BLASTX nr result
ID: Cinnamomum24_contig00034144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00034144
(272 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010650328.1| PREDICTED: small subunit processome componen... 124 2e-26
ref|XP_010650327.1| PREDICTED: small subunit processome componen... 124 2e-26
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 124 2e-26
ref|XP_012455020.1| PREDICTED: small subunit processome componen... 123 5e-26
ref|XP_012455019.1| PREDICTED: small subunit processome componen... 123 5e-26
gb|KJB68808.1| hypothetical protein B456_011G152900 [Gossypium r... 123 5e-26
gb|KJB68807.1| hypothetical protein B456_011G152900 [Gossypium r... 123 5e-26
gb|KJB68806.1| hypothetical protein B456_011G152900 [Gossypium r... 123 5e-26
ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prun... 122 1e-25
ref|XP_008228625.1| PREDICTED: small subunit processome componen... 121 2e-25
ref|XP_008228596.1| PREDICTED: small subunit processome componen... 120 4e-25
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 114 2e-23
ref|XP_010068998.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 112 8e-23
gb|KCW57219.1| hypothetical protein EUGRSUZ_H00031 [Eucalyptus g... 112 8e-23
ref|XP_012071266.1| PREDICTED: small subunit processome componen... 111 2e-22
ref|XP_010673398.1| PREDICTED: small subunit processome componen... 111 2e-22
ref|XP_010257842.1| PREDICTED: small subunit processome componen... 111 2e-22
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 110 5e-22
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 110 5e-22
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 110 5e-22
>ref|XP_010650328.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Vitis vinifera]
Length = 2710
Score = 124 bits (312), Expect = 2e-26
Identities = 61/88 (69%), Positives = 76/88 (86%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE VSFLLRNAP EQLI+G++K+++E VKKPL +RK+GV AL + MRGTSSR HS+A
Sbjct: 201 AEAVSFLLRNAPVEQLIKGVRKIMLEAVKKPLLMRKSGVCALFYYAMRGTSSRFHSRAEK 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLLMD+SI+GIGD+FTQGSD+V EVI
Sbjct: 261 VLRLLMDSSIVGIGDEFTQGSDSVAEVI 288
>ref|XP_010650327.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Vitis vinifera]
Length = 2710
Score = 124 bits (312), Expect = 2e-26
Identities = 61/88 (69%), Positives = 76/88 (86%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE VSFLLRNAP EQLI+G++K+++E VKKPL +RK+GV AL + MRGTSSR HS+A
Sbjct: 201 AEAVSFLLRNAPVEQLIKGVRKIMLEAVKKPLLMRKSGVCALFYYAMRGTSSRFHSRAEK 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLLMD+SI+GIGD+FTQGSD+V EVI
Sbjct: 261 VLRLLMDSSIVGIGDEFTQGSDSVAEVI 288
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 124 bits (312), Expect = 2e-26
Identities = 61/88 (69%), Positives = 76/88 (86%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE VSFLLRNAP EQLI+G++K+++E VKKPL +RK+GV AL + MRGTSSR HS+A
Sbjct: 201 AEAVSFLLRNAPVEQLIKGVRKIMLEAVKKPLLMRKSGVCALFYYAMRGTSSRFHSRAEK 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLLMD+SI+GIGD+FTQGSD+V EVI
Sbjct: 261 VLRLLMDSSIVGIGDEFTQGSDSVAEVI 288
>ref|XP_012455020.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Gossypium raimondii]
Length = 2724
Score = 123 bits (309), Expect = 5e-26
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQLI+GI+K + EVVKKPLP+RK+GVSALL +IM GTSSR HS A
Sbjct: 201 AEATSFLLRNAPVEQLIKGIRKTMFEVVKKPLPIRKSGVSALLCYIMLGTSSRFHSGAQR 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLL+DNSI IGDKF +GSD ++EV+
Sbjct: 261 VLRLLVDNSIFAIGDKFPEGSDAILEVV 288
>ref|XP_012455019.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Gossypium raimondii]
Length = 2726
Score = 123 bits (309), Expect = 5e-26
