BLASTX nr result

ID: Cinnamomum24_contig00032308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00032308
         (355 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010271074.1| PREDICTED: transcription factor PIF3 isoform...    85   2e-14
ref|XP_010271069.1| PREDICTED: transcription factor PIF3 isoform...    85   2e-14
ref|XP_010240811.1| PREDICTED: transcription factor PIF3-like is...    74   6e-11
ref|XP_010240809.1| PREDICTED: transcription factor PIF3-like is...    74   6e-11
ref|XP_010659765.1| PREDICTED: transcription factor PIF3-like is...    60   8e-07
ref|XP_010659764.1| PREDICTED: transcription factor PIF3-like is...    60   8e-07
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]    60   8e-07

>ref|XP_010271074.1| PREDICTED: transcription factor PIF3 isoform X2 [Nelumbo nucifera]
          Length = 734

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTDSSNNS-QVGIDGNVVSAHNSRIQEHRN 174
           DSLQ DY +E F+EL G N+N  S QSN++  D ++   Q+G D  +VSAH  +  EH N
Sbjct: 123 DSLQHDYCSELFSELAGVNVNVLSAQSNSLPIDKNHGCVQMGKDSQIVSAHVGKNSEHGN 182

Query: 173 PSEVVVGVSEPTRIGS--IQSSSAKQGQTSVSHLRPRVSEFITNN 45
            S+ V G  E +R  S  + SSS +QGQTS+   RPRVS+FI  N
Sbjct: 183 VSKGVGGGPEVSRTSSSLLCSSSLQQGQTSLPTTRPRVSDFINTN 227


>ref|XP_010271069.1| PREDICTED: transcription factor PIF3 isoform X1 [Nelumbo nucifera]
           gi|720048271|ref|XP_010271070.1| PREDICTED:
           transcription factor PIF3 isoform X1 [Nelumbo nucifera]
           gi|720048274|ref|XP_010271071.1| PREDICTED:
           transcription factor PIF3 isoform X1 [Nelumbo nucifera]
           gi|720048277|ref|XP_010271072.1| PREDICTED:
           transcription factor PIF3 isoform X1 [Nelumbo nucifera]
          Length = 738

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTDSSNNS-QVGIDGNVVSAHNSRIQEHRN 174
           DSLQ DY +E F+EL G N+N  S QSN++  D ++   Q+G D  +VSAH  +  EH N
Sbjct: 123 DSLQHDYCSELFSELAGVNVNVLSAQSNSLPIDKNHGCVQMGKDSQIVSAHVGKNSEHGN 182

Query: 173 PSEVVVGVSEPTRIGS--IQSSSAKQGQTSVSHLRPRVSEFITNN 45
            S+ V G  E +R  S  + SSS +QGQTS+   RPRVS+FI  N
Sbjct: 183 VSKGVGGGPEVSRTSSSLLCSSSLQQGQTSLPTTRPRVSDFINTN 227


>ref|XP_010240811.1| PREDICTED: transcription factor PIF3-like isoform X2 [Nelumbo
           nucifera]
          Length = 740

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTD-SSNNSQVGIDGNVVSAHNSRIQEHRN 174
           DSLQ DY +EFF+ELTG NLN+ S Q+N+   D +S+  Q+  D N+ S +  +     N
Sbjct: 124 DSLQHDYCSEFFSELTGVNLNALSTQNNSFPIDKNSSCGQISRDLNIASVYFDK-NPQGN 182

Query: 173 PSEVVVGVSEPTRIGS--IQSSSAKQGQTSVSHLRPRVSEFITNN 45
            S+ V G  EP R  S  ++SSS +Q Q S+  LRPRVS+ I +N
Sbjct: 183 ASKGVGGNPEPIRPSSNQLRSSSLQQCQISLPSLRPRVSDLINSN 227


>ref|XP_010240809.1| PREDICTED: transcription factor PIF3-like isoform X1 [Nelumbo
           nucifera]
          Length = 744

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTD-SSNNSQVGIDGNVVSAHNSRIQEHRN 174
           DSLQ DY +EFF+ELTG NLN+ S Q+N+   D +S+  Q+  D N+ S +  +     N
Sbjct: 124 DSLQHDYCSEFFSELTGVNLNALSTQNNSFPIDKNSSCGQISRDLNIASVYFDK-NPQGN 182

Query: 173 PSEVVVGVSEPTRIGS--IQSSSAKQGQTSVSHLRPRVSEFITNN 45
            S+ V G  EP R  S  ++SSS +Q Q S+  LRPRVS+ I +N
Sbjct: 183 ASKGVGGNPEPIRPSSNQLRSSSLQQCQISLPSLRPRVSDLINSN 227


>ref|XP_010659765.1| PREDICTED: transcription factor PIF3-like isoform X2 [Vitis
           vinifera]
          Length = 707

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTDSSN-NSQVGIDGNVVSAHNSRIQEHRN 174
           +SLQ DY ++F  EL+G  +N  S   N    +  N N+Q   D N +SAHN    E  N
Sbjct: 120 ESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGN 179

Query: 173 PSEVVVGVSEPTRIGSIQ--SSSAKQGQTSVSHLRPRVSEFITNNDS 39
            S+      EP+R  S Q    S++Q QT    +R +VS+ I+NN S
Sbjct: 180 ASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTS 226


>ref|XP_010659764.1| PREDICTED: transcription factor PIF3-like isoform X1 [Vitis
           vinifera]
          Length = 709

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTDSSN-NSQVGIDGNVVSAHNSRIQEHRN 174
           +SLQ DY ++F  EL+G  +N  S   N    +  N N+Q   D N +SAHN    E  N
Sbjct: 120 ESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGN 179

Query: 173 PSEVVVGVSEPTRIGSIQ--SSSAKQGQTSVSHLRPRVSEFITNNDS 39
            S+      EP+R  S Q    S++Q QT    +R +VS+ I+NN S
Sbjct: 180 ASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTS 226


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = -3

Query: 350 DSLQSDYFAEFFTELTGTNLNSPSVQSNAIVTDSSN-NSQVGIDGNVVSAHNSRIQEHRN 174
           +SLQ DY ++F  EL+G  +N  S   N    +  N N+Q   D N +SAHN    E  N
Sbjct: 120 ESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGN 179

Query: 173 PSEVVVGVSEPTRIGSIQ--SSSAKQGQTSVSHLRPRVSEFITNNDS 39
            S+      EP+R  S Q    S++Q QT    +R +VS+ I+NN S
Sbjct: 180 ASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTS 226


Top