BLASTX nr result

ID: Cinnamomum24_contig00032802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00032802
         (496 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009786342.1| PREDICTED: protein FAF-like, chloroplastic [...    62   2e-07
ref|XP_004228872.1| PREDICTED: protein FAF-like, chloroplastic [...    60   5e-07
ref|XP_009591159.1| PREDICTED: protein FAF-like, chloroplastic [...    60   6e-07
gb|KHG29078.1| hypothetical protein F383_03861 [Gossypium arboreum]    57   4e-06
ref|XP_012446067.1| PREDICTED: protein FAF-like, chloroplastic [...    57   5e-06

>ref|XP_009786342.1| PREDICTED: protein FAF-like, chloroplastic [Nicotiana sylvestris]
          Length = 490

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
 Frame = -3

Query: 284 RKGIGSILDLRTEKRES----LRRTFSADMSSKKWLAQN------TTIXXXXXXXXXXXX 135
           ++GI SIL   +E+ +S    +RRTFSADMSSK+WLAQN        I            
Sbjct: 41  KQGIVSILGSESERGKSSAASIRRTFSADMSSKQWLAQNGFFSPMKKIASSKDLAVVSAA 100

Query: 134 XXXXXXDIWSSIPLQKTTNMN-SPFNAPYIHSLVKRSSISLGEKS 3
                 D+WSSI  +K  + + S    PYIH LVKRS+ SL EKS
Sbjct: 101 DHSSSLDVWSSILSKKKDDDDMSNLETPYIHPLVKRSTSSLSEKS 145


>ref|XP_004228872.1| PREDICTED: protein FAF-like, chloroplastic [Solanum lycopersicum]
          Length = 471

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 45/115 (39%), Positives = 53/115 (46%), Gaps = 20/115 (17%)
 Frame = -3

Query: 287 KRKGIGSILDLRTEKRES----LRRTFSADMSSKKWLAQN----------------TTIX 168
           K KGI SIL   T++ +S    +RR FSADMSSK+WL QN                 +  
Sbjct: 16  KTKGIVSILGSDTQRGKSNVTSIRRAFSADMSSKQWLTQNGFFSPIKKIASSKDLALSTS 75

Query: 167 XXXXXXXXXXXXXXXXXDIWSSIPLQKTTNMNSPFNAPYIHSLVKRSSISLGEKS 3
                             +WSSI  QK    N  F  PYIH LVKRS+ SL EKS
Sbjct: 76  SEEEEEEEKLERRKTSFGVWSSILSQK---KNDDFQTPYIHPLVKRSTSSLSEKS 127


>ref|XP_009591159.1| PREDICTED: protein FAF-like, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 533

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 44/104 (42%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
 Frame = -3

Query: 284 RKGIGSILDLRTEKRES----LRRTFSADMSSKKWLAQNTTI-----XXXXXXXXXXXXX 132
           ++GI SIL   +E+ +S    +RRTFSADMSSK+WLAQN                     
Sbjct: 25  KQGIVSILGSESERGKSSAPSIRRTFSADMSSKQWLAQNGFFSPMKKIASSKDLAVVSAT 84

Query: 131 XXXXXDIWSSIPLQKTTNMN-SPFNAPYIHSLVKRSSISLGEKS 3
                D+WSSI  +K  + + S    PYIH LVKRS+ SL EKS
Sbjct: 85  DHKSFDVWSSILSKKKDDDDMSNLETPYIHPLVKRSTSSLSEKS 128


>gb|KHG29078.1| hypothetical protein F383_03861 [Gossypium arboreum]
          Length = 499

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 43/108 (39%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
 Frame = -3

Query: 275 IGSILDLRTEKRESLRRTFSADMSSKKWLAQ-NTTI----------------XXXXXXXX 147
           +GS  D R  K  SLRRT SADMSSKKWL Q N T                         
Sbjct: 49  LGSDTDQRPTKGSSLRRTLSADMSSKKWLTQLNNTASSDELPVSIADSSSQEAEEENYQE 108

Query: 146 XXXXXXXXXXDIWSSIPLQKTTNMNSPFNAPYIHSLVKRSSISLGEKS 3
                     DIW+SI   K  + + P   PYIH LVKRS   L EKS
Sbjct: 109 KKALEKPAQFDIWTSIISSKPQDDSKPLPPPYIHPLVKRSGSCLSEKS 156


>ref|XP_012446067.1| PREDICTED: protein FAF-like, chloroplastic [Gossypium raimondii]
           gi|763788567|gb|KJB55563.1| hypothetical protein
           B456_009G082500 [Gossypium raimondii]
          Length = 485

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 45/116 (38%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
 Frame = -3

Query: 287 KRKGIGSIL----DLRTEKRESLRRTFSADMSSKKWLAQNTTI----------------- 171
           K++GI SIL    D R  K  SLRRT SADMSSKKWL Q + I                 
Sbjct: 27  KKQGIVSILGSDTDQRPTKGSSLRRTLSADMSSKKWLTQLSNIASSDELPVSIADSSSEE 86

Query: 170 XXXXXXXXXXXXXXXXXXDIWSSIPLQKTTNMNSPFNAPYIHSLVKRSSISLGEKS 3
                             DIW+SI   K  + +     PYIH LVKRS   L EKS
Sbjct: 87  AEEEDYQEKKALEKPAQFDIWTSIISSKPQDDSKSLPPPYIHPLVKRSGSCLSEKS 142


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