BLASTX nr result

ID: Cinnamomum24_contig00033596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00033596
         (317 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26355.3| unnamed protein product [Vitis vinifera]               65   3e-08
ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi...    65   3e-08
ref|XP_012069757.1| PREDICTED: pentatricopeptide repeat-containi...    64   6e-08
ref|XP_009615054.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07
ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_007034951.1| Tetratricopeptide repeat-like superfamily pr...    58   2e-06
ref|XP_010278168.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_012484454.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN PI  ++HNC+ LKSLKSIHARLLI+ S+  S+  +NK+LRLY+ F
Sbjct: 1   MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRF 48


>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Vitis vinifera]
          Length = 642

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN PI  ++HNC+ LKSLKSIHARLLI+ S+  S+  +NK+LRLY+ F
Sbjct: 1   MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRF 48


>ref|XP_012069757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Jatropha curcas]
           gi|643733325|gb|KDP40272.1| hypothetical protein
           JCGZ_02270 [Jatropha curcas]
          Length = 651

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN P+ +LL+ C +LK LKS+HA L+I GSI FSD+ LNK+LRLY+ F
Sbjct: 1   MNHPLLNLLNKCRSLKHLKSVHAHLVISGSITFSDLTLNKLLRLYSRF 48


>ref|XP_009615054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Nicotiana tomentosiformis]
          Length = 668

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN+ +S+LL +C+  KSLKSIHA LL+ GSI  SD+ LNK +RLY+ F
Sbjct: 1   MNQTVSNLLQSCKTQKSLKSIHAHLLVCGSIALSDLALNKFIRLYSRF 48


>ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum lycopersicum]
          Length = 668

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN+ +S LL  C+ L SLKS+HA LL+ GSI  SD+ LNKI+RLY  F
Sbjct: 1   MNQAVSRLLQTCKTLHSLKSVHAHLLVCGSIASSDLVLNKIIRLYTRF 48


>ref|XP_007034951.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|590658795|ref|XP_007034952.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508713980|gb|EOY05877.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508713981|gb|EOY05878.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 683

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -1

Query: 146 NKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           +K + SLL   ++LK LKSIHARLLIDGSI  SD+ LNK LR YA F
Sbjct: 18  SKLVLSLLDRAQSLKPLKSIHARLLIDGSIASSDLVLNKFLRFYARF 64


>ref|XP_010278168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Nelumbo nucifera]
          Length = 655

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 38/46 (82%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYA 12
           MN  +S L+ +C +++S+KS+HARLLIDGS++ S++ LNK+LR Y+
Sbjct: 1   MNHGLSLLVDSCRSIRSIKSVHARLLIDGSLYSSELLLNKVLRAYS 46


>ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum tuberosum]
          Length = 668

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN+ +S LL  C+ L  LKS+HA LL+ GSI  SD+ LNKI+RLY+ F
Sbjct: 1   MNQAVSHLLQTCKTLHRLKSVHAHLLVCGSIASSDLVLNKIIRLYSRF 48


>ref|XP_012484454.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Gossypium raimondii]
           gi|763767308|gb|KJB34523.1| hypothetical protein
           B456_006G070200 [Gossypium raimondii]
          Length = 649

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = -1

Query: 149 MNKPISSLLHNCENLKSLKSIHARLLIDGSIFFSDVFLNKILRLYANF 6
           MN  +S LL+  ++LKSLK +HARLL+ GS   S + LNK+LRLYA F
Sbjct: 1   MNPSLSRLLNKAQSLKSLKFVHARLLVHGSFALSHLVLNKLLRLYARF 48


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