BLASTX nr result

ID: Cinnamomum24_contig00033165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00033165
         (336 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006380112.1| hypothetical protein POPTR_0008s22020g [Popu...    65   2e-08
ref|XP_006380091.1| hypothetical protein POPTR_0008s21820g, part...    65   3e-08
ref|XP_002310636.2| hypothetical protein POPTR_0007s07310g [Popu...    38   8e-06

>ref|XP_006380112.1| hypothetical protein POPTR_0008s22020g [Populus trichocarpa]
           gi|550333633|gb|ERP57909.1| hypothetical protein
           POPTR_0008s22020g [Populus trichocarpa]
          Length = 230

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = -2

Query: 197 IHQLASSATMPHYLCAHWAKK*VPIMQIQIGEVPT 93
           I  LASSATMPHYLCAHWAKK  PIMQIQIGEVPT
Sbjct: 58  IISLASSATMPHYLCAHWAKKYGPIMQIQIGEVPT 92



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 36/84 (42%), Positives = 43/84 (51%)
 Frame = -3

Query: 334 MQQEIPXXXXXXXXXXXXXXXGKKSKGHDSTCTPPPGPWKLPFIGKSIS*LALQQCPIIS 155
           MQQEIP               GKKSKGHDST TPPPGPWKLP IG      +    PIIS
Sbjct: 1   MQQEIPLVLGFLLLVFAVLRLGKKSKGHDSTRTPPPGPWKLPLIGNIHQLASSATMPIIS 60

Query: 154 VRIGPRNKYQSCKFRLEKFLPIIR 83
           +       +  C    +K+ PI++
Sbjct: 61  LASSATMPHYLCAHWAKKYGPIMQ 84


>ref|XP_006380091.1| hypothetical protein POPTR_0008s21820g, partial [Populus
           trichocarpa] gi|550333612|gb|ERP57888.1| hypothetical
           protein POPTR_0008s21820g, partial [Populus trichocarpa]
          Length = 170

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = -2

Query: 188 LASSATMPHYLCAHWAKK*VPIMQIQIGEVPT 93
           LASSATMPHYLCAHWAKK  PIMQIQIGEVPT
Sbjct: 1   LASSATMPHYLCAHWAKKYGPIMQIQIGEVPT 32


>ref|XP_002310636.2| hypothetical protein POPTR_0007s07310g [Populus trichocarpa]
           gi|550334325|gb|EEE91086.2| hypothetical protein
           POPTR_0007s07310g [Populus trichocarpa]
          Length = 509

 Score = 38.1 bits (87), Expect(2) = 8e-06
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -3

Query: 268 KKSKGHDS-TCTPPPGPWKLPFIG 200
           KKS+G++S T  PPPGPWKLP IG
Sbjct: 27  KKSQGNNSSTPPPPPGPWKLPLIG 50



 Score = 38.1 bits (87), Expect(2) = 8e-06
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = -2

Query: 227 GTMEITLHWKIHQLASSATMPHYLCAHWAKK*VPIMQIQIGEVPT 93
           G  ++ L   +HQL  S  +PH +    A K  P+MQ+QIGEVPT
Sbjct: 42  GPWKLPLIGNLHQLLGS--LPHQVLRDMANKYGPVMQLQIGEVPT 84


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