BLASTX nr result

ID: Cinnamomum24_contig00034435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00034435
         (431 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70268.1| hypothetical protein VITISV_016147 [Vitis vinifera]    60   5e-07
ref|XP_010649503.1| PREDICTED: uncharacterized protein LOC104879...    59   2e-06

>emb|CAN70268.1| hypothetical protein VITISV_016147 [Vitis vinifera]
          Length = 242

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
 Frame = -2

Query: 412 KIVSKSLNPAFSAASE-------RNSIDSLLQSVISDGSPEKNIIEEVS--NPXXXXXXX 260
           KI  KSLN AF+  SE        +SID L  S + DG+  +  IE V   NP       
Sbjct: 34  KITKKSLNAAFADVSEDVSQESTSDSIDFLRISGVFDGNRHRESIESVKVLNPALSTSSE 93

Query: 259 XXXXXXXSPATEI---EHXXXXXXXXXXXXXXXXXXRTENVEVQVAVDLLLQAREQVVNS 89
                  +P+++I   ++                  + E++E ++ V+LL QAR QV+NS
Sbjct: 94  TSALFDIAPSSKISTKKNELENVLVESYGMAGSDGLKIESLEAEIVVELLTQARAQVLNS 153

Query: 88  VDVDRRSKKIVDDLIKSVIE 29
            D D RSK+++D LIK +I+
Sbjct: 154 SDTDIRSKRLLDTLIKIIID 173


>ref|XP_010649503.1| PREDICTED: uncharacterized protein LOC104879203 [Vitis vinifera]
          Length = 227

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
 Frame = -2

Query: 412 KIVSKSLNPAFSAASE-------RNSIDSLLQSVISDGSPEKNIIEEVS--NPXXXXXXX 260
           KI  KSLN AF+  SE        +SID    S + DG+  +  IE V   NP       
Sbjct: 34  KITKKSLNAAFADVSEDVSQESTSDSIDFSPVSEVFDGNRHRESIESVKVLNPALSTSSE 93

Query: 259 XXXXXXXSPATEI---EHXXXXXXXXXXXXXXXXXXRTENVEVQVAVDLLLQAREQVVNS 89
                  +P+++I   ++                  + E++E ++ V+LL QAR QV+NS
Sbjct: 94  TSALFDIAPSSKISTKKNELENVLVESYGMAGSDGLKIESLEAEIVVELLTQARAQVLNS 153

Query: 88  VDVDRRSKKIVDDLIKSVIE 29
            D D RSK+++D LIK +I+
Sbjct: 154 SDTDIRSKRLLDTLIKIIID 173


Top