BLASTX nr result

ID: Cinnamomum24_contig00034354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00034354
         (305 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010664012.1| PREDICTED: RNA-binding protein 24-A isoform ...   105   1e-20
ref|XP_010664015.1| PREDICTED: deleted in azoospermia-like isofo...   105   1e-20
ref|XP_010270570.1| PREDICTED: RNA-binding protein 24-A [Nelumbo...   104   2e-20
ref|XP_010266283.1| PREDICTED: RNA-binding protein 38-like [Nelu...   104   3e-20
ref|XP_012073568.1| PREDICTED: RNA-binding protein 24-A [Jatroph...   104   3e-20
ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family prot...   103   5e-20
ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobr...   103   5e-20
gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-184...   103   7e-20
ref|NP_565132.2| RNA recognition motif-containing protein [Arabi...   103   7e-20
ref|XP_010539768.1| PREDICTED: RNA-binding protein 24-A-like iso...   102   1e-19
ref|XP_010539767.1| PREDICTED: RNA-binding protein 24-A-like iso...   102   1e-19
ref|XP_010539766.1| PREDICTED: RNA-binding protein 38-like isofo...   102   1e-19
ref|XP_010539765.1| PREDICTED: RNA-binding protein 38-like isofo...   102   1e-19
gb|KDO85241.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   101   3e-19
gb|KDO85240.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   101   3e-19
gb|KDO85238.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   101   3e-19
ref|XP_006473858.1| PREDICTED: RNA-binding protein 24-B-like iso...   101   3e-19
ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like iso...   101   3e-19
ref|XP_006435451.1| hypothetical protein CICLE_v10003364mg [Citr...   101   3e-19
gb|KHG27980.1| RNA-binding 24 [Gossypium arboreum]                    100   4e-19

>ref|XP_010664012.1| PREDICTED: RNA-binding protein 24-A isoform X1 [Vitis vinifera]
           gi|731427534|ref|XP_010664014.1| PREDICTED: RNA-binding
           protein 24-A isoform X1 [Vitis vinifera]
          Length = 285

 Score =  105 bits (262), Expect = 1e-20
 Identities = 53/71 (74%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QPIP             FQFLNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQPIPGPSSGSSSSSG--FQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_010664015.1| PREDICTED: deleted in azoospermia-like isoform X2 [Vitis vinifera]
           gi|297745603|emb|CBI40768.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  105 bits (262), Expect = 1e-20
 Identities = 53/71 (74%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QPIP             FQFLNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQPIPGPSSGSSSSSG--FQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_010270570.1| PREDICTED: RNA-binding protein 24-A [Nelumbo nucifera]
          Length = 286

 Score =  104 bits (260), Expect = 2e-20
 Identities = 53/71 (74%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MAF  IP            GFQFLNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAFIAIPGSGSGSGSSLNSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 61  LEAVVITDKNT 71


>ref|XP_010266283.1| PREDICTED: RNA-binding protein 38-like [Nelumbo nucifera]
          Length = 287

 Score =  104 bits (259), Expect = 3e-20
 Identities = 52/71 (73%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+  IP            GFQFLNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYATIPGTGSGSVSSSNSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 61  LEAVVITDKNT 71


>ref|XP_012073568.1| PREDICTED: RNA-binding protein 24-A [Jatropha curcas]
           gi|643728805|gb|KDP36742.1| hypothetical protein
           JCGZ_08033 [Jatropha curcas]
          Length = 285

 Score =  104 bits (259), Expect = 3e-20
 Identities = 52/71 (73%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QPIP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQPIPGPSSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
           [Theobroma cacao] gi|508723992|gb|EOY15889.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao]
          Length = 284

 Score =  103 bits (257), Expect = 5e-20
 Identities = 51/71 (71%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QPIP             FQ++NSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQPIPGPSSGSSSSSG--FQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508723991|gb|EOY15888.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 319

 Score =  103 bits (257), Expect = 5e-20
 Identities = 51/71 (71%), Positives = 57/71 (80%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QPIP             FQ++NSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQPIPGPSSGSSSSSG--FQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-18423 [Arabidopsis thaliana]
           gi|12323977|gb|AAG51948.1|AC015450_9 putative
           RNA-binding protein; 24808-23340 [Arabidopsis thaliana]
          Length = 279

