BLASTX nr result

ID: Cinnamomum24_contig00033405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00033405
         (300 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P84786.1|RIP_DRIMA RecName: Full=Ribosome-inactivating protei...    89   1e-15
gb|AAM89506.1|AF289118_1 type 1 ribosome-inactivating protein mu...    70   6e-10
gb|AAQ09025.1|AF289119_1 type 1 ribosome-inactivating protein mu...    60   6e-07
gb|AAM89504.1|AF289116_1 type 1 ribosome-inactivating protein mu...    59   1e-06
gb|AAM89505.1|AF289117_1 type 1 ribosome-inactivating protein mu...    58   3e-06

>sp|P84786.1|RIP_DRIMA RecName: Full=Ribosome-inactivating protein charybdin; AltName:
           Full=rRNA N-glycosidase gi|110590853|pdb|2B7U|A Chain A,
           Ribosome Inactivating Protein Type 1 From Charybdis
           Maritima Agg
          Length = 257

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 42/88 (47%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -1

Query: 294 EASRFIDISDYFASKLXXXXSVFLPTWMRT-LENDWGRFSTIVLYADAFPCYVYQPQTIN 118
           EA+RF+DI+++FA  L     V LP WM+  LE +W RFS ++L ++A PCY ++PQTI 
Sbjct: 167 EATRFVDIANHFAFNLESSEPVKLPQWMQNDLEKNWVRFSFMILKSNADPCYKFEPQTIY 226

Query: 117 GEVMKTVADLRDKLGILLRNPDTLKPPC 34
           G+++KT  +L + LGI+ ++PDT  PPC
Sbjct: 227 GKIIKTADELLNFLGIVEQHPDTRSPPC 254


>gb|AAM89506.1|AF289118_1 type 1 ribosome-inactivating protein musarmin 1 [Muscari
           armeniacum]
          Length = 295

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 40/80 (50%), Positives = 47/80 (58%)
 Frame = -1

Query: 300 LAEASRFIDISDYFASKLXXXXSVFLPTWMRTLENDWGRFSTIVLYADAFPCYVYQPQTI 121
           + EA+RFI ISD+FAS L    +   P  M  LE +W R S  VL  DA   Y  QPQTI
Sbjct: 185 ICEATRFIPISDHFASNLATDYAKLPPWMMSDLEKNWARISREVLKWDADTSYKIQPQTI 244

Query: 120 NGEVMKTVADLRDKLGILLR 61
           NG+ + TV  LR  LGIL R
Sbjct: 245 NGQTITTVEGLRPYLGILYR 264


>gb|AAQ09025.1|AF289119_1 type 1 ribosome-inactivating protein musarmin 4 [Muscari
           armeniacum]
          Length = 294

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 42/95 (44%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = -1

Query: 297 AEASRFIDISDYFASKLXXXXSVFLPTW-MRTLENDWGRFSTIVLYADAFPCYVYQPQTI 121
           +EA+RFI +SDYFAS L    +  LP W MR L+ +W   S  VL  DA P Y   P TI
Sbjct: 185 SEAARFISVSDYFASNL-ATPNAKLPAWMMRDLQKNWALISRDVLRWDARPSYNIGPFTI 243

Query: 120 NGEVMKTVADLRDKLGILLRNPDTLKPPCKMEYEQ 16
           NG  +     LR  LGIL R+  T  P     YE+
Sbjct: 244 NGNRITDFLRLRPYLGILYRS--TADPFSTSLYEE 276


>gb|AAM89504.1|AF289116_1 type 1 ribosome-inactivating protein musarmin 3 [Muscari
           armeniacum]
          Length = 298

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -1

Query: 300 LAEASRFIDISDYFASKLXXXXSVFLPTWM-RTLENDWGRFSTIVLYADAFPCYVYQPQT 124
           + EA+RFI + ++FAS L    +  LP WM   L+ +W R S  VL   A P Y  QPQT
Sbjct: 185 ICEAARFISVENHFASNLATQRAK-LPLWMMEDLQKNWARISREVLRWAADPTYRIQPQT 243

Query: 123 INGEVMKTVADLRDKLGILLR 61
           IN + + TVA LR  LG L R
Sbjct: 244 INRKRITTVAGLRPYLGTLYR 264


>gb|AAM89505.1|AF289117_1 type 1 ribosome-inactivating protein musarmin 2 [Muscari
           armeniacum]
          Length = 294

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -1

Query: 297 AEASRFIDISDYFASKLXXXXSVFLPTW-MRTLENDWGRFSTIVLYADAFPCYVYQPQTI 121
           +EA+RFI +SDYFAS L    +  LP W M  L+ +W   S  VL     P Y  Q   I
Sbjct: 185 SEATRFISVSDYFASNL-ATPNTKLPAWMMEDLQKNWAHISQEVLRWGVRPSYNIQISNI 243

Query: 120 NGEVMKTVADLRDKLGIL 67
           NG  + TVA LR  LGIL
Sbjct: 244 NGRPITTVAQLRPYLGIL 261


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