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQLI+GI+K + EVVKKPLP+RK+GVSALL +IM GTSSR HS A
Sbjct: 201 AEATSFLLRNAPVEQLIKGIRKTMFEVVKKPLPIRKSGVSALLCYIMLGTSSRFHSGAQR 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLL+DNSI IGDKF +GSD ++EV+
Sbjct: 261 VLRLLVDNSIFAIGDKFPEGSDAILEVV 288
>gb|KJB68808.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2712
Score = 123 bits (309), Expect = 5e-26
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQLI+GI+K + EVVKKPLP+RK+GVSALL +IM GTSSR HS A
Sbjct: 201 AEATSFLLRNAPVEQLIKGIRKTMFEVVKKPLPIRKSGVSALLCYIMLGTSSRFHSGAQR 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLL+DNSI IGDKF +GSD ++EV+
Sbjct: 261 VLRLLVDNSIFAIGDKFPEGSDAILEVV 288
>gb|KJB68807.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2655
Score = 123 bits (309), Expect = 5e-26
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQLI+GI+K + EVVKKPLP+RK+GVSALL +IM GTSSR HS A
Sbjct: 188 AEATSFLLRNAPVEQLIKGIRKTMFEVVKKPLPIRKSGVSALLCYIMLGTSSRFHSGAQR 247
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLL+DNSI IGDKF +GSD ++EV+
Sbjct: 248 VLRLLVDNSIFAIGDKFPEGSDAILEVV 275
>gb|KJB68806.1| hypothetical protein B456_011G152900 [Gossypium raimondii]
Length = 2668
Score = 123 bits (309), Expect = 5e-26
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQLI+GI+K + EVVKKPLP+RK+GVSALL +IM GTSSR HS A
Sbjct: 201 AEATSFLLRNAPVEQLIKGIRKTMFEVVKKPLPIRKSGVSALLCYIMLGTSSRFHSGAQR 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLL+DNSI IGDKF +GSD ++EV+
Sbjct: 261 VLRLLVDNSIFAIGDKFPEGSDAILEVV 288
>ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
gi|462411042|gb|EMJ16091.1| hypothetical protein
PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 122 bits (305), Expect = 1e-25
Identities = 62/88 (70%), Positives = 74/88 (84%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE +SFLLRNAP EQL +G+KKV+ EVVKK +PVRK GVSALL +MRGTSSR HSKA
Sbjct: 201 AEGMSFLLRNAPFEQLKEGVKKVMFEVVKKSIPVRKCGVSALLYFVMRGTSSRFHSKAEQ 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L LLMD+ ILGIG+ F++GSDTVVEV+
Sbjct: 261 VLHLLMDDLILGIGENFSKGSDTVVEVL 288
>ref|XP_008228625.1| PREDICTED: small subunit processome component 20 homolog [Prunus
mume]
Length = 2725
Score = 121 bits (304), Expect = 2e-25
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE +SFLLRNAP EQL +G+KKV+ EVVKK +PVRK GVSALL +MRGTSSR HSKA
Sbjct: 201 AEGMSFLLRNAPFEQLKEGVKKVMFEVVKKSIPVRKCGVSALLYFVMRGTSSRFHSKAEQ 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L LLMDN ILGIG+ ++GSDTVVEV+
Sbjct: 261 VLHLLMDNLILGIGENISKGSDTVVEVL 288
>ref|XP_008228596.1| PREDICTED: small subunit processome component 20 homolog [Prunus
mume]
Length = 2723
Score = 120 bits (301), Expect = 4e-25
Identities = 61/88 (69%), Positives = 74/88 (84%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE +SFLLRNAP EQL +G+KK++ EVV+K +PVRK GVSALL +MRGTSSR HSKA
Sbjct: 201 AEGMSFLLRNAPFEQLKKGVKKIMFEVVQKSIPVRKYGVSALLYFVMRGTSSRFHSKAEQ 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L LLMD+ ILGIG+ F+QGSDTVVEV+
Sbjct: 261 VLHLLMDDLILGIGENFSQGSDTVVEVL 288
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 114 bits (286), Expect = 2e-23
Identities = 55/88 (62%), Positives = 71/88 (80%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQLI+GI+K++ EV K PLP+RK+GVSALL ++M GTSSR HS A
Sbjct: 201 AEATSFLLRNAPVEQLIKGIRKIMFEVTKNPLPIRKSGVSALLCYVMLGTSSRFHSGAER 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L+LL+DNSI IG+K +GSD ++EV+
Sbjct: 261 VLQLLVDNSIFAIGEKCPEGSDAILEVV 288
>ref|XP_010068998.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component
20 homolog [Eucalyptus grandis]
Length = 2689
Score = 112 bits (281), Expect = 8e-23
Identities = 55/88 (62%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE +SFLLRNAP E+LI+G++K++ +VVKK RKAGVSAL+ + MRGTS + HSKA
Sbjct: 201 AEAMSFLLRNAPVEELIKGVRKLMFDVVKKQSVERKAGVSALVYYTMRGTSLKFHSKAER 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L++L+DNSI IGDKFT+G+DT+VEVI
Sbjct: 261 VLQILLDNSIFRIGDKFTEGADTIVEVI 288
>gb|KCW57219.1| hypothetical protein EUGRSUZ_H00031 [Eucalyptus grandis]
Length = 2058
Score = 112 bits (281), Expect = 8e-23
Identities = 55/88 (62%), Positives = 73/88 (82%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE +SFLLRNAP E+LI+G++K++ +VVKK RKAGVSAL+ + MRGTS + HSKA
Sbjct: 2 AEAMSFLLRNAPVEELIKGVRKLMFDVVKKQSVERKAGVSALVYYTMRGTSLKFHSKAER 61
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L++L+DNSI IGDKFT+G+DT+VEVI
Sbjct: 62 VLQILLDNSIFRIGDKFTEGADTIVEVI 89
>ref|XP_012071266.1| PREDICTED: small subunit processome component 20 homolog [Jatropha
curcas]
Length = 2657
Score = 111 bits (278), Expect = 2e-22
Identities = 57/88 (64%), Positives = 70/88 (79%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP EQL +GI+K++ EVVKKPL RK+GVSALL HIMRGTSSR HS+A
Sbjct: 143 AEATSFLLRNAPKEQLRKGIRKIMFEVVKKPLLTRKSGVSALLYHIMRGTSSRFHSRADR 202
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L+LL +NSI I +KF Q D+V+EV+
Sbjct: 203 VLQLLTENSIFTISEKFDQDVDSVIEVL 230
>ref|XP_010673398.1| PREDICTED: small subunit processome component 20 homolog [Beta
vulgaris subsp. vulgaris] gi|870863685|gb|KMT14840.1|
hypothetical protein BVRB_3g065640 isoform A [Beta
vulgaris subsp. vulgaris]
Length = 2688
Score = 111 bits (277), Expect = 2e-22
Identities = 52/88 (59%), Positives = 71/88 (80%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE +SFL+RNAPT+QL++G++K+L E +KP P + GVSALL HIMRGTSS+ HS+A
Sbjct: 203 AEALSFLMRNAPTQQLVKGVRKILCEAARKPSPTKNFGVSALLWHIMRGTSSKFHSRAGR 262
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+LRLL+++ L IGD+F QGS+TV EV+
Sbjct: 263 VLRLLINDRNLSIGDRFNQGSETVTEVV 290
>ref|XP_010257842.1| PREDICTED: small subunit processome component 20 homolog [Nelumbo
nucifera]
Length = 2710
Score = 111 bits (277), Expect = 2e-22
Identities = 56/88 (63%), Positives = 72/88 (81%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
A+ +SFLLRNAP +QL +GI+K++ EVVK+P VRK+GVSALL + MRGT SRLHS+A
Sbjct: 201 ADAISFLLRNAPEKQLKKGIRKIINEVVKRPSDVRKSGVSALLWYTMRGTPSRLHSRAEQ 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L LL++NSI IGDK QGSDT+VEV+
Sbjct: 261 VLLLLVNNSIFEIGDKSAQGSDTIVEVV 288
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 110 bits (274), Expect = 5e-22
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP ++L GI+K+++EVVKK P RK+GVSALL ++MRGTSS +HS A
Sbjct: 201 AEATSFLLRNAPFKKLKAGIQKIMLEVVKKQSPARKSGVSALLYYVMRGTSSGVHSSAER 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L+LL+ S+ IGDKF QGSDT+VEV+
Sbjct: 261 VLKLLISQSVFSIGDKFNQGSDTIVEVL 288
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 110 bits (274), Expect = 5e-22
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP ++L GI+K+++EVVKK P RK+GVSALL ++MRGTSS +HS A
Sbjct: 201 AEATSFLLRNAPFKKLKAGIQKIMLEVVKKQSPARKSGVSALLYYVMRGTSSGVHSSAER 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L+LL+ S+ IGDKF QGSDT+VEV+
Sbjct: 261 VLKLLISQSVFSIGDKFNQGSDTIVEVL 288
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 110 bits (274), Expect = 5e-22
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = -1
Query: 272 AEVVSFLLRNAPTEQLIQGIKKVLIEVVKKPLPVRKAGVSALLLHIMRGTSSRLHSKAVD 93
AE SFLLRNAP ++L GI+K+++EVVKK P RK+GVSALL ++MRGTSS +HS A
Sbjct: 201 AEATSFLLRNAPFKKLKAGIQKIMLEVVKKQSPARKSGVSALLYYVMRGTSSGVHSSAER 260
Query: 92 LLRLLMDNSILGIGDKFTQGSDTVVEVI 9
+L+LL+ S+ IGDKF QGSDT+VEV+
Sbjct: 261 VLKLLISQSVFSIGDKFNQGSDTIVEVL 288