BLASTX nr result

ID: Cinnamomum24_contig00033657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00033657
         (259 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010930167.1| PREDICTED: pentatricopeptide repeat-containi...    77   5e-12
ref|XP_010930166.1| PREDICTED: pentatricopeptide repeat-containi...    77   5e-12
ref|XP_008804184.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_008804183.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_009401150.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_011628755.1| PREDICTED: uncharacterized protein LOC184485...    57   5e-06
gb|ERN20102.1| hypothetical protein AMTR_s00066p00041260 [Ambore...    57   5e-06

>ref|XP_010930167.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Elaeis guineensis]
          Length = 1005

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 44/86 (51%), Positives = 54/86 (62%)
 Frame = -2

Query: 258 SDLGDTDFCNSGNGVLSDRDNRLGETVSMEDFAFLNESVVDYDAAGSPDSSSCKYSDEAV 79
           S L D DF    NG   DRD+R G +VS +DFAFL E++ + DA       S K+S+EAV
Sbjct: 61  SGLIDPDFSPPWNGEYRDRDDRRGASVSPKDFAFLQEAIAERDALPGNTLDSGKFSEEAV 120

Query: 78  LIADRIRGCNGVDFDDKTQKLLRQFR 1
           LIA  +R   GV F DKT+K LRQFR
Sbjct: 121 LIAKAVRTSGGV-FSDKTEKFLRQFR 145


>ref|XP_010930166.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X1 [Elaeis guineensis]
          Length = 1015

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 44/86 (51%), Positives = 54/86 (62%)
 Frame = -2

Query: 258 SDLGDTDFCNSGNGVLSDRDNRLGETVSMEDFAFLNESVVDYDAAGSPDSSSCKYSDEAV 79
           S L D DF    NG   DRD+R G +VS +DFAFL E++ + DA       S K+S+EAV
Sbjct: 61  SGLIDPDFSPPWNGEYRDRDDRRGASVSPKDFAFLQEAIAERDALPGNTLDSGKFSEEAV 120

Query: 78  LIADRIRGCNGVDFDDKTQKLLRQFR 1
           LIA  +R   GV F DKT+K LRQFR
Sbjct: 121 LIAKAVRTSGGV-FSDKTEKFLRQFR 145


>ref|XP_008804184.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Phoenix dactylifera]
           gi|672168365|ref|XP_008804185.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X2 [Phoenix dactylifera]
          Length = 1012

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = -2

Query: 252 LGDTDFCNSGNGVLSDRDNRLGETVSMEDFAFLNESVVDYDAAGSPDSSSCKYSDEAVLI 73
           L D +F    NG   DR++  G +VS +DFAFL E++ + DA       S K+S+EA+LI
Sbjct: 63  LVDPEFSPPWNGACRDREDCRGASVSPKDFAFLQEAIAERDALPGKTLDSGKFSEEAILI 122

Query: 72  ADRIRGCNGVDFDDKTQKLLRQFR 1
           A  +R   GV F+DKT+K LRQFR
Sbjct: 123 AKAVRASGGV-FNDKTEKFLRQFR 145


>ref|XP_008804183.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial isoform X1 [Phoenix dactylifera]
          Length = 1012

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = -2

Query: 252 LGDTDFCNSGNGVLSDRDNRLGETVSMEDFAFLNESVVDYDAAGSPDSSSCKYSDEAVLI 73
           L D +F    NG   DR++  G +VS +DFAFL E++ + DA       S K+S+EA+LI
Sbjct: 63  LVDPEFSPPWNGACRDREDCRGASVSPKDFAFLQEAIAERDALPGKTLDSGKFSEEAILI 122

Query: 72  ADRIRGCNGVDFDDKTQKLLRQFR 1
           A  +R   GV F+DKT+K LRQFR
Sbjct: 123 AKAVRASGGV-FNDKTEKFLRQFR 145


>ref|XP_009401150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 1018

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -2

Query: 255 DLGDTDFCNSGNGVLSDRDNRLGETVSMEDFAFLNESVV-DYDAAGSPDSSSCKYSDEAV 79
           +L D  F    +G   DR+NR   +VSM+DF FL E+ V D +   +    + K S EAV
Sbjct: 64  ELNDPGFVVPWDGASHDRENRQEASVSMKDFTFLQEAAVEDRETLAAKPLDAGKSSKEAV 123

Query: 78  LIADRIRGCNGVDFDDKTQKLLRQFR 1
           LIA  +R  +G +FDD T+K+LR+FR
Sbjct: 124 LIAKVVR-ASGSNFDDNTEKILRRFR 148


>ref|XP_011628755.1| PREDICTED: uncharacterized protein LOC18448513 [Amborella
           trichopoda]
          Length = 2422

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = -2

Query: 258 SDLGDTDFC-NSGNGVLSDRDNRLGETVSMEDFAFLNESVVDYDAAGSPDSSSC---KYS 91
           S LGD+DFC N GNG L      +      E+F+FL +S+ DYDA    + +     K+S
Sbjct: 48  SGLGDSDFCINGGNGSLEVPVEMISRPAH-EEFSFLFQSIYDYDADFMKNEAKLHPGKFS 106

Query: 90  DEAVLIADRIRGCNGVDFDDKTQKLLRQFR 1
           DEA+L+ + IR  NG ++ D+  K LR FR
Sbjct: 107 DEALLLCELIR-TNGTNWGDEMPKSLRPFR 135


>gb|ERN20102.1| hypothetical protein AMTR_s00066p00041260 [Amborella trichopoda]
          Length = 1046

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = -2

Query: 258 SDLGDTDFC-NSGNGVLSDRDNRLGETVSMEDFAFLNESVVDYDAAGSPDSSSC---KYS 91
           S LGD+DFC N GNG L      +      E+F+FL +S+ DYDA    + +     K+S
Sbjct: 55  SGLGDSDFCINGGNGSLEVPVEMISRPAH-EEFSFLFQSIYDYDADFMKNEAKLHPGKFS 113

Query: 90  DEAVLIADRIRGCNGVDFDDKTQKLLRQFR 1
           DEA+L+ + IR  NG ++ D+  K LR FR
Sbjct: 114 DEALLLCELIR-TNGTNWGDEMPKSLRPFR 142


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