BLASTX nr result
ID: Cinnamomum24_contig00032897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00032897
(302 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIU48198.1| MSH1, partial [Cinnamomum camphora] 185 1e-44
gb|AIU48175.1| MSH1, partial [Chimonanthus praecox] 117 3e-24
gb|AIU48176.1| MSH1, partial [Liriodendron tulipifera] 115 2e-23
gb|AIU48157.1| MSH1, partial [Magnolia denudata] 112 1e-22
gb|AIU48199.1| MSH1, partial [Platanus x acerifolia] 100 6e-19
gb|AIU48171.1| MSH1, partial [Buxus sinica] 96 1e-17
gb|AKU77187.1| DNA mismatch repair protein, partial [Lamprocapno... 92 2e-16
gb|AKU77223.1| DNA mismatch repair protein, partial [Distylium b... 89 2e-15
gb|AKU77215.1| DNA mismatch repair protein, partial [Actinidia a... 87 4e-15
ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1,... 86 8e-15
ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1,... 86 8e-15
ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1,... 86 8e-15
ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1,... 83 9e-14
gb|AKU77193.1| DNA mismatch repair protein, partial [Pachysandra... 81 3e-13
gb|AKU77220.1| DNA mismatch repair protein, partial [Cornus wils... 80 6e-13
gb|AKU77201.1| DNA mismatch repair protein, partial [Rhododendro... 80 6e-13
gb|AKU77178.1| DNA mismatch repair protein, partial [Schisandra ... 80 6e-13
ref|XP_010650167.1| PREDICTED: DNA mismatch repair protein MSH1,... 79 1e-12
ref|XP_010650166.1| PREDICTED: DNA mismatch repair protein MSH1,... 79 1e-12
gb|AIU48162.1| MSH1, partial [Acorus calamus] 79 1e-12
>gb|AIU48198.1| MSH1, partial [Cinnamomum camphora]
Length = 577
Score = 185 bits (469), Expect = 1e-44
Identities = 95/100 (95%), Positives = 97/100 (97%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELYFSINGSGSCSQIDDAKI+H SPGSDVNGF EASDSLRRISNGFSSFRTEISNPKEI
Sbjct: 386 EELYFSINGSGSCSQIDDAKIEHLSPGSDVNGFYEASDSLRRISNGFSSFRTEISNPKEI 445
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
LLKEVES ITIICQKKLIELYKQKNLSELAEVSCVAVGAR
Sbjct: 446 LLKEVESNITIICQKKLIELYKQKNLSELAEVSCVAVGAR 485
>gb|AIU48175.1| MSH1, partial [Chimonanthus praecox]
Length = 761
Score = 117 bits (293), Expect = 3e-24
Identities = 61/100 (61%), Positives = 75/100 (75%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
++LY SIN SG+ S DDA + H +P S+ +GFDEA+ S R I N F + EI +P E
Sbjct: 570 EDLYSSINSSGTFSGRDDANVVHLNPNSEADGFDEATYSSRSIGNRFIPSQAEILSPGET 629
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L+KEVES ITIICQKKLIELYK K+LSELAEVSCV +G+R
Sbjct: 630 LIKEVESAITIICQKKLIELYKCKSLSELAEVSCVKIGSR 669
>gb|AIU48176.1| MSH1, partial [Liriodendron tulipifera]
Length = 614
Score = 115 bits (287), Expect = 2e-23
Identities = 63/100 (63%), Positives = 80/100 (80%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY SING +CS+ +D KI + SP S V+GFDEA+DSLRR SNG S+ ++ NP EI
Sbjct: 443 EELYHSINGR-ACSE-NDMKIGNLSPDSGVDGFDEANDSLRRTSNG-STHASDTLNPSEI 499
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L KEVE+ + I+CQKKLIELYK+K+LSELAEV+CV VGA+
Sbjct: 500 LQKEVENAVIIVCQKKLIELYKKKSLSELAEVACVMVGAK 539
>gb|AIU48157.1| MSH1, partial [Magnolia denudata]
Length = 729
Score = 112 bits (279), Expect = 1e-22
Identities = 61/100 (61%), Positives = 78/100 (78%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY SING +CS+ +D KI + SP VNGFDEA DSLRR SNGF+ ++ NP EI
Sbjct: 558 EELYHSINGR-ACSE-NDMKIGNLSPPGGVNGFDEAGDSLRRTSNGFTHV-SDTLNPIEI 614
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L KEVE+ + I+CQ+KLI+LYK+++LSELAEV+CV VGAR
Sbjct: 615 LQKEVENAVIIVCQRKLIDLYKKRSLSELAEVTCVMVGAR 654
>gb|AIU48199.1| MSH1, partial [Platanus x acerifolia]
Length = 1029
Score = 100 bits (248), Expect = 6e-19
Identities = 50/100 (50%), Positives = 68/100 (68%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY ++NG C + K++ S GSDVN DE+ + L RI R +I NP EI
Sbjct: 838 EELYLAVNGKDVCPGKNYVKVEQLSYGSDVNNSDESCNQLSRIGIRTDHCREKILNPVEI 897
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L+K+V S IT+ICQK L ELYKQ+NLSE+A+++CVA+ AR
Sbjct: 898 LMKKVASAITVICQKNLTELYKQRNLSEVADITCVAIAAR 937
>gb|AIU48171.1| MSH1, partial [Buxus sinica]
Length = 854
Score = 95.5 bits (236), Expect = 1e-17
Identities = 50/100 (50%), Positives = 64/100 (64%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY S NG +D K+ P SD+ +E D L RI G FR+E NP EI
Sbjct: 663 EELYLSENGKNVYLGGNDVKLVPNFPSSDIKDSNELYDRLNRIRKGAIHFRSENLNPMEI 722
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
LLKEVE+ ITIICQ+K IELYKQK++ E+ EV+CV + A+
Sbjct: 723 LLKEVENAITIICQRKYIELYKQKSIPEIREVTCVEIAAK 762
>gb|AKU77187.1| DNA mismatch repair protein, partial [Lamprocapnos spectabilis]
Length = 616
Score = 91.7 bits (226), Expect = 2e-16
Identities = 49/100 (49%), Positives = 67/100 (67%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
Q+LY S+N + ID+A+++++ +D+ DE +N + R E NP EI
Sbjct: 443 QQLYHSLNVKDAYLGIDNAELENRCSNADLEFLDEVEAPSG--TNPIQTPRIETQNPMEI 500
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
LLKEV + +TIICQKKLIELYKQ+NLSELAEVSC+ + AR
Sbjct: 501 LLKEVTTSVTIICQKKLIELYKQRNLSELAEVSCITIAAR 540
>gb|AKU77223.1| DNA mismatch repair protein, partial [Distylium buxifolium]
Length = 609
Score = 88.6 bits (218), Expect = 2e-15
Identities = 50/100 (50%), Positives = 63/100 (63%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
QELY S S +D ++ + +NG +EA + RI G +TE +N EI
Sbjct: 443 QELYLSAYTKDIFSGRNDPTLEQFCSDTILNGSEEAYHQISRIRAGTVPSKTESTNRLEI 502
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L KEVES +TIICQKKLIELYKQKN SEL EV+CV++ AR
Sbjct: 503 LQKEVESAVTIICQKKLIELYKQKNTSELGEVNCVSIAAR 542
>gb|AKU77215.1| DNA mismatch repair protein, partial [Actinidia arguta]
Length = 617
Score = 87.4 bits (215), Expect = 4e-15
Identities = 47/100 (47%), Positives = 66/100 (66%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELYFS+ + + +D K++ + +VNG +E+ D IS + E +N EI
Sbjct: 443 EELYFSVYKKDALMERNDTKLEVFTSDINVNGSNESCDPFSSISKRKFFPKVESTNRMEI 502
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L KEVES+ITI+CQKKLIELY ++N SEL EV+CVA+ AR
Sbjct: 503 LQKEVESVITILCQKKLIELYGKENTSELVEVNCVAIAAR 542
>ref|XP_010264855.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X3
[Nelumbo nucifera]
Length = 1062
Score = 86.3 bits (212), Expect = 8e-15
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 QELYFSINGSGSCSQ-IDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKE 124
+ELY S+N S DAK++H S SD E + L R+ G R + N E
Sbjct: 866 KELYLSLNEKEDASSGKSDAKVEHLSSDSD-----EVEEQLHRVKIGAIGMRMKALNSVE 920
Query: 123 ILLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
IL KE+ S +TIICQKKLIELYKQ+N+SEL EV+CV + +R
Sbjct: 921 ILRKEIASAVTIICQKKLIELYKQRNISELTEVNCVIISSR 961
>ref|XP_010264854.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Nelumbo nucifera]
Length = 1139
Score = 86.3 bits (212), Expect = 8e-15
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 QELYFSINGSGSCSQ-IDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKE 124
+ELY S+N S DAK++H S SD E + L R+ G R + N E
Sbjct: 943 KELYLSLNEKEDASSGKSDAKVEHLSSDSD-----EVEEQLHRVKIGAIGMRMKALNSVE 997
Query: 123 ILLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
IL KE+ S +TIICQKKLIELYKQ+N+SEL EV+CV + +R
Sbjct: 998 ILRKEIASAVTIICQKKLIELYKQRNISELTEVNCVIISSR 1038
>ref|XP_010264853.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Nelumbo nucifera]
Length = 1142
Score = 86.3 bits (212), Expect = 8e-15
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 QELYFSINGSGSCSQ-IDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKE 124
+ELY S+N S DAK++H S SD E + L R+ G R + N E
Sbjct: 946 KELYLSLNEKEDASSGKSDAKVEHLSSDSD-----EVEEQLHRVKIGAIGMRMKALNSVE 1000
Query: 123 ILLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
IL KE+ S +TIICQKKLIELYKQ+N+SEL EV+CV + +R
Sbjct: 1001 ILRKEIASAVTIICQKKLIELYKQRNISELTEVNCVIISSR 1041
>ref|XP_010918844.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Elaeis
guineensis]
Length = 1134
Score = 82.8 bits (203), Expect = 9e-14
Identities = 49/100 (49%), Positives = 62/100 (62%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY S+N + S + K +H + S+ G E DS R + S E+S
Sbjct: 938 EELYLSMNVTDSRIAPNSTKAEHFNAKSNARGLGEICDSSRTSLDFLPSGNLELSQ---- 993
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
KEVES +TIICQKKLIELYK+K++SELAEV CVAVGAR
Sbjct: 994 --KEVESAVTIICQKKLIELYKKKSISELAEVMCVAVGAR 1031
>gb|AKU77193.1| DNA mismatch repair protein, partial [Pachysandra terminalis]
Length = 610
Score = 81.3 bits (199), Expect = 3e-13
Identities = 44/100 (44%), Positives = 58/100 (58%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY NG +D KI+H P D+ D+ D L I G + K
Sbjct: 440 EELYLLENGKNVYLGRNDVKIEHNFPDDDIKDSDDVYDQLSTIRKGAIPYTIR----KGA 495
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
+LKEVES ITIICQ+K IELYKQK++SE+ EV+CV + A+
Sbjct: 496 ILKEVESAITIICQRKYIELYKQKSISEIREVTCVEIAAK 535
>gb|AKU77220.1| DNA mismatch repair protein, partial [Cornus wilsoniana]
Length = 618
Score = 80.1 bits (196), Expect = 6e-13
Identities = 43/100 (43%), Positives = 61/100 (61%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELYFS+ + S +D ++ + VN +EASD L I N + + +N E+
Sbjct: 443 EELYFSVYAKDAISGRNDKNLEMFPSDTSVNSSNEASDQLSVIRNRAIRSKMDSANRMEV 502
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L KEVE +TI+CQ+KL ELYK K SELAE++CV + AR
Sbjct: 503 LWKEVEIAVTIMCQEKLYELYKIKGTSELAEINCVKISAR 542
>gb|AKU77201.1| DNA mismatch repair protein, partial [Rhododendron x pulchrum]
Length = 617
Score = 80.1 bits (196), Expect = 6e-13
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTE--ISNPK 127
+ELY S+ S+ +AK++ + ++VNG +E+S N S F E + P
Sbjct: 443 EELYSSVYTKDMLSERSEAKLERFTLNTNVNGSNESSHRFH--GNSKSEFYAEGKSATPM 500
Query: 126 EILLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
EIL KEVES +TI+ QKKLIELY +KNLSE EV CVA+ AR
Sbjct: 501 EILQKEVESAVTIVVQKKLIELYNKKNLSEFPEVKCVAIAAR 542
>gb|AKU77178.1| DNA mismatch repair protein, partial [Schisandra propinqua]
Length = 617
Score = 80.1 bits (196), Expect = 6e-13
Identities = 44/100 (44%), Positives = 61/100 (61%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+E+Y S++ D + + FD A D RI+ G SF +E+ NP E
Sbjct: 443 EEIYHSMSEKNHVLLETDRTVSPLGSYAGTVSFDNAGDWPGRINIGPLSFGSEMPNPMEK 502
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
L ++VE+ +T+ICQKKLIELYKQK+LS LAEV+CV +G R
Sbjct: 503 LQQDVENAVTVICQKKLIELYKQKSLSVLAEVTCVPIGPR 542
>ref|XP_010650167.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform
X3 [Vitis vinifera]
Length = 899
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY SI+ S ++ ++ H + VN E + L RI+ G + E +N E+
Sbjct: 697 EELYLSIHSKDLLSGRNETELGHFCLDTTVNTSGEVYNQLSRITGGTICPKIESTNEMEV 756
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAV 10
L K+VES +TI+CQKKL ELYKQKN S+L E++CVA+
Sbjct: 757 LHKKVESAVTIVCQKKLKELYKQKNTSKLPEINCVAI 793
>ref|XP_010650166.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Vitis vinifera]
Length = 1114
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY SI+ S ++ ++ H + VN E + L RI+ G + E +N E+
Sbjct: 912 EELYLSIHSKDLLSGRNETELGHFCLDTTVNTSGEVYNQLSRITGGTICPKIESTNEMEV 971
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAV 10
L K+VES +TI+CQKKL ELYKQKN S+L E++CVA+
Sbjct: 972 LHKKVESAVTIVCQKKLKELYKQKNTSKLPEINCVAI 1008
>gb|AIU48162.1| MSH1, partial [Acorus calamus]
Length = 617
Score = 79.3 bits (194), Expect = 1e-12
Identities = 41/100 (41%), Positives = 58/100 (58%)
Frame = -3
Query: 300 QELYFSINGSGSCSQIDDAKIKHQSPGSDVNGFDEASDSLRRISNGFSSFRTEISNPKEI 121
+ELY S+N G+C + A +KH D DS R+S G T+ P E
Sbjct: 443 EELYLSVNSKGACPTKERADVKHLFSDYDFLVHKIDDDSSTRLSVGVHPSETKALTPLET 502
Query: 120 LLKEVESIITIICQKKLIELYKQKNLSELAEVSCVAVGAR 1
KEVE+I+ +ICQ++L+EL+ QK++ EL EV+CV V AR
Sbjct: 503 FQKEVENIVALICQERLVELHNQKSILELPEVNCVTVSAR 542