 Score =  103 bits (256), Expect = 7e-20
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QP+P             F +LNSPFGDTT+TKVFVGGLAWETQSETLRQHFEQ+GEI
Sbjct: 1   MAYQPVPGSG----------FHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEI 50

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 51  LEAVVIADKNT 61


>ref|NP_565132.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332197724|gb|AEE35845.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 285

 Score =  103 bits (256), Expect = 7e-20
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QP+P             F +LNSPFGDTT+TKVFVGGLAWETQSETLRQHFEQ+GEI
Sbjct: 1   MAYQPVPGSG----------FHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEI 50

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 51  LEAVVIADKNT 61


>ref|XP_010539768.1| PREDICTED: RNA-binding protein 24-A-like isoform X4 [Tarenaya
           hassleriana]
          Length = 278

 Score =  102 bits (254), Expect = 1e-19
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QP+P             F +LNSPFGDTT+TKVFVGGLAWETQSETLR+HFEQ+GEI
Sbjct: 1   MAYQPVPSSG----------FHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEI 50

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 51  LEAVVITDKNT 61


>ref|XP_010539767.1| PREDICTED: RNA-binding protein 24-A-like isoform X3 [Tarenaya
           hassleriana]
          Length = 280

 Score =  102 bits (254), Expect = 1e-19
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QP+P             F +LNSPFGDTT+TKVFVGGLAWETQSETLR+HFEQ+GEI
Sbjct: 1   MAYQPVPSSG----------FHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEI 50

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 51  LEAVVITDKNT 61


>ref|XP_010539766.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Tarenaya
           hassleriana]
          Length = 298

 Score =  102 bits (254), Expect = 1e-19
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QP+P             F +LNSPFGDTT+TKVFVGGLAWETQSETLR+HFEQ+GEI
Sbjct: 1   MAYQPVPSSG----------FHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEI 50

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 51  LEAVVITDKNT 61


>ref|XP_010539765.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Tarenaya
           hassleriana]
          Length = 300

 Score =  102 bits (254), Expect = 1e-19
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+QP+P             F +LNSPFGDTT+TKVFVGGLAWETQSETLR+HFEQ+GEI
Sbjct: 1   MAYQPVPSSG----------FHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEI 50

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 51  LEAVVITDKNT 61


>gb|KDO85241.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
           gi|641866557|gb|KDO85242.1| hypothetical protein
           CISIN_1g023475mg [Citrus sinensis]
           gi|641866558|gb|KDO85243.1| hypothetical protein
           CISIN_1g023475mg [Citrus sinensis]
          Length = 264

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+Q IP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>gb|KDO85240.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
          Length = 258

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+Q IP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>gb|KDO85238.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
          Length = 261

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+Q IP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_006473858.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Citrus
           sinensis] gi|568839785|ref|XP_006473859.1| PREDICTED:
           RNA-binding protein 24-B-like isoform X3 [Citrus
           sinensis] gi|568839787|ref|XP_006473860.1| PREDICTED:
           RNA-binding protein 24-B-like isoform X4 [Citrus
           sinensis]
          Length = 163

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+Q IP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Citrus
           sinensis] gi|641866554|gb|KDO85239.1| hypothetical
           protein CISIN_1g023475mg [Citrus sinensis]
          Length = 281

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+Q IP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>ref|XP_006435451.1| hypothetical protein CICLE_v10003364mg [Citrus clementina]
           gi|557537573|gb|ESR48691.1| hypothetical protein
           CICLE_v10003364mg [Citrus clementina]
          Length = 268

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MA+Q IP             FQ+LNSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           LEAVVI DKNT
Sbjct: 59  LEAVVITDKNT 69


>gb|KHG27980.1| RNA-binding 24 [Gossypium arboreum]
          Length = 372

 Score =  100 bits (249), Expect = 4e-19
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -2

Query: 214 MAFQPIPXXXXXXXXXXXXGFQFLNSPFGDTTYTKVFVGGLAWETQSETLRQHFEQFGEI 35
           MAFQ IP             FQ++NSPFGDTTYTKVFVGGLAWETQSET+R++FEQFGEI
Sbjct: 1   MAFQQIPGPSSGSSSSSG--FQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 34  LEAVVINDKNT 2
           +EAVVI DKNT
Sbjct: 59  VEAVVITDKNT 69


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