BLASTX nr result
ID: Cinnamomum24_contig00032819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00032819
(324 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010655546.1| PREDICTED: protein STICHEL-like 3 isoform X2... 77 4e-12
ref|XP_010655545.1| PREDICTED: protein STICHEL-like 3 isoform X1... 77 4e-12
ref|XP_002305724.2| hypothetical protein POPTR_0004s06030g [Popu... 65 3e-08
ref|XP_011039384.1| PREDICTED: protein STICHEL-like 3 [Populus e... 64 4e-08
ref|XP_002317391.1| hypothetical protein POPTR_0011s06860g [Popu... 60 5e-07
ref|XP_011010905.1| PREDICTED: protein STICHEL-like 3 [Populus e... 59 1e-06
ref|XP_010106622.1| DNA polymerase III subunit [Morus notabilis]... 56 9e-06
>ref|XP_010655546.1| PREDICTED: protein STICHEL-like 3 isoform X2 [Vitis vinifera]
Length = 1186
Score = 77.4 bits (189), Expect = 4e-12
Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRDSTT--RIEDLNA----DHAD 164
++S D SF+ SP+V N + +D+ RK N EMPN +R +T RIE L A D D
Sbjct: 814 SSSADTSFNHSPLVPNNASGRDMVRKGNDSHNEMPNTERSLSTNVRIEKLQAGSSGDIFD 873
Query: 165 DGYMKNNYISRKKH----VMALQTSVSSPDITKAS-EGYPGHGYKELEEIWFKVLEKM 323
+G MK++ I RKKH + Q+S S D + S + PG KE+EEIW +VLEK+
Sbjct: 874 NGMMKSSSIDRKKHAGSGMARQQSSAHSADTNRLSGKQIPGKVRKEIEEIWLEVLEKI 931
>ref|XP_010655545.1| PREDICTED: protein STICHEL-like 3 isoform X1 [Vitis vinifera]
Length = 1227
Score = 77.4 bits (189), Expect = 4e-12
Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRDSTT--RIEDLNA----DHAD 164
++S D SF+ SP+V N + +D+ RK N EMPN +R +T RIE L A D D
Sbjct: 814 SSSADTSFNHSPLVPNNASGRDMVRKGNDSHNEMPNTERSLSTNVRIEKLQAGSSGDIFD 873
Query: 165 DGYMKNNYISRKKH----VMALQTSVSSPDITKAS-EGYPGHGYKELEEIWFKVLEKM 323
+G MK++ I RKKH + Q+S S D + S + PG KE+EEIW +VLEK+
Sbjct: 874 NGMMKSSSIDRKKHAGSGMARQQSSAHSADTNRLSGKQIPGKVRKEIEEIWLEVLEKI 931
>ref|XP_002305724.2| hypothetical protein POPTR_0004s06030g [Populus trichocarpa]
gi|550340424|gb|EEE86235.2| hypothetical protein
POPTR_0004s06030g [Populus trichocarpa]
Length = 1089
Score = 64.7 bits (156), Expect = 3e-08
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRD--STTRIEDL----NADHAD 164
++ST+ SF+ SP+ N G +D+ RK GG+ EMPNN RD R+E L +AD +
Sbjct: 707 SSSTETSFNHSPLAQNNMGGRDISRK--GGEHEMPNNGRDLPMHVRLESLPGGTSADFRN 764
Query: 165 DGYMKNNYISRKKH---VMALQ-TSVSSPDITKA-SEGYPGHGYKELEEIWFKVLEKM 323
+G I RK++ VMA Q T V + D + S G +K EEIW +VLEK+
Sbjct: 765 NGSTNGTSIDRKRNAASVMAPQWTPVQTSDAIRVNSRQVSGKSHKGYEEIWLEVLEKI 822
>ref|XP_011039384.1| PREDICTED: protein STICHEL-like 3 [Populus euphratica]
Length = 1190
Score = 63.9 bits (154), Expect = 4e-08
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRDSTT--RIEDL----NADHAD 164
++ST+ SF+ SP+ +N +G +D+ RK G + EMPNNKR +T R+E+L +AD +
Sbjct: 810 SSSTETSFNHSPLALNDTGGRDIARK-GGERVEMPNNKRGLSTHVRLENLPGGTSADFRN 868
Query: 165 DGYMKNNYISRKKHV---MALQ-TSVSSPDITKAS-EGYPGHGYKELEEIWFKVLEKM 323
G + RK++ MA Q TSV + D + + G +K EEIW +VLEK+
Sbjct: 869 SGSTNGINMDRKRNATSGMASQWTSVQTSDAVQVNGRQVSGKSHKGHEEIWLEVLEKI 926
>ref|XP_002317391.1| hypothetical protein POPTR_0011s06860g [Populus trichocarpa]
gi|222860456|gb|EEE98003.1| hypothetical protein
POPTR_0011s06860g [Populus trichocarpa]
Length = 1190
Score = 60.5 bits (145), Expect = 5e-07
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRDSTT--RIEDL----NADHAD 164
++ST+ SF+ SP+ +N G +D+ RK G + EMPNNKR +T R+E+L +A+ +
Sbjct: 810 SSSTETSFNHSPLALNNMGGRDIARK-GGERVEMPNNKRGLSTHVRLENLPGGTSANFQN 868
Query: 165 DGYMKNNYISRKKHV---MALQ-TSVSSPDITKAS-EGYPGHGYKELEEIWFKVLEKM 323
G + RK++ MA Q TSV + D + + G K EEIW +VLEK+
Sbjct: 869 SGSTNGINMDRKRNAASGMASQWTSVQTSDAVRVNGRQVSGKSRKGHEEIWLEVLEKI 926
>ref|XP_011010905.1| PREDICTED: protein STICHEL-like 3 [Populus euphratica]
Length = 1188
Score = 59.3 bits (142), Expect = 1e-06
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRDST--TRIEDL----NADHAD 164
++ST+ SF+ SP+ N G +++ RK GG+ EMPNN RD R+E L +AD +
Sbjct: 806 SSSTETSFNHSPLAQNNMGGREISRK--GGEHEMPNNGRDLPMHVRLESLPGGTSADFRN 863
Query: 165 DGYMKNNYISRKK--------HVMALQTSVSSPDITKASEGYPGHGYKELEEIWFKVLEK 320
+G I RK+ H +QTS +I S G +K EEIW +VLEK
Sbjct: 864 NGSTSGISIDRKRNAASGMAPHWTPVQTS---DEIRVNSRQVSGKSHKGYEEIWLEVLEK 920
Query: 321 M 323
+
Sbjct: 921 I 921
>ref|XP_010106622.1| DNA polymerase III subunit [Morus notabilis]
gi|587923614|gb|EXC10952.1| DNA polymerase III subunit
[Morus notabilis]
Length = 1172
Score = 56.2 bits (134), Expect = 9e-06
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Frame = +3
Query: 3 NTSTDPSFSQSPMVINYSGEKDVPRKRNGGQTEMPNNKRDSTTRIEDL-NADHADDGYMK 179
++S D SF+QSP+ +N +G ++ RK G Q N++R + +D ++ MK
Sbjct: 738 SSSADTSFNQSPLALNNAGGRNAVRKA-GEQDHTTNSERGLSANTRQAGTSDLYNNALMK 796
Query: 180 NNYISRKKHVMA----LQTSVSSPDITKAS-EGYPGHGYKELEEIWFKVLEKM 323
+N + RK+H A QTS S D + + G K +EEIW +VL+K+
Sbjct: 797 DNSLDRKRHTGASMAPQQTSARSADTVRVNGNQVSGKSRKGIEEIWLEVLDKI 849