BLASTX nr result
ID: Cinnamomum24_contig00034472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00034472
(241 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 109 9e-22
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 108 2e-21
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 108 2e-21
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 108 2e-21
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 108 2e-21
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 107 3e-21
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 107 4e-21
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 106 8e-21
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 105 1e-20
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 105 1e-20
emb|CBG76267.1| OO_Ba0005L10-OO_Ba0081K17.18 [Oryza officinalis] 105 1e-20
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 105 2e-20
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 105 2e-20
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 103 4e-20
gb|ABG22123.1| polyprotein [Prunus avium] 103 4e-20
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 103 5e-20
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 103 7e-20
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 102 1e-19
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 102 1e-19
gb|ABG22121.1| polyprotein [Solanum melongena] 102 1e-19
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 109 bits (272), Expect = 9e-22
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AK+ILGMEI RDRKAGKL+LSQ+ Y E+VLE F M+++KPVNTPLAAHFKLS P TE
Sbjct: 401 AKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTE 460
Query: 59 EEVEHMSCVPYASAVGNIM 3
+E E MS +PY+S VG++M
Sbjct: 461 KEKESMSHIPYSSVVGSLM 479
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 108 bits (269), Expect = 2e-21
Identities = 51/79 (64%), Positives = 66/79 (83%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKIL MEI R+R +GKL+LSQKGY EKVL F M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 703 AKKILSMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 762
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY+SAVG++M
Sbjct: 763 YDIEYMSRVPYSSAVGSLM 781
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 108 bits (269), Expect = 2e-21
Identities = 51/79 (64%), Positives = 66/79 (83%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI R+R +GKL+LSQKGY EKVL F M +KPV+TPLAAHF+ S+ L PQ++
Sbjct: 788 AKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRSSSDLCPQSD 847
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY+SAVG++M
Sbjct: 848 YDIEYMSRVPYSSAVGSLM 866
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 108 bits (269), Expect = 2e-21
Identities = 51/79 (64%), Positives = 66/79 (83%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKIL MEI R+R +GKL+LSQKGY EKVL F M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 703 AKKILSMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 762
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY+SAVG++M
Sbjct: 763 YDIEYMSRVPYSSAVGSLM 781
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 108 bits (269), Expect = 2e-21
Identities = 51/79 (64%), Positives = 65/79 (82%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI R+R +GKL+LSQKGY EKVL F M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 925 AKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 984
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY S VG++M
Sbjct: 985 YDIEYMSRVPYLSVVGSLM 1003
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 107 bits (268), Expect = 3e-21
Identities = 51/79 (64%), Positives = 66/79 (83%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI R+R +GKL+LSQKGY EKVL F M +KPV+TPLAAHF+LS+ L P ++
Sbjct: 1018 AKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSD 1077
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY+SAVG++M
Sbjct: 1078 YDIEYMSRVPYSSAVGSLM 1096
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 107 bits (267), Expect = 4e-21
Identities = 52/79 (65%), Positives = 65/79 (82%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI RDRK+G LFLSQ Y +KVL+ F MQ++K V+TP+A HFKLSAA P T+
Sbjct: 1049 AKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTD 1108
Query: 59 EEVEHMSCVPYASAVGNIM 3
E+E+MS VPY+SAVG++M
Sbjct: 1109 AEIEYMSRVPYSSAVGSLM 1127
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 106 bits (264), Expect = 8e-21
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILG+EI ++R +GKL+LSQKGY EKVL F M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 852 AKKILGIEITKERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 911
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY+S VG++M
Sbjct: 912 YDIEYMSRVPYSSVVGSLM 930
