BLASTX nr result

ID: Cinnamomum24_contig00032380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00032380
         (331 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011458229.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|XP_011458234.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_008237768.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
ref|XP_007200169.1| hypothetical protein PRUPE_ppa016573mg [Prun...    67   7e-09
ref|XP_010091280.1| Pentatricopeptide repeat-containing protein ...    65   2e-08
ref|XP_010091279.1| hypothetical protein L484_002907 [Morus nota...    65   2e-08
ref|XP_007015025.1| Tetratricopeptide repeat-like superfamily pr...    64   4e-08
ref|XP_009366860.1| PREDICTED: pentatricopeptide repeat-containi...    64   6e-08
ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi...    63   8e-08
ref|XP_011004855.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_010274978.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Popu...    62   1e-07
ref|XP_008361359.1| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07
ref|XP_002525492.1| pentatricopeptide repeat-containing protein,...    60   5e-07
ref|XP_012080032.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_012444375.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
gb|KJB55372.1| hypothetical protein B456_009G072800 [Gossypium r...    58   2e-06
emb|CDX97514.1| BnaA05g25650D [Brassica napus]                         57   4e-06
ref|XP_012076873.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_011458229.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Fragaria vesca subsp. vesca]
           gi|764529807|ref|XP_011458230.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71420-like [Fragaria vesca subsp. vesca]
          Length = 792

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 34/57 (59%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLL---SQTYAALLHSCARHGALREGRALHSHMLACN 15
           L  +GQL EALSLFY+L+ PP L   +QTYA L H+CARH +LR+G +LH +MLA N
Sbjct: 79  LATRGQLNEALSLFYALQPPPSLIRCNQTYATLFHACARHNSLRQGLSLHHYMLAHN 135


>ref|XP_011458234.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           isoform X1 [Fragaria vesca subsp. vesca]
          Length = 283

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLL---SQTYAALLHSCARHGALREGRALHSHMLACN 15
           L  +GQL EAL+LFY+L+ PP L   +QTYA L H+CARH +LR+G +LH +MLA N
Sbjct: 36  LATRGQLNEALTLFYTLQPPPSLIRCNQTYATLFHACARHNSLRQGLSLHHYMLAHN 92


>ref|XP_008237768.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Prunus mume]
          Length = 755

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
 Frame = -3

Query: 266 ARRVCSSLAPSTLSQSLPPQ-NASTHLI---ILHLCQKGQLQEALSLFYSLKSPPLLSQT 99
           ARR+ S  A ST++   P   N  T+ +   +  L  +GQ++EALSLFY+L+ PP  +QT
Sbjct: 8   ARRI-SHRAFSTINLPTPSGLNLQTNNLLGEVRDLSTRGQVKEALSLFYTLQPPPHCNQT 66

Query: 98  YAALLHSCARHGALREGRALHSHMLA 21
           YA L H+CARH  + EG +LH +M+A
Sbjct: 67  YATLFHACARHHCIHEGLSLHHYMVA 92


>ref|XP_007200169.1| hypothetical protein PRUPE_ppa016573mg [Prunus persica]
           gi|462395569|gb|EMJ01368.1| hypothetical protein
           PRUPE_ppa016573mg [Prunus persica]
          Length = 755

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
 Frame = -3

Query: 266 ARRVCSSLAPSTLSQSLPPQ-NASTHLI---ILHLCQKGQLQEALSLFYSLKSPPLLSQT 99
           ARR+ S  A ST++   P   N  T+ +   +  L  +GQ++EALSLFY+L+ PP  +QT
Sbjct: 8   ARRI-SHRAFSTINLPTPSGLNLQTNNLLGEVRDLSTRGQIKEALSLFYTLQPPPHCNQT 66

Query: 98  YAALLHSCARHGALREGRALHSHMLA 21
           YA L H+CARH  + EG +LH +M+A
Sbjct: 67  YATLFHACARHLCIHEGLSLHHYMVA 92


>ref|XP_010091280.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
           gi|587854128|gb|EXB44216.1| Pentatricopeptide
           repeat-containing protein [Morus notabilis]
          Length = 822

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -3

Query: 263 RRVCSSLAPSTLSQSLPPQNASTHLIILHLCQKGQLQEALSLFYSL-----KSPPLLSQT 99
           RR  S   P TLS+  P  +     + + L  +G+L+EALSLFY++     K  P   QT
Sbjct: 14  RRFSSGNLP-TLSRLTPEADNLLDRVRV-LATRGRLKEALSLFYAIIEADDKPRPHCHQT 71

Query: 98  YAALLHSCARHGALREGRALHSHMLACN 15
           YA L H CARHG LREG  LH HM+A N
Sbjct: 72  YATLFHECARHGRLREGLCLHRHMVAHN 99


>ref|XP_010091279.1| hypothetical protein L484_002907 [Morus notabilis]
           gi|587854127|gb|EXB44215.1| hypothetical protein
           L484_002907 [Morus notabilis]
          Length = 741

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = -3

Query: 263 RRVCSSLAPSTLSQSLPPQNASTHLIILHLCQKGQLQEALSLFYSL-----KSPPLLSQT 99
           RR  S   P TLS+  P  +     + + L  +G+L+EALSLFY++     K  P   QT
Sbjct: 14  RRFSSGNLP-TLSRLTPEADNLLDRVRV-LATRGRLKEALSLFYAIIEADEKPRPHCHQT 71

Query: 98  YAALLHSCARHGALREGRALHSHMLACN 15
           YA L H CARHG LREG  LH HM+A N
Sbjct: 72  YATLFHECARHGRLREGLCLHRHMVAHN 99


>ref|XP_007015025.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508785388|gb|EOY32644.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 741

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = -3

Query: 227 SQSLPPQNASTHLI--ILHLCQKGQLQEALSLFYSLKSPPLL--SQTYAALLHSCARHGA 60
           S  LP  N   +L+  +  L  +GQLQEALSLFY+  +PP L   QTYA+L H CARHG 
Sbjct: 19  SNLLPASNEPNNLLNKVRLLASRGQLQEALSLFYN--TPPELHSRQTYASLFHECARHGY 76

Query: 59  LREGRALHSHMLA 21
           L++G  LH  MLA
Sbjct: 77  LQQGLHLHHFMLA 89


>ref|XP_009366860.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Pyrus x bretschneideri]
          Length = 757

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSP-PLLSQTYAALLHSCARHGALREGRALHSHMLACN 15
           L  +G LQEALSLFYSL  P P   QTYA L H+CARH  L++G +LH +M+A N
Sbjct: 42  LATRGHLQEALSLFYSLHPPRPHCPQTYATLFHACARHRRLQDGLSLHRYMIAHN 96


>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLL---SQTYAALLHSCARHGALREGRALHSHMLACN 15
           LC +G LQEAL LFYS+  PP L     TYAAL  +CAR  +L EG+ALH HM   N
Sbjct: 37  LCSRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHN 93


>ref|XP_011004855.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Populus euphratica]
          Length = 750

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/87 (39%), Positives = 48/87 (55%)
 Frame = -3

Query: 275 DRWARRVCSSLAPSTLSQSLPPQNASTHLIILHLCQKGQLQEALSLFYSLKSPPLLSQTY 96
           D + R   SS+ P   + S  P+       +  L  +G ++EALS FYS        QTY
Sbjct: 10  DLFLRSFSSSIHPQLPNSS--PEATDLFNKVRVLSTRGNIKEALSFFYSTPKLNQSQQTY 67

Query: 95  AALLHSCARHGALREGRALHSHMLACN 15
           A L H+CARHG L++G+ LH HM++ N
Sbjct: 68  ATLFHACARHGNLKQGQYLHQHMISKN 94


>ref|XP_010274978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Nelumbo nucifera]
          Length = 717

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLLSQTYAALLHSCARHGALREGRALHSHMLACNYK 9
           LC +G  ++ALSLFYSL +P   SQ YA L H+C+R G L EGR LH HML  N++
Sbjct: 13  LCTQGHFRDALSLFYSLNTPH--SQVYAILFHACSRLGYLDEGRRLHQHMLDHNHE 66


>ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Populus trichocarpa]
           gi|550325453|gb|ERP53980.1| hypothetical protein
           POPTR_0013s10600g [Populus trichocarpa]
          Length = 636

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLLSQTYAALLHSCARHGALREGRALHSHMLACNYK 9
           L  +G ++EALS FYS        QTYA L H+CARHG L++G+ LH HM++ N+K
Sbjct: 41  LSTRGNIKEALSFFYSTPQLNQSQQTYATLFHACARHGNLKQGQYLHQHMISENHK 96


>ref|XP_008361359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Malus domestica]
          Length = 757

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPL-LSQTYAALLHSCARHGALREGRALHSHMLACN 15
           L  +G LQEALSLFYSL  PP    QTYA L H C RH  L++G +LH +M+A N
Sbjct: 42  LATRGHLQEALSLFYSLHPPPPHCPQTYATLFHVCVRHRXLQDGLSLHRYMIAHN 96


>ref|XP_002525492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535171|gb|EEF36850.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 542

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSP-PLLSQTYAALLHSCARHGALREGRALHSHMLACN 15
           L  +GQ+ EALSLFY+   P P   QTYA L H+CARHG L++G  LH H+L  N
Sbjct: 37  LSTRGQIDEALSLFYNAPLPLPHSQQTYATLFHACARHGYLQQGIYLHQHLLLNN 91


>ref|XP_012080032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Jatropha curcas]
           gi|643739903|gb|KDP45589.1| hypothetical protein
           JCGZ_17196 [Jatropha curcas]
          Length = 348

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = -3

Query: 263 RRVCSSLAPSTLSQSLPPQNASTHLIILHLCQKGQLQEALSLFYSLKSPPLL---SQTYA 93
           R   SS  P   S +    N    L +L +  +G++ EALSLFY+  SPP L     TY 
Sbjct: 14  RTFSSSSLPQYWSATSNANNLLNELRVLSM--RGRVNEALSLFYNAPSPPPLPYSQYTYT 71

Query: 92  ALLHSCARHGALREGRALHSHMLACNY 12
            L ++ ARHG L+EG  LH HML+ N+
Sbjct: 72  TLFNAFARHGYLQEGILLHQHMLSTNH 98


>ref|XP_012444375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Gossypium raimondii]
          Length = 754

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLLS-QTYAALLHSCARHGALREGRALHSHMLA 21
           L  +GQL +ALSLFY+  SP L S QTYA L H CARHG L++G  LH  MLA
Sbjct: 50  LSSRGQLHQALSLFYN-SSPQLHSLQTYATLFHECARHGYLQQGLRLHHFMLA 101


>gb|KJB55372.1| hypothetical protein B456_009G072800 [Gossypium raimondii]
          Length = 744

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = -3

Query: 176 LCQKGQLQEALSLFYSLKSPPLLS-QTYAALLHSCARHGALREGRALHSHMLA 21
           L  +GQL +ALSLFY+  SP L S QTYA L H CARHG L++G  LH  MLA
Sbjct: 40  LSSRGQLHQALSLFYN-SSPQLHSLQTYATLFHECARHGYLQQGLRLHHFMLA 91


>emb|CDX97514.1| BnaA05g25650D [Brassica napus]
          Length = 626

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/72 (44%), Positives = 41/72 (56%)
 Frame = -3

Query: 221 SLPPQNASTHLIILHLCQKGQLQEALSLFYSLKSPPLLSQTYAALLHSCARHGALREGRA 42
           S P     T L I HLC  G+LQEAL L  S+  P +    Y ALL++C    ALREG+ 
Sbjct: 14  SFPNSTLQTFLPITHLCSNGRLQEAL-LEMSVLGPNMGFHDYDALLNTCVNKRALREGQR 72

Query: 41  LHSHMLACNYKP 6
           +H+HM+   Y P
Sbjct: 73  VHAHMIKTLYFP 84


>ref|XP_012076873.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420
           [Jatropha curcas]
          Length = 750

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = -3

Query: 263 RRVCSSLAPSTLSQSLPPQNASTHLIILHLCQKGQLQEALSLFYSLKSPPLL---SQTYA 93
           R   SS  P   S +    N    L +L +  +G++ EALSLFY+  S P L     +Y 
Sbjct: 14  RTFSSSSLPQYWSTTSNANNLLNELRVLSM--RGRVNEALSLFYNAPSLPPLPYSQYSYT 71

Query: 92  ALLHSCARHGALREGRALHSHMLACNY 12
           +L ++CARHG L+EG  LH HML  N+
Sbjct: 72  SLFNACARHGYLQEGILLHQHMLFTNH 98


>ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial [Cucumis sativus]
           gi|700203811|gb|KGN58944.1| hypothetical protein
           Csa_3G736910 [Cucumis sativus]
          Length = 792

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -3

Query: 293 HGLLSHDRWARRVCSSLAPSTLSQSLPPQNASTHLIILHLCQKGQLQEALS---LFYSLK 123
           H  LSH R   ++  S  P T+      +       I+ LC+K   +EAL    +F    
Sbjct: 40  HLALSHIRLNTQLAFSPCPLTVHYPHDDK-------IISLCKKNLHREALKAFDIFQKCS 92

Query: 122 SPPLLSQTYAALLHSCARHGALREGRALHSHMLACNYKP 6
           S PL S TY  L+++C+   +L  GR +H HML CNY+P
Sbjct: 93  SSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQP 131


Top