BLASTX nr result
ID: Cinnamomum24_contig00033282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00033282
(272 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008363014.1| PREDICTED: pentatricopeptide repeat-containi... 123 6e-26
ref|XP_008390133.1| PREDICTED: pentatricopeptide repeat-containi... 123 6e-26
ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prun... 123 6e-26
ref|XP_008242743.1| PREDICTED: pentatricopeptide repeat-containi... 122 1e-25
ref|XP_009371401.1| PREDICTED: pentatricopeptide repeat-containi... 121 2e-25
emb|CBI38781.3| unnamed protein product [Vitis vinifera] 116 6e-24
ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containi... 116 6e-24
emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera] 116 6e-24
ref|XP_013664241.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
ref|XP_009362951.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
emb|CDX75336.1| BnaA01g03660D [Brassica napus] 115 1e-23
ref|XP_008393567.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ... 115 1e-23
ref|XP_013735148.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
ref|XP_011629038.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
ref|XP_009124630.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
ref|NP_195043.1| pentatricopeptide repeat-containing protein [Ar... 115 1e-23
ref|XP_013699470.1| PREDICTED: pentatricopeptide repeat-containi... 115 2e-23
ref|XP_010648799.1| PREDICTED: pentatricopeptide repeat-containi... 115 2e-23
emb|CDY45030.1| BnaA08g11890D [Brassica napus] 115 2e-23
>ref|XP_008363014.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Malus domestica]
Length = 157
Score = 123 bits (308), Expect = 6e-26
Identities = 54/73 (73%), Positives = 65/73 (89%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
+L LHSEKLA+AFGLIST T++R+VKNLRVC+DCHT K +S+VY+REI++RDRNRFH
Sbjct: 85 ALSLHSEKLAIAFGLISTKPRTTIRVVKNLRVCSDCHTATKLISKVYNREIIVRDRNRFH 144
Query: 86 RFRDGSCSCSDFW 48
RFRDGSCSC DFW
Sbjct: 145 RFRDGSCSCKDFW 157
>ref|XP_008390133.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Malus domestica]
Length = 659
Score = 123 bits (308), Expect = 6e-26
Identities = 54/73 (73%), Positives = 65/73 (89%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
+L LHSEKLA+AFGLIST T++R+VKNLRVC+DCHT K +S+VY+REI++RDRNRFH
Sbjct: 587 ALSLHSEKLAIAFGLISTKPRTTIRVVKNLRVCSDCHTATKLISKVYNREIIVRDRNRFH 646
Query: 86 RFRDGSCSCSDFW 48
RFRDGSCSC DFW
Sbjct: 647 RFRDGSCSCKDFW 659
>ref|XP_007203470.1| hypothetical protein PRUPE_ppa024598mg [Prunus persica]
gi|462399001|gb|EMJ04669.1| hypothetical protein
PRUPE_ppa024598mg [Prunus persica]
Length = 722
Score = 123 bits (308), Expect = 6e-26
Identities = 53/73 (72%), Positives = 66/73 (90%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
+L LHSEKLA+AFGLIST+ T++R+VKNLRVC+DCHT K +S+VY+REI++RDRNRFH
Sbjct: 650 ALSLHSEKLAIAFGLISTNPGTTIRVVKNLRVCSDCHTATKIISKVYNREIIVRDRNRFH 709
Query: 86 RFRDGSCSCSDFW 48
RF+DGSCSC DFW
Sbjct: 710 RFQDGSCSCKDFW 722
>ref|XP_008242743.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Prunus mume]
Length = 722
Score = 122 bits (306), Expect = 1e-25
Identities = 52/73 (71%), Positives = 66/73 (90%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
+L +HSEKLA+AFGLIST+ T++R+VKNLRVC+DCHT K +S+VY+REI++RDRNRFH
Sbjct: 650 ALCVHSEKLAIAFGLISTNPGTTIRVVKNLRVCSDCHTATKIISKVYNREIIVRDRNRFH 709
Query: 86 RFRDGSCSCSDFW 48
RF+DGSCSC DFW
Sbjct: 710 RFQDGSCSCKDFW 722
>ref|XP_009371401.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Pyrus x bretschneideri]
Length = 718
Score = 121 bits (303), Expect = 2e-25
Identities = 53/73 (72%), Positives = 65/73 (89%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
+L LHSEKLA+AFGLIST T++R+VKNLRVC+DCHT K +S+VY+REI++RDR+RFH
Sbjct: 646 ALSLHSEKLAIAFGLISTKPRTTIRVVKNLRVCSDCHTATKLISKVYNREIIVRDRSRFH 705
Query: 86 RFRDGSCSCSDFW 48
RFRDGSCSC DFW
Sbjct: 706 RFRDGSCSCKDFW 718
>emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 116 bits (291), Expect = 6e-24
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
SL LHSEKLA+A GLIST S + +RIVKNLRVCNDCH+ +K S+VY+REIV RDR+RFH
Sbjct: 517 SLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFH 576
Query: 86 RFRDGSCSCSDFW 48
F++GSCSC DFW
Sbjct: 577 HFKEGSCSCMDFW 589
>ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 116 bits (291), Expect = 6e-24
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
SL LHSEKLA+A GLIST S + +RIVKNLRVCNDCH+ +K S+VY+REIV RDR+RFH
Sbjct: 615 SLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFH 674
Query: 86 RFRDGSCSCSDFW 48
F++GSCSC DFW
Sbjct: 675 HFKEGSCSCMDFW 687
>emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 116 bits (291), Expect = 6e-24
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
SL LHSEKLA+A GLIST S + +RIVKNLRVCNDCH+ +K S+VY+REIV RDR+RFH
Sbjct: 413 SLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFH 472
Query: 86 RFRDGSCSCSDFW 48
F++GSCSC DFW
Sbjct: 473 HFKEGSCSCMDFW 485
>ref|XP_013664241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Brassica napus]
Length = 988
Score = 115 bits (289), Expect = 1e-23
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = -1
Query: 266 SLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRFH 87
+L HSEKLA+AFGL+ST +ST +R++KNLRVC DCH MK +++VY REI+LRD NRFH
Sbjct: 916 ALYYHSEKLAVAFGLMSTPASTPIRVIKNLRVCGDCHNAMKYIAKVYDREIILRDANRFH 975
Query: 86 RFRDGSCSCSDFW 48
RF+DG CSC DFW
Sbjct: 976 RFKDGKCSCGDFW 988
>ref|XP_009362951.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Pyrus x bretschneideri]
Length = 1011
Score = 115 bits (289), Expect = 1e-23
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
+SL HSEKLA+A+GLIST S ++R++KNLRVC DCH +K +S+VY REIVLRD NRF
Sbjct: 938 RSLYYHSEKLAIAYGLISTPPSAAIRVIKNLRVCGDCHNAVKYISKVYQREIVLRDANRF 997
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG+CSC D+W
Sbjct: 998 HRFKDGTCSCGDYW 1011
>emb|CDX75336.1| BnaA01g03660D [Brassica napus]
Length = 988
Score = 115 bits (289), Expect = 1e-23
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST ST +R++KNLRVC DCH MK +S+VY REIVLRD NRF
Sbjct: 915 RALHHHSEKLAVAFGLMSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRF 974
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC DFW
Sbjct: 975 HRFKDGKCSCGDFW 988
>ref|XP_008393567.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Malus domestica]
Length = 1011
Score = 115 bits (289), Expect = 1e-23
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
+SL HSEKLA+A+GLIST S ++R++KNLRVC DCH +K +S+VY REIVLRD NRF
Sbjct: 938 RSLYYHSEKLAIAYGLISTPPSAAIRVIKNLRVCGDCHNAVKYISKVYQREIVLRDANRF 997
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG+CSC D+W
Sbjct: 998 HRFKDGTCSCGDYW 1011
>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313032|gb|EFH43455.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 997
Score = 115 bits (289), Expect = 1e-23
Identities = 50/74 (67%), Positives = 61/74 (82%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST ST +R++KNLRVC DCH MK +S+VY REIVLRD NRF
Sbjct: 924 RALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRF 983
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC D+W
Sbjct: 984 HRFKDGICSCGDYW 997
>ref|XP_013735148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Brassica napus]
Length = 988
Score = 115 bits (288), Expect = 1e-23
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST ST +R++KNLRVC DCH MK +S+VY REIVLRD NRF
Sbjct: 915 RALHHHSEKLAVAFGLMSTPPSTLIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRF 974
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC DFW
Sbjct: 975 HRFKDGKCSCGDFW 988
>ref|XP_011629038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Amborella trichopoda]
Length = 589
Score = 115 bits (288), Expect = 1e-23
Identities = 51/75 (68%), Positives = 64/75 (85%)
Frame = -1
Query: 272 RKSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNR 93
++ LL HSEKLA+AFGLIS +SS +RI KNLR+C DCH+M+K VS VY RE+++RDR+R
Sbjct: 515 KEVLLHHSEKLAVAFGLISMNSSEPIRISKNLRICGDCHSMLKMVSMVYSRELIVRDRSR 574
Query: 92 FHRFRDGSCSCSDFW 48
FHRFR+GSCSC DFW
Sbjct: 575 FHRFREGSCSCGDFW 589
>ref|XP_009124630.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Brassica rapa]
Length = 988
Score = 115 bits (288), Expect = 1e-23
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST ST +R++KNLRVC DCH MK +S+VY REIVLRD NRF
Sbjct: 915 RALNHHSEKLAVAFGLMSTPPSTLIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRF 974
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC DFW
Sbjct: 975 HRFKDGKCSCGDFW 988
>ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g33170 gi|4455331|emb|CAB36791.1| putative protein
[Arabidopsis thaliana] gi|7270265|emb|CAB80034.1|
putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 115 bits (288), Expect = 1e-23
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST ST +R++KNLRVC DCH MK +++VY+REIVLRD NRF
Sbjct: 917 RALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRF 976
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC D+W
Sbjct: 977 HRFKDGICSCGDYW 990
>ref|XP_013699470.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Brassica napus]
Length = 983
Score = 115 bits (287), Expect = 2e-23
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST +T +R++KNLRVC DCH MK +++VY REIVLRD NRF
Sbjct: 910 RALYYHSEKLAVAFGLMSTPPATPIRVIKNLRVCGDCHNAMKYIAKVYGREIVLRDANRF 969
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC+DFW
Sbjct: 970 HRFKDGKCSCNDFW 983
>ref|XP_010648799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1597
Score = 115 bits (287), Expect = 2e-23
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
+SL HSEKLA+A+GLIST +ST++R++KNLRVC DCH +K +S+V+ REIVLRD NRF
Sbjct: 1524 RSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRF 1583
Query: 89 HRFRDGSCSCSDFW 48
H FRDG CSC D+W
Sbjct: 1584 HHFRDGVCSCGDYW 1597
>emb|CDY45030.1| BnaA08g11890D [Brassica napus]
Length = 900
Score = 115 bits (287), Expect = 2e-23
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = -1
Query: 269 KSLLLHSEKLALAFGLISTHSSTSVRIVKNLRVCNDCHTMMKDVSRVYHREIVLRDRNRF 90
++L HSEKLA+AFGL+ST +T +R++KNLRVC DCH MK +++VY REIVLRD NRF
Sbjct: 827 RALYYHSEKLAVAFGLMSTPPATPIRVIKNLRVCGDCHNAMKYIAKVYGREIVLRDANRF 886
Query: 89 HRFRDGSCSCSDFW 48
HRF+DG CSC+DFW
Sbjct: 887 HRFKDGKCSCNDFW 900