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 105 bits (263), Expect = 1e-20
Identities = 51/79 (64%), Positives = 65/79 (82%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI R R + KL+LSQKGY EKVL F M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 1253 AKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 1312
Query: 59 EEVEHMSCVPYASAVGNIM 3
++E+MS VPY+SAVG++M
Sbjct: 1313 YDIEYMSRVPYSSAVGSLM 1331
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 105 bits (262), Expect = 1e-20
Identities = 50/79 (63%), Positives = 64/79 (81%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI R+R + KL+LSQKGY EKV F M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 895 AKKILGMEITRERHSDKLYLSQKGYIEKVFRRFNMHDAKPVSTPLAAHFRLSSDLCPQSD 954
Query: 59 EEVEHMSCVPYASAVGNIM 3
+E+MS VPY+SAVG++M
Sbjct: 955 YNIEYMSRVPYSSAVGSLM 973
>emb|CBG76267.1| OO_Ba0005L10-OO_Ba0081K17.18 [Oryza officinalis]
Length = 472
Score = 105 bits (262), Expect = 1e-20
Identities = 49/79 (62%), Positives = 67/79 (84%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILG+EI R+R++G+L+LSQKGY EKVL HF M +KPV+TPLAAHF+LS+ L PQ++
Sbjct: 266 AKKILGIEITRERQSGELYLSQKGYIEKVLHHFNMHDAKPVSTPLAAHFRLSSDLCPQSD 325
Query: 59 EEVEHMSCVPYASAVGNIM 3
+V++MS V Y+SA G++M
Sbjct: 326 YDVKYMSRVSYSSAAGSLM 344
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 105 bits (261), Expect = 2e-20
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI RDRK+G LFLSQ Y +KVL+ F MQ++K V+TP+A HFKLSAA P +
Sbjct: 1047 AKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSID 1106
Query: 59 EEVEHMSCVPYASAVGNIM 3
E+E+MS VPY+SAVG++M
Sbjct: 1107 AEIEYMSRVPYSSAVGSLM 1125
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 105 bits (261), Expect = 2e-20
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI RDRK+G LFLSQ Y +KVL+ F MQ++K V+TP+A HFKLSAA P +
Sbjct: 1047 AKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSID 1106
Query: 59 EEVEHMSCVPYASAVGNIM 3
E+E+MS VPY+SAVG++M
Sbjct: 1107 AEIEYMSRVPYSSAVGSLM 1125
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 103 bits (258), Expect = 4e-20
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKIL MEI RDRK+G LFLSQ Y +KVL+ F MQ++K V+TP+A HFKLSAA P T+
Sbjct: 1047 AKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTD 1106
Query: 59 EEVEHMSCVPYASAVGNIM 3
E+E+MS VPY+SAVG++M
Sbjct: 1107 AEIEYMSRVPYSSAVGSLM 1125
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 103 bits (258), Expect = 4e-20
Identities = 51/80 (63%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGM-QSSKPVNTPLAAHFKLSAALSPQT 63
A+KILGMEI RDR GK+ L QK Y +KVL+ FGM ++SKPV+TPLA HFKLSA++SP T
Sbjct: 34 ARKILGMEIERDRAKGKISLCQKQYLKKVLQRFGMNENSKPVSTPLAPHFKLSASMSPNT 93
Query: 62 EEEVEHMSCVPYASAVGNIM 3
+EE +M+ +PYASAVG++M
Sbjct: 94 DEESHYMAQIPYASAVGSLM 113
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 103 bits (257), Expect = 5e-20
Identities = 50/79 (63%), Positives = 63/79 (79%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI RDR +G LFLSQ+ Y +KVL+ F M +KPV+TP+A HFKLSA T+
Sbjct: 1036 AKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTD 1095
Query: 59 EEVEHMSCVPYASAVGNIM 3
E+VE+MS VPY+SAVG++M
Sbjct: 1096 EDVEYMSRVPYSSAVGSLM 1114
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 103 bits (256), Expect = 7e-20
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
A+KILGMEI RDR+ KLFLSQ+ Y +KVL FGM SSKP++TP AA+ L+A +PQ+E
Sbjct: 1022 ARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSE 1081
Query: 59 EEVEHMSCVPYASAVGNIM 3
EE E+MS VPYASAVG++M
Sbjct: 1082 EEKEYMSRVPYASAVGSLM 1100
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 102 bits (254), Expect = 1e-19
Identities = 50/79 (63%), Positives = 62/79 (78%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI RD G LFLSQ+ Y +KVLEHF M +KP++TP+AAHFKLSA T+
Sbjct: 369 AKKILGMEITRDINFGLLFLSQQSYIKKVLEHFNMHDAKPISTPIAAHFKLSALQCASTD 428
Query: 59 EEVEHMSCVPYASAVGNIM 3
E+V +MS VPY+SAVG++M
Sbjct: 429 EDVGYMSRVPYSSAVGSLM 447
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 102 bits (254), Expect = 1e-19
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQSSKPVNTPLAAHFKLSAALSPQTE 60
AKKILGMEI RDR G L+LSQ+ Y EKVLE F M ++KPV+TPL +HFKLS L PQ+E
Sbjct: 899 AKKILGMEIWRDRSKGVLYLSQRRYIEKVLERFSMNNAKPVSTPLGSHFKLSKELCPQSE 958
Query: 59 EEVEHMSCVPYASAVGNIM 3
EE M+ +PY SAVG++M
Sbjct: 959 EEERAMAHIPYTSAVGSVM 977
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 102 bits (253), Expect = 1e-19
Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 AKKILGMEIRRDRKAGKLFLSQKGYFEKVLEHFGMQS-SKPVNTPLAAHFKLSAALSPQT 63
AKKILGMEI RDR+ GKL L+QK Y +KVL+ FG+ SKPV+TPLA H KLS+ LSP+T
Sbjct: 119 AKKILGMEISRDRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKT 178
Query: 62 EEEVEHMSCVPYASAVGNIM 3
+EE E+M+ VPYA+AVG++M
Sbjct: 179 DEEREYMAKVPYANAVGSLM 198