BLASTX nr result
ID: Cinnamomum24_contig00032903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00032903
(301 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica... 116 6e-24
gb|AKR81113.1| hypothetical chloroplast RF21 (plastid) [Pentaste... 116 8e-24
gb|AKR80760.1| hypothetical chloroplast RF21 (plastid) [Stemona ... 116 8e-24
gb|AKR80675.1| hypothetical chloroplast RF21 (plastid) [Croomia ... 116 8e-24
ref|YP_009161597.1| photosystem I assembly protein Ycf2 (chlorop... 115 2e-23
gb|AKF01275.1| hypothetical chloroplast RF21 (chloroplast) [Burr... 115 2e-23
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) (... 115 2e-23
gb|AEK48536.1| photosystem I assembly protein Ycf2 (chloroplast)... 115 2e-23
ref|YP_005097917.1| photosystem I assembly protein Ycf2 (chlorop... 115 2e-23
ref|YP_009172102.1| hypothetical chloroplast RF21 (chloroplast) ... 114 2e-23
ref|YP_009172022.1| hypothetical chloroplast RF21 (chloroplast) ... 114 2e-23
ref|YP_009169396.1| hypothetical chloroplast RF2 (chloroplast) [... 114 2e-23
ref|YP_009170221.1| hypothetical chloroplast RF21 (plastid) [Col... 114 2e-23
gb|AKU71016.1| hypothetical chloroplast RF2 (chloroplast) [Cinna... 114 2e-23
ref|YP_009163061.1| hypothetical chloroplast RF2 (chloroplast) [... 114 2e-23
gb|AKR81266.1| hypothetical chloroplast RF21 (plastid) [Cyclanth... 114 2e-23
gb|AKR81134.1| hypothetical chloroplast RF21 (plastid) [Freycine... 114 2e-23
gb|AKR81020.1| hypothetical chloroplast RF21 (plastid) [Stichone... 114 2e-23
gb|AKR80622.1| hypothetical chloroplast RF21, partial (plastid) ... 114 2e-23
gb|AKF02179.1| hypothetical chloroplast RF21 (chloroplast) [Oeno... 114 2e-23
>ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica]
gi|114330032|ref|YP_740713.1| hypothetical chloroplast
RF2 [Nandina domestica]
gi|122165906|sp|Q09FP8.1|YCF2_NANDO RecName: Full=Protein
Ycf2 gi|114054515|gb|ABI49908.1| hypothetical chloroplast
RF2 (chloroplast) [Nandina domestica]
gi|114054534|gb|ABI49927.1| hypothetical chloroplast RF2
(chloroplast) [Nandina domestica]
Length = 2299
Score = 116 bits (291), Expect = 6e-24
Identities = 61/73 (83%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1618 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLTTNSYVPFITVFPNKFLDDKPK 1677
Query: 263 GYLIDDINIDDSD 301
GYLIDDINIDDSD
Sbjct: 1678 GYLIDDINIDDSD 1690
>gb|AKR81113.1| hypothetical chloroplast RF21 (plastid) [Pentastemona sumatrana]
Length = 2280
Score = 116 bits (290), Expect = 8e-24
Identities = 61/73 (83%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY VT SYVPFITVF + L
Sbjct: 1603 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLVTNSYVPFITVFPNKFLDDKPK 1662
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1663 GYLIDDIDIDDSD 1675
>gb|AKR80760.1| hypothetical chloroplast RF21 (plastid) [Stemona tuberosa]
Length = 2301
Score = 116 bits (290), Expect = 8e-24
Identities = 61/73 (83%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY VT SYVPFITVF + L
Sbjct: 1611 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLVTNSYVPFITVFPNKFLDDKPK 1670
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1671 GYLIDDIDIDDSD 1683
>gb|AKR80675.1| hypothetical chloroplast RF21 (plastid) [Croomia japonica]
Length = 2300
Score = 116 bits (290), Expect = 8e-24
Identities = 61/73 (83%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY VT SYVPFITVF + L
Sbjct: 1617 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLVTNSYVPFITVFPNKFLDDKPK 1676
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1677 GYLIDDIDIDDSD 1689
>ref|YP_009161597.1| photosystem I assembly protein Ycf2 (chloroplast) [Pinellia ternata]
gi|910355640|ref|YP_009161616.1| photosystem I assembly
protein Ycf2 (chloroplast) [Pinellia ternata]
