BLASTX nr result
ID: Cinnamomum24_contig00033890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00033890
(440 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 82 2e-13
ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 82 2e-13
ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 82 2e-13
emb|CBI37517.3| unnamed protein product [Vitis vinifera] 82 2e-13
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer ... 82 2e-13
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca... 80 6e-13
ref|XP_010546323.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 79 1e-12
ref|XP_010546322.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 79 1e-12
ref|XP_008443145.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 79 1e-12
ref|XP_008443143.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 79 1e-12
ref|XP_011652135.1| PREDICTED: DNA topoisomerase 3-alpha [Cucumi... 78 3e-12
ref|XP_013616695.1| PREDICTED: DNA topoisomerase 3-alpha [Brassi... 77 4e-12
emb|CDY39837.1| BnaC02g42810D [Brassica napus] 77 4e-12
ref|XP_014523290.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 77 5e-12
ref|XP_014523288.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 77 5e-12
ref|XP_011011407.1| PREDICTED: DNA topoisomerase 3-alpha-like is... 77 5e-12
ref|XP_011011406.1| PREDICTED: DNA topoisomerase 3-alpha-like is... 77 5e-12
ref|XP_011031138.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 77 5e-12
ref|XP_011031137.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 77 5e-12
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu... 77 5e-12
>ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Vitis vinifera]
Length = 916
Score = 82.0 bits (201), Expect = 2e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR G ++ +FV+ATG+P+SGRRCF+CGDPSHFANVCPNRG
Sbjct: 870 RGRGRQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 915
>ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vitis vinifera]
Length = 918
Score = 82.0 bits (201), Expect = 2e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR G ++ +FV+ATG+P+SGRRCF+CGDPSHFANVCPNRG
Sbjct: 872 RGRGRQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 917
>ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vitis vinifera]
Length = 919
Score = 82.0 bits (201), Expect = 2e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR G ++ +FV+ATG+P+SGRRCF+CGDPSHFANVCPNRG
Sbjct: 873 RGRGRQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 918
>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 82.0 bits (201), Expect = 2e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR G ++ +FV+ATG+P+SGRRCF+CGDPSHFANVCPNRG
Sbjct: 543 RGRGRQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 588
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer arietinum]
Length = 920
Score = 82.0 bits (201), Expect = 2e-13
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR S++NV+FV+ATG+PISGRRCF+CGDPSHFANVCPNRG
Sbjct: 875 RGRGRNAS-SSSNVTFVSATGDPISGRRCFVCGDPSHFANVCPNRG 919
>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
1 [Theobroma cacao]
Length = 914
Score = 80.1 bits (196), Expect = 6e-13
Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 6/52 (11%)
Frame = -3
Query: 438 RGRGRGEGR------SATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RG GRG GR A +V+FV+ATG+PISGRRC++CGDPSHFANVCPNRG
Sbjct: 862 RGGGRGRGRFGQNGARAADVTFVSATGDPISGRRCYVCGDPSHFANVCPNRG 913
>ref|XP_010546323.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Tarenaya
hassleriana]
Length = 906
Score = 79.0 bits (193), Expect = 1e-12
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGRG GR + SFV+ TGEP+SGRRCF CGDPSHFAN CPNRG
Sbjct: 861 RGRGRG-GRESGGTSFVSVTGEPLSGRRCFSCGDPSHFANACPNRG 905
>ref|XP_010546322.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Tarenaya
hassleriana]
Length = 930
Score = 79.0 bits (193), Expect = 1e-12
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGRG GR + SFV+ TGEP+SGRRCF CGDPSHFAN CPNRG
Sbjct: 885 RGRGRG-GRESGGTSFVSVTGEPLSGRRCFSCGDPSHFANACPNRG 929
>ref|XP_008443145.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Cucumis melo]
Length = 922
Score = 79.0 bits (193), Expect = 1e-12
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR G+ +FV+ATGEPIS RRCF+CGDPSHFANVCPNRG
Sbjct: 876 RGRGRDLGQGQIAATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 921
>ref|XP_008443143.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Cucumis melo]
Length = 938
Score = 79.0 bits (193), Expect = 1e-12
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGR G+ +FV+ATGEPIS RRCF+CGDPSHFANVCPNRG
Sbjct: 892 RGRGRDLGQGQIAATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 937
>ref|XP_011652135.1| PREDICTED: DNA topoisomerase 3-alpha [Cucumis sativus]
gi|700204227|gb|KGN59360.1| hypothetical protein
Csa_3G813290 [Cucumis sativus]
Length = 924
Score = 77.8 bits (190), Expect = 3e-12
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 8/54 (14%)
Frame = -3
Query: 438 RGRGRGEGRSATN--------VSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRGRG GR +FV+ATGEPIS RRCF+CGDPSHFANVCPNRG
Sbjct: 870 RGRGRGRGRDRDRDRGQGQIAATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 923
>ref|XP_013616695.1| PREDICTED: DNA topoisomerase 3-alpha [Brassica oleracea var.
oleracea]
Length = 921
Score = 77.4 bits (189), Expect = 4e-12
Identities = 35/46 (76%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -3
Query: 438 RGRG-RGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNR 304
RG G RGEGR SFV+ATGEP+SGRRCF CGDPSHFAN CPNR
Sbjct: 874 RGGGQRGEGRGGGGTSFVSATGEPVSGRRCFSCGDPSHFANACPNR 919
>emb|CDY39837.1| BnaC02g42810D [Brassica napus]
Length = 924
Score = 77.4 bits (189), Expect = 4e-12
Identities = 35/46 (76%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -3
Query: 438 RGRG-RGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNR 304
RG G RGEGR SFV+ATGEP+SGRRCF CGDPSHFAN CPNR
Sbjct: 877 RGGGQRGEGRGGGGTSFVSATGEPVSGRRCFSCGDPSHFANACPNR 922
>ref|XP_014523290.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vigna radiata var.
radiata]
Length = 716
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG G A +FV+ATG+PISGRRCF CGDPSHFANVCPNRG
Sbjct: 670 RGRGGQTGAHAAATTFVSATGDPISGRRCFRCGDPSHFANVCPNRG 715
>ref|XP_014523288.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vigna radiata var.
radiata] gi|951063491|ref|XP_014523289.1| PREDICTED: DNA
topoisomerase 3-alpha isoform X1 [Vigna radiata var.
radiata]
Length = 907
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG G A +FV+ATG+PISGRRCF CGDPSHFANVCPNRG
Sbjct: 861 RGRGGQTGAHAAATTFVSATGDPISGRRCFRCGDPSHFANVCPNRG 906
>ref|XP_011011407.1| PREDICTED: DNA topoisomerase 3-alpha-like isoform X2 [Populus
euphratica]
Length = 918
Score = 77.0 bits (188), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG A +V+FV+ATGEPISGRRCF+CGDPSHFAN CP+RG
Sbjct: 872 RGRGVQNAGRAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 917
>ref|XP_011011406.1| PREDICTED: DNA topoisomerase 3-alpha-like isoform X1 [Populus
euphratica]
Length = 919
Score = 77.0 bits (188), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG A +V+FV+ATGEPISGRRCF+CGDPSHFAN CP+RG
Sbjct: 873 RGRGVQNAGRAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 918
>ref|XP_011031138.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Populus euphratica]
Length = 918
Score = 77.0 bits (188), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG A +V+FV+ATGEPISGRRCF+CGDPSHFAN CP+RG
Sbjct: 872 RGRGVQNAGRAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 917
>ref|XP_011031137.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Populus euphratica]
Length = 919
Score = 77.0 bits (188), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG A +V+FV+ATGEPISGRRCF+CGDPSHFAN CP+RG
Sbjct: 873 RGRGVQNAGRAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 918
>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| hypothetical protein
POPTR_0005s06810g [Populus trichocarpa]
Length = 910
Score = 77.0 bits (188), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 438 RGRGRGEGRSATNVSFVTATGEPISGRRCFICGDPSHFANVCPNRG 301
RGRG A +V+FV+ATGEPISGRRCF+CGDPSHFAN CP+RG
Sbjct: 864 RGRGVQNAGRAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 909