVNPASPHNGIHRSSSSIPNAATTPAAAAQ 48


>gb|EMT02731.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 814

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
 Frame = +2

Query: 56  SIPPTSPLFHKPPCIA-------PYKNITTLKPILHAPTKPTXXXXXXXXXXQLYSRAGR 214
           ++PP  PL  +  CI        PYK++  +     AP+             + ++RAGR
Sbjct: 2   ALPP--PLLPRSSCICRGVTRATPYKSVENIPDASTAPSATAQHSLL-----RAHTRAGR 54

Query: 215 MREARHLFDKMP--ERTLISWTILMSGYARYGPTSETM 322
           M+ AR +F+ MP  +R+L++WT +MSGYA +GP SE +
Sbjct: 55  MQPARQVFEAMPPRDRSLVAWTAIMSGYATHGPASEAL 92


>ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
           gi|241933759|gb|EES06904.1| hypothetical protein
           SORBIDRAFT_04g021580 [Sorghum bicolor]
          Length = 798

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
 Frame = +2

Query: 23  LPPMLSCAYASSIPPTSPL--FHKPPCIAPYKNITTLKPILHAPTKPTXXXXXXXXXXQL 196
           L P  S   +S I P SP    H+P    P  + TT                      + 
Sbjct: 11  LLPRSSSFTSSVITPASPHRGSHRPNTSVPNASTTTATAA-------------QLSLLRA 57

Query: 197 YSRAGRMREARHLFDKMPER--TLISWTILMSGYARYGPTSETM 322
           + RAGRMR AR +FD MP+R  +L++WT LMSGYA +GP SE +
Sbjct: 58  HVRAGRMRPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEAL 101


>ref|XP_010679297.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Beta vulgaris subsp. vulgaris]
           gi|870868880|gb|KMT19676.1| hypothetical protein
           BVRB_1g010620 [Beta vulgaris subsp. vulgaris]
          Length = 699

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 22/42 (52%), Positives = 33/42 (78%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
           Y+ AGR++EA+ LFDKMPER++ISW  +++GY R+G   E +
Sbjct: 338 YAMAGRLKEAQELFDKMPERSIISWNAMLAGYVRFGQLEEAL 379


>gb|KQK12076.1| hypothetical protein BRADI_1g01470 [Brachypodium distachyon]
          Length = 640

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSE 316
           Y RAGR+ EAR LFD MPER+++SWT +M GYAR G   E
Sbjct: 141 YCRAGRVSEARELFDAMPERSVVSWTAMMHGYARAGMPRE 180


>ref|XP_010664278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Vitis vinifera]
          Length = 614

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
           YSR G++ EAR +FDKMPER ++SWT +++GY+RYG   E +
Sbjct: 127 YSRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRYGFDDEAL 168


>ref|XP_003559133.2| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 567

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSE 316
           Y RAGR+ EAR LFD MPER+++SWT +M GYAR G   E
Sbjct: 68  YCRAGRVSEARELFDAMPERSVVSWTAMMHGYARAGMPRE 107


>gb|EMT04224.1| hypothetical protein F775_10866 [Aegilops tauschii]
          Length = 582

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPERTLISWTILMSGYARYGPTSETM 322
           Y+R GRM EAR LFD+MPER +ISW+I++ GY R G  SE +
Sbjct: 247 YARQGRMDEARVLFDEMPERNVISWSIVVDGYVRCGEPSEAL 288


>ref|XP_008645746.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Zea mays] gi|413937111|gb|AFW71662.1|
           hypothetical protein ZEAMMB73_019211 [Zea mays]
          Length = 798

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 2/44 (4%)
 Frame = +2

Query: 197 YSRAGRMREARHLFDKMPER--TLISWTILMSGYARYGPTSETM 322
           ++RAGRM+ AR +FD MP+R  +L++WT LMSGYA +GP SE +
Sbjct: 57  HARAGRMQPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEAL 100


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
 Frame = +2

Query: 56  SIPPTSPLFHKPPCIAP-YKNITTLKPILHAPTKPTXXXXXXXXXXQLYSRAGRMREARH 232
           ++PP  PL  +  CI     + T  K     P   +          + ++RAGRM  AR 
Sbjct: 2   ALPP--PLLPRSSCICRGVTHATRHKSTTTVPDASSSSATAQYSLLRAHTRAGRMEPARQ 59

Query: 233 LFDKMPE--RTLISWTILMSGYARYGPTSETM 322
           +FD MP   R+L++WT +MSGYA +GP SE +
Sbjct: 60  VFDAMPPPARSLVAWTAIMSGYATHGPASEAL 91