gi|827505692|gb|AKJ83679.1| photosystem I assembly
protein Ycf2 (chloroplast) [Pinellia ternata]
gi|827505693|gb|AKJ83680.1| photosystem I assembly
protein Ycf2 (chloroplast) [Pinellia ternata]
Length = 2307
Score = 115 bits (287), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1622 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKSK 1681
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1682 GYLIDDIDIDDSD 1694
>gb|AKF01275.1| hypothetical chloroplast RF21 (chloroplast) [Burretiokentia
grandiflora] gi|816379259|gb|AKF01894.1| hypothetical
chloroplast RF21 (chloroplast) [Kentiopsis piersoniorum]
Length = 2294
Score = 115 bits (287), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1609 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLTTNSYVPFITVFPNKFLDDKSK 1668
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1669 GYLIDDIDIDDSD 1681
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) (chloroplast)
[Catharanthus roseus] gi|511348399|ref|YP_008081328.1|
hypothetical chloroplast RF2 (chloroplast) (chloroplast)
[Catharanthus roseus] gi|474452120|gb|AGI51188.1|
hypothetical chloroplast RF2 (chloroplast) [Catharanthus
roseus] gi|474452139|gb|AGI51207.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
Length = 2273
Score = 115 bits (287), Expect = 2e-23
Identities = 66/102 (64%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Frame = +2
Query: 8 ICVAHLECATV*E-FCSTGGFTTDPNLRPHFPSHGKPFSLRLALSPSRGILVIGSIGTGR 184
I +AH + T + C T F HFPSHGKPFSLRLALSPSRGILVIGSIG+GR
Sbjct: 1582 IFLAHYQTITYSQTLCGTNSF--------HFPSHGKPFSLRLALSPSRGILVIGSIGSGR 1633
Query: 185 SYLVKY*VTKSYVPFITVFSKQVL---R*GYLIDDINIDDSD 301
SYLVKY T SYVPFITVF + L G+LIDDINIDDSD
Sbjct: 1634 SYLVKYLATNSYVPFITVFLNKFLDNKPNGFLIDDINIDDSD 1675
>gb|AEK48536.1| photosystem I assembly protein Ycf2 (chloroplast) [Colocasia
esculenta] gi|340536789|gb|AEK48555.1| photosystem I
assembly protein Ycf2 (chloroplast) [Colocasia esculenta]
Length = 2308
Score = 115 bits (287), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1623 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKSK 1682
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1683 GYLIDDIDIDDSD 1695
>ref|YP_005097917.1| photosystem I assembly protein Ycf2 (chloroplast) [Colocasia
esculenta] gi|377819441|ref|YP_005097936.1| photosystem I
assembly protein Ycf2 (chloroplast) [Colocasia esculenta]
gi|340536683|gb|AEK48450.1| photosystem I assembly
protein Ycf2 (chloroplast) [Colocasia esculenta]
gi|340536702|gb|AEK48469.1| photosystem I assembly
protein Ycf2 (chloroplast) [Colocasia esculenta]
Length = 2308
Score = 115 bits (287), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1623 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKSK 1682
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1683 GYLIDDIDIDDSD 1695
>ref|YP_009172102.1| hypothetical chloroplast RF21 (chloroplast) [Machilus balansae]
gi|929982446|gb|ALF35807.1| hypothetical chloroplast RF21
(chloroplast) [Machilus balansae]
Length = 2285
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1612 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1671
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1672 GYLIDDIDIDDSD 1684
>ref|YP_009172022.1| hypothetical chloroplast RF21 (chloroplast) [Machilus yunnanensis]
gi|929982365|gb|ALF35727.1| hypothetical chloroplast RF21
(chloroplast) [Machilus yunnanensis]
Length = 2285
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1612 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1671
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1672 GYLIDDIDIDDSD 1684
>ref|YP_009169396.1| hypothetical chloroplast RF2 (chloroplast) [Clematis terniflora]
gi|937546418|ref|YP_009169412.1| hypothetical chloroplast
RF2 (chloroplast) [Clematis terniflora]
gi|687814895|gb|AIQ81137.1| hypothetical chloroplast RF2
(chloroplast) [Clematis terniflora]
gi|687814911|gb|AIQ81153.1| hypothetical chloroplast RF2
(chloroplast) [Clematis terniflora]
Length = 2277
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1594 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1653
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1654 GYLIDDIDIDDSD 1666
>ref|YP_009170221.1| hypothetical chloroplast RF21 (plastid) [Colpothrinax cookii]
gi|937547270|ref|YP_009170238.1| hypothetical chloroplast
RF21 (plastid) [Colpothrinax cookii]
gi|927679634|gb|ALE29011.1| hypothetical chloroplast RF21
(plastid) [Colpothrinax cookii]
gi|927679652|gb|ALE29029.1| hypothetical chloroplast RF21
(plastid) [Colpothrinax cookii]
Length = 2301
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1616 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLTTNSYVPFITVFPNKFLDDKPK 1675
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1676 GYLIDDIDIDDSD 1688
>gb|AKU71016.1| hypothetical chloroplast RF2 (chloroplast) [Cinnamomum micranthum f.
kanehirae]
Length = 2320
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1645 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1704
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1705 GYLIDDIDIDDSD 1717
>ref|YP_009163061.1| hypothetical chloroplast RF2 (chloroplast) [Sinopodophyllum
hexandrum] gi|918020556|ref|YP_009163080.1| hypothetical
chloroplast RF2 (chloroplast) [Sinopodophyllum hexandrum]
gi|909719772|gb|AKT94040.1| hypothetical chloroplast RF2
(chloroplast) [Sinopodophyllum hexandrum]
gi|909719773|gb|AKT94041.1| hypothetical chloroplast RF2
(chloroplast) [Sinopodophyllum hexandrum]
Length = 2311
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY VT SYVPFITVF + L
Sbjct: 1626 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLVTNSYVPFITVFPNKFLDDKPQ 1685
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+ DDSD
Sbjct: 1686 GYLIDDIDFDDSD 1698
>gb|AKR81266.1| hypothetical chloroplast RF21 (plastid) [Cyclanthus bipartitus]
Length = 2306
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1621 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1680
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1681 GYLIDDIDIDDSD 1693
>gb|AKR81134.1| hypothetical chloroplast RF21 (plastid) [Freycinetia banksii]
Length = 2300
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1619 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1678
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1679 GYLIDDIDIDDSD 1691
>gb|AKR81020.1| hypothetical chloroplast RF21 (plastid) [Stichoneuron caudatum]
Length = 2301
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY VT SYVPFITVF + L
Sbjct: 1610 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLVTNSYVPFITVFPNKFLDDKPK 1669
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+ID+SD
Sbjct: 1670 GYLIDDIDIDESD 1682
>gb|AKR80622.1| hypothetical chloroplast RF21, partial (plastid) [Sararanga sinuosa]
Length = 2297
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1619 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFPNKFLDDKPK 1678
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1679 GYLIDDIDIDDSD 1691
>gb|AKF02179.1| hypothetical chloroplast RF21 (chloroplast) [Oenocarpus minor]
Length = 2292
Score = 114 bits (286), Expect = 2e-23
Identities = 60/73 (82%), Positives = 62/73 (84%), Gaps = 3/73 (4%)
Frame = +2
Query: 92 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY*VTKSYVPFITVFSKQVL---R* 262
HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKY T SYVPFITVF + L
Sbjct: 1607 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLTTNSYVPFITVFPNKFLDDKPK 1666
Query: 263 GYLIDDINIDDSD 301
GYLIDDI+IDDSD
Sbjct: 1667 GYLIDDIDIDDSD 1679