BLASTX nr result

ID: Cinnamomum24_contig00030780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00030780
         (325 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010248466.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10

>ref|XP_010248466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Nelumbo nucifera]
          Length = 589

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = +3

Query: 144 HCHSTPQTQHFCNSYTQLLRSHPQTRPIQQIHARIVVEGSSRTSFSATHLVKSYAKAGYL 323
           H H+  +++    SYT++L+ H  +R ++QIHARI++EGSS  SF ATHLVKSYAKAG L
Sbjct: 31  HIHAIQESEDPSTSYTRILQCHASSREVEQIHARIIIEGSSWDSFYATHLVKSYAKAGNL